NO07G00220, NO07G00220 (gene) Nannochloropsis oceanica

Overview
NameNO07G00220
Unique NameNO07G00220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4326
Alignment locationchr7:95609..99934 -

Link to JBrowse

Properties
Property NameValue
DescriptionLectin, mannose-binding 2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:95609..99934 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom
IPR005052Lectin_leg
Homology
[Close]
BLAST of NO07G00220 vs. NCBI_GenBank
Match: EWM27367.1 (mannose-binding 2 [Nannochloropsis gaditana])

HSP 1 Score: 490.3 bits (1261), Expect = 6.200e-135
Identity = 229/288 (79.51%), Postives = 256/288 (88.89%), Query Frame = 0 
Query:   23 LVVACLMALATMMVG-VGGEMMEAHTFIAPFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLGVDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVGVAFDTFKNTEHGARHRDVAVFINDGSRSREDVIGGFDGCDASLRYHGERADFSVTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLRKAHLGLTATTGQLADNHDVISLHTFNDLGLHPEADELVVTPKFGRGVDISVEERLDRVE 310
            LV  C +A    M+G V GE+M +H+F APFNDVQVDGKR VS+DW+  GETQVNQNFVRLTPDRQSK GALWSH  LGVDA T TLKFR+HGQGKKFFGDGI FW+ ++PYW EGD+HGVSHAF GVGVAFDTF+NTEHG RHRDVAVF+N+G RSRE+V+ GFDGCDAS+RYHGERADFSVTNSSRAK+T+EG T SVQIDPRG GNWFQCTTVDL+ YNLPE+WLRKAH+GLT TTGQLADNHDVISLHTFNDL +HPEAD+L+VTPKFGRGVD+SVEERLDRVE
Sbjct:   17 LVWMCCLA----MIGIVSGELMLSHSFSAPFNDVQVDGKRFVSRDWSPAGETQVNQNFVRLTPDRQSKIGALWSHKALGVDAVTMTLKFRIHGQGKKFFGDGIGFWVMESPYWQEGDLHGVSHAFVGVGVAFDTFRNTEHGTRHRDVAVFVNNGDRSREEVLTGFDGCDASIRYHGERADFSVTNSSRAKLTIEGNTLSVQIDPRGQGNWFQCTTVDLSTYNLPEHWLRKAHVGLTGTTGQLADNHDVISLHTFNDLDVHPEADDLIVTPKFGRGVDLSVEERLDRVE 300
[Close]
BLAST of NO07G00220 vs. NCBI_GenBank
Match: XP_008875912.1 (hypothetical protein H310_11132 [Aphanomyces invadans] >ETV95211.1 hypothetical protein H310_11132 [Aphanomyces invadans])

HSP 1 Score: 235.3 bits (599), Expect = 3.600e-58
Identity = 113/259 (43.63%), Postives = 166/259 (64.09%), Query Frame = 0 
Query:   21 VILVVACLMALATMMVGVGGEMMEAHTFIAPFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLGVDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVGVAFDTFKNTEHGARHRDVAVFINDGSRSREDVIGGFD-GCDASLRYHGERADFS-VTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLRKAHLGLTATTGQLADNHDVISLHTFND 278
            V +++ACL+A       +    ++AH+F APF  +   GKR+V+  WT+GG T+V  NF+RLTPDRQSK G +W++ PL  + F+A L+FR+ GQG+K+FGDGI  W+T +P+  +GD HG    + GVG+  DTF N+EH   H+DV + INDG+++ E +      GCDA+LRYH + A F  V +SSR +V ++G    +++D +    W  C   DL    LP +WL+   LG+T +TG LADNHD++S   F+D
Sbjct:    3 VHVILACLLAFVLECASI---KLDAHSFAAPFKTIDRTGKRIVNSTWTNGGSTEVFTNFIRLTPDRQSKHGHVWNNAPLQRNTFSAVLQFRISGQGQKWFGDGIGLWLTNSPHHEDGDNHGFKDKYFGVGIIIDTFVNSEHKGGHKDVTIQINDGTKTTEVLQDETKIGCDAALRYHEDSAHFDPVFSSSRLRVVVDGVKLKLEVDAKSTAEWKSCYEGDLP---LPSDWLQNVSLGITGSTGGLADNHDILSFLAFSD 255
[Close]
BLAST of NO07G00220 vs. NCBI_GenBank
Match: ETI53897.1 (hypothetical protein F443_03242 [Phytophthora parasitica P1569] >ETL47126.1 hypothetical protein L916_03093 [Phytophthora parasitica] >ETO82532.1 hypothetical protein F444_03309 [Phytophthora parasitica P1976])

