NO06G04110, NO06G04110 (gene) Nannochloropsis oceanica

Overview
NameNO06G04110
Unique NameNO06G04110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2780
Alignment locationchr6:1150462..1153241 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1150462..1153241 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G04110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000060NSK000060Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G04110.1NO06G04110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|651819gene_6743Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G04110.1NO06G04110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G04110 ID=NO06G04110|Name=NO06G04110|organism=Nannochloropsis oceanica|type=gene|length=2780bp
AGATGGAGGACGGCCCCCACCCTCCCTTTCACCTTCCTCCAATACCACTT
CCCTCACCGTCCTCCGGCCTTCCTTTCCTCATGAACCACACCTATCCTGT
GCCTGACTTATCTGATATGGTTATGGATGACATTTGGATGATGCAAGATC
AAGAGCAGCGGCAGCATCACCACCATCAGCAGCATGCCCCTAACCCCCCT
CCGAGCCCTGCAGCTGCCATAGGGGAAATTGGGGCTGGCGGTGGTGGCTT
TGACACTTTTATGCTCGACCCCATGACGGGTCATTTTCAAATGCAGCAAC
AGCTTCCGTCCTTGTCCCCGCTACCCTTGCCGTCTCACCACCACAGACAT
ACCCGCAGTCAGCAAGACCTCCACCCTACCCGCCACCACAAGGGCCAGAG
TGACAACGATGACGATGAGGAGGAAGAGGAAGAATTTTACGCCAGTGACA
GCGACTTTGTGATTGATGAGGATGATCTCTCAAGCCTGGATGAAGATCGG
AGCAATCATCAGGTGCGCACTCCCTACCTCCCCCCTTCAATCATGAACGG
CATGGGCTCCCCTGACGGCATGAGCACCCACTCATCCTACCCGGATGGAT
CTGTCCCCCATTGGGCTGCGGGCTATGGAACTGGCGGCGGATCAGGCCGA
AGCCATGGGCGTGGGGGTGCTCGTGGTAATGGCGGGCGTGGGCGACGTAA
GGGCTCCCTGGACGTGCAGCAGATGACGCGACGCTTGAAGCAGAAGGCGG
AGAGCTATGAGCGGAAGAAGAGTAGAGCTAAGGCCTGTCGCAAGGTGCTG
AAGGAGCGGTTCGATACGCTGCTCAAGGTATGCGGTGATCCCCACATTCG
ACGCTCGGACAAGGTCGGACTCTTGACGCGGGCGATTAATCTCATTACGA
CCATGCGGCAGCAGCTGGGCGGCGCTGGAGGAGCCTTTTTCGACGTGCAA
CGGCCCCCAACGGCGTGGCGAGGCGGTGGAAACGGCCACCATTATCATCA
CCACAGTCAGGGCACACGACGTAGCAAGCGCACAATACGGGGCTCGGCGC
TGTCGGCGGCATCGACGAACAACGACGACAACAAAGAACGCGACGACAAC
GATGACGAAAACGGAGAGCGCCAACCGGGGAAGCGAGGATGTGTGAACCG
TGTGCACTCTCGAAAATCTCCGACTCGATGGATTCCTGTCAGTATGATCC
AGCACCAACAAAACTCCGATCCCACGACTCCGTCGCCTCAGACCTTCACC
CCTCCTTCGACGCCGACGACCTCCTTTCCAGCTAACATGCCCTTGAAGGA
ACGCCTGGCCACACCCAAAGTGACGCACACGCTGCTGGCGTGCTTGAATT
CTGCTTTTCTCGAGCCCTGCCGAGATGTGGTACCCGATAAAAAAGAGCCA
ACGGCCTTGCAGGACGTGCCCTGGAAAGAAATATGCCGCATGCGCTGGAA
GGCGGAGGAAGCCGAATTCCACGAGGAGCTACACCCCACGACCACGATTG
ACTGGCGCCACGTGTATGTGCAGCAAGCCCGGGCCTTGCGGCTACCTCAC
TCCCCAAACTTTTTGTCCATAGGCTCAGTAGTTTCGTCGGGGGAATCCGA
GGGCGTCTGCGGCTGGCTGCTGGCGCGCACCTCTTCCTACATCCCTTTGC
CCTCACCTGTGGGCAGCTCGAGTGCGCCGCAGGCCTTGCTCTCCTTTATC
CTGGTGATGCAAAATATCACACACGACATGATCACTATCCCACACCAGCG
TTTTGAGGTGCATATCAAGAGACAGGTCCCGTCGCAGCAGCAGAAGCAGA
AGCAAGGCCCGCGTGTCATTCCCACTCGCTCCATCTCCAACAGTTCCTCC
ACTACCACCTCCTCCATCGGCAGCACCAGCGACGGAGATGGCGAGGGGGA
AGAGCGGAAAGAACAGGCGAATATGCCGGTGATACTACAAGAGCCAACAG
AAATGCAGCTAAAGGAGCGAGGGTTAGACCCCTCCCTGTATCAGGCTTCC
CTCATGTCATGCCAAGAGACGGATTTGAACGCGGACGGCAGCATTCCCTG
GGTGTGCTACGAGGGAGTTGGTGGCTTGCGGCTGGGTCTGTTTGATACGG
CCGTGCTTACTTTTTACGTTTTATTGCGCAGAGACCTTTGCATGCGTTCA
GACACGGGTGCAGAAAATGGGAAAGAGAAGGCAAAGGGGAAAGGGGAGGG
GATGAGTGCCGAGGAGGCGGAGACCTGGACGAAGGAGATGGCGTTCACGG
CATTAGTGCCGTCCAAGGTGCCGGCGGTGGCGGTTTCAGATGTCTGCAAC
AAGGAGGAGAAGGGCGACGATACGACGGAGGGAGGTGGGGTTTTGGATAG
CGATGAGGATGGAGACGGGTTAGGTGAAGAGGTGCGAGTGACGTTAGTGA
CGACGACAAAGACTGAACAAGGGCCCTAAATGGTGGAATGGCCAAATGTC
TCGATAGCAAACAAGAGACTGAAAAAGGGTAGGAGAATGTGATATATCGT
ATTAATGACCCACGCAAACACATTCGCGTAAATGATAGAAAGGGGGGATG
ATGAAGAGCGTGTCGGGAAGAGAAAGAGAAGCTGCGGTGGTAGACGAAGA
TGCACAAATAGATGTTGTGTAATTCACCATTCGTTTGGCTTGTCTATAAA
ATTGGTGATGCGAGTGATACTTTCATGTGATTATGTCTAAATTTTTGGGA
TGAAGAATGATGATGTTGGCAGGGCTGTCAGAATTTAGGCCTACAAAAGG
ATAAAGCACGAGCGAAAGTGACAACGAGAA
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protein sequence of NO06G04110.1

>NO06G04110.1-protein ID=NO06G04110.1-protein|Name=NO06G04110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=809bp
MEDGPHPPFHLPPIPLPSPSSGLPFLMNHTYPVPDLSDMVMDDIWMMQDQ
EQRQHHHHQQHAPNPPPSPAAAIGEIGAGGGGFDTFMLDPMTGHFQMQQQ
LPSLSPLPLPSHHHRHTRSQQDLHPTRHHKGQSDNDDDEEEEEEFYASDS
DFVIDEDDLSSLDEDRSNHQVRTPYLPPSIMNGMGSPDGMSTHSSYPDGS
VPHWAAGYGTGGGSGRSHGRGGARGNGGRGRRKGSLDVQQMTRRLKQKAE
SYERKKSRAKACRKVLKERFDTLLKVCGDPHIRRSDKVGLLTRAINLITT
MRQQLGGAGGAFFDVQRPPTAWRGGGNGHHYHHHSQGTRRSKRTIRGSAL
SAASTNNDDNKERDDNDDENGERQPGKRGCVNRVHSRKSPTRWIPVSMIQ
HQQNSDPTTPSPQTFTPPSTPTTSFPANMPLKERLATPKVTHTLLACLNS
AFLEPCRDVVPDKKEPTALQDVPWKEICRMRWKAEEAEFHEELHPTTTID
WRHVYVQQARALRLPHSPNFLSIGSVVSSGESEGVCGWLLARTSSYIPLP
SPVGSSSAPQALLSFILVMQNITHDMITIPHQRFEVHIKRQVPSQQQKQK
QGPRVIPTRSISNSSSTTTSSIGSTSDGDGEGEERKEQANMPVILQEPTE
MQLKERGLDPSLYQASLMSCQETDLNADGSIPWVCYEGVGGLRLGLFDTA
VLTFYVLLRRDLCMRSDTGAENGKEKAKGKGEGMSAEEAETWTKEMAFTA
LVPSKVPAVAVSDVCNKEEKGDDTTEGGGVLDSDEDGDGLGEEVRVTLVT
TTKTEQGP*
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Synonyms
Publications