NO06G04490, NO06G04490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04490 vs. NCBI_GenBank
Match: EWM26434.1 (transmembrane protein 97 [Nannochloropsis gaditana]) HSP 1 Score: 261.2 bits (666), Expect = 3.600e-66 Identity = 125/200 (62.50%), Postives = 153/200 (76.50%), Query Frame = 0 Query: 65 GGMSPLLRRVFFLYFATHIPITLLIDAQGVSSAFHPQACKDLLAWYTKEFGDFLMDSPPQWFRSIVACELLFQLPFFFVAVNGFWHGKNSMRLPCLVYGAHVATTLVPILDAFAHASHLTPEQKAILIGIYFPYLLVPLLLVWVMWMHERPFGIEGEVPMGHPKGGDASKCPFASMIGFAAAEGVSVAPLEGGKGGKKER 265 GGM +R +FF YF THIPITL IDAQ + S +HP A +LL WYT+ +GDFLM +PP WF+++VACEL+ QLPFFFVA GFW +N +RLPC+VYG+HVATTLVPILDAFA A HL+ ++K LIGIY PYLLVP++LV +MW +ERPFG+ +P GHPKGGD SKCPFASM+G AAEG+ P + KKER Sbjct: 6 GGMPAFIRWLFFWYFVTHIPITLFIDAQSIFSMYHPPAFTNLLRWYTETYGDFLMANPPPWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPILDAFARAPHLSLDKKITLIGIYSPYLLVPVMLVVIMWRNERPFGM--GLPRGHPKGGDVSKCPFASMMGLTAAEGLE-GPAQDDAVRKKER 202
BLAST of NO06G04490 vs. NCBI_GenBank
Match: XP_002958154.1 (hypothetical protein VOLCADRAFT_108000 [Volvox carteri f. nagariensis] >EFJ40779.1 hypothetical protein VOLCADRAFT_108000 [Volvox carteri f. nagariensis]) HSP 1 Score: 152.9 bits (385), Expect = 1.400e-33 Identity = 77/155 (49.68%), Postives = 105/155 (67.74%), Query Frame = 0 Query: 64 IGGMSPLLRRVFFLYFATHIPITLLIDAQGVSSA-FHPQACKDLLAWYTKEFGDFLMDSPPQWFRSIVACELLFQLPFFFVAVNGFWHGKNSMRLPCLVYGAHVATTLVPILDAFAHASHLTPEQKAILIGIYFPYLLVPLLLVWVMWMHERPFG 218 +G ++ +L R+F YF HIP T+++D+Q V A + P K+LL W+ K GD L+ S P WF S+VACE+L QLPFFFVA F +N +R+PC+VYG+HVATT+VPIL F + P ++ L+ IY PYL+VP+LLV M + ERPFG Sbjct: 1 MGLLTSVLDRIFLAYFILHIPTTVIVDSQSVVPAQYFPSWAKELLQWHIKTNGDHLVSSNPLWFVSLVACEILLQLPFFFVASYAFLKRRNWIRIPCIVYGSHVATTMVPILSEFLFSPEAGP-KRLTLVSIYLPYLVVPVLLVVRMAVVERPFG 154
BLAST of NO06G04490 vs. NCBI_GenBank
Match: XP_013756112.1 (transmembrane protein 97 [Thecamonas trahens ATCC 50062] >KNC51450.1 transmembrane protein 97 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 151.0 bits (380), Expect = 5.200e-33 Identity = 85/164 (51.83%), Postives = 103/164 (62.80%), Query Frame = 0 Query: 71 LRRVFFLYFATHIPITLLIDAQ--GVSSAFHPQACKDLLAWYTKEFGDFLMDSPPQWFRSIVACELLFQLPFFFVAVNGFWHGKNSMRLPCLVYGAHVATTLVPILDAFAHASH--------LTPEQKAILIGIYFPYLLVPLLLVWVMWMHERPFGIEGEVPM 225 L VF +YFA HIP T LIDAQ V + P K+LLA++ + F D L+ PP+WF S+V CE L QLPFFFVAV F +N +R+P ++YGAHVATTLVPIL A+A LTPE +A LI IY PYLLVP+ LV M E PFG G+ M Sbjct: 4 LDAVFLVYFAVHIPTTALIDAQCLPVVAELVPGFAKELLAYHVETFHDPLVADPPRWFVSLVVCEALLQLPFFFVAVYAFVAKRNWIRIPAIIYGAHVATTLVPILAEIAYAEPKADSPGGVLTPELRATLIAIYIPYLLVPITLVVRMACAEHPFGEPGKAKM 167
BLAST of NO06G04490 vs. NCBI_GenBank
