NO06G04530, NO06G04530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04530 vs. NCBI_GenBank
Match: XP_005854675.1 (thioredoxin-1 [Nannochloropsis gaditana CCMP526] >EKU21682.1 thioredoxin-1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 233.8 bits (595), Expect = 4.100e-58 Identity = 120/163 (73.62%), Postives = 138/163 (84.66%), Query Frame = 0 Query: 15 LLLAICALVSSFYTAPARAAASAASLLPFHRQHKNKQQQHKSILARLSTTRGGVAGKVKEVQTLEETEAALSEAGSKLVVLDFTATWCGPCKLISPVFDALSEEISTNEAVFLKVDVDVNEGTARKFEVFQMPTFVFVKDGEVKGRLVGANPDKLREAVFRFL 178 L L + A ++F+TAP + +S ASLLP HRQ+K +Q+ +S L RL+T RGGV+GKV EV+TLEETE AL+ AGSKLVVLDFTATWCGPCKLISPVF+ LSEEIS NEAVFLKVDVDVNE TA+KFEV QMPTF+FVK+ EVKGRLVGANPDKLREAVFR L Sbjct: 8 LFLIVIASTTAFHTAPWASPSSTASLLPLHRQYKQNEQRPQSALTRLATIRGGVSGKVSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPTFIFVKNSEVKGRLVGANPDKLREAVFRLL 170
BLAST of NO06G04530 vs. NCBI_GenBank
Match: EWM26430.1 (thioredoxin-1 [Nannochloropsis gaditana]) HSP 1 Score: 169.5 bits (428), Expect = 9.600e-39 Identity = 94/164 (57.32%), Postives = 115/164 (70.12%), Query Frame = 0 Query: 15 LLLAICALVSSFYTAPARAAASAASLLPFHRQHKNKQQQHKSILARLSTTRGGVAGKVK-------------------------EVQTLEETEAALSEAGSKLVVLDFTATWCGPCKLISPVFDALSEEISTNEAVFLKVDVDVNEGTARKFEVFQMPTFVFVK 154 L L + A ++F+TAP + +S ASLLP HRQ+K +Q+ +S L RL+T RGGV+GKV+ EV+TLEETE AL+ AGSKLVVLDFTATWCGPCKLISPVF+ LSEEIS NEAVFLKVDVDVNE TA+KFEV QMP ++ ++ Sbjct: 8 LFLIVIASTTAFHTAPWASPSSTASLLPLHRQYKQNEQRPQSALTRLATIRGGVSGKVRTHMIEEGEKGKKDNFSHFLVILPVSEVRTLEETEEALNGAGSKLVVLDFTATWCGPCKLISPVFEGLSEEISENEAVFLKVDVDVNEETAKKFEVSQMPVYIHLR 171
BLAST of NO06G04530 vs. NCBI_GenBank
Match: GAX09726.1 (thioredoxin 1 [Fistulifera solaris]) HSP 1 Score: 125.2 bits (313), Expect = 2.100e-25 Identity = 64/106 (60.38%), Postives = 79/106 (74.53%), Query Frame = 0 Query: 70 GKVKEVQTLEETEAALSEAG--SKLVVLDFTATWCGPCKLISPVFDALSEEISTNEAVFLKVDVDVNEGTARKFEVFQMPTFVFVKDGEVKGRLVGANPDKLREAV 174 G V E +LE+ EA L +AG SKLVV+DFTATWCGPCK+ISPVF LSE S ++ VFLKVDVD N TA K+ V MPTF+F+K GE+ R++GANP KL+E + Sbjct: 30 GSVVEPDSLEDVEAILLKAGAESKLVVIDFTATWCGPCKMISPVFHELSE--SFDDVVFLKVDVDENPDTAAKYNVSAMPTFLFIKGGEIVDRMMGANPSKLQELI 133
BLAST of NO06G04530 vs. NCBI_GenBank
