NO07G00210, NO07G00210 (gene) Nannochloropsis oceanica

Overview
NameNO07G00210
Unique NameNO07G00210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3673
Alignment locationchr7:91518..95190 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:91518..95190 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom
Homology
BLAST of NO07G00210 vs. NCBI_GenBank
Match: SAM08591.1 (hypothetical protein [Absidia glauca])

HSP 1 Score: 71.2 bits (173), Expect = 1.100e-8
Identity = 83/299 (27.76%), Postives = 135/299 (45.15%), Query Frame = 0
Query:  202 VAMSALMYSLEAVNVKLMGKDVGYWTISVWRGGVGAVC-CLTSYFATPREEGTNPLGQAANRPMLALRGVTGAAAVISSFAALTSMDMGDATCIFSTAPLWTALIAVSVRKGTWSHFDTLAAICCTVGVLLVLKPSPLSSTPSLPPSPLPTGASTPILRNTPFGILMALVSAVTTAAFTVLTRYVQHENTSVVSGYVM--VACILLA----FPGMIYEQLTRENLTLSHGWVSTLIQLFLTGVFSYAALMSKTYAMQITRKIGVIVMRYLSIFFAFGFEAFLLHHEVDGLALLGAAVIV 494
            +A+SAL +S  ++ VKL G     + I   R  +  V   L  YF      G +PLG    RP L  RG+ G+  +   F ++T + + DAT IF   P++TA++A  V   +++ FD + ++ C  GV+LV KP  L  +  +        + T I+      IL +L+ AV +A      R +    + +V       ++C++ A    F G I     +E  T           L L G+ ++         +Q+       +MR   + FAF F  F+LH   D  ++ GA+VIV
Sbjct:   37 MALSALGFSSMSLFVKLSGASFPSFEIVFARSVIQLVLGLLGCYFL-----GVHPLGDPKVRPWLVFRGLVGSLGLALFFYSITQLPLADATVIFFLGPMFTAILAAIVLGESFTLFDGICSVFCLFGVVLVSKPEFLFGSGDIVGD--DDASWTRII-----AILCSLLGAVMSAFAYCTVRKIGRGASYMVHVVYFGGISCVISAIGMYFQGAIMPSGAKEYTT-----------LLLVGITAFIGQCLLNQGLQMAPAGPGTLMRMNDVVFAFLFGIFILHEYPDVYSITGASVIV 312          
BLAST of NO07G00210 vs. NCBI_GenBank
Match: OAX39821.1 (DUF6-domain-containing protein [Rhizopogon vinicolor AM-OR11-026])

HSP 1 Score: 70.9 bits (172), Expect = 1.500e-8
Identity = 76/307 (24.76%), Postives = 140/307 (45.60%), Query Frame = 0
Query:  202 VAMSALMYSLEAVNVKLMGK---DVGYWTISVWRGGVGAVCCLTSYFATPREEGTNPL-GQAANRPMLALRGVTGAAAVISSFAALTSMDMGDATCIFSTAPLWTALIAVSVRKGTWSHFDTLAAICCTVGVLLVLKPSPLSSTPSL-PPSPLPTGASTPILRNTPFGILMALVSAVTTAAFTVLTRYVQHENTSVVSGYVMVACILLAFPGMIYEQLTRENLTLSHGWVSTLIQLFLTGVFSYAALMSKTYAMQITRKIGVIVMRYLSIFFAFGFEAFLLHHEVDGLALLGAAVIVAGCVLSVLTQ 504
            +  S   ++   ++VKL+      V    + V R G+  +CCL     T      +P+ G    R +L +RG+TG   +   + +L  + + DAT +    PL TA+    + K ++S   T+AA+C  +GV+L+ +P  L  +P + P        +TP  R    G  M  V   +T A+T +    +  ++  +  Y  +   ++A  GMI   + +  +   + W   L+ LF+ G+  +AA    T  +Q       ++  Y+ + FA   E          L++LGAA+I++  +  VL++