HSP 1 Score: 231.1 bits (588), Expect = 6.800e-57
Identity = 115/264 (43.56%), Postives = 160/264 (60.61%), Query Frame = 0 
Query:   22 ILVVACLMALATMMVGVGGEMMEAHTFIAPFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLGVDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVGVAFDTFKNTEHGARHRDVAVFINDGSRSREDVIG-GFDGCDASLRYHGERADFS-VTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLRKAHLGLTATTGQLADNHDVISLHTF---NDLGL 281
            +L  A L +LAT    V    ++A TF  P+  V  DG+R +S D   GG T+V +NF+RLTPDRQSKRG +WS + +  D     + +R+HGQGKK+FGDGI  W T  P W  GD HG +  +TG G+  DTF N EH   H+DV + +NDG++  +D+      GCDA+ RYH   A+F  V +SSR +V ++G    V +DP   G W +C   +L   N   +WLR+A  G++A+TG LADNHD++ + +F   ND GL
Sbjct:    8 LLSAAALSSLAT----VSAAPLQALTFKQPYEVVDSDGRRQISDDIIYGGTTEVKKNFIRLTPDRQSKRGHIWSKSSINRDELATVITYRIHGQGKKWFGDGIGLWFTHEPQWKNGDNHGFTDKYTGFGIVLDTFHNVEHRGGHKDVTIQVNDGTKRLDDLNDENKIGCDAAFRYHSNSANFDPVYSSSRIRVKIKGIALEVDVDPNNTGTWTECYKGNLPFQN---DWLRRATFGISASTGALADNHDILRVQSFDQTNDAGL 264
[Close]
BLAST of NO07G00220 vs. NCBI_GenBank
Match: XP_008900444.1 (hypothetical protein PPTG_07827 [Phytophthora parasitica INRA-310] >ETK93748.1 hypothetical protein L915_03122 [Phytophthora parasitica] >ETM00239.1 hypothetical protein L917_03022 [Phytophthora parasitica] >ETM53433.1 hypothetical protein L914_03096 [Phytophthora parasitica] >ETN14175.1 hypothetical protein PPTG_07827 [Phytophthora parasitica INRA-310] >ETP23668.1 hypothetical protein F441_03228 [Phytophthora parasitica CJ01A1] >ETP51683.1 hypothetical protein F442_03223 [Phytophthora parasitica P10297] >KUF76813.1 VIP36 protein [Phytophthora nicotianae])

HSP 1 Score: 231.1 bits (588), Expect = 6.800e-57
Identity = 115/264 (43.56%), Postives = 160/264 (60.61%), Query Frame = 0 
Query:   22 ILVVACLMALATMMVGVGGEMMEAHTFIAPFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLGVDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVGVAFDTFKNTEHGARHRDVAVFINDGSRSREDVIG-GFDGCDASLRYHGERADFS-VTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLRKAHLGLTATTGQLADNHDVISLHTF---NDLGL 281
            +L  A L +LAT    V    ++A TF  P+  V  DG+R +S D   GG T+V +NF+RLTPDRQSKRG +WS + +  D     + +R+HGQGKK+FGDGI  W T  P W  GD HG +  +TG G+  DTF N EH   H+DV + +NDG++  +D+      GCDA+ RYH   A+F  V +SSR +V ++G    V +DP   G W +C   +L   N   +WLR+A  G++A+TG LADNHD++ + +F   ND GL
Sbjct:    8 LLSAAALSSLAT----VSAAPLQALTFKQPYEVVNSDGRRQISDDIIYGGTTEVKKNFIRLTPDRQSKRGHIWSKSSINRDELATVITYRIHGQGKKWFGDGIGLWFTHEPQWKNGDNHGFTDKYTGFGIVLDTFHNVEHRGGHKDVTIQVNDGTKRLDDLNDENKIGCDAAFRYHSNSANFDPVYSSSRIRVKIKGIALEVDVDPNNTGTWTECYKGNLPFQN---DWLRRATFGISASTGALADNHDILRVQSFDQTNDAGL 264
[Close]
BLAST of NO07G00220 vs. NCBI_GenBank
Match: XP_002901232.1 (lectin, putative [Phytophthora infestans T30-4] >EEY59218.1 lectin, putative [Phytophthora infestans T30-4])

