NO06G04000, NO06G04000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO06G04000 vs. NCBI_GenBank
Match: XP_002553128.1 (KLTH0D09614p [Lachancea thermotolerans CBS 6340] >CAR22690.1 KLTH0D09614p [Lachancea thermotolerans CBS 6340]) HSP 1 Score: 213.8 bits (543), Expect = 1.000e-51 Identity = 92/148 (62.16%), Postives = 118/148 (79.73%), Query Frame = 0 Query: 217 STCAGRKKALFVGITYRGTRAELRGCVNDVKNLHSFIKRFYGFQNEEMRVLTDDSSFSEGSPTRHNILSGMRWLVAGAQPGDSLFFHFSGHGGSVRDLNGDEADGMDETILPIDHDRAGQIIDDEIHDVMVRPLQKGVRLTAIFDSCH 365 S C G++KAL +GI Y GT++ELRGC+NDV+N+H F+ YG+++E++ VLTDD + G P R NIL M+WLV+ AQP DSLFFH+SGHGG +DL+GDE DGMD+ I P+DH+ G IIDDEIHD+MV+PLQ GVRLTA+FDSCH Sbjct: 133 SQCTGKRKALLIGINYFGTQSELRGCINDVRNIHDFLTTRYGYKSEDIVVLTDDQTQMAGVPLRQNILRAMQWLVSNAQPNDSLFFHYSGHGGQTKDLDGDEEDGMDDVIYPVDHETQGHIIDDEIHDIMVKPLQPGVRLTALFDSCH 280
BLAST of NO06G04000 vs. NCBI_GenBank
Match: CUS20470.1 (LAQU0S01e07316g1_1 [Lachancea quebecensis]) HSP 1 Score: 212.2 bits (539), Expect = 2.900e-51 Identity = 91/148 (61.49%), Postives = 117/148 (79.05%), Query Frame = 0 Query: 217 STCAGRKKALFVGITYRGTRAELRGCVNDVKNLHSFIKRFYGFQNEEMRVLTDDSSFSEGSPTRHNILSGMRWLVAGAQPGDSLFFHFSGHGGSVRDLNGDEADGMDETILPIDHDRAGQIIDDEIHDVMVRPLQKGVRLTAIFDSCH 365 S C G++KAL +GI Y GT++ELRGC+NDV+N+H F+ YG+++E++ VLTDD + G P R NIL M+WLV+ QP DSLFFH+SGHGG +DL+GDE DGMD+ I P+DH+ G IIDDEIHD+MV+PLQ GVRLTA+FDSCH Sbjct: 133 SQCTGKRKALLIGINYFGTQSELRGCINDVRNIHDFLTSRYGYKSEDIVVLTDDQTQMAGVPLRQNILRAMQWLVSNTQPNDSLFFHYSGHGGQTKDLDGDEEDGMDDVIYPVDHESQGHIIDDEIHDIMVKPLQPGVRLTALFDSCH 280
BLAST of NO06G04000 vs. NCBI_GenBank
Match: KLU90937.1 (metacaspase-1 [Magnaporthiopsis poae ATCC 64411]) HSP 1 Score: 208.8 bits (530), Expect = 3.200e-50 Identity = 90/153 (58.82%), Postives = 117/153 (76.47%), Query Frame = 0 Query: 217 STCAGRKKALFVGITYRGTRAELRGCVNDVKNLHSFIKRFYGFQNEEMRVLTDDSSFSEGSPTRHNILSGMRWLVAGAQPGDSLFFHFSGHGGSVRDLNGDEADGMDETILPIDHDRAGQIIDDEIHDVMVRPLQKGVRLTAIFDSCHRYVSL 370 S C G++KAL +GI Y G + ELRGC+NDV+NL +F+ FYG++ E+M LTDDS+ + PT+ N++ M WLVAGAQP DSLFFH+SGHG DL+GDE DG DETILP+D++ AG I+DD++HD+MV+PL G RLTAIFDSCH +L Sbjct: 114 SQCTGKRKALLIGINYFGQKGELRGCINDVRNLSNFLMEFYGYRQEDMVQLTDDSTNPQSMPTKENMIRAMHWLVAGAQPNDSLFFHYSGHGSQTEDLDGDEDDGYDETILPVDYEHAGMIVDDDMHDIMVKPLPPGCRLTAIFDSCHSGTAL 266
BLAST of NO06G04000 vs. NCBI_GenBank
Match: ORX88438.1 (hypothetical protein K493DRAFT_341283 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 208.8 bits (530), Expect = 3.200e-50 Identity = 96/151 (63.58%), Postives = 114/151 (75.50%), Query Frame = 0 Query: 214 PFTSTCAGRKKALFVGITYRGTRAELRGCVNDVKNLHSFIKRFYGFQNEEMRVLTDDSSFSEGSPTRHNILSGMRWLVAGAQPGDSLFFHFSGHGGSVRDLNGDEADGMDETILPIDHDRAGQIIDDEIHDVMVRPLQKGVRLTAIFDSCH 365 P S C+GR+KAL +GI Y GT AELRGC+NDV N+ F+ + YGF+ E+M VLTDD PTR NI SGM WLV GAQP DS F HFSGHGG +DL+GDE DG DETILP+D+ RAGQI+DDEI+ ++VR L GVRLTA+FDSCH Sbjct: 186 PMVSQCSGRRKALLIGINYFGTSAELRGCINDVNNIKKFLMQQYGFRTEDMVVLTDDQKDPRFQPTRANITSGMYWLVNGAQPNDSYFLHFSGHGGQTQDLDGDELDGTDETILPVDYKRAGQIVDDEINAILVRRLPPGVRLTAVFDSCH 336
BLAST of NO06G04000 vs. NCBI_GenBank
Match: XP_009218517.1 (metacaspase-1 [Gaeumannomyces tritici R3-111a-1] >EJT82508.1 metacaspase-1 [Gaeumannomyces tritici R3-111a-1]) HSP 1 Score: 208.0 bits (528), Expect = 5.500e-50 Identity = 90/153 (58.82%), Postives = 119/153 (77.78%), Query Frame = 0 Query: 217 STCAGRKKALFVGITYRGTRAELRGCVNDVKNLHSFIKRFYGFQNEEMRVLTDDSSFSEGSPTRHNILSGMRWLVAGAQPGDSLFFHFSGHGGSVRDLNGDEADGMDETILPIDHDRAGQIIDDEIHDVMVRPLQKGVRLTAIFDSCHRYVSL 370 S C G++KAL +GI Y G + ELRGC+NDV+NL +F++ FYG++ E+M LTDDS+ + PTR N+L M WLVAGAQP DSLFFH+SGHG +DL+GDE DG DETI+P+D+++AG I+DDE+H++MV+ L G RLTAIFDSCH +L Sbjct: 117 SQCTGKRKALLIGINYFGQKGELRGCINDVRNLSNFLQEFYGYRQEDMVQLTDDSTNPQSMPTRENMLRAMHWLVAGAQPNDSLFFHYSGHGSQAKDLDGDEDDGFDETIIPMDYEQAGHIVDDEMHEIMVKSLPAGCRLTAIFDSCHSGTAL 269
BLAST of NO06G04000 vs. NCBI_GenBank
Match: EXF86563.1 (caspase domain-containing protein [Colletotrichum fioriniae PJ7]) HSP 1 Score: 208.0 bits (528), Expect = 5.500e-50 Identity = 93/148 (62.84%), Postives = 113/148 (76.35%), Query Frame = 0 Query: 217 STCAGRKKALFVGITYRGTRAELRGCVNDVKNLHSFIKRFYGFQNEEMRVLTDDSSFSEGSPTRHNILSGMRWLVAGAQPGDSLFFHFSGHGGSVRDLNGDEADGMDETILPIDHDRAGQIIDDEIHDVMVRPLQKGVRLTAIFDSCH 365 STC G++KAL +GI Y G ELRGC+NDVKNL +F+ YG++ E+M +LTDD + G PT++NIL M WLV GAQP DSLFFH+SGHGG DL+GDE DG DE I P+D+ AG I+DDE+H +MVRPLQ GVRLTAIFDSCH Sbjct: 165 STCQGKRKALLIGINYFGQDGELRGCINDVKNLSAFLVEKYGYKREDMVILTDDQQQAMGQPTKNNILRAMHWLVQGAQPNDSLFFHYSGHGGQTEDLDGDEDDGYDEVIYPVDYKEAGHIVDDEMHLIMVRPLQPGVRLTAIFDSCH 312
BLAST of NO06G04000 vs. NCBI_GenBank
Match: KXH48546.1 (caspase domain-containing protein [Colletotrichum simmondsii]) HSP 1 Score: 208.0 bits (528), Expect = 5.500e-50 Identity = 93/148 (62.84%), Postives = 113/148 (76.35%), Query Frame = 0 Query: 217 STCAGRKKALFVGITYRGTRAELRGCVNDVKNLHSFIKRFYGFQNEEMRVLTDDSSFSEGSPTRHNILSGMRWLVAGAQPGDSLFFHFSGHGGSVRDLNGDEADGMDETILPIDHDRAGQIIDDEIHDVMVRPLQKGVRLTAIFDSCH 365 STC G++KAL +GI Y G ELRGC+NDVKNL +F+ YG++ E+M +LTDD + G PT++NIL M WLV GAQP DSLFFH+SGHGG DL+GDE DG DE I P+D+ AG I+DDE+H +MVRPLQ GVRLTAIFDSCH Sbjct: 166 STCQGKRKALLIGINYFGQDGELRGCINDVKNLSAFLVEKYGYKREDMVILTDDQQQAMGQPTKNNILRAMHWLVQGAQPNDSLFFHYSGHGGQTEDLDGDEDDGYDEVIYPVDYKEAGHIVDDEMHLIMVRPLQPGVRLTAIFDSCH 313
BLAST of NO06G04000 vs. NCBI_GenBank
Match: KXH59865.1 (caspase domain-containing protein [Colletotrichum nymphaeae SA-01]) HSP 1 Score: 208.0 bits (528), Expect = 5.500e-50 Identity = 93/148 (62.84%), Postives = 113/148 (76.35%), Query Frame = 0 Query: 217 STCAGRKKALFVGITYRGTRAELRGCVNDVKNLHSFIKRFYGFQNEEMRVLTDDSSFSEGSPTRHNILSGMRWLVAGAQPGDSLFFHFSGHGGSVRDLNGDEADGMDETILPIDHDRAGQIIDDEIHDVMVRPLQKGVRLTAIFDSCH 365 STC G++KAL +GI Y G ELRGC+NDVKNL +F+ YG++ E+M +LTDD + G PT++NIL M WLV GAQP DSLFFH+SGHGG DL+GDE DG DE I P+D+ AG I+DDE+H +MVRPLQ GVRLTAIFDSCH Sbjct: 169 STCQGKRKALLIGINYFGQDGELRGCINDVKNLSAFLVEKYGYKREDMVILTDDQQQAMGQPTKNNILRAMHWLVQGAQPNDSLFFHYSGHGGQTEDLDGDEDDGYDEVIYPVDYKEAGHIVDDEMHLIMVRPLQPGVRLTAIFDSCH 316
BLAST of NO06G04000 vs. NCBI_GenBank
Match: OLN82028.1 (Metacaspase-1 [Colletotrichum chlorophyti]) HSP 