Match: GAX19616.1 (thioredoxin 1 [Fistulifera solaris]) HSP 1 Score: 122.9 bits (307), Expect = 1.000e-24 Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 0 Query: 70 GKVKEVQTLEETEAALSEAG--SKLVVLDFTATWCGPCKLISPVFDALSEEISTNEAVFLKVDVDVNEGTARKFEVFQMPTFVFVKDGEVKGRLVGANPDKLREAV 174 G V E TLE+ E L +AG SKLVV+DFTATWCGPCK+ISPVF LS+ S ++ VFLKVDVD N TA K+ V MPTF+F+K GE+ R++GANP KL+E + Sbjct: 43 GSVVEPDTLEDVEDILLKAGAESKLVVIDFTATWCGPCKMISPVFHELSD--SFDDVVFLKVDVDENPDTAAKYNVSAMPTFLFIKGGEIVDRMMGANPTKLQELI 146
BLAST of NO06G04530 vs. NCBI_GenBank
Match: CBJ25595.1 (similar to thioredoxin-like protein [Ectocarpus siliculosus]) HSP 1 Score: 119.4 bits (298), Expect = 1.100e-23 Identity = 60/109 (55.05%), Postives = 81/109 (74.31%), Query Frame = 0 Query: 65 RGGVAGKVKEVQTLEETEAALSEAGSKLVVLDFTATWCGPCKLISPVFDALSEEISTNEAVFLKVDVDVNEGTARKFEVFQMPTFVFVKDGEVKGRLVGANPDKLREAV 174 RGG G+V++V T EE E +S + LVV+DFTATWCGPC+ ISPVF+ LS+E++ + VFLKVDVD NE TA+K++V QMPTF+F++ GEV + GA+ LRE + Sbjct: 61 RGG-GGQVQQVATQEELEQVISNSNGALVVIDFTATWCGPCQKISPVFELLSQELT--DVVFLKVDVDENEETAQKYDVVQMPTFLFMRKGEVVDQFSGASVAMLREKI 166
BLAST of NO06G04530 vs. NCBI_GenBank
Match: AEW43599.1 (thioredoxin [Epinephelus coioides]) HSP 1 Score: 111.7 bits (278), Expect = 2.400e-21 Identity = 53/98 (54.08%), Postives = 70/98 (71.43%), Query Frame = 0 Query: 72 VKEVQTLEETEAALSEAGSKLVVLDFTATWCGPCKLISPVFDALSEEISTNEAVFLKVDVDVNEGTARKFEVFQMPTFVFVKDGEVKGRLVGANPDKL 170 V+ V+TLEE +A L EAG KLVV+DFTA+WCGPCK I P FD LS + +FLKVDVD + A K++V MPTF+F+K+G+ ++GA+ DKL Sbjct: 2 VRFVETLEEFDAILKEAGDKLVVVDFTASWCGPCKQIGPHFDELSNKAENKNVIFLKVDVDEAQEVAAKWDVRAMPTFIFIKNGQKVRDIIGADRDKL 99
BLAST of NO06G04530 vs. NCBI_GenBank
Match: XP_002183039.1 (thioredoxin h [Phaeodactylum tricornutum CCAP 1055/1] >EEC45257.1 thioredoxin h [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 111.7 bits (278), Expect = 2.400e-21 Identity = 73/172 (42.44%), Postives = 98/172 (56.98%), Query Frame = 0 Query: 14 FLLLAICALVSSFYTAPARAAASAASLLPFHRQHKNKQQQHKSILARLSTTRGGV----------AGKVKEVQTLEETEAALSEAGS--KLVVLDFTATWCGPCKLISPVFDALSEEISTNEAVFLKVDVDVNEGTARKFEVFQMPTFVFVKDGEVKGRLVGANPDKLREAV 174 +LL+A L +F T A + A+ P S A TT GV G+V E ++L + +A + +AGS KLVV+DF+ATWCGPCK+I+P+F LSE I VF+K+DVD N TA K+ V MPTFVF+K GEV RL+GANP +L+E + Sbjct: 4 YLLVAAVMLYGTFMTGDAVQGPAPATKAP------------SSCAAVDDTTLFGVVQRVPALSVRGGQVHEPESLADVDALVLKAGSEGKLVVIDFSATWCGPCKMIAPLFQQLSEAIP--GVVFIKIDVDENPDTAAKYNVSAMPTFVFLKSGEVIDRLMGANPARLQELI 161
BLAST of NO06G04530 vs. NCBI_GenBank
Match: XP_001602650.3 (PREDICTED: thioredoxin-2-like isoform X2 [Nasonia vitripennis]) HSP 1 Score: 110.2 bits (274), Expect = 6.900e-21 Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 0 Query: 78 LEETEAALSEAGSKLVVLDFTATWCGPCKLISPVFDALSEEISTNEAVFLKVDVDVNEGTARKFEVFQMPTFVFVKDGEVKGRLVGANPDKLREAV 174 LEE + L+EAG KLVV+DF ATWCGPCK+I+P D LS+E++ + VFLKVDVD EG A +++V MPTFVF+K+G V + GAN +K++ V Sbjct: 32 LEELKTKLTEAGEKLVVIDFFATWCGPCKMIAPKLDELSQELT--DVVFLKVDVDELEGVAEEYDVNSMPTFVFIKNGSVLDKFSGANIEKVKLTV 125
BLAST of NO06G04530 vs. NCBI_GenBank
Match: OXU24710.1 (hypothetical protein TSAR_004285 [Trichomalopsis sarcophagae]) HSP 1 Score: 109.8 bits (273), Expect = 9.000e-21 Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 0 Query: 78 LEETEAALSEAGSKLVVLDFTATWCGPCKLISPVFDALSEEISTNEAVFLKVDVDVNEGTARKFEVFQMPTFVFVKDGEVKGRLVGANPDKLREAV 174 LEE + L+EAG KLVV+DF ATWCGPCK+I+P D LS+E++ + +FLKVDVD EG A +++V MPTFVF+K+G V + GAN +K++ V Sbjct: 32 LEELKTKLTEAGEKLVVIDFFATWCGPCKMIAPKLDELSQELT--DVIFLKVDVDELEGVAEEYDVNSMPTFVFIKNGNVLDKFSGANIEKVKLTV 125
BLAST of NO06G04530 vs. NCBI_GenBank
Match: XP_008209873.1 (PREDICTED: thioredoxin-2-like isoform X3 [Nasonia vitripennis]) HSP 1 Score: 109.4 bits (272), Expect = 1.200e-20 Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 0 Query: 78 LEETEAALSEAGSKLVVLDFTATWCGPCKLISPVFDALSEEISTNEAVFLKVDVDVNEGTARKFEVFQMPTFVFVKDGEVKGRLVGANPDKLREAV 174 +EE + L+EAG KLVV+DF ATWCGPCK+I+P D LS+E++ + VFLKVDVD EG A +++V MPTFVF+K+G V + GAN +K++ V Sbjct: 1 MEELKTKLTEAGEKLVVIDFFATWCGPCKMIAPKLDELSQELT--DVVFLKVDVDELEGVAEEYDVNSMPTFVFIKNGSVLDKFSGANIEKVKLTV 94 The following BLAST results are available for this feature:
BLAST of NO06G04530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04530 ID=NO06G04530|Name=NO06G04530|organism=Nannochloropsis oceanica|type=gene|length=3408bpback to top protein sequence of NO06G04530.1 >NO06G04530.1-protein ID=NO06G04530.1-protein|Name=NO06G04530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=178bpback to top protein sequence of NO06G04530.2 >NO06G04530.2-protein ID=NO06G04530.2-protein|Name=NO06G04530.2|organism=Nannochloropsis oceanica|type=polypeptide|length=145bpback to top Synonyms
Publications
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