HSP 1 Score: 229.2 bits (583), Expect = 2.600e-56
Identity = 114/264 (43.18%), Postives = 159/264 (60.23%), Query Frame = 0 
Query:   22 ILVVACLMALATMMVGVGGEMMEAHTFIAPFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLGVDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVGVAFDTFKNTEHGARHRDVAVFINDGSRSREDVIG-GFDGCDASLRYHGERADFS-VTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLRKAHLGLTATTGQLADNHDVISLHTF---NDLGL 281
            ++  A L  LATM        ++A T+  P+  V  DG+R +S D   GG T+V +NF+RLTPDRQSKRG +WS + +  D     + +R+HGQGKK+FGDGI  W T  P W  GD HG    +TG G+  DTF N EH   H+DV + INDG++  +D+      GCDA+ RYH   A+F  V +SSR ++ ++G    V +DP   G W +C   +L   N   +WLR+A LG++A+TG LADNHD++ + +F   ND GL
Sbjct:   10 LMSAAALSFLATM----SAAPLQALTYKQPYEVVDSDGRRQISDDIIFGGTTEVKKNFIRLTPDRQSKRGHIWSKSSINRDELATVITYRIHGQGKKWFGDGIGLWFTHEPQWKNGDNHGFIDKYTGFGIVLDTFHNVEHRGGHKDVTIQINDGTKRLDDLNDENKIGCDAAFRYHSNSANFDPVYSSSRIRIKIKGNALEVDVDPNNTGTWTECHKGNLPFQN---DWLRRATLGISASTGALADNHDILRVQSFDQTNDAGL 266
[Close]
BLAST of NO07G00220 vs. NCBI_GenBank
Match: XP_009844774.1 (hypothetical protein H257_17608 [Aphanomyces astaci] >ETV65722.1 hypothetical protein H257_17608 [Aphanomyces astaci])

HSP 1 Score: 228.0 bits (580), Expect = 5.700e-56
Identity = 111/259 (42.86%), Postives = 162/259 (62.55%), Query Frame = 0 
Query:   21 VILVVACLMALATMMVGVGGEMMEAHTFIAPFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLGVDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVGVAFDTFKNTEHGARHRDVAVFINDGSRSREDVIGGFD-GCDASLRYHGERADFS-VTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLRKAHLGLTATTGQLADNHDVISLHTFND 278
            V   +ACL+ALA   +      +E H+F  PF  +   GKR+V+  W+ GG T+V +NF+RLTPDRQSK G +W+  PLG + F+A L+FR+ GQGKK+FGDGI  W+T  P   +GD HG    + GVG+  DTF N+EH   H+DV + INDG+++ + +      GCDA+LR+H E A F  V +SSR ++ ++G    +++D +    W  C   DL    LP +WL+   +G+T +TG LADNHDV+   +F++
Sbjct:    3 VQFALACLLALA---LECTSSKLEQHSFSGPFKTLDRAGKRIVNSTWSHGGSTEVLKNFIRLTPDRQSKHGNVWNTAPLGRNTFSAVLQFRISGQGKKWFGDGIGLWLTHTPTHEDGDNHGFKDQYVGVGIVIDTFVNSEHKGGHKDVTIQINDGTKTTDTLQDETKIGCDAALRFHEESAHFDPVFSSSRLRIVVDGVKLKLEVDAKSTSEWKPCYEGDLP---LPSDWLQDVTVGITGSTGGLADNHDVLGFLSFSE 255
[Close]
BLAST of NO07G00220 vs. NCBI_GenBank
Match: XP_008616504.1 (hypothetical protein SDRG_12219 [Saprolegnia diclina VS20] >EQC29937.1 hypothetical protein SDRG_12219 [Saprolegnia diclina VS20])

