NO06G04410, NO06G04410 (gene) Nannochloropsis oceanica

Overview
NameNO06G04410
Unique NameNO06G04410
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3839
Alignment locationchr6:1233561..1237399 +

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Properties
Property NameValue
DescriptionAmino acid transport protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1233561..1237399 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO06G04410 vs. NCBI_GenBank
Match: XP_005855412.1 (amino acid transport protein [Nannochloropsis gaditana CCMP526] >EKU20943.1 amino acid transport protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 530.4 bits (1365), Expect = 6.800e-147
Identity = 335/616 (54.38%), Postives = 395/616 (64.12%), Query Frame = 0
Query:    8 QQQSQHDGDGIGNA---TANERS-----SLLLREVSSTESQYSSLGGPATPICSPMTPAFERRGRPGSRKRPRKLQGRAALNINLLTALNGPASFAIPWAFQEAGLAAGVIGVVLVALFSYFTLWFLIRCKRHLSASGSGDAGAARGLKQQEESGDDGGAD--KGKHPAMAVLAPTPXXXXXXXXXXXRRWRGLQDNDGLQQLTYAEIAALSLGAPASSLVKAATCISCLGACAAYATFIAGMLTQLFPVWEEGEVLCGLLPIFVLLSWVRGFRRLSFFNVGGNLSLVVGVLAIFYDGFTRLXXXXXXXXXXXXXXXXXXXXXXXSF------------LEARGIHLLQPQTLFLFFGPTAFLFVIHYC----------------------------------------AVPIESEAEYPEDFTQALGLSMALTAMLDIAVGSAGYIFYGGTSPLVRNPAGQVVAGCERPVCDNVLKNIEAGPLKTIIFAAFSLNLTLTYIIMLAPPREYLEEIVVGSDSLLPTKWQRNILRSLLVTFTFVVASTIHQFGLITAFVGAITDTLQGFILPPLIYAATFAACVSKCEKMLLWAMSGLGVVLMFTATSQNVGELKRLVL 562
            ++ S+H+ + + N    + +ERS     +L++R +SS ESQY+SLGGPATP CS   PA   +     RKRPRKLQG                      AFQEAGLAAGV+GV+ VA FSY TL  LIR KR L  SG   A  AR    +E+   D G +   G+     +                +   G  D     QL+YAE+AAL+LGAPAS LVK ATC+SCLGACAAY TF+AGML QLFP W E  +L  LLP FVLLSWVRGFRRLSF NV GN SLV+G++AIF DGF+RL               XXXXXXXX              L  RGIHL++PQTL LFFGPTAFLFV+HY                                         A+PIESEA+ PEDF +ALGLSM+LTA LD+A+G+AGYIFYGG SPLVR+ AGQVV GCERPVCDNVLKNI  GPLKTIIFAAFS+NLTLTY+IMLAPPREY+EE +V  DS++ +KWQRNI RS+LV FTF+VAS++HQFGLITAFVGAITDTLQGF+LPPLIYAATFA  + K EK L+  MS LG+VLM TAT QN+ EL+ LVL
Sbjct:    2 EETSRHEEEQLKNGDTDSPSERSFLLPTALVVRSLSS-ESQYASLGGPATPSCS---PAAADKESTRLRKRPRKLQG----------------------AFQEAGLAAGVLGVLAVAFFSYTTLLLLIRAKRFL--SGGPPALEARERMGREDKRKDAGVEAVAGEKGGNGLSEAASAAVTVLSSVQDQAGAGPAD----LQLSYAEVAALALGAPASLLVKTATCVSCLGACAAYITFVAGMLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLXXXXXXXXXXXXXXXXXXXXFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYSPRPREFEHAHDLMAVFVDLLPLPETQTLPSLPFLPSALSGALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVL 585          
BLAST of NO06G04410 vs. NCBI_GenBank
Match: XP_005852644.1 (amino acid transport protein [Nannochloropsis gaditana CCMP526] >EKU23189.1 amino acid transport protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 521.9 bits (1343), Expect = 2.400e-144
Identity = 322/576 (55.90%), Postives = 371/576 (64.41%), Query Frame = 0
Query:   40 QYSSLGGPATPICSPMTPAFERRGRPGSRKRPRKLQGRAALNINLLTALNGPASFAIPWAFQEAGLAAGVIGVVLVALFSYFTLWFLIRCKRHLSASGSGDAGAARGLKQQEESGDDGGAD--KGKHPAMAVLAPTPXXXXXXXXXXXRRWRGLQDNDGLQQLTYAEIAALSLGAPASSLVKAATCISCLGACAAYATFIAGMLTQLFPVWEEGEVLCGLLPIFVLLSWVRGFRRLSFFNVGGNLSLVVGVLAIFYDGFTRLXXXXXXXXXXXXXXXXXXXXXXXSF------------LEARGIHLLQPQTLFLFFGPTAFLFVIHYC----------------------------------------AVPIESEAEYPEDFTQALGLSMALTAMLDIAVGSAGYIFYGGTSPLVRNPAGQVVAGCERPVCDNVLKNIEAGPLKTIIFAAFSLNLTLTYIIMLAPPREYLEEIVVGSDSLLPTKWQRNILRSLLVTFTFVVASTIHQFGLITAFVGAITDTLQGFILPPLIYAATFAACVSKCEKMLLWAMSGLGVVLMFTATSQNVGELKRLVL 562
            +Y+SLGGPATP CS   PA   +     RKRPRKLQG                      AFQEAGLAAGV+GV+ VA FSY TL  LIR KR L  SG   A  AR    +E+   D G +   G+     +                +   G  D     QL+YAE+AAL+LGAPAS LVK ATC+SCLGACAAY TF+AGML QLFP W E  +L  LLP FVLLSWVRGFRRLSF NV GN SLV+G++AIF DGF+RL               XXXXXXXX              L  RGIHL++PQTL LFFGPTAFLFV+HY                                         A+PIESEA+ PEDF +ALGLSM+LTA LD+A+G+AGYIFYGG SPLVR+ AGQVV GCERPVCDNVLKNI  GPLKTIIFAAFS+NLTLTY+IMLAPPREY+EE +V  DS++ +KWQRNI RS+LV FTF+VAS++HQFGLITAFVGAITDTLQGF+LPPLIYAATFA  + K EK L+  MS LG+VLM TAT QN+ EL+ LVL
Sbjct:    7 RYASLGGPATPSCS---PAAADKESTRLRKRPRKLQG----------------------AFQEAGLAAGVLGVLAVAFFSYTTLLLLIRAKRFL--SGGPPALEARERMGREDKRKDAGVEAVAGEKGGNGLSEAASAAVTVLSSVQDQAGAGPAD----LQLSYAEVAALALGAPASLLVKTATCVSCLGACAAYITFVAGMLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLXXXXXXXXXXXXXXXXXXXXFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYSPRPREFEHAHDLMAVFVDLLPLPETQTLPSLPFLPSALSGALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVL 551          
BLAST of NO06G04410 vs. NCBI_GenBank
Match: EWM26445.1 (Amino acid transporter, transmembrane [Nannochloropsis gaditana])

HSP 1 Score: 429.5 bits (1103), Expect = 1.600e-116
Identity = 231/334 (69.16%), Postives = 264/334 (79.04%), Query Frame = 0
Query:  240 MLTQLFPVWEEGEVLCGLLPIFVLLSWVRGFRRLSFFNVGGNLSLVVGVLAIFYDGFTRLXXXXXXXXXXXXXXXXXXXXXXXSF------------LEARGIHLLQPQTLFLFFGPTAFLFVIHYCAVPIESEAEYPEDFTQALGLSMALTAMLDIAVGSAGYIFYGGTSPLVRNPAGQVVAGCERPVCDNVLKNIEAGPLKTIIFAAFSLNLTLTYIIMLAPPREYLEEIVVGSDSLLPTKWQRNILRSLLVTFTFVVASTIHQFGLITAFVGAITDTLQGFILPPLIYAATFAACVSKCEKMLLWAMSGLGVVLMFTATSQNVGELKRLVL 562
            ML QLFP W E  +L  LLP FVLLSWVRGFRRLSF NV GN SLV+G++AIF DGF+RL               XXXXXXXX              L  RGIHL++PQTL LFFGPTAFLFV+HYCA+PIESEA+ PEDF +ALGLSM+LTA LD+A+G+AGYIFYGG SPLVR+ AGQVV GCERPVCDNVLKNI  GPLKTIIFAAFS+NLTLTY+IMLAPPREY+EE +V  DS++ +KWQRNI RS+LV FTF+VAS++HQFGLITAFVGAITDTLQGF+LPPLIYAATFA  + K EK L+  MS LG+VLM TAT QN+ EL+ LVL
Sbjct:    1 MLLQLFPAWSERGILLALLPPFVLLSWVRGFRRLSFLNVLGNASLVLGIIAIFLDGFSRLVAPSSSTFPPVSSSLXXXXXXXXXXXXXXXXXXXXFSLSTRGIHLVRPQTLLLFFGPTAFLFVVHYCALPIESEAKRPEDFKRALGLSMSLTAALDVAIGAAGYIFYGGLSPLVRDQAGQVVPGCERPVCDNVLKNISPGPLKTIIFAAFSINLTLTYVIMLAPPREYVEEAMVRGDSIISSKWQRNIWRSVLVIFTFMVASSVHQFGLITAFVGAITDTLQGFVLPPLIYAATFAVWMPKAEKALMITMSTLGIVLMLTATYQNMRELENLVL 334          
BLAST of NO06G04410 vs. NCBI_GenBank
Match: XP_013760390.1 (amino Acid/Auxin Permease family [Thecamonas trahens ATCC 50062] >KNC46617.1 amino Acid/Auxin Permease family [Thecamonas trahens ATCC 50062])

HSP 1 Score: 104.8 bits (260), Expect = 9.300e-19
Identity = 131/545 (24.04%), Postives = 209/545 (38.35%), Query Frame = 0
Query:   20 NATANERSSLLLREVSSTESQYSSLGGPATPICSP-------MTPAFERRGRPGSRKRPRKLQGRAALNINLLTALNGPASFAIPWAFQEAGLAAGVIGVVLVALFSYFTLWFLIRCKRHLSASGSGDAGAARGLKQQEESGDDGGADKGKHPAMAVLAPTPXXXXXXXXXXXRRWRGLQDNDGLQQLTYAEIAALSLGAPASSLVKAATCISCLGACAAYATFIAGMLTQLFPVWEEGEVLCGLLPIFVLLSWVRGFRRLSFFNVGGNLSLVVGVLAIFYDGFTRLXXXXXXXXXXXXXXXXXXXXXXXSFLEARGIHLLQPQTLFLFFGPTAFLFVIHYCAVPIESEAEYPEDFTQALGLSMALTAMLDIAVGSAGYIFYGGTSPLVRNPAGQVVAGCERPVCDNVLKNIEAGPLKTIIFAAFSLNLTLTYIIMLAPPREYLEEIVVGSDSLLPTKW-QRNILRSLLVTFTFVVASTIHQFGLITAFVGAITDTLQGFILPPLIYAATFAACVSKCEKMLLWAMSGLGVVLMFTATSQNVGEL 557
            NA   E     +  V++T S  + + G A+P  SP        TP   R     +++     QG     + L TA  G    A+P+     GL  G+  ++L A  S  TL  L+R +R L+                            KH                                   L  +EI  L+ G   + +   A  ++  G C AY  F+A  L  L P +   E +  + P+F+ LSW+R  R L+  +    + ++V V  +F  GF                             E          +L LF+G  AF F +H   +P ++ A  PE     +  +++   ++  A G  GY+F+G  +  V                  +  N+    L T++  A  + LT T+ I L P    +EE ++ S  L PT W ++N LR++ V     VA  I  FGL ++ +GA + +   FILP L Y   F A ++  +K+L  ++  LG V    AT  +V E+
Sbjct:   16 NAVDAEMGVPQVATVAAT-SSINVVPGQASPTPSPTEHSPLLATPGGGRIHAAEAKEEETPKQGVLPGYMTLTTAFVGGGLLALPFGVAHVGLWLGLGCLILFAAMSGHTLHLLVRTRRKLAP---------------------------KH---------------------------------NVLYLSEIGQLAYGKAGARVASLAAFLTQAGFCCAYTIFVADNLHSLIPRFATHEWVGMVTPVFIALSWLRSLRVLAPTSTLAVVCVMVVVAVVFESGFRH-----------------------EGIRELSSYKAADVTSLPLFWGIAAFGFCVHNLVLPFDASARRPEVSGATINAAVSTVLVIYTAFGLFGYLFFGSATKAV------------------ITLNLPHSVLVTVVKIALCVVLTCTFPIQLFPVTCVMEEALLSSRKLRPTYWLEQNALRAVEVIIISGVAIAIPLFGLFSSLMGAFSVSAVVFILPTLFYLKLFWAELTTWDKILNGSIFVLGAVGSVVATVFDVAEI 458          
BLAST of NO06G04410 vs. NCBI_GenBank
Match: XP_004353685.1 (Transmembrane amino acid transporter protein [Acanthamoeba castellanii str. Neff] >ELR24157.1 Transmembrane amino acid transporter protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 104.0 bits (258), Expect = 1.600e-18
Identity = 108/494 (21.86%), Postives = 196/494 (39.68%), Query Frame = 0
Query:   75 QGRAALNINLLTALNGPASFAIPWAFQEAGLAAGVIGVVLVALFSYFTLWFLIRCKRHLSASGSGDAGAARGLKQQEESGDDGGADKGKHPAMAVLAPTPXXXXXXXXXXXRRWRGLQDNDGLQQLTYAEIAALSLGAPASSLVKAATCISCLGACAAYATF---------IAGMLTQLFPVWEEGEVLCG--------------LLPIFVLLSWVRGFRRLSFFNVGGNLSLVVGVLAIFYDGFTRLXXXXXXXXXXXXXXXXXXXXXXXSFLEARGIHLLQPQTLFLFFGPTAFLFVIHYCAVPIESEAEYPEDFTQALGLSMALTAMLDIAVGSAGYIFYGGTSPLVRNPAGQVVAGCERPVCDNVLKNIEAGPLKTIIFAAFSLNLTLTYIIMLAPPREYLEEIVVGSDSLLPTKWQRNILRSLLVTFTFVVASTIHQFGLITAFVGAITDTLQGFILPPLIYAATFAACVSKCEKMLLWAMSGLGVVLM 546
            QG    + +++ A+ G  SFA+PWAF +AGL  G+IG++++A+ S +T+  LI+CKR L   G  D                                                         + +TY +IA    G   +  + AA  I+ +GAC+AY  F            + T+  P    G +L                L    +L +W+R FR L+F ++ G+++LV+ ++ +F +GF                                  +L  P+    FFG  AFLF +H   VPIE     P++F +A+  S  +  +L++   + GY  +     L +               D ++ N+       +   A   +L  T+I+++ P R+ +E  ++  +    T  +R  +R+++V     +   + QF  +   V  ++ +   F+LPP+++   F A        L W + G+ + L+
Sbjct:   69 QGALQASASIIKAVVGAGSFALPWAFLQAGLFGGMIGILVLAILSCYTIRMLIQCKREL--VGKSD---------------------------------------------------------RYVTYVDIAREVYGRVVAWTLYAAIVITSIGACSAYLVFWYYSSRPSACHPLFTEPVPCPFSGNMLESVSRGKLESMYWVFILAGPLILFTWIRSFRYLAFTSIIGDIALVLAMITMFVEGFKEESVENPFGGEYPPIQ-----------------YLSYPK----FFGAAAFLFCVHMLMVPIEQSMHTPKNFGKAVYGSFLVVTVLNLVFAAIGYEAFDYKYMLYKGATK-----------DIIINNLPDNVFVDVARVALVFDLFFTFIVVIVPARDIIETSLLTPNQRWNT-IKRYAIRTVMVGICVGIGVGVKQFSDLIGLVSGLSLSFMAFVLPPMLHMRLFWA-------RLDWVLIGVDIFLI 463          
BLAST of NO06G04410 vs. NCBI_GenBank
Match: XP_004358231.1 (transmembrane amino acid transporter protein [Acanthamoeba castellanii str. Neff] >ELR25670.1 transmembrane amino acid transporter protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 101.3 bits (251), Expect = 1.000e-17
Identity = 104/447 (23.27%), Postives = 171/447 (38.26%), Query Frame = 0
Query:   83 NLLTALNGPASFAIPWAFQEAGLAAGVIGVVLVALFSYFTLWFLIRCKRHLSASGSGDAGAARGLKQQEESGDDGGADKGKHPAMAVLAPTPXXXXXXXXXXXRRWRGLQDNDGLQQLTYAEIAALSLGAPASSLVKAATCISCLGACAAYATFIAGMLTQL---FPVWEEGEVLCGL--LPIFVLLSWVRGFRRLSFFNVGGNLSLVVGVLAIFYDGFTRLXXXXXXXXXXXXXXXXXXXXXXXSFLEARGIH---LLQPQTLFLFFGPTAFLFVIHYCAVPIESEAEYPEDFTQALGLSMALTAMLDIAVGSAGYIFYGGTSPLVRNPAGQVVAGCERPVCDNVLKNIEAGPLKTIIFAAFSLNLTLTYIIMLAPPREYLEEIVVGSDSLLPTK---WQRNILRSLLVTFTFVVASTIHQFGLITAFVGAITDTLQGFILPPLIY 519
            N+     G ASF +PWA ++ GL  G +G+V + + S FTL  L +C  HL++                            +P                                   TY +I   + G     L       S +GAC +Y  FI   + +L   +    E   +C L  +P  ++LSW+R ++ L+  ++ G  +L+  ++A + D                             + EA+  +    +Q  +  LF G  AFL++IH   +P E        F   +G S+    +L++A     Y+FYG  +                    NV+ N+  G ++ ++    SL+L  T  + L P  E LE  ++       ++    QRN+LR ++V  T  VA  I  F ++T   G     L GF+LPP IY
Sbjct:   69 NITKCFIGAASFELPWAVKQGGLIGGSVGLVFLGIISQFTLVILAKC-GHLASK--------------------------SYP-----------------------------------TYPDIGREAFGKTGVILAWTGIIASTIGACGSYLIFIGSSIQKLLGGYTAVFEYSAVCTLFVIPPVIMLSWLRSYKVLAPTSILGICALLFSLVATWID--------------------------IGMYHEAKSFNDYPAVQITSYPLFLGNAAFLYLIHSVVLPTEQSMANKSRFPVVVGTSIVFVTILNVAFAVTAYLFYGEDTK------------------QNVIDNLHPGVMEILVRIFLSLDLLFTAALFLFPTSEILEFALLDRTLFGKSRNVEMQRNLLRFIMVMVTAAVALAIPFFSVMTGLTGVFGSNLLGFLLPPSIY 409          
BLAST of NO06G04410 vs. NCBI_GenBank
Match: CEM39819.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 97.8 bits (242), Expect = 1.100e-16
Identity = 83/319 (26.02%), Postives = 135/319 (42.32%), Query Frame = 0
Query:  201 TYAEIAALSLGAPASSLVKAATCISCLGACAAYATFIAGMLTQLFPVWEEGEVLCGLLPIFVLLSWVRGFRRLSFFNVGGNLSLVVGVLAIFYDGFTRLXXXXXXXXXXXXXXXXXXXXXXXSFLEARGIHLLQPQTLFLFFGPTAFLFVIHYCAVPIESEAEYPEDFTQALGLSMALTAMLDIAVGSAGYIFYGGTSPLVRNPAGQVVAGCERPVCDNVLKNIEAGPLKTIIFAAFSLNLTLTYIIMLAPPREYLEEIVVGSDSLLPT-KWQRNILRSLLVTFTFVVASTIHQFGLITAFVGAITDTLQGFILPPLIY 519
            TY +I   + G   S +V+    I+  G C AY  FI   L  +F     GE++   LP+ VLL W+R  R L++ ++  + + + G+  +++    RL                              + + +  TL  FFG   + F      +PIE+  +  + F +   L+M L   L I+ G  GY  +G  +  +                  V  N+    +  ++  A SL L LTY IML P  E LEE +     L+ T  W+ N+LR+ LV  T +V+  +  F +  + VG+   T   F+LP L +
Sbjct:  270 TYGDIGWHAFGKTGSVVVEVFLVITQTGFCIAYLIFIGENLANVFHFVSFGEIVMYCLPLLVLLCWLRDMRHLAWSSLLADATNLFGLGVVYFFDLHRLVAVRKAPP---------------------AVAIARSSTLPFFFGVGLYCFEGIGMVLPIENSMKDKQHFKKLWSLNMLLVTTLFISFGLLGYCAFGSDTDEI------------------VTHNLPHNVISVLVRGALSLGLFLTYPIMLVPVFEILEETLCKDQRLVGTCSWKGNLLRASLVVLTGMVSVAVPNFNIFISLVGSSASTCLAFLLPALFH 549          
BLAST of NO06G04410 vs. NCBI_GenBank
Match: XP_009493479.1 (hypothetical protein H696_01310 [Fonticula alba] >KCV71901.1 hypothetical protein H696_01310 [Fonticula alba])

HSP 1 Score: 95.9 bits (237), Expect = 4.300e-16
Identity = 84/323 (26.01%), Postives = 140/323 (43.34%), Query Frame = 0
Query:  198 QQLTYAEIAALSLGAPASSLVKAATCISCLGACAAYATFIAGMLTQLFPVWEEGEVLCGLLPIFVLLSWVRGFRRLSFFNVGGNLSLVVGVLAIFYDGFTRLXXXXXXXXXXXXXXXXXXXXXXXSFLEARGIHLLQPQTLFLFFGPTAFLFVIHYCAVPIESEAEYPEDFTQALGLSMALTAMLDIAVGSAGYIFYGGTSPLVRNPAGQVVAGCERPVCDNVLKNIE-AGPLKTIIFAAFSLNLTLTYIIMLAPPREYLEEIVVGSDSLLPTKW-QRNILRSLLVTFTFVVASTIHQFGLITAFVGAITDTLQGFILPPLIY 519
            ++LTY ++A    G   S  V      + LG  A+Y  F+   +   +P +   +       I + ++W+R  + LS+ +V G L LVVG++     GF                            L      L++  T F  FG  AFLF I +  +PIE    YP  F   L LS+A  ++ +I     GY+F+G                    +C N+L N+     L  +I  A  ++L  TY ++ +  RE +E  ++    +    + +R  +R++LV  TF +A  +  FGLIT  VG +  +L  F+ PP+++
Sbjct:  194 RELTYVDLAREVFGPSLSVGVFLLLIFASLGVSASYIVFVGDTMHDAYPRFSSFDYKLVTTLIILPITWLRTLKALSYTSVVGTLCLVVGMVVTMVYGFDH----------------------HLDDLRTADPTLIRFDTYFHSFGSVAFLFCISFLVLPIERSMRYPRRFWLPLALSVAFVSLSNIVFAILGYLFFG------------------EDICSNILHNLTIPSVLVDVIKVAICIDLIFTYPLIFSAGREIVENALLRPGVVHSLDYLKRCGIRTVLVALTFGLAQ-VKSFGLITNLVG-VPMSLLAFVCPPMMH 474          
BLAST of NO06G04410 vs. NCBI_GenBank
Match: XP_002682276.1 (amino acid transport protein [Naegleria gruberi] >EFC49532.1 amino acid transport protein [Naegleria gruberi])

HSP 1 Score: 94.0 bits (232), Expect = 1.600e-15
Identity = 106/498 (21.29%), Postives = 204/498 (40.96%), Query Frame = 0
Query:   82 INLLTALNGPASFAIPWAFQEAGLAAGVIGVVLVALFSYFTLWFLIRCKRHLSA----SGSGDAGAARGLK----QQEESGDDGGADKGKHPAMAVLAPTPXXXXXXXXXXXRRWRGLQDNDGLQQ----LTYAEIAALSLGAPASSLVKAATCISCLGACAAYATFIAGMLTQLFPVWEEGEVLCGLLPIFVLLSWVRGFRRLSFFNVGGNLSLVVGVLAIFYDGFTRLXXXXXXXXXXXXXXXXXXXXXXXSFLEARGIHLLQPQTLFLFFGPTAFLFVIHYCAVPIESEAEYPEDFTQALGLSMALTAMLDIAVGSAGYIFYGGTSPLVRNPAGQVVAGCERPVCDNVLKNIEAGPLKTIIFAAFSLNLTLTYIIMLAPPREYLEEIVVGSDSLLPTKWQRN-------------ILRSLLVTFTFVVASTI-HQFGLITAFVGAITDTLQGFILPPLIYAATFAACVSKCEKMLLWAMSGLGVVLMFTATSQNV 554
            +NL     G ++FA+PW+F+++GL  GV+ V+ +A+ S +T+  LI+C+R++ +      S +    R ++     ++E  D+G       P        P              + +  ND + +    +TY +I   ++G   S LV     +  +G    Y   +AG L  + P       +   +P+F++LSW+R ++ L+   + G ++L++ + ++   GF                             E   +  ++P TL L  G   FLF  H   + IE   +  + +   L  S     ++++  G   + F+                  E+   +N+ +N        II +   L + LTY ++L P  E  +E ++        ++ +N             + RSL+V  T  +A     +FG++ +F+GA++     F+LPPL Y       +S    +L   +   GV+ M   T  ++
Sbjct:   94 LNLTKTFAGASTFALPWSFKQSGLLTGVLIVLFLAILSNYTMKLLIKCRRYIQSQEEYKESSEYWKIRPVRLPISHKKELNDEGKLI--NLPIYPKKHSPPKTIDENGEIITTIEKSIDPNDYIYEQDRIITYIDIGYEAMGNFGSILVYVLMVMCNVGVGTIYLVLMAGCLNGMVPEVPLRVWMLFFIPLFIVLSWIRSYKYLAPLTMIGTIALLLALGSVLVYGFIYQRHNMKWPW------------------EYAHVAWIEPSTLPLCIGNVMFLFCTHTMMLSIEQSMKTRKRYYTTLNFSFIFVVIVNLTFGLLVFEFF--------------PYNIEQSATENLPQN---SIFVYIIQSCLCLEVILTYTVVLMPVGELFDEKILQKLLEKLKRFVKNQKFSKFLYFLLSVLFRSLIVVITVGLAEVFGDRFGVVMSFIGALSPNPLAFVLPPLFYLIIMRKTISLPTFILNAFIIVFGVLTMVWNTYSSI 554          
BLAST of NO06G04410 vs. NCBI_GenBank
Match: OSX73906.1 (hypothetical protein BU14_0320s0017 [Porphyra umbilicalis])

HSP 1 Score: 89.4 bits (220), Expect = 4.000e-14
Identity = 141/429 (32.87%), Postives = 184/429 (42.89%), Query Frame = 0
Query:   90 GPASFAIPWAFQEAGLAAGVIGVVLVALFSYFTLWFLIRCKRHLSASGSGDAGAARGLKQQEESGDDGGADKGKHPAMAVLAPTPXXXXXXXXXXXRRWRGLQDNDGLQQLTYAEIAALSLGAPASSLVKAATCISCLGACAAYATFIAGM--LTQLFPVWEEGEVLCGLLPIFVLLSWVRGFRRLSFFNVGGNLSLVVGVLAIFYDGFTRLXXXXXXXXXXXXXXXXXXXXXXXSFLEARGIHLLQPQTLFLFFGPTAFLFVIHYCAVPIESEAEYPEDFT-QALGLSMALTAMLDIAVGSAGYIFYGGTSPLVRNPAGQVVAGCERPVCDNVLKN-IEAGPLKTIIFAAFSLNLTLTYIIMLAPPREYLEEIVVGSDSLLPTKWQRNILRSLLVTFTFVVASTIHQFGLITAFVGAITDTLQGFILP 515
            G ASF +PWAF  AGL   V  VV V   S +T+  L+  +R L     GDA     L       D      G  PA    AP  XXXXXXXXXXX       D D      YA +AA +LG  A + V+ ATC+SC+GACA Y  FIAG+              V+  LLP  V LS V+ +  L+  ++ GN++                XXXXXXXXXXXXXXXXXXXXXXX  +         P    L FGPT FLF +HY AVP+ S      DF    L  +  +   +++   +A  + Y G                   V DN+ +N +E G L             ++  +                       W     R+ L   T  VA+ +  F  +TA  G ++D    F+LP
Sbjct:   55 GAASFGLPWAFARAGLGVSVAMVVAVGGLSAYTIRLLLETRRRL-----GDAPPLPPLPPPAADHD------GCLPAWQA-APXXXXXXXXXXXXXXXXXXXPDAD------YATMAAATLGPAAGAYVRLATCVSCIGACAGYVAFIAGVXXXXXXXXXXXXXAVMVWLLPALVALSQVQTWAHLAAASLAGNVAFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVPTVA-PWATPGAWALAFGPTTFLFTVHYVAVPLASTVGVAGDFEGLVLPAAFGVCVAVNVVFAAACAVAYAGVG-----------------VADNIFRNYVEKGLLGD--------RADVSPAVXXXXXXXXXXXXXXXXXXXXXXXWAERCTRAGLAATTVAVAAAVPHFARLTALAGGVSDASLAFVLP 439          
The following BLAST results are available for this feature:
BLAST of NO06G04410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855412.16.800e-14754.38amino acid transport protein [Nannochloropsis gadi... [more]
XP_005852644.12.400e-14455.90amino acid transport protein [Nannochloropsis gadi... [more]
EWM26445.11.600e-11669.16Amino acid transporter, transmembrane [Nannochloro... [more]
XP_013760390.19.300e-1924.04amino Acid/Auxin Permease family [Thecamonas trahe... [more]
XP_004353685.11.600e-1821.86Transmembrane amino acid transporter protein [Acan... [more]
XP_004358231.11.000e-1723.27transmembrane amino acid transporter protein [Acan... [more]
CEM39819.11.100e-1626.02unnamed protein product [Vitrella brassicaformis C... [more]
XP_009493479.14.300e-1626.01hypothetical protein H696_01310 [Fonticula alba] >... [more]
XP_002682276.11.600e-1521.29amino acid transport protein [Naegleria gruberi] >... [more]
OSX73906.14.000e-1432.87hypothetical protein BU14_0320s0017 [Porphyra umbi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL088nonsL088Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR049ncniR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR144ngnoR144Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000018NSK000018Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04410.1NO06G04410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605155gene_9614Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100580g3gene4083Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04410.1NO06G04410.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04410 ID=NO06G04410|Name=NO06G04410|organism=Nannochloropsis oceanica|type=gene|length=3839bp
CAGCTTGGCATACACGCTGTGTCTTTTTTGGAGGGATTCATTGCAGGGGG
AATGGGGAGGGATTTGAGTCTGAGGATTAACTGTCAATTCGTGACAGCTA
TCGCCGCCAGAATTGCATGCTTATCCGCGTACAAACTTCTGCACCATCAC
AAGAGAACACAAGCAAGGCAGCAACTTAAAACGTAGAGAACAACGCCAGT
TCTCGTCCTATTGTCCAACTGCCTGCCTGCCCACGTCTTTCCCTTGCTCT
CCTCCTCGCTTGCTTCAGCCGCACGGCATCGAGCCCTCAACGGAGAAACC
CGGCCATGCCGGACCAGCGCCACTACCAGCAACAGTCGCAGCACGACGGC
GATGGCATTGGCAATGCCACCGCGAACGAGCGCTCCTCCCTTCTTCTGCG
CGAGGTCTCTTCGACTGAGAGCCAGgtagggaggttggaagagggagcat
ctgattcccatgtatgattagctatagacgtcgttgcagcggagcagtga
ctgtcagtatgatgacagtttaagctgctgtaggtactcatcataggcat
gcattcatcctctctcctcccttccccctttcctcctcttccctctccct
ttcaccctgaatagTACTCAAGTCTTGGAGGGCCGGCCACCCCCATCTGC
TCGCCCATGACGCCCGCATTTGAAAGGAGAGGAAGACCAGGAAGTAGGAA
ACGGCCGAGAAAGCTGCAGGGgtaggaaggggggggaaaggggggaagag
ggacagacgggccatgtgaagggaaggcgggaggtgaatgacggtaaccg
aggcgtcggtggaagcgtattgcctactcaaattctcacttgtcgttctt
ttcttccttcttcataccaatctacagAAGGGCGGCCCTTAACATCAATC
TTTTGACGGCCCTCAATGGCCCAGCGTCTTTTGCCATCCCCTGgtaggga
ggatggaggagaggggagggagggagggagagagggagggggggaggaaa
ggcatgctcgtgatgcctgcgtgcgggaagatcaaggcttattttcatgt
cccctctttatctctggccctggtagGGCGTTTCAAGAAGCAGGGTTGGC
GGCGGGTGTGATCGGCGTAGTCTTAGTCGCCCTCTTCTCCTACTTCACCC
TGTGGTTCCTCATCCGgtgcgtcagtggaatggaaggagggagggaagaa
ggacggaatcttacttatttatccactcacacacacacacctagTTGCAA
GCGGCATCTATCCGCAAGCGGCAGCGGTGATGCGGGGGCTGCTAGAGGTC
TGAAGCAGCAGGAGGAGAGTGGGGACGACGGCGGTGCTGACAAAGGGAAA
CACCCCGCGATGGCGGTACTGGCGCCGACTCCCCTGCCACCATCACAGCA
ACAGCAGCAGCAGTTGCGGCGATGGAGGGGGTTGCAAGATAATGACGGGC
TGCAGCAGCTGACGTATGCGGAGgtaagaaacgaatttcctgctgtgggc
gaggaggggaaaggtagagggaaaaataaaaggaatgacttgaagtggaa
ttagccattcgggccgaaagaagacggtgtccgtgttgctaatgcttgca
tgagtacttactaaaatacatcaatactgcccacactacgacatggcgat
atgcattcttcccgtatgtccattgattcgtttttccatcatctccctcc
taatcatccttcaaatcctcctactcctcgctttcctttcatcctccacc
acctccaccatcaccaccatcccttccatacacccctgcagATCGCCGCC
CTTTCCCTCGGCGCTCCTGCATCTTCCCTGGTCAAGGCCGCCACCTGCAT
CTCCTGCTTGGGTGCCTGTGCTGCCTACGCGACCTTCATCGCCGGGATGC
TCACGCAGCTGTTTCCAGTCTGGGAGGAGgtaaggcgggagggagggctg
gaaggaggagatgtccagaagattgaatctctaagtgtgttttttttggg
ggggctacagtcacccattaaattaaacgcccacataacttgtagGGAGA
GGTCCTCTGTGGTCTCCTTCCCATCTTCGTCCTCCTGTCCTGGGTGCGGG
GGTTCCGGCGCTTATCCTTTTTTAACGTTGGGGGCAATCTTTCGCTCGTT
GTCGgtgaggcggagggagggaaggagggagggagggagggagaatgaag
gggatgaagggaggtagaggtaatggcaggagggaagggggacgtcacgt
ccgtatccaccttccgtgtatgaacattctcgtcctatgcgcatgtattt
atctacccctgcagGCGTCCTGGCCATCTTCTACGACGGGTTTACGCGGC
TTGCTGCCTCCTCTTCTGCATCCTCCCCGCCCTCCTCCCCTGTCATCCCT
CCTCCCTCCTCTTCCTCTCCCTCCTTTTTGGAAGCCCGCGGCATCCACCT
CCTCCAGCCCCAGACCCTCTTCCTTTTCTTTGGTCCCACAGCCTTCCTCT
TTGTCATCCATTACTgtatgttggctaagcgtgggaagagaggcagggtg
ggagggaggggtggagtcgcatgagcgtatgaatggggtttctctctacg
taaccttgcattttcgtcttgcgtcatggattgacatttgtaccggtaaa
ttcctcctcttcttccctctttctctccctccagGCGCCGTCCCCATTGA
GTCCGAAGCCGAGTACCCGGAGGACTTTACGCAGGCTCTTGGCCTTTCCA
TGGCCCTGACAGCAATGCTGGACATAGCCGTCGGgtgagctaggaaaatt
aagaggatgaattacggggggaaggaaggcctcgggattataaacgtatc
actcacgattcttacaaatatgttcacagTTCTGCGGGCTATATTTTCTA
TGGTGGGACCTCTCCCTTGGTGCGCAACCCGGCGGGACAGGTGGTGGCTG
GATGTGAGCGGCCAGTGTGCGACAATGgtatgtggaagggtattgacggc
gctggaattgtatatgtgtgtatatatattaccttgcagctacgtagggc
ttttgtgcgcggttgtgtgagtgattgcggcccggaccaacctcactttt
agcgttcattttgttattgcgtgtagtctccaaccaaagcactcacgccc
atgcacaccctcccgctctatgactggctagTACTGAAAAATATCGAAGC
CGGACCCCTCAAGACCATCATTTTCGCCGCCTTTTCCCTCAACCTCACGC
TTACCTACATTATCATGCTGGCTCCACCGCGCGAGTACCTGGAAGAGATC
GTTGTTGGCAGCGACAGgtacgattcgcgtggaaaggcggagactaggtg
ggaatgcacgatagtgaagaagggatgcaggtgaagaatatgtgcgcgta
accgcgctaagaacgccggtatcacttacaagcccatgtcccaattcata
cacaacgcatcgcagTCTTCTCCCAACAAAGTGGCAACGCAACATCTTGA
GGTCCCTCCTTGTCACATTCACCTTTGTAGTCGCTTCGACCATCCATCAG
TTCGGCCTAATCACAGCTTTTGTGGGCGCAATAACCGACACTCTCCAAGG
ATTTATCCTCCCGCCTTTGATTTATGCAGCGACATTTGCTGCTTGTGTAT
CTAAATGCGAGAAGATGCTCTTGTGGGCCATGAGTGGATTGGGCGTGGTG
TTGATGTTTACTGCGACCTCTCAAAATGTTGGGGAGCTGAAGCGCCTGGT
CCTCGACAATATTAATCAGAAGTTCTAAGCGGCTGAGAAGAAAATAAGAC
AAATATAAAAAAGAAATAACTGTCTGGTACTACTGTTCA
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protein sequence of NO06G04410.1

>NO06G04410.1-protein ID=NO06G04410.1-protein|Name=NO06G04410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=569bp
MPDQRHYQQQSQHDGDGIGNATANERSSLLLREVSSTESQYSSLGGPATP
ICSPMTPAFERRGRPGSRKRPRKLQGRAALNINLLTALNGPASFAIPWAF
QEAGLAAGVIGVVLVALFSYFTLWFLIRCKRHLSASGSGDAGAARGLKQQ
EESGDDGGADKGKHPAMAVLAPTPLPPSQQQQQQLRRWRGLQDNDGLQQL
TYAEIAALSLGAPASSLVKAATCISCLGACAAYATFIAGMLTQLFPVWEE
GEVLCGLLPIFVLLSWVRGFRRLSFFNVGGNLSLVVGVLAIFYDGFTRLA
ASSSASSPPSSPVIPPPSSSSPSFLEARGIHLLQPQTLFLFFGPTAFLFV
IHYCAVPIESEAEYPEDFTQALGLSMALTAMLDIAVGSAGYIFYGGTSPL
VRNPAGQVVAGCERPVCDNVLKNIEAGPLKTIIFAAFSLNLTLTYIIMLA
PPREYLEEIVVGSDSLLPTKWQRNILRSLLVTFTFVVASTIHQFGLITAF
VGAITDTLQGFILPPLIYAATFAACVSKCEKMLLWAMSGLGVVLMFTATS
QNVGELKRLVLDNINQKF*
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Synonyms
Publications