Sbjct:   54 IITSQFFFAAMGISVKLLNSLEPPVHALQVIVVRMGITFICCLIYMVIT---RVPDPIAGPKGVRTLLVIRGITGFFGLCGLYWSLQYLSVADATVLTDLTPLTTAVAGYLILKESYSTKQTVAAVCSLIGVVLIARPPFLLGSPGVNPQGNHDAPEATPEQRLLAVGACMISVLG-STGAYTSIRAIGKRAHSMHIMTYFSLWSTIIAALGMI---VFKVPVVYPNTWTWALV-LFMVGINGFAAQALLTLGLQREALSLCVIGVYVQVLFAVVLERLFFGVTPSLLSVLGAAIIISAAIYVVLSK 352          
BLAST of NO07G00210 vs. NCBI_GenBank
Match: XP_003283849.1 (hypothetical protein DICPUDRAFT_45078 [Dictyostelium purpureum] >EGC39628.1 hypothetical protein DICPUDRAFT_45078 [Dictyostelium purpureum])

HSP 1 Score: 70.5 bits (171), Expect = 1.900e-8
Identity = 66/298 (22.15%), Postives = 128/298 (42.95%), Query Frame = 0
Query:  201 LVAMSALMYSLEAVNVKLMGKDVGYWTISVWRGGVGAVCCLTSYFATPREEGTNPLGQAANRPMLALRGVTGAAAVISSFAALTSMDMGDATCIFSTAPLWTALIAVSVRKGTWSHFDTLAAICCTVGVLLVLKPSPLSSTPSLPPSPLPTGASTPILRNTPFGILMALV----SAVTTAAFTVLTRYVQHENTSVVSGYVMVACILLAFPGMIYEQLTRENLTLSHGWVSTLIQLFLTGVFSYAALMSKTYAMQITRKIGVIVMRYLSIFFAFGFEAFLLHHEVDGLALLGAAVIVA 495
            L+ +SA ++S+ A  VK +  ++    I+ +R   G + C+   ++       NPLG    R  L+LRG++G  ++++ F  +  + + +A  I  T+P+ TA +A  + K  W   + L A     GV ++ KPS L             G +    +N P  +L   +    +  T  ++  + +     N  ++  Y     +++  P     Q  +     + G+++      L GV    A  +    +Q+ +      M YL I F F +    L  ++D +  LGA +I++
Sbjct:  327 LLVLSAFLFSIMAFIVKKISTELSSLEIAFFRSVYGLIACILILYSI----RDNPLGPKQFRLFLSLRGLSGTISLVAYFYTINVLPLSEAVIISFTSPVITAALAAVLLKEKWGPIEALCAFLSLCGVTIISKPSFLFHNHG-------DGDTAGNAQNDPSKLLYIFIGIGGAFFTAVSYIAVRKVGPTVNPFILVNYFSAIAVIITLPSSFIFQFFKWPSLSTWGYIT------LMGVLGTIAQGAVNRGIQLEKAAKAAAMNYLQIIFTFIWGIAFLGEKIDWITFLGAGLILS 607          
BLAST of NO07G00210 vs. NCBI_GenBank
Match: FAA00712.1 (TPA: transmembrane protein 20-like protein [Dictyostelium discoideum])

HSP 1 Score: 70.5 bits (171), Expect = 1.900e-8
Identity = 80/294 (27.21%), Postives = 132/294 (44.90%), Query Frame = 0
Query:  201 LVAMSALMYSLEAVNVKLMGKDVGYWTISVWRGGVGAVCCLTSYFATPREEGTNPLGQAANRPMLALRGVTGAAAVISSFAALTSMDMGDATCIFSTAPLWTALIAVSVRKGTWSHFDTLAAICCTVGVLLVLKPSPLSSTPSLPPSPLPTGASTPILRNTPFGILMALVSAVTTAAFTVLTRYVQHENTSVVSGYVMVACILLAFPGMIYEQLTRENLTLSHGWVSTLIQLFLTGVFSYAALMSKTYAMQITRKIG-VIVMRYLSIFFAFGFEAFLLHHEVDGLALLGAAVIV 494