Match: XP_020666374.1 (transmembrane protein 97 [Pogona vitticeps] >XP_020666375.1 transmembrane protein 97 [Pogona vitticeps]) HSP 1 Score: 146.7 bits (369), Expect = 9.900e-32 Identity = 75/149 (50.34%), Postives = 93/149 (62.42%), Query Frame = 0 Query: 70 LLRRVFFLYFATHIPITLLIDAQGVSSAFHPQACKDLLAWYTKEFGDFLMDSPPQWFRSIVACELLFQLPFFFVAVNGFWHGKNS-MRLPCLVYGAHVATTLVPIL-----DAFAHASHLTPE---QKAILIGIYFPYLLVPLLLVWVM 210 +L VF LYF THIPITLLID Q + F+P+ + L WYT F D LM PP WFRS + CE QLPFF VA FW GK +R P ++Y HVATTL+PIL F+H H PE ++ L+ IYFPYLL+PLL+++ M Sbjct: 29 VLEWVFALYFLTHIPITLLIDLQALVPDFYPRGLTEWLTWYTAAFKDPLMADPPSWFRSFIYCEAFLQLPFFPVATYAFWKGKRKWIRTPAIIYATHVATTLMPILAHILFHDFSHGKHAGPETLPERLTLLAIYFPYLLIPLLILFSM 177
BLAST of NO06G04490 vs. NCBI_GenBank
Match: XP_015277418.1 (PREDICTED: transmembrane protein 97 [Gekko japonicus]) HSP 1 Score: 146.4 bits (368), Expect = 1.300e-31 Identity = 77/151 (50.99%), Postives = 94/151 (62.25%), Query Frame = 0 Query: 71 LRRVFFLYFATHIPITLLIDAQGVSSAFHPQACKDLLAWYTKEFGDFLMDSPPQWFRSIVACELLFQLPFFFVAVNGFWHGK-NSMRLPCLVYGAHVATTLVPILDAFAH--------ASHLTPEQKAILIGIYFPYLLVPLLLVWVMWMH 213 L R+F LYF +HIP+TLL+DAQ VSS FHP+A DLL WYT F D LM P WF+S V CE+ QLPFF VA FW G +R P +VY HVATTLVP+L F A T ++ L+ +Y PYLL+PLLL+ M +H Sbjct: 9 LERLFALYFLSHIPVTLLLDAQAVSSRFHPRALTDLLKWYTTSFKDPLMAQCPAWFQSFVYCEVFLQLPFFPVAAYAFWKGNCKWIRTPAIVYATHVATTLVPLLAHFLFHDFPDSKPAGPQTWHERLWLLAVYSPYLLIPLLLLVTMLLH 159
BLAST of NO06G04490 vs. NCBI_GenBank
Match: XP_014151104.1 (hypothetical protein SARC_10331 [Sphaeroforma arctica JP610] >KNC77202.1 hypothetical protein SARC_10331 [Sphaeroforma arctica JP610]) HSP 1 Score: 140.6 bits (353), Expect = 7.100e-30 Identity = 68/140 (48.57%), Postives = 91/140 (65.00%), Query Frame = 0 Query: 78 YFATHIPITLLIDAQG-VSSAFHPQACKDLLAWYTKEFGDFLMDSPPQWFRSIVACELLFQLPFFFVAVNGFWHGKNSMRLPCLVYGAHVATTLVPILDAFAHASHLTPEQKAILIGIYFPYLLVPLLLVWVMWMHERPF 217 YFA+HIPITLL+D+Q V + P ++ +WY K F D LM SPP WF+S +ACEL+FQ+P FF+AV G+W+ N +R P +VYGAHV TTLVP+L + QK +L Y PYL++P L+ M+M PF Sbjct: 14 YFASHIPITLLMDSQAIVPPVWIPDFAVEMNSWYIKTFNDPLMASPPIWFQSFIACELIFQIPIFFLAVYGYWNRCNWIRDPLMVYGAHVTTTLVPVLYELYRNDQVEDGQKLVLAAFYIPYLIIPFLITLRMFMCTVPF 153
BLAST of NO06G04490 vs. NCBI_GenBank
Match: XP_013091071.1 (PREDICTED: transmembrane protein 97-like isoform X1 [Biomphalaria glabrata]) HSP 1 Score: 136.3 bits (342), Expect = 1.300e-28 Identity = 71/151 (47.02%), Postives = 100/151 (66.23%), Query Frame = 0 Query: 67 MSPLLRRVFFLYFATHIPITLLIDAQG-VSSAFHPQACKDLLAWYTKEFGDFLMDSPPQWFRSIVACELLFQLPFFFVAVNGFWHGKNS---MRLPCLVYGAHVATTLVPI-----LDAFAHASHLTPE---QKAILIGIYFPYLLVPLLL 206 M+ LL VFF+YF THIPI+LL+D Q + S ++PQ DL WY +E+ D +M SPP WF+S++ CE++ Q PFFF V GF+ G +R PC+VYG HVATTLVPI L+ F+ A+ +P ++ L+G Y PYL++P+L+ Sbjct: 1 MARLLDFVFFVYFLTHIPISLLVDFQALLPSEYYPQQLIDLKTWYCREYRDSMMASPPSWFKSLIICEVI-QFPFFFFGVYGFFKGAKQCRWLRWPCVVYGVHVATTLVPIIGYVLLEDFSKATLPSPRNMTERLTLLGFYSPYLVIPILI 150