HSP 1 Score: 223.8 bits (569), Expect = 1.100e-54
Identity = 109/253 (43.08%), Postives = 159/253 (62.85%), Query Frame = 0 
Query:   28 LMALATMMVGV-GGEMMEAHTFIAPFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLGVDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVGVAFDTFKNTEHGARHRDVAVFINDGSRSREDVIGGFD-GCDASLRYHGERADF-SVTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLRKAHLGLTATTGQLADNHDVISLHTFND 278
            L+ L   +VG+  G  +++H+F  PF  V   G R ++  WT+GG  +V ++FVRLTPDRQ++ G +WS + LG D+F+A ++FR+ G GKK+FGDGI  W+T +PY   G  HG+  AF GVG+  DTF N EH   H+DV + INDG+++   +      GCD + RYH +  +F +V ++SR ++T+E     V+IDP+    W  C    L    LP NWL  A +GLT +TG LADNHDV+S  +F++
Sbjct:    4 LLVLLAAIVGLASGVALQSHSFRPPFTKVDYQGVRFINDTWTTGGTAEVMKSFVRLTPDRQNRNGHVWSRDALGRDSFSAVMQFRISGTGKKWFGDGIGLWLTTSPY-VRGSNHGIDAAFNGVGIVIDTFVNPEHKGGHKDVTIQINDGTKTLATLQDETKIGCDGAFRYHEDSDEFDAVYSASRLRLTIERNNIKVEIDPKSKAEWTACYEGQLP---LPANWLETARVGLTGSTGGLADNHDVLSFLSFSE 252
[Close]
BLAST of NO07G00220 vs. NCBI_GenBank
Match: XP_009520185.1 (hypothetical protein PHYSODRAFT_539858 [Phytophthora sojae] >EGZ24897.1 hypothetical protein PHYSODRAFT_539858 [Phytophthora sojae])

HSP 1 Score: 221.1 bits (562), Expect = 7.000e-54
Identity = 106/254 (41.73%), Postives = 152/254 (59.84%), Query Frame = 0 
Query:   32 ATMMVGVGGEMMEAHTFIAPFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLGVDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVGVAFDTFKNTEHGARHRDVAVFINDGSRSREDVIG-GFDGCDASLRYHGERADFS-VTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLRKAHLGLTATTGQLADNHDVISLHTF---NDLGL 281
            A  +  V    +   TF  P+  V  DG+R ++     GG T+V +NF+RLTPDRQSKRG +W+ + +  D     + +R+HGQGKK+FGDGI  W T  P W  GD HG +  + G G+  DTF N EH   H+DV + +NDG++  +D+      GCDA+ RYH   A+F  V +SSR +V ++GT   V +DP   G W +C   +L P+    +WLR+A  G++A+TG LADNHD++ + +F   ND GL
Sbjct:   11 AAALSAVSAAPLPGMTFKQPYEVVDSDGRRQIADGVLYGGNTEVKKNFIRLTPDRQSKRGHIWTKSSVDRDELATVITYRIHGQGKKWFGDGIGLWFTHEPQWKNGDNHGFTDKYVGFGIVLDTFHNVEHRGGHKDVTIQVNDGTKRLDDLNDENKIGCDAAFRYHANSANFDPVYSSSRIRVKIKGTALEVDVDPNNAGTWTECYRGNL-PFQ--SDWLRRATFGISASTGALADNHDILRVQSFDQINDAGL 261
[Close]
BLAST of NO07G00220 vs. NCBI_GenBank
Match: OWZ01833.1 (Lectin [Phytophthora megakarya])

HSP 1 Score: 220.3 bits (560), Expect = 1.200e-53
Identity = 105/256 (41.02%), Postives = 154/256 (60.16%), Query Frame = 0 
Query:   30 ALATMMVGVGGEMMEAHTFIAPFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLGVDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVGVAFDTFKNTEHGARHRDVAVFINDGSRSREDVIG-GFDGCDASLRYHGERADFS-VTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLRKAHLGLTATTGQLADNHDVISLHTF---NDLGL 281
            A  T +V V    +++ TF  P+ +V  DG+R +S     GG T+V +NF+RLTPDRQSKRG +W+   +        + +R+HGQGKK+FGDG+  W T   +W  GD HG +  +TG G+  DTF N EH   H+DV + +NDG++  +D+      GCDA+ RYH   A+F  V +SSR ++ ++G    V +DP   G+W +C   +L   N   +WLR +  G++A+TG LADNHD++ + TF   ND GL
Sbjct:   12 AALTSLVAVSAVPLQSMTFKQPYEEVNSDGQRQISDSVLYGGTTEVKKNFIRLTPDRQSKRGHIWTKGFIDRGEIATVITYRIHGQGKKWFGDGVGLWFTSEQHWKNGDNHGFTDKYTGFGIILDTFHNVEHRGGHKDVTIQVNDGTKRLDDLNDENKIGCDAAFRYHSNSANFDPVYSSSRIRIKVKGNALEVDMDPNNTGSWTECYKGNLPFQN---DWLRLSTFGISASTGALADNHDILRVQTFDQTNDAGL 264
[Close]
BLAST of NO07G00220 vs. NCBI_GenBank
Match: GAX98455.1 (lectin, putative [Pythium insidiosum])