            L+  +A ++S  A  VKL+ K+     I+  R   G + C+   F+  RE   NPLG    R  LA RG++GA ++ + F  LT + + +A  I  T+P+ TA +A  V K  W   + + A     GV++V KPS L    +   S    G  +  L     G+  A  +AV   ++  + +     N  V+  Y       L  P     Q        + G+++      L GV +  A  +    +Q+++K      M YL I F F ++  L+H  +D + +LGA +I+
Sbjct:  367 LLVFAAFLFSFMAYLVKLISKEFDSLEIAFMRSFYGLIGCIIILFSL-RE---NPLGPKNVRWFLAARGLSGAISLCAYFYTLTVLPLSEAVIISFTSPVITAALAAVVLKEKWGGIEAICAFLSLCGVVVVSKPSFLFHHHT-DGSTTENGEDSGKLLYVLIGVGGAFFTAV---SYIAVRKVGPSVNPFVLVIYFSAVSSALCLPSSFAFQTFVWPSLKAWGYIT------LIGVVATIAQGAVNAGIQLSKKTSTAAAMNYLQIIFTFIWQITLMHQPLDWITILGALLIL 646          
BLAST of NO07G00210 vs. NCBI_GenBank
Match: XP_629519.1 (hypothetical protein DDB_G0292606 [Dictyostelium discoideum AX4] >EAL61106.1 hypothetical protein DDB_G0292606 [Dictyostelium discoideum AX4])

HSP 1 Score: 70.5 bits (171), Expect = 1.900e-8
Identity = 80/294 (27.21%), Postives = 132/294 (44.90%), Query Frame = 0
Query:  201 LVAMSALMYSLEAVNVKLMGKDVGYWTISVWRGGVGAVCCLTSYFATPREEGTNPLGQAANRPMLALRGVTGAAAVISSFAALTSMDMGDATCIFSTAPLWTALIAVSVRKGTWSHFDTLAAICCTVGVLLVLKPSPLSSTPSLPPSPLPTGASTPILRNTPFGILMALVSAVTTAAFTVLTRYVQHENTSVVSGYVMVACILLAFPGMIYEQLTRENLTLSHGWVSTLIQLFLTGVFSYAALMSKTYAMQITRKIG-VIVMRYLSIFFAFGFEAFLLHHEVDGLALLGAAVIV 494
            L+  +A ++S  A  VKL+ K+     I+  R   G + C+   F+  RE   NPLG    R  LA RG++GA ++ + F  LT + + +A  I  T+P+ TA +A  V K  W   + + A     GV++V KPS L    +   S    G  +  L     G+  A  +AV   ++  + +     N  V+  Y       L  P     Q        + G+++      L GV +  A  +    +Q+++K      M YL I F F ++  L+H  +D + +LGA +I+
Sbjct:  409 LLVFAAFLFSFMAYLVKLISKEFDSLEIAFMRSFYGLIGCIIILFSL-RE---NPLGPKNVRWFLAARGLSGAISLCAYFYTLTVLPLSEAVIISFTSPVITAALAAVVLKEKWGGIEAICAFLSLCGVVVVSKPSFLFHHHT-DGSTTENGEDSGKLLYVLIGVGGAFFTAV---SYIAVRKVGPSVNPFVLVIYFSAVSSALCLPSSFAFQTFVWPSLKAWGYIT------LIGVVATIAQGAVNAGIQLSKKTSTAAAMNYLQIIFTFIWQITLMHQPLDWITILGALLIL 688          
BLAST of NO07G00210 vs. NCBI_GenBank
Match: ORZ36649.1 (hypothetical protein BCR44DRAFT_38507 [Catenaria anguillulae PL171])

HSP 1 Score: 70.5 bits (171), Expect = 1.900e-8
Identity = 86/305 (28.20%), Postives = 141/305 (46.23%), Query Frame = 0
Query:  201 LVAMSALMYSLEAVNVKLMGKDVGYWTI----SVWRGGVGAVCCLTSYFATPREEGTNPLGQAANRPMLALRGVTGAAAVISSFAALTSMDMGDATCIFSTAPLWTALIAVSVRKGTWSHFDTLAAICCTVGVLLVLKPSPLSSTPSLPPSPLPTGASTPILRNTPFGILMALVSAVTTAAFTVLTRYV----QHENTSVVSGYVMVACILLAFPGMIYEQLTRENLTLSHGWVSTLIQLFLTGVFSYAALMSKTYAMQITRKIGVIVMRYLSIFFAFGFEAFLLHHEVDGLALLGAAVIVAGCV 498
