NO06G04380, NO06G04380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04380 vs. NCBI_GenBank
Match: XP_005854764.1 (short chain dehydrogenase [Nannochloropsis gaditana CCMP526] >XP_005855408.1 short chain dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU20939.1 short chain dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU21591.1 short chain dehydrogenase [Nannochloropsis gaditana CCMP526] >EWM26458.1 short chain dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 429.1 bits (1102), Expect = 1.100e-116 Identity = 219/261 (83.91%), Postives = 237/261 (90.80%), Query Frame = 0 Query: 33 MTVGKYLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMGPLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVRK 294 MT GKYL+IGGTGGIGRMLANRLVMKYHKVHLISRHQDQL LASSLHAP DT TH+GVEGTVGFTDVDVTDT ALEKAIK MGPLNGLAYCVGSINLKPLKATT++DF++AF LNT+GAATAIRAALPGL AQ+K +GEAGSVVLFSS+AVQQGFPNHAIIS KG +EGLTRALAAELAP++RVNAVAPSLTDTPLAQVLTRS PMKEAIAKAHPIPRLG+GDDA DN++SSW+TGQI+GVDGGRSVVRK Sbjct: 1 MTAGKYLVIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLNHLASSLHAPGDTG--THTGVEGTVGFTDVDVTDTAALEKAIKGMGPLNGLAYCVGSINLKPLKATTSDDFLQAFMLNTLGAATAIRAALPGLSAQYKKSGEAGSVVLFSSVAVQQGFPNHAIISACKGGVEGLTRALAAELAPSVRVNAVAPSLTDTPLAQVLTRSQPMKEAIAKAHPIPRLGRGDDAAAAAAFLLDNSESSWITGQIVGVDGGRSVVRK 259
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_108177721.1 (SDR family NAD(P)-dependent oxidoreductase [Phreatobacter oligotrophus] >PTM54944.1 NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) [Phreatobacter oligotrophus]) HSP 1 Score: 222.6 bits (566), Expect = 1.600e-54 Identity = 133/256 (51.95%), Postives = 161/256 (62.89%), Query Frame = 0 Query: 38 YLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMGP-LNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 YLI GG GGIG LA RL K + VHL+SR D+L LA + A +T DVTD A+ A + GP L GLAYCVGSINLKP+ T DF F++N +GA A++AALP L A GE S++L S++AV QGF HA +S +KGA+EGLT ALAAELAP IRVN VAPSLT TPLAQ LT + M +AIA H IPRLG+ DD D D+ W+TGQI+GVDGGRS++R Sbjct: 5 YLIYGGAGGIGSALARRLRAKGYGVHLVSRDADRLAALAGEIGAT----------------WTAADVTDREAIATATAAAGPSLAGLAYCVGSINLKPVARLTDADFTRDFEINALGAVRAVQAALPALKAYE---GETASILLVSTVAVAQGFSAHASVSMAKGAVEGLTVALAAELAPKIRVNCVAPSLTRTPLAQGLTSNETMAKAIAALHAIPRLGEADDVAALGALLLD-RDAGWITGQIIGVDGGRSMLR 240
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_094456103.1 (SDR family NAD(P)-dependent oxidoreductase [Niveispirillum lacus] >OYQ34831.1 short-chain dehydrogenase [Niveispirillum lacus]) HSP 1 Score: 214.5 bits (545), Expect = 4.300e-52 Identity = 127/258 (49.22%), Postives = 162/258 (62.79%), Query Frame = 0 Query: 38 YLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMGP---LNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 Y+IIG TGG GR LA RL + H++HLI R +L DL+ +L A TH+ DVT+ AL A+ + G+AYCVGSI +KPLKAT + DF+ AF LN +GAATA+RAA GL A G+VVLFS++AV+QGF NH +I+ +KGA+ GL RALAAE AP +RVN +APSLT TPLA L S M + IA HP+PRLG+ DD + D+ W+TGQ+L VDGGRS +R Sbjct: 5 YIIIGATGGTGRALARRLANRGHRLHLIGRDSTRLADLSQTLDA-------THA---------VADVTEEDALTDAVLRADQGDGIAGIAYCVGSIVIKPLKATRSADFLSAFNLNLLGAATALRAAEKGLKA------AKGAVVLFSTVAVEQGFTNHTVIAAAKGAVAGLGRALAAEWAPHVRVNVIAPSLTRTPLAAPLLASEQMAQGIAAMHPLPRLGEADDLAAMAEFLL-SPDAGWITGQVLAVDGGRSTLR 239
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_043336324.1 (KR domain-containing protein [Belnapia moabensis]) HSP 1 Score: 211.1 bits (536), Expect = 4.700e-51 Identity = 124/254 (48.82%), Postives = 159/254 (62.60%), Query Frame = 0 Query: 40 IIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMG-PLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 I+G TGGIG LA RL + +HLI R +L LA LHAP+ DVTD AL+ AI + G PL GLA+C+GSI +KPL DF E F LN AA A++AA P L A G+ GSVVLFSS+A + GFP HA+I +K A+EGL+ ALAAELAP++RVN +APSLT T +A +T++ M +AIAK HPIPRLG+ +DA ++ S W+TGQ++GVDGGRS +R Sbjct: 7 ILGATGGIGGALARRLAARGAPLHLIGRDATRLAALAEELHAPS----------------AACDVTDPAALKAAIAAAGTPLAGLAFCIGSIVMKPLARANAADFAETFALNATAAALAVQAAAPAL-----AAGQ-GSVVLFSSVAARAGFPGHAVIGAAKAAVEGLSLALAAELAPSVRVNCIAPSLTRTGIATPMTKNPQMADAIAKLHPIPRLGEAEDAAALADFLL-SDASGWITGQVIGVDGGRSSLR 237
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_046142216.1 (KR domain-containing protein [Devosia soli] >KKB80153.1 short-chain dehydrogenase [Devosia soli]) HSP 1 Score: 210.7 bits (535), Expect = 6.200e-51 Identity = 127/255 (49.80%), Postives = 162/255 (63.53%), Query Frame = 0 Query: 39 LIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAI-KSMGPLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 +I+GGTGGIG LA ++ + HLI R DQL LAS L +GT +++ DVTD AL A+ ++ GP+ GLAYCVG+INLKPL ++F F +N GAA AI+AALP L K S+VLFSS+AV QGF HA IS +KGA+EGLT ALAAELAP IRVNA+APSLT TPLA+ LT + M ++IA+ H + RLG +D+ ++ S W+TGQIL VDGGRS +R Sbjct: 6 IIVGGTGGIGSALARKVAARGQSPHLIGRKTDQLASLASEL--------------DGT--WSEADVTDVQALTSAVQEASGPVAGLAYCVGTINLKPLARLNADEFARDFSINAQGAAIAIQAALPAL----KVYDGICSIVLFSSVAVAQGFSGHASISMAKGAVEGLTVALAAELAPKIRVNAIAPSLTATPLAEALTSNEAMAKSIAQLHALGRLGTAEDSAAAADFLL-SDQSGWITGQILRVDGGRSSLR 239
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_061910545.1 (KR domain-containing protein [Devosia sp. Leaf420] >KQT46028.1 short-chain dehydrogenase [Devosia sp. Leaf420]) HSP 1 Score: 209.9 bits (533), Expect = 1.100e-50 Identity = 130/255 (50.98%), Postives = 162/255 (63.53%), Query Frame = 0 Query: 39 LIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAI-KSMGPLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 +I+GG GGIG LA + + HLI R D L LA GT + + +VTDT AL AI ++ GP+ GLAYCVG+INLKPL T DF F +N GAA +I+AALP L Q++ T S+VLFSS+AV QGF HA IS +KGA+EGLT ALAAELAP IRVNAVAPSLT TPLA+ LT + M ++IA+ H +PRLG +D+ ++ SSW+TGQILGVDGGRS +R Sbjct: 6 IIVGGAGGIGSALAKKTAARGLVPHLIGRSPDALAALADE--------------TGGT--WAEANVTDTTALTAAIQQAPGPVAGLAYCVGTINLKPLARLTIEDFARDFAINAAGAAMSIQAALPAL-KQYEGT---ASIVLFSSVAVAQGFSGHASISMAKGAVEGLTVALAAELAPKIRVNAVAPSLTATPLAESLTSNEAMAKSIAQLHALPRLGTAEDSANAADFLL-SDASSWITGQILGVDGGRSTLR 239
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_106749149.1 (SDR family NAD(P)-dependent oxidoreductase [Phreatobacter sp. S-12] >AVO45808.1 short-chain dehydrogenase [Phreatobacter sp. S-12]) HSP 1 Score: 209.9 bits (533), Expect = 1.100e-50 Identity = 125/256 (48.83%), Postives = 159/256 (62.11%), Query Frame = 0 Query: 38 YLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMGP-LNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 +LI GGTGGIG LA RL + H VHL++R +D+L LA+ + A F+ DV D A+ A G L GLAYCVGSINLKP+ T DF F++N +GA A++A+LP L G S++L S++AV QGF HA +S +KGA+EGLT ALAAELAP IRVN VAPSLT TPLA+ LT + M AIA H IPRLG+ DD D +++ W+TGQI+GVDGGRS++R Sbjct: 5 FLIYGGTGGIGSALARRLRGRGHAVHLVARDRDRLEALAAEIGAT----------------FSVADVADPAAITAAATEAGDRLAGLAYCVGSINLKPVARLTDADFTRDFEVNALGAVRAVQASLPALKGHE---GPTSSILLVSTVAVAQGFAAHASVSMAKGAVEGLTVALAAELAPKIRVNCVAPSLTRTPLARGLTSNETMANAIAALHAIPRLGEPDDVAALGALLLD-SEAGWITGQIIGVDGGRSMLR 240
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_018409663.1 (SDR family oxidoreductase [Methylocystis rosea]) HSP 1 Score: 209.5 bits (532), Expect = 1.400e-50 Identity = 124/256 (48.44%), Postives = 163/256 (63.67%), Query Frame = 0 Query: 38 YLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMGP-LNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 YLI GG+G IG LA RL + H VHL+ R + +L LA+ + A F+ DVT+ L +A ++ GP L+GLAYCVGSINLKPL T DFI F++N +GAA +++ ALP L A+ A SV+LFS+IAV QGF HA I+ +KGA+EGLT +LAAELAP +RVN +APSL TPLA+ L S M AIA+ H + RLG+ DD ++++SW+TGQI+GVDGGRS +R Sbjct: 3 YLIYGGSGAIGSALARRLRHRGHSVHLVGRSEAKLAALATEIDA----------------SFSIADVTNAAGLAEATEAAGPELSGLAYCVGSINLKPLAKLTEADFIADFRVNALGAALSLKNALPALKAREVA---PASVLLFSTIAVTQGFTGHASIAMAKGAVEGLTLSLAAELAPKVRVNCIAPSLIRTPLAKALLASDQMAGAIAQMHALQRLGEPDDVAALGAFLL-SDEASWITGQIMGVDGGRSTLR 238
BLAST of NO06G04380 vs. NCBI_GenBank
Match: OYU49013.1 (short-chain dehydrogenase [Rhizobiales bacterium PAR1]) HSP 1 Score: 209.5 bits (532), Expect = 1.400e-50 Identity = 125/258 (48.45%), Postives = 160/258 (62.02%), Query Frame = 0 Query: 36 GKYLIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAIKSMGP-LNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 G LI GGTGGIG A +L + + +HL+ R + +L LA L G T+G D+ D+ +A GP L GL Y VGSINLKPL T DF F+LN +GAA A++AALP L KA+ SVVLFS++AV QGF HA +S +KGA+EGLTRALAAELAP IRVNA+APSLT TPLA+ LT + M AIA H +PRLG+ +D+ + ++ W+TGQ++GVDGGRS +R Sbjct: 3 GTVLIYGGTGGIGSATARKLRARGYALHLVGRDESKLAALADEL------------GATMTLG----DIDDSTVFARAAAEAGPVLAGLVYAVGSINLKPLARLTATDFERDFRLNAMGAALAVQAALPAL----KASEGTASVVLFSTVAVAQGFTAHASVSMAKGAVEGLTRALAAELAPKIRVNAIAPSLTKTPLAKALTGNEQMATAIAAMHALPRLGEAEDSAALATFLI-SEEAGWMTGQVIGVDGGRSTLR 239
BLAST of NO06G04380 vs. NCBI_GenBank
Match: WP_062631829.1 (KR domain-containing protein [Devosia sp. Leaf64] >KQN69910.1 short-chain dehydrogenase [Devosia sp. Leaf64]) HSP 1 Score: 209.1 bits (531), Expect = 1.800e-50 Identity = 130/255 (50.98%), Postives = 161/255 (63.14%), Query Frame = 0 Query: 39 LIIGGTGGIGRMLANRLVMKYHKVHLISRHQDQLTDLASSLHAPADTNPPTHSGVEGTVGFTDVDVTDTIALEKAI-KSMGPLNGLAYCVGSINLKPLKATTTNDFIEAFKLNTVGAATAIRAALPGLMAQHKATGEAGSVVLFSSIAVQQGFPNHAIISTSKGAIEGLTRALAAELAPAIRVNAVAPSLTDTPLAQVLTRSAPMKEAIAKAHPIPRLGKGDDAXXXXXXXXDNNDSSWVTGQILGVDGGRSVVR 293 +I+GG GGIG LA + + HLI R D L LA GT + DVTDT AL AI ++ GP+ GLAYCVG+INLKPL T DF F ++ GAA AI+AALP L Q++ T S+VLFSS+AV QGF HA IS +KGA+EGLT ALAAE+AP IRVNAVAPSLT TPLA+ LT + M ++IA+ H +PRLG +D+ ++ SSW+TGQILGVDGGRS +R Sbjct: 6 IIVGGAGGIGSALAKKSAARGLVPHLIGRSPDALAALADE--------------TGGT--WAKADVTDTTALTSAIQQAPGPVAGLAYCVGTINLKPLARLTIEDFARDFAISAAGAAMAIQAALPAL-KQYEGT---ASIVLFSSVAVSQGFSGHASISMAKGAVEGLTVALAAEVAPKIRVNAVAPSLTATPLAESLTSNEAMAKSIAQLHSLPRLGTAEDSANAADFLL-SDASSWITGQILGVDGGRSTLR 239 The following BLAST results are available for this feature:
BLAST of NO06G04380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04380 ID=NO06G04380|Name=NO06G04380|organism=Nannochloropsis oceanica|type=gene|length=1648bpback to top protein sequence of NO06G04380.1 >NO06G04380.1-protein ID=NO06G04380.1-protein|Name=NO06G04380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bpback to top Synonyms
Publications
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