HSP 1 Score: 220.3 bits (560), Expect = 1.200e-53
Identity = 118/281 (41.99%), Postives = 166/281 (59.07%), Query Frame = 0 
Query:   23 LVVACLMALATMMVGVGGEMMEAHTFIAPFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLGVDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVGVAFDTFKNTEHGARHRDVAVFINDGSRSREDVIGGFD-GCDASLRYHGERADFS-VTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLRKAHLGLTATTGQLADNHDVISLHTF---NDLGLHPEADELVVTPKFGRGVD 299
            L+ A L+ L  +++     +   H     F+ V   GKR++S+D+  GG T+V +NF+RLTPDRQSKRG +WS   +  D     L +R+HGQG+K+FGDG+A W+T       GD HG    F GVG+  DTF N EH   H+DV + INDG ++ +D+      GCDA+ RYH   A F  V ++SR +V +E T  +V +DPR  G W  C   +L P++   +WLR+A +GLTA+TG LADNHDV+ L  F   +D G+   AD  V T  + +  D
Sbjct:  412 LMNALLLLLPVLLL-----LTALHAQAERFDKVDNTGKRIISEDFVYGGTTEVKRNFIRLTPDRQSKRGYIWSRRQIDKDELELVLSYRIHGQGRKWFGDGLALWLTHEKQHQNGDNHGFLDKFYGVGIVLDTFNNVEHRGGHKDVTLQINDGRKTLDDLNDETKIGCDAAFRYHAASASFDPVYSASRVRVRVERTKITVHVDPRSEGKWTACYEGEL-PFS--PDWLRRATVGLTASTGSLADNHDVLKLMAFDNIDDYGI-SHADSEVWTHNYSKEFD 683
The following BLAST results are available for this feature:
BLAST of NO07G00220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27367.16.200e-13579.51mannose-binding 2 [Nannochloropsis gaditana][more]
XP_008875912.13.600e-5843.63hypothetical protein H310_11132 [Aphanomyces invad... [more]
ETI53897.16.800e-5743.56hypothetical protein F443_03242 [Phytophthora para... [more]
XP_008900444.16.800e-5743.56hypothetical protein PPTG_07827 [Phytophthora para... [more]
XP_002901232.12.600e-5643.18lectin, putative [Phytophthora infestans T30-4] >E... [more]
XP_009844774.15.700e-5642.86hypothetical protein H257_17608 [Aphanomyces astac... [more]
XP_008616504.11.100e-5443.08hypothetical protein SDRG_12219 [Saprolegnia dicli... [more]
XP_009520185.17.000e-5441.73hypothetical protein PHYSODRAFT_539858 [Phytophtho... [more]
OWZ01833.11.200e-5341.02Lectin [Phytophthora megakarya][more]
GAX98455.11.200e-5341.99lectin, putative [Pythium insidiosum][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL102nonsL102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000880NSK000880Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00220.1NO07G00220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579977gene_2328Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100520g1gene3192Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00220.1NO07G00220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00220 ID=NO07G00220|Name=NO07G00220|organism=Nannochloropsis oceanica|type=gene|length=4326bp