            L+++SAL +SL +  VK  G       I    SV +  +  V C+  +        T+PLG   +RP+L LRG  GA  + + F A+T  ++G+AT +F T P +TA++A           D  + + C +GV LV +P+ L  + +          +TP     P  IL AL+ A+ +A   V  R +     H    VV  Y  +   LL+   M  +  TR   + ++ W      L L G+ ++   +     +Q+ R    ++MR L + FA+ F   + H +V   +L+GA +IV   V
Sbjct:   47 LMSLSALFFSLMSALVKASGHIFPTAQIVFARSVIQWLLAHVSCIYIF-------KTSPLGPRTSRPLLVLRGSAGAVGLGAFFFAITHGNLGEATTVFFTGPAFTAVLARVWLGEPLGPLDAASILSCLLGVTLVARPAFLFESEA-------GAVATP-----PAAILAALLGALMSATAYVTVRKLGANGAHYMVHVV--YFGLVSTLLSGTLMYVDPATRLPAS-AYEW----CLLALVGLCAFGGQILLNRGLQLARAGPGVLMRNLDVVFAYVFGVCVFHEQVFWTSLVGAGLIVGTAV 325          
BLAST of NO07G00210 vs. NCBI_GenBank
Match: XP_012749415.1 (hypothetical protein SAMD00019534_109320 [Acytostelium subglobosum LB1] >GAM27756.1 hypothetical protein SAMD00019534_109320 [Acytostelium subglobosum LB1])

HSP 1 Score: 70.1 bits (170), Expect = 2.500e-8
Identity = 75/297 (25.25%), Postives = 134/297 (45.12%), Query Frame = 0
Query:  205 SALMYSLEAVNVKLMGK-DVGYWTISVWRGGVGAVCCLTSYFATPREEGTNPLGQAANRPMLALRGVTGAAAVISSFAALTSMDMGDATCIFSTAPLWTALIAVSVRKGTWSHFDTLAAICCTVGVLLVLKPSPLSSTPSLPPSPLPTGASTPILRNTPFGILMALVSAVTTAAFTVLTRYVQHENTSVVSGYVMVACILLAFPGMI-YEQLTRENLTLSHGWVSTLIQLFLTGVFSYAALMSKTYAMQITRKIGVIVMRYLSIFFAFGFEAFLLHHEVDGLALLGAAVIVAGCVLS 500
            SA  +SL A+ VK++ K +     ++  R   G V C+    +       NPLG A  R +L +RG++G  ++ + +  LT + M +A CI   +P+ TA ++  V K  W  FD L A+   VGV+++ KP+ +  T       +PT      L     G+  A  +AV   +F  + +     N  V+  +  V   ++   G + +E      +     WV     L   G  ++ A       +Q+ +    + M Y+ I F F ++   +H  VD   ++GA +I++  V++
Sbjct:  285 SAFFFSLMALFVKVLSKQNFQSLELAFIRSVFGIVGCIIVLSSLK----INPLGPAPKRVLLTVRGMSGTVSLAAYYITLTKLPMAEAVCISFISPIITAAVSAVVLKEKWGIFDGLCAVVSLVGVVIIAKPAFIFGT---SVHNIPTLTPNERLLYICIGVTGACFAAV---SFITVRKIGPGINPFVLVFFFSVVSTIVTLAGSLSFETFI---MPTFRQWV----LLTALGTSAFVAQGCINRGLQLEKAGRAVSMNYIQIVFTFLWDLIFIHDPVDVFTIIGALLILSCAVIT 564          
BLAST of NO07G00210 vs. NCBI_GenBank
Match: KNE61904.1 (hypothetical protein AMAG_07173 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 69.7 bits (169), Expect = 3.300e-8
Identity = 89/307 (28.99%), Postives = 137/307 (44.63%), Query Frame = 0
Query:  202 VAMSALMYSLEAVNVKLMGKDVGYWTI----SVWRGGVGAVCCLTSYFATPREEGTNPLGQAANRPMLALRGVTGAAAVISSFAALTSMDMGDATCIFSTAPLWTALIAVSVRKGTWSHFDTLAAICCTVGVLLVLKPSPLSSTPSLPPSPLP----TGASTPILR-NTPFGILMALVSAVTTAAFTVLTRYV---QHENTSVVSGYVMVACILLAFPGMIYEQLTRENLTLSHGWVSTLIQ---LFLTGVFSYAALMSKTYAMQITRKIGVIVMRYLSIFFAFGFEAFLLHHEVDGLALLGAAVIV 494