BLAST of NO06G04490 vs. NCBI_GenBank
Match: PNH02925.1 (Transmembrane protein 97 [Tetrabaena socialis]) HSP 1 Score: 136.3 bits (342), Expect = 1.300e-28 Identity = 71/152 (46.71%), Postives = 94/152 (61.84%), Query Frame = 0 Query: 66 GMSPLLRRVFFLYFATHIPITLLIDAQGVSSA-FHPQACKDLLAWYTKEFGDFLMDSPPQWFRSIVACELLFQLPFFFVAVNGFWHGKNSMRLPCLVYGAHVATTLVPILDAFAHASHLTPEQKAILIGIYFPYLLVPLLLVWVMWMHERPF 217 G+ +L VF YF HIP T+++D+Q + A + P K+LL W+ K D L+ + P WF S+V CE L QLPFFFV GF N +R+PC++YG HVATT+VPIL P ++ L IYFPYLLVPLLLV M + ++PF Sbjct: 2 GLLGVLDAVFLAYFIIHIPTTIIVDSQSIVPAQYFPVWAKELLQWHIKTNEDHLVSTNPVWFVSLVTCETLLQLPFFFVVAYGFIRRANWIRVPCIIYGTHVATTMVPILADILFGPDSGP-KRLTLFWIYFPYLLVPLLLVLRMALVDKPF 152
BLAST of NO06G04490 vs. NCBI_GenBank
Match: XP_012679539.1 (PREDICTED: transmembrane protein 97 [Clupea harengus]) HSP 1 Score: 135.6 bits (340), Expect = 2.300e-28 Identity = 72/150 (48.00%), Postives = 93/150 (62.00%), Query Frame = 0 Query: 70 LLRRVFFLYFATHIPITLLIDAQG-VSSAFHPQACKDLLAWYTKEFGDFLMDSPPQWFRSIVACELLFQLPFFFVAVNGFWHGK-NSMRLPCLVYGAHVATTLVPILD-----AFAHASHLTPE---QKAILIGIYFPYLLVPLLLVWVM 210 +L ++FLYFA+HIPITL ID Q + +PQA K L+ WY EF D +M PP WF+S + CE L QLPFF VA FW G +R P +VY HVATTLVPIL F A H P+ ++ L+ IY PYL+VP++L++ M Sbjct: 5 ILEIIYFLYFASHIPITLFIDFQALLPEHVYPQALKQLMRWYAAEFKDPMMLDPPVWFKSFILCEALVQLPFFPVAAYAFWKGGCKWIRTPAIVYSTHVATTLVPILSYVLLHQFPQAPHPGPQTMRERLTLVSIYAPYLIVPIMLLFTM 154
BLAST of NO06G04490 vs. NCBI_GenBank
Match: XP_024113863.1 (sigma intracellular receptor 2 [Oryzias melastigma]) HSP 1 Score: 134.8 bits (338), Expect = 3.900e-28 Identity = 72/150 (48.00%), Postives = 93/150 (62.00%), Query Frame = 0 Query: 70 LLRRVFFLYFATHIPITLLIDAQGVSSA-FHPQACKDLLAWYTKEFGDFLMDSPPQWFRSIVACELLFQLPFFFVAVNGFWHGK-NSMRLPCLVYGAHVATTLVPILDAF--------AHASHLTPEQKAILIGIYFPYLLVPLLLVWVM 210 +L +FFLYF++HIPITL ID Q + A +PQ KDLL WY +EF D +M PP+WFRS V CE L Q+PFF +A F G +R P +VY HVATTL+PIL H +P ++ +L+ IY PYLLVP+LL+ M Sbjct: 5 VLELLFFLYFSSHIPITLFIDLQALLPAHLYPQQLKDLLRWYAEEFRDPMMLDPPEWFRSFVFCEALVQMPFFPIAAYAFLKGGCKWIRTPAIVYSTHVATTLLPILSHILFHQFPQTPHPGPQSPRERWLLVSIYAPYLLVPVLLLLTM 154 The following BLAST results are available for this feature:
BLAST of NO06G04490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04490 ID=NO06G04490|Name=NO06G04490|organism=Nannochloropsis oceanica|type=gene|length=943bpback to top protein sequence of NO06G04490.1 >NO06G04490.1-protein ID=NO06G04490.1-protein|Name=NO06G04490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=265bpback to top Synonyms
Publications
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