ATGGCTAACGCCTCTGTCGACCCTTAGGAGGGTAGTTGTGGATGGGTGTG
GAAAGAGGGGCAGGGCGTGAGGGGAAGAATGTCTGCAAGTCAAGCGATCG
CATCTTTTCCTTCCTCTTGGTCTAGTTGAGGGGACGCCTGCAGCAAGTCG
TGTCTAACATTTGGACGATGCCACACCACAATTCATCCGCCATCATGACC
ACCAGTCCCGTAATGCCATGGACACAGGCGGTCCTTGCCCGTGAGGAGGG
CATTGTGTGTCTGGTTTCCCCGTGGGACGAGAAGACAAAATAATGCGCAC
AAACTATCATCGCTATCTGGTCACGCTCTGTGGGTGCCTCTGTCCTCCCG
CGGCAACACACGACAACGCTTCCCTCCCTTACGATCCCACATCCAAGGCA
GCACGAGACTACCCTACCGGAGCTCCTCGTCTTTTCCGGGGCTGTAGTGC
TTGCTGCATGGCTTCTAGACACACACCACTCGCTCCCCTTCCCATTGTCA
TCAATGCCATGGCCTGAGGCTTCCGTCTACGTGCCCATACATCCACGACG
CTTTGCTTCACTCCTCCACGATGGACGCAGCTGCCACGCTGGATCGATCG
TCAGCACACGTTCGACTGAAGAGGATGGAGGAGACGGTGGTGGGAACAGA
GCTAGCTTTCTTTTGCTCTTACTGAACATGACGATGGTGTGATGCCGCTC
CCTTAGTGCGAAGTTCTTGCTCCACTCACGCCACCGACCCACCCATATCC
ACAGATCCCGCTCCGCTGCACGTACAAGACACGCATTCACACCCGTACGG
AGGCAGAGTAGTCATGGTCGCAGGTGGCGGGGGAAGAAGAGGAGGAGCAC
GAGCAGGAGCAGGGAGATCTGGCGTCATCCTTGTGGTGGCGTGCCTCATG
GCACTGGCGACGATGATGGTGGGGGTAGGAGGAGAGATGATGGAGGCGCA
CACGTTCATAGCACCTTTTAATGACGTGCAGGTAGATGGAAAGCGCCTTG
TAAGCAAgtacgttatagggttggggagggggaagagggacgaaggggtc
gggggagaggcatgaataacatgagggcaccacttgccttcaagcatcct
ctctccaggcaatcctgacacgctctcctttgaaaaggcattccctgcac
tcatctccttcttctttcccactttcggcactccttcattcgttcttttg
ccctgccagGGACTGGACATCGGGTGGCGAGACGCAGGTCAACCAAAACT
TCGTCCGgtacgttaggacggatggatggagggacggagggagggaaggg
aggagggagggcgggagagcaggcaagagggaaggtagaaaagaaaagta
tagaagtattatacgtggtcgtcaaggtgagaactcctctcgcctggggt
ggaagaggggggagaggaatatgcacacgtgcctctcttccaatgtttgt
cgttacccgccttccccacggcgtttctcctaatggcgtattctcatcgc
tgtgtcattgccttctccccatcctcacggcatcccttcccccctccctc
ccccacagCCTCACCCCTGACCGGCAGTCGAAGAGGGGAGCCCTCTGGTC
CCATAATCCCCTGGGGGTGGATGCTTTCACCGCCACTCTTAAGTTCAGGA
TGCACGGCCAGgtacgttagggaggggggaagggagggagggagggaggg
tgactgaaggatgtatccttcaacaacacagatcctctcatccaccctcc
ctccctccctccctccctccctccctccctctttgacagGGTAAGAAGTT
CTTCGGGGATGGCATCGCGTTTTGGATCACTCAGAACCCTTATTGGGCCG
AGGGGGATGTGCACGGCGTCTCTCATGCCTTCACTGgtgcgtcctccctc
cctccctccctccctccctccctccctccttctgtccctccctccctccc
tctttccttccttcctctttggttcgattaagccgacttggccattcccc
tcccttcctccctccctcccctccagGCGTGGGGGTTGCTTTTGACACCT
TCAAGAACACGGAGCACGGTGCGCGGCATCGGGACGTCGCTGTCTTTATT
AATGATGGGAGCAGGAGCCGGGAAGACGTCATTGGTGGCTTTGACGGATG
gtgcgtcccctccccccctccctccctccctccctccctccctccctccc
ttgtcccactgccccttcccttcttgacccggtcttcttccccaagcact
catcgttattgcctgccctccctccctccctccctccccagCGACGCCTC
CCTTCGCTACCACGGCGAGCGGGCGGACTTCTCTGTCACAAACTCCTCCC
GAGCCAAGGTCACCCTCGAGgtacgtcccacccctcccttcttccctccc
ttcctccctccctccctccctccccttttcccctgcttgctgccatacct
caccctcctttgctccctccctctctccctccctccctccctctctagGG
CACCACCTTCTCGGTCCAGATCGATCCCCGCGGAAACGGCAACTGGTTTC
AATGCACCACCGTCGACCTCGCCCCCTACAACCTACCAGAGgtaggcctc
cctccctccctccctccctccctccctccctccatgcaccaccgtcgacc
tcaccctctccacctttctggaggcatgcttttccccgccccctccctcc
ctccctccccctcatttcccttctttccccttccctcccccctccctccc
tccctccagAACTGGCTCCGCAAGGCCCACCTGGGCCTCACAGCCACCAC
CGGCCAGCTCGCCGACAACCACGACGTCATCTCCCTCCACACATTCAACG
ATCTCGGACTCCATCCGGAGGCGGACGAGCTGGTGGTCACGCCGAAATTC
Ggtacgccctccttccctccctccttccctccctctaaaaaaattggctg
ttgtttcacccacccactcgcctaacacaccactccctctctctctctca
cacacacacacacacttaagGCCGTGGTGTCGATATCTCCGTCGAAGAAC
GCTTGGATCGCGTAGAGgtacgtccgcccctcccctccttccctccttca
ttctctcccatcctctccccttcatgttttggccttctcaatcctctatc
acctccccctcccatcttcctttcctccctccctcccttcccccttccct
cagGACATGATGTCTCAAGTCCTCCACCTCCTGGACGAGATGCAGGCCCA
CAACGAACATCAGCTTGTGGCGATCCAGgtagggagggagagagggaggg
aaggagggagggaggcagcgaccgtcttggtcttctccgtttaccccgtc
atctcgtactcattccctccctcccttcctccctcccttcctccctccct
tcctccctccttcccgtagGACCACATTTCCAACACCATCCGCAAACTCC
AGTCGCAGGAAGACTCCTCCGAGGACCGCATCGCCGCTCTAGAGCACGAG
CTGTACAAGAGCGTGGAGGGCACCGTTGAGGAGCGCCTTAAGTCAGTCGA
AGGATCTATTTCCgtacgtctcttgttgctgtcctctttatgcttccttt
tctcccttcctgctaccctccctcctacccaccgagcctttcctctttcg
tcttccttccatccatctcctatctcccgcccgcgcgatccgccctccct
ctccagcagtcagtctctaccggcgacaaacaccaaaaactcacacaccg
acttctctcctccattttctctccctccctcccttgctctctgtctttcc
agAACGCGATGGCTCACCGTGTAGCCGCCATCGAGACCAACCTCCACTCC
AAGGTGCAAAGCGTCATTGCCGCCGCCGGAGGAGGAGAAATGGGTGGCGG
AGGTGGAGGTGGACGGTGGACACTAATTGTGTTTTGTCTCGTGCTGGGCT
TATGCATGTTCCAGATATACCGGTGGGTGGAACGATTGAAGAAGAGCCAC
ATTTTGTGAGGGGGAGGGAGGGAAGGAGGGCAGAGGAAGAAGGAAGAAGA
TGTTTTGAGTTTATGTCCTTTTTTACACTTTCCTTCAGCCTTTGAGATCG
TTCACTGAAACACGGAGAGAGTAAAGTAGACATGGAGGAAGAGACGGGGG
GAGAGGGAGGGGGGGGAGCGAGAATGAGAGGATTTGAACCTAGATATAAA
AAGTTGTTGTTGTTTAGGAAGATGATGAGAGAACCGAAAAGTAGGAGATC
AATACTACCCCCATAGAGGTGAGAGTTAGCCACTCAAGTAGACGAAGGAA
ATTACCATGCATTCCTAGAACGACAA
back to top

protein sequence of NO07G00220.1

>NO07G00220.1-protein ID=NO07G00220.1-protein|Name=NO07G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=451bp
MVAGGGGRRGGARAGAGRSGVILVVACLMALATMMVGVGGEMMEAHTFIA
PFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLG
VDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVG
VAFDTFKNTEHGARHRDVAVFINDGSRSREDVIGGFDGCDASLRYHGERA
DFSVTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLR
KAHLGLTATTGQLADNHDVISLHTFNDLGLHPEADELVVTPKFGRGVDIS
VEERLDRVEDMMSQVLHLLDEMQAHNEHQLVAIQDHISNTIRKLQSQEDS
SEDRIAALEHELYKSVEGTVEERLKSVEGSISNAMAHRVAAIETNLHSKV
QSVIAAAGGGEMGGGGGGGRWTLIVFCLVLGLCMFQIYRWVERLKKSHIL
*
back to top
Synonyms
Publications