            +A+SAL +S+ +  VK  G     + +    SV +  +G + C           G   LG    R +L +RG  GA  + + F A+  MD+G++T IF T P +TAL+A  V     +  D L+ + C  GV LV +P+ L   P+    P       GA  P L    P  I  AL+ AV ++   VL R V    H    VV  Y  +A   L+   M++    R        W +TL++   L   G+ ++   +     +Q+ R    ++MR L + FAF F   L        ++LGA +IV
Sbjct:   90 MALSALFFSVMSALVKHAGFTFPTFEVVFARSVIQWMLGVIGCWW--------VGVPSLGPKEVRTLLVMRGSAGAIGLGAYFYAIIHMDLGESTVIFFTGPAFTALLAHLVLGEPLTRLDILSIVACLTGVTLVARPAALFPEPTSLDDPTSIMAMAGAPEPALAWQRPTAIFAALLGAVMSSCAYVLVRKVGRGAHYLIHVV--YFGMASTALSGVLMVFAPDERGPAR----WPATLLEATVLLTIGITAFGGQVLLNKGLQLARAGPGVLMRNLDVVFAFIFGITLFDERPFVTSILGAILIV 382          
BLAST of NO07G00210 vs. NCBI_GenBank
Match: KNE62905.1 (hypothetical protein AMAG_08083 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 69.7 bits (169), Expect = 3.300e-8
Identity = 90/314 (28.66%), Postives = 139/314 (44.27%), Query Frame = 0
Query:  202 VAMSALMYSLEAVNVKLMGKDVGYWTI----SVWRGGVGAVCCLTSYFATPREEGTNPLGQAANRPMLALRGVTGAAAVISSFAALTSMDMGDATCIFSTAPLWTALIAVSVRKGTWSHFDTLAAICCTVGVLLVLKPSPLSSTPSLPPSPLPTGASTPILR------NTPFGILMALVSAVTTAAFTVLTRYV---QHENTSVVSGYVMVACILLAFPGMIYEQLTRENLTLSHGWVSTLIQ---LFLTGVFSYAALMSKTYAMQITRKIGVIVMRYLSIFFAFGFEAFLLHHEVDGLALLGAAVIVAGCVLS 500
            +A+SAL +S+ +  VK  G     + +    SV +  +G + C           G   LG    R +L +RG  GA  + + F A+  MD+G++T IF T P +TAL+A  V     +  D L+ + C  GV LV +P+ L   P   P+ +   A  P +         P  I  AL+ AV ++   VL R V    H    VV  Y  +A   L+   M+     R        W +TL++   L   GV ++   +     +Q+ R    ++MR L + FAF F   L        ++LGA +IV   VL+
Sbjct:   88 MALSALFFSVMSALVKHAGFTFPTFEVVFARSVIQWTLGVIGCWW--------VGVPSLGPKEVRTLLVMRGSAGAIGLGAYFYAIIHMDLGESTVIFFTGPAFTALLAHLVLGEPLTRLDILSIVACLTGVTLVARPAALFPQPIDDPASVMAMAGAPTVLEPAPAWQRPAAIFAALLGAVMSSCAYVLVRKVGRGAHYLIHVV--YFGMASTALSGVLMVIAPDERGPAR----WPATLLEATVLLAIGVTAFGGQVLLNKGLQLARAGPGVLMRNLDVVFAFIFGITLFDERPFVTSILGAILIVGTTVLT 387          
BLAST of NO07G00210 vs. NCBI_GenBank
Match: XP_008865190.1 (hypothetical protein H310_03180 [Aphanomyces invadans] >ETW05413.1 hypothetical protein H310_03180 [Aphanomyces invadans])

HSP 1 Score: 68.6 bits (166), Expect = 7.300e-8
Identity = 87/337 (25.82%), Postives = 150/337 (44.51%), Query Frame = 0
Query:  168 SPSSEPLGRSVVVPGWGGKLICGMDEPTAVATALVAMSALMYSLEAVNVKLMGKDVGYWTISVWRGGV--GAVCCLTSYFATPREEGTNPLGQAANRPMLALRGVTGAAAVISSFAALTSMDMGDATCIFSTAPLWTALIAVSVRKGTWSHFDTLAAICCTVGVLLVLKPSPLSSTPSLPPSPLPTGASTPILRNTPFGILMALVSAVTTAAFTVLTRYVQHENTSVVSGYVMVACILLAFPGMIYEQ----LTRENLTLSHGWVSTLIQLFLTGVFSYAALMSKTYAMQITRKIGVIVM-RYLSIFFAFGFEAFLLHHEVDGLALLGAAVIVAGCV 498
            +PSS  L  + V P     L+   D+P  V T LVA +A+ +SL A  VK +  D+     + WR GV    V  L  Y         + L        LA R V G A+V+S F A+T M + DA+ I +T+P+  +L+ V +R+      D + A     G++ V +P+ +   P              I   +P+  L A+ SAV  A      + +    T VV+ Y+++    ++   ++  Q    L     T++   +++ +  FL  +     L    +    TR   ++ M +Y+ + F F ++  L+H  V+  ++LGA ++ A  V
Sbjct:    9 APSSRSLDAAEVTP----LLVYDHDKPHMVGTVLVAFAAVAFSLVATYVKYISVDLTSVEATFWRFGVAYAFVLILALY------SKVDLLVAPQYHWDLAWRCVFGTASVLSFFWAITQMALADASTIAATSPVVVSLVGVWLRREPVGLVDIVTAAVAVAGIVFVARPNVVFEVPI-------------ISYGSPYACLGAVGSAVFVALANAHVQKLSAVPTLVVTHYLLLVGATISGIWVLVAQGRFSLHGCGRTVAQATIASGLVAFLGDLALSKGLQQLEHPDTSTRTNRLLSMVQYVDLAFVFLWDVTLIHERVNWWSVLGAVLVTAAVV 322          
The following BLAST results are available for this feature:
BLAST of NO07G00210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
SAM08591.11.100e-827.76hypothetical protein [Absidia glauca][more]
OAX39821.11.500e-824.76DUF6-domain-containing protein [Rhizopogon vinicol... [more]
XP_003283849.11.900e-822.15hypothetical protein DICPUDRAFT_45078 [Dictyosteli... [more]
FAA00712.11.900e-827.21TPA: transmembrane protein 20-like protein [Dictyo... [more]
XP_629519.11.900e-827.21hypothetical protein DDB_G0292606 [Dictyostelium d... [more]
ORZ36649.11.900e-828.20hypothetical protein BCR44DRAFT_38507 [Catenaria a... [more]
XP_012749415.12.500e-825.25hypothetical protein SAMD00019534_109320 [Acytoste... [more]
KNE61904.13.300e-828.99hypothetical protein AMAG_07173 [Allomyces macrogy... [more]
KNE62905.13.300e-828.66hypothetical protein AMAG_08083 [Allomyces macrogy... [more]
XP_008865190.17.300e-825.82hypothetical protein H310_03180 [Aphanomyces invad... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL102nonsL102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000881NSK000881Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00210.1NO07G00210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579971gene_2326Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00210.1NO07G00210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00210 ID=NO07G00210|Name=NO07G00210|organism=Nannochloropsis oceanica|type=gene|length=3673bp
AAAGGAGCCAACTGCTGCTGCCTATCACGATCATATATACACGACGCACC
CCTTGCATACCAGCTGCGGCATCCCCCGGAAAATTCGTCGGGTCGACGAT
CTCGTTGTCGTCAGGCTATAAGATCTAGGTACCACAGGTCACGCTATTTG
CAGTCCCTCTCCCTTTCACCATCAGGCATCGCATGCCCGACAAACCACGA
CGTGCATAAGGGCGCGGACCAAAACCAGAATATGGTCATCAATGCGCTCC
CTTCTCCCTCATCTAGAGGACAGAATATGCAGGAAGAGGAGTCTCTACCA
CAACCACAGTTACCACCACCACCACTAACATCGGAAGATGGAGAGGGAGG
AGAGAATGAAGTGGCATTGACGCTGTCCAGCTCCAACCGCAACCAACTCT
ACAGCCATTGTGATGACGAGGACGATGAAGGCGTGATGGCCGTTCCAGTG
TGCTACCGTCCTTTCCCGCAGCATAGGCAGGCTAGCATGGATGTGGAGGG
AGGGAGAGGTTACTCCACGACCTTTGGCGCGGAGGAAGACATGCACATGC
GCACCCTCCGCCTCAGCCAGCAGCTGTGCCTAGATGATGGCGACAGTAGC
AGCCATGACAAGGCGGCGGCAATGgtacgcaagtctttatggttttgact
ttttgctgtcacgaaacaagtagataacaaaacagtgcgcctcattgatc
tttacatccctccctccctccctccctccttccttccctcattcttctcc
tctgtggctcactctacagGCAACCATGACAGCCACCGGGGCCGGAACCT
TAACCCACACCGATAGTAAGGGCAAGTCACTGCAATCGCCCTTCTCCCTC
CGCACTTCTGAAACCATCCCCTCCTCCTCCCCTTCCTCTGAGCCCCTTGG
GCGGTCTGTTGTCGTACCTGGCTGGGGAGGCAAATTAATTTGTGGCATGG
ACGAGCCCACAGCAGTAGCAACAGCGCTGGTGGCCATGTCTGCCTTGATG
TACAGgtaaatgggagcaggggaggaaggacggataagcgatacggggag
agggagtttgtgggaaacggtcacattgagcggtagacgcggctttatca
accgtgtcctccctccctccctccctccctccctccctcccttcctccct
cccttccttcctcctaagCTTGGAAGCCGTCAATGTCAAACTTATGGGGA
AGGACGTGGGCTACTGGACCATCAGCGTGTGGCGCGGAGGGGTAGGCGCG
GTGTGTTGCCTCACGTCTTACTTCGCCACGCCCAGAGAGGAGGGGACGAA
CCCCCTGGgtagggcaggagggagggagggagggagggaaatgaaggaga
tataaaatatccgctcagacgggataacaatccctttccctccttctctc
ccttactgccttactccctccctccctccctccctgcagGTCAAGCTGCC
AACAGACCGATGCTCGCCCTTCGGGGAGTCACGGGCGCCGCCGCGGTCAT
CTCCAGCTTTGCCGCTCTGACGgtacgtagggagggagggagagagggag
ggaggaagaagaagtgatgtggtaattcgggacgagtgtcccttactcct
actcctccctccctccttcggcccctccctccctccctccctcccagAGC
ATGGACATGGGAGATGCCACCTGCATATTTTCCACGGCCCCGCTGTGGAC
GGCGCTGATAGCCGTGAGCGTGAGAAAGgtgaggaagggagggagggagg
gagggaggggccgaaggagggaacagggttggtttcaattctttccgtca
cgcgcgacaatcgttcacgccctccctccctccctccctccctccctcct
tcagGGCACCTGGTCTCACTTCGACACCCTGGCTGCAATCTGCTGCACGG
TCGGTGTCCTCCTCGTTCTCAAGCCCAGCCCCCTCTCCTCCACACCCTCC
CTCCCTCCCTCCCCCCTCCCGACTGGGGCCTCGACCCCGATATTGCGGAA
CACGCCGTTCGGCATCCTCATGGCTCTGGTCTCCGCAGTCACCACAGgta
agggaggaagggagggagggagggagggaggatggagaagccactgtacg
gggagaatttcgtccaaattacggtttgtttcggctcaccttcacctgct
cccctccctcccagCCGCCTTCACCGTCCTGACCCGCTACGTGCAGCACG
AGAACACCTCTGTGGTCTCGGGCTACGTGATGGTGGCTTGCATTCTCCTC
GCCTTCCCCGGCATGATCTACGAGCAACTCACGCGGGAAAATCTGgtacg
cccctccctccctccctccctccctccctccctccctccctcccttgatt
cacccgaggcccgccgaccggactatgcagacccgttgcggttctcgtta
ttcatatccttctatctccctccctcttcccctgaacccctccctccctc
cttcttctctcccagACACTGTCTCACGGCTGGGTTTCCACCCTGATTCA
ACTCTTCCTCACCGGCGTCTTCTCCTACGCGGCCCTCATGTCCAAAACCT
ATGCCATGCAAATCACCCGGAAAATCGGCGgtatgtcccctcctccctcc
ctccttcccctgctccccctctccctccaaacctccccccgtgatcgtca
tgtgctacctttccattcttttgggccgtcggattcgaaactttcctcct
ccatcaacctcatccttcctccctccctccctcttctctccctccctccc
cccctccaatagTGATCGTCATGCGCTACCTCTCCATCTTCTTCGCCTTC
GGTTTTGAGGCTTTCCTCCTCCACCATGAGGTAGATGGCCTAGCCCTCCT
AGGTGCCGCCGTCATTGTGGCAGGCTGCGTCCTCTCTGTACTGACGCAGG
GTGCGAAAGGAGgtaagtgaaagagaggaggcgactggaggaagggaggg
agggagagagggaaggagggagggaagaagaggggggagggaggatacgg
gagaccatcgcgagatgtatgagcatcaccgccatttctcacgaccttcc
ttcccttcttgcccacctccctcccttccttcctccatccagGTGCTGTT
GATTCAACCGTTGTAGATGACACTCTTTCCCTTTCCGGCTCCCTGGCCAA
AGCCCAGGCGGCTGCTGCTACTGCTGCTACTGCTGCTGCTACTGCTGCTG
CTGGAGCGGCGGCGGGGAGGGGGTCGAGAGGAAGGAAGAACATCGTGACG
GCGCAGGCGTGATGGGGAAGGAAGAGCGTGATGGAGAAGAGCGGGGAAAA
CGGCGCAGGGGACAAGGAAGAGGCCACGTCACGAAGGGAGGGAAGAGACG
AAAAAAGGCACGAGAGTGTGGGGGGGGTGATGAGGCAGGAGGAAGCGACA
GAGGGAGCGAGGGACCGCAAGGGATTGAACATTTTCTGTATGGATGCAGG
TGAGGTGCGCGTGAGTGAATAGAAAAAATAGAGGAAGCCCAATTTTGTGG
TGGTTTATGCCTGTAGGTGCAGAAGAGCGTGTATAAATCATGTGGGGAGT
GAGTGTGTGTGTTTCCAAGCATAACAAGGCCGGGGGAAAAGGCTAGAGAC
AGAGGCCGAGGTTGGATGAATCAAATCCAAATAACAGAAGATTCAGCGAT
TTTCGCCACGCGAATATCAGGGG
back to top

protein sequence of NO07G00210.1

>NO07G00210.1-protein ID=NO07G00210.1-protein|Name=NO07G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=564bp
MVINALPSPSSRGQNMQEEESLPQPQLPPPPLTSEDGEGGENEVALTLSS
SNRNQLYSHCDDEDDEGVMAVPVCYRPFPQHRQASMDVEGGRGYSTTFGA
EEDMHMRTLRLSQQLCLDDGDSSSHDKAAAMATMTATGAGTLTHTDSKGK
SLQSPFSLRTSETIPSSSPSSEPLGRSVVVPGWGGKLICGMDEPTAVATA
LVAMSALMYSLEAVNVKLMGKDVGYWTISVWRGGVGAVCCLTSYFATPRE
EGTNPLGQAANRPMLALRGVTGAAAVISSFAALTSMDMGDATCIFSTAPL
WTALIAVSVRKGTWSHFDTLAAICCTVGVLLVLKPSPLSSTPSLPPSPLP
TGASTPILRNTPFGILMALVSAVTTAAFTVLTRYVQHENTSVVSGYVMVA
CILLAFPGMIYEQLTRENLTLSHGWVSTLIQLFLTGVFSYAALMSKTYAM
QITRKIGVIVMRYLSIFFAFGFEAFLLHHEVDGLALLGAAVIVAGCVLSV
LTQGAKGGAVDSTVVDDTLSLSGSLAKAQAAAATAATAAATAAAGAAAGR
GSRGRKNIVTAQA*
back to top
Synonyms
Publications