NO06G04090, NO06G04090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G04090 vs. NCBI_GenBank
Match: OAE23994.1 (hypothetical protein AXG93_1330s1030 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 368.6 bits (945), Expect = 2.200e-98 Identity = 183/309 (59.22%), Postives = 229/309 (74.11%), Query Frame = 0 Query: 49 RATAMAAGSSLRMQQAAATTGIDVPKISFSKYHGIGNDFILIDNRQSDKPILSAEQCKEICSRHYSIGADGVIFALPGKEGADYSMRIYNSDGSEPEMCGNGIRCMAKFLRQLEGDDRNGESRSYRIYTLAGMVVPVVRGDGLVTVDMGTPILDGAKVPTTLPAGPDGRVVEAPLEVAGKTWGVTTVSMGNPHAVIFVPFLDPV---DLAKVGPQIEVHPVFPKKTNVEFVQVVAPHLLRMKVWERGAGPTLACGTGACALTVAAILAGKTDKREVTVQLPGGDLQIEWRKSDDHVYMTGAAELVYGGT 355 RA AM+ G ++ A+ + + F KYHG+GNDFIL+DNR+S P +S E ++C R++ +GADGVIF LPG G+DY+MRIYNSDGSEPEMCGNGIRCMAKF+ +LEG ESRSY+I TLAG++VP + DG + VDMGTPIL+ K+PTTL DG VV+APL VAG++W VT VSMGNPH V + + V LA++GP E + VFP KTN EFVQV++P LRM+VWERGAGPTLACGTGACAL VAA+L G+ + R+ V+LPGG LQIEWR+SD+HVYMTG AE+ + GT Sbjct: 64 RAQAMSVGVETKI---ASKADVGESSLQFVKYHGLGNDFILVDNRKSSTPCISPEAAAKLCDRNFGVGADGVIFVLPGINGSDYTMRIYNSDGSEPEMCGNGIRCMAKFVAELEGIT---ESRSYKIDTLAGLIVPKLMDDGQICVDMGTPILEAKKIPTTLEPTQDGAVVKAPLVVAGRSWNVTCVSMGNPHCVALLDANEDVYSLPLAEIGPLFEKNEVFPAKTNTEFVQVLSPSHLRMRVWERGAGPTLACGTGACALVVAAVLEGRAE-RDCLVELPGGPLQIEWRESDNHVYMTGPAEIAFRGT 365
BLAST of NO06G04090 vs. NCBI_GenBank
Match: PTQ50168.1 (hypothetical protein MARPO_0001s0200 [Marchantia polymorpha] >PTQ50169.1 hypothetical protein MARPO_0001s0200 [Marchantia polymorpha]) HSP 1 Score: 368.6 bits (945), Expect = 2.200e-98 Identity = 183/309 (59.22%), Postives = 229/309 (74.11%), Query Frame = 0 Query: 49 RATAMAAGSSLRMQQAAATTGIDVPKISFSKYHGIGNDFILIDNRQSDKPILSAEQCKEICSRHYSIGADGVIFALPGKEGADYSMRIYNSDGSEPEMCGNGIRCMAKFLRQLEGDDRNGESRSYRIYTLAGMVVPVVRGDGLVTVDMGTPILDGAKVPTTLPAGPDGRVVEAPLEVAGKTWGVTTVSMGNPHAVIFVPFLDPV---DLAKVGPQIEVHPVFPKKTNVEFVQVVAPHLLRMKVWERGAGPTLACGTGACALTVAAILAGKTDKREVTVQLPGGDLQIEWRKSDDHVYMTGAAELVYGGT 355 RA AM+ G ++ A+ + + F KYHG+GNDFIL+DNR+S P +S E ++C R++ +GADGVIF LPG G+DY+MRIYNSDGSEPEMCGNGIRCMAKF+ +LEG ESRSY+I TLAG++VP + DG + VDMGTPIL+ K+PTTL DG VV+APL VAG++W VT VSMGNPH V + + V LA++GP E + VFP KTN EFVQV++P LRM+VWERGAGPTLACGTGACAL VAA+L G+ + R+ V+LPGG LQIEWR+SD+HVYMTG AE+ + GT Sbjct: 72 RAQAMSVGVETKI---ASKADVGESSLQFVKYHGLGNDFILVDNRKSSTPCISPEAAAKLCDRNFGVGADGVIFVLPGINGSDYTMRIYNSDGSEPEMCGNGIRCMAKFVAELEGIT---ESRSYKIDTLAGLIVPKLMDDGQICVDMGTPILEAKKIPTTLEPTQDGAVVKAPLVVAGRSWNVTCVSMGNPHCVALLDANEDVYSLPLAEIGPLFEKNEVFPAKTNTEFVQVLSPSHLRMRVWERGAGPTLACGTGACALVVAAVLEGRAE-RDCLVELPGGPLQIEWRESDNHVYMTGPAEIAFRGT 373
BLAST of NO06G04090 vs. NCBI_GenBank
Match: CBJ32916.1 (diaminopimelate epimerase [Ectocarpus siliculosus]) HSP 1 Score: 363.6 bits (932), Expect = 7.000e-97 Identity = 175/279 (62.72%), Postives = 210/279 (75.27%), Query Frame = 0 Query: 75 ISFSKYHGIGNDFILIDNRQSDKPILSAEQCKEICSRHYSIGADGVIFALPGKEGADYSMRIYNSDGSEPEMCGNGIRCMAKFLRQLEGDDRNGESRSYRIYTLAGMVVPVVRGDGLVTVDMGTPILDGAKVPTTLPAGPDGRVVEAPLEVAGKTWGVTTVSMGNPHAVIFVPFLDPVDLAKVGPQIEVHPVFPKKTNVEFVQVVAPHLLRMKVWERGAGPTLACGTGACALTVAAILAGKTDKREVTVQLPGGDLQIEWRKSDDHVYMTGAAELVYGG 354 + FSKY G+GNDFIL+DNR+ +P+L+AE+ +C R Y IG DGVIFALPG + DYSMRI NSDGSEPEMCGNGIRCMA+FL LEG + Y+I+TLAG ++P+ R DGLVTVDMG P L+G KVP+TLP DG V++ P++V GK W VT VSMGNPHAV+FVP +D +DL +GPQ E HP FP K N EFVQV+ ++M VWERG G T ACGTGACAL VA++LAG D R+ TV LPGGDLQIEWR+SD VYMTG AEL + G Sbjct: 7 VPFSKYQGLGNDFILVDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSDEMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGK----KKAEYKIHTLAGTIIPMAREDGLVTVDMGPPELNGPKVPSTLPTNDDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLAD-RKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQG 280
BLAST of NO06G04090 vs. NCBI_GenBank
Match: WP_015184189.1 (diaminopimelate epimerase [Microcoleus sp. PCC 7113] >AFZ20053.1 diaminopimelate epimerase [Microcoleus sp. PCC 7113]) HSP 1 Score: 358.2 bits (918), Expect = 2.900e-95 Identity = 168/285 (58.95%), Postives = 214/285 (75.09%), Query Frame = 0 Query: 74 KISFSKYHGIGNDFILIDNRQSDKPILSAEQCKEICSRHYSIGADGVIFALPGKEGADYSMRIYNSDGSEPEMCGNGIRCMAKFLRQLEGDDRNGESRSYRIYTLAGMVVPVVRGDGLVTVDMGTPILDGAKVPTTLPAGPDGRVVEAPLEVAGKTWGVTTVSMGNPHAVIFVPFLDPVDLAKVGPQIEVHPVFPKKTNVEFVQVVAPHLLRMKVWERGAGPTLACGTGACALTVAAILAGKTDKREVTVQLPGGDLQIEWRKSDDHVYMTGAAELVYGGTIGAL 359 +I F+KYHG+GNDFILIDNR +PI+++EQ ++C RH+ IGADGVIFALPG+E DY+MRI+NSDGSEPEMCGNGIRC A+F+ LEG D E YRI+TLAG+++P + G+G V VDMG P L A++PTTL A + + + PL+VAG++W VT VSMGNPH + FV + + L +GPQ E HP FP++TN EF+QVV P L+M+VWERGAG TLACGTGACA VA +L GK+D R+ TV+LPGG L+IEW + D VYMTG AE V+ G + L Sbjct: 2 EIEFTKYHGLGNDFILIDNRADTQPIITSEQAVQLCDRHFGIGADGVIFALPGEEAGDYTMRIFNSDGSEPEMCGNGIRCFAQFIADLEGADAKSE---YRIHTLAGVIIPKIEGEGKVKVDMGMPQLLAAQIPTTL-ADAEQKAIAVPLQVAGQSWEVTCVSMGNPHCITFVEDVAAIPLEAIGPQFEHHPAFPQRTNTEFIQVVRPDYLKMRVWERGAGVTLACGTGACAAVVAGVLTGKSD-RKATVELPGGCLEIEWAQQDQRVYMTGPAERVFRGKVSQL 281
BLAST of NO06G04090 vs. NCBI_GenBank
Match: WP_094672109.1 (diaminopimelate epimerase [Hydrocoleum sp. CS-953] >OZH55146.1 diaminopimelate epimerase [Hydrocoleum sp. CS-953]) HSP 1 Score: 358.2 bits (918), Expect = 2.900e-95 Identity = 171/281 (60.85%), Postives = 218/281 (77.58%), Query Frame = 0 Query: 75 ISFSKYHGIGNDFILIDNRQSDKPILSAEQCKEICSRHYSIGADGVIFALPGKEGADYSMRIYNSDGSEPEMCGNGIRCMAKFLRQLEGDDRNGESRSYRIYTLAGMVVPVVRGDGLVTVDMGTPILDGAKVPTTLPAGPDGRVVEAPLEVAGKTWGVTTVSMGNPHAVIFVPFLDPVDLAKVGPQIEVHPVFPKKTNVEFVQVVAPHLLRMKVWERGAGPTLACGTGACALTVAAILAGKTDKREVTVQLPGGDLQIEWRKSDDHVYMTGAAELVYGGTI 356 IS +KYHG+GNDFILIDNR +PIL+ EQ ++C R++ IGADGVIFALPG+E ADY+MRI+NSDGSEPEMCGNGIRC+AKF+ +LE N + Y IYT AG++VP ++GDG VTVDMG P L +++PTTL + P+ +VV LEVAGK+W VT VSMGNPH + FV + +DLAK+GP+ E HPVFP++TN EF+QV++P ++M+VWERGAG TLACGTGACA VA +L K ++R VTV+LPGG L+IEW +D +YMTG AE V+ G I Sbjct: 3 ISLTKYHGLGNDFILIDNRHQSQPILTPEQAIKLCDRNFGIGADGVIFALPGEEQADYTMRIFNSDGSEPEMCGNGIRCLAKFIAELE----NNKKTKYNIYTGAGLIVPELQGDGQVTVDMGQPRLLASEIPTTL-SNPNEKVVAQSLEVAGKSWSVTCVSMGNPHCITFVEDVSIIDLAKIGPEFEHHPVFPERTNTEFIQVISPKYVKMRVWERGAGATLACGTGACASVVAGVLTQK-NERLVTVELPGGCLEIEWSTTDKKIYMTGPAEKVFTGII 277
BLAST of NO06G04090 vs. NCBI_GenBank
Match: WP_068510310.1 (diaminopimelate epimerase [Leptolyngbya sp. O-77] >BAU42338.1 Diaminopimelate epimerase 2 [Leptolyngbya sp. O-77]) HSP 1 Score: 357.8 bits (917), Expect = 3.800e-95 Identity = 166/280 (59.29%), Postives = 211/280 (75.36%), Query Frame = 0 Query: 75 ISFSKYHGIGNDFILIDNRQSDKPILSAEQCKEICSRHYSIGADGVIFALPGKEGADYSMRIYNSDGSEPEMCGNGIRCMAKFLRQLEGDDRNGESRSYRIYTLAGMVVPVVRGDGLVTVDMGTPILDGAKVPTTLPAGPDGRVVEAPLEVAGKTWGVTTVSMGNPHAVIFVPFLDPVDLAKVGPQIEVHPVFPKKTNVEFVQVVAPHLLRMKVWERGAGPTLACGTGACALTVAAILAGKTDKREVTVQLPGGDLQIEWRKSDDHVYMTGAAELVYGGT 355 I+F+KYHG+GNDFIL+DNRQ +P ++ EQ E C RH+ IGADGVIFALPG++G DY+MRI+NSDGSEPEMCGNGIRC+A+F+ LE + Y+I+TLAG++ P + DG +TVDMG P L ++PTTL A P+ +V+ PLEVAG+TW VT VSMGNPH + FV + + L +GPQ E HP FPK+ N EF+QVV P L+M+VWERGAG TLACGTGACA VAA+L K+D+R TV+LPGG L IEW ++D H+YMTG A+ V+ GT Sbjct: 3 IAFTKYHGLGNDFILVDNRQQPEPRITPEQAVEWCDRHFGIGADGVIFALPGQDGTDYTMRIFNSDGSEPEMCGNGIRCLARFIADLEAAETGSPRPVYKIHTLAGLITPRLEADGQITVDMGQPRLLAGEIPTTL-ATPEEKVINLPLEVAGQTWAVTCVSMGNPHCITFVDDVAAIPLEAIGPQFEHHPAFPKRINTEFIQVVRPDYLKMRVWERGAGITLACGTGACASLVAAVLNAKSDRR-ATVELPGGPLLIEWSETDQHLYMTGPAQKVFSGT 280
BLAST of NO06G04090 vs. NCBI_GenBank
Match: WP_038016163.1 (diaminopimelate epimerase [Synechococcus sp. PCC 7335]) HSP 1 Score: 357.1 bits (915), Expect = 6.600e-95 Identity = 171/282 (60.64%), Postives = 215/282 (76.24%), Query Frame = 0 Query: 75 ISFSKYHGIGNDFILIDNRQSDKPILSAEQCKEICSRHYSIGADGVIFALPGKEGADYSMRIYNSDGSEPEMCGNGIRCMAKFLRQLEGDDRNGE-SRSYRIYTLAGMVVPVVRGDGLVTVDMGTPILDGAKVPTTLPAGPDGRVVEAPLEVAGKTWGVTTVSMGNPHAVIFVPFLDPVDLAKVGPQIEVHPVFPKKTNVEFVQVVAPHLLRMKVWERGAGPTLACGTGACALTVAAILAGKTDKREVTVQLPGGDLQIEWRKSDDHVYMTGAAELVYGGTI 356 + FSKYHG+GNDFIL+DNR S+ P+++ EQ ++C R++ IGADGVIF LPGKEGADYSMRIYNSDGSEPEMCGNGIRC+AKF+ LE + +SY ++TLAG++ P ++ DG VTVDMG PIL ++PTTL PDG+V++ L VAG+ W VT VSMGNPH + FV ++ V LA +GP+ E H FP + N EFV+VV P LRMKVWERGAGPTLACGTG CAL VAA+L GK D R+ TV+LPGG+L+IEW +++ VYMTG A LV+ G + Sbjct: 4 LPFSKYHGLGNDFILMDNRASETPMVTPEQAVDVCDRNFGIGADGVIFVLPGKEGADYSMRIYNSDGSEPEMCGNGIRCLAKFIADLEEEHNEPTLPKSYGVHTLAGIIRPELKPDGQVTVDMGEPILTAREIPTTL-GQPDGKVIDETLTVAGENWQVTCVSMGNPHCITFVDDVEAVPLADIGPRFEHHEAFPARINTEFVEVVRPDFLRMKVWERGAGPTLACGTGTCALVVAAVLNGKCD-RQTTVELPGGNLEIEW-ANNNRVYMTGPATLVFSGDV 282
BLAST of NO06G04090 vs. NCBI_GenBank
Match: WP_073599640.1 (diaminopimelate epimerase [Hydrococcus rivularis] >OKH23007.1 diaminopimelate epimerase [Hydrococcus rivularis NIES-593]) HSP 1 Score: 357.1 bits (915), Expect = 6.600e-95 Identity = 166/280 (59.29%), Postives = 216/280 (77.14%), Query Frame = 0 Query: 75 ISFSKYHGIGNDFILIDNRQSDKPILSAEQCKEICSRHYSIGADGVIFALPGKEGADYSMRIYNSDGSEPEMCGNGIRCMAKFLRQLEGDDRNGESRSYRIYTLAGMVVPVVRGDGLVTVDMGTPILDGAKVPTTLPAGPDGRVVEAPLEVAGKTWGVTTVSMGNPHAVIFVPFLDPVDLAKVGPQIEVHPVFPKKTNVEFVQVVAPHLLRMKVWERGAGPTLACGTGACALTVAAILAGKTDKREVTVQLPGGDLQIEWRKSDDHVYMTGAAELVYGGT 355 I F+KYHG+GNDFIL+DNR +P++S E ++C RH+ IGADGVIFALPG++G DY+MRI+N+DGSEPEMCGNGIRC+A+F+ QLEG + G +SYRI+TLAG++ P + GD V+VDMGTP L A++PTTL P+ +V+E LEV GK+W VT VSMGNPH + FV D + L +GPQ E HPVFP++TN EF+Q++ P L+M+VWERGAG TLACGTGACA VA +L GK+D R TV+LPGG L+I W ++D+ VYMTG A+ V+ G+ Sbjct: 3 IEFTKYHGLGNDFILLDNRHRSEPLISPEIAVQMCDRHFGIGADGVIFALPGQDGTDYAMRIFNADGSEPEMCGNGIRCLARFIAQLEGTETAG--KSYRIHTLAGVITPRLEGDEQVSVDMGTPQLTAAQIPTTL-GKPEEKVIEQSLEVGGKSWLVTCVSMGNPHCITFVENTDAIVLETIGPQFERHPVFPQRTNTEFIQIIRPDYLKMRVWERGAGATLACGTGACASVVAGVLTGKSD-RLCTVELPGGCLKIHWSETDERVYMTGPAKRVFSGS 278
BLAST of NO06G04090 vs. NCBI_GenBank
Match: OUC12268.1 (diaminopimelate epimerase [Alkalinema sp. CACIAM 70d]) HSP 1 Score: 356.7 bits (914), Expect = 8.600e-95 Identity = 173/281 (61.57%), Postives = 212/281 (75.44%), Query Frame = 0 Query: 75 ISFSKYHGIGNDFILIDNRQSDKPILSAEQCKEICSRHYSIGADGVIFALPGKEGADYSMRIYNSDGSEPEMCGNGIRCMAKFLRQLEGDDRNGESRSYRIYTLAGMVVPVVRGDGLVTVDMGTPILDGAKVPTTLPAGPDGRVVEAPLEVAGKTWGVTTVSMGNPHAVIFVPFLDPVDLAKVGPQIEVHPVFPKKTNVEFVQVVAPHLLRMKVWERGAGPTLACGTGACALTVAAILAGKTDKREVTVQLPGGDLQIEWRKSDDHVYMTGAAELVYGGTI 356 + FSKYHG+GNDFIL+DNR S PILS EQ +++C RH+ IGADGVIFALPG+ G DY+MRI+NSDGSEPEMCGNGIRCMA+FL LEGD Y I+TLAG++ P + DG +TVDMG P L ++PTTL A D + V PLEVAG+TW VTTVSMGNPH + FV + +DL KVGPQ E H VFP++TN EF++VV L+M+VWERGAG TLACGTGACA VAA+L K+D R+ T++LPGG LQIEW +DD ++MTG AE V+ G + Sbjct: 3 LQFSKYHGLGNDFILVDNRHSSDPILSPEQAEKLCDRHFGIGADGVIFALPGQNGTDYTMRIFNSDGSEPEMCGNGIRCMARFLADLEGD---AAKSVYTIHTLAGLITPKLEADGQITVDMGKPRLLAGEIPTTLVAA-DAQAVAVPLEVAGQTWAVTTVSMGNPHCITFVEDVAAIDLEKVGPQFEHHSVFPQRTNTEFIEVVDRGYLKMRVWERGAGITLACGTGACASLVAAVLNYKSD-RKATIELPGGPLQIEW-AADDRIFMTGPAERVFVGEV 277
BLAST of NO06G04090 vs. NCBI_GenBank
Match: WP_009768787.1 (diaminopimelate epimerase [Oscillatoriales cyanobacterium JSC-12] >EKQ67291.1 diaminopimelate epimerase [Oscillatoriales cyanobacterium JSC-12]) HSP 1 Score: 355.5 bits (911), Expect = 1.900e-94 Identity = 170/282 (60.28%), Postives = 211/282 (74.82%), Query Frame = 0 Query: 74 KISFSKYHGIGNDFILIDNRQSDKPILSAEQCKEICSRHYSIGADGVIFALPGKEGADYSMRIYNSDGSEPEMCGNGIRCMAKFLRQLEGDDRNGESRSYRIYTLAGMVVPVVRGDGLVTVDMGTPILDGAKVPTTLPAGPDGRVVEAPLEVAGKTWGVTTVSMGNPHAVIFVPFLDPVDLAKVGPQIEVHPVFPKKTNVEFVQVVAPHLLRMKVWERGAGPTLACGTGACALTVAAILAGKTDKREVTVQLPGGDLQIEWRKSDDHVYMTGAAELVYGGTI 356 +I F+KYHG+GNDFIL+DNR S +P L+ EQ ++C RH+ IGADGVIF LPG+ GADY+MRI+NSDGSEPEMCGNGIRC A+F+ +LE + RSY IYTL+GM+ P + G+VTVDMG P L A++PTTL A PD +V+ PLEV KTW VT VSMGNPH + FV + + L VGP+ E HP FPKK N EF+QVV L+M+VWERGAG TLACGTGACA VAA+L G +D+R T++LPGG LQIEW S++H+YMTG AE V+ G + Sbjct: 2 EIGFTKYHGLGNDFILVDNRASSEPKLTPEQSVKLCDRHFGIGADGVIFVLPGQNGADYTMRIFNSDGSEPEMCGNGIRCFARFVAELENVT---QPRSYNIYTLSGMITPQLESTGMVTVDMGEPRLLAAEIPTTLGA-PDSKVINHPLEVDNKTWEVTCVSMGNPHCITFVEDVSQIPLETVGPKFETHPSFPKKINAEFIQVVRSDYLKMRVWERGAGITLACGTGACASLVAAVLTGHSDRR-TTIELPGGCLQIEWADSNNHLYMTGPAEKVFQGHV 278 The following BLAST results are available for this feature:
BLAST of NO06G04090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04090 ID=NO06G04090|Name=NO06G04090|organism=Nannochloropsis oceanica|type=gene|length=4496bpback to top protein sequence of NO06G04090.1 >NO06G04090.1-protein ID=NO06G04090.1-protein|Name=NO06G04090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=361bpback to top Synonyms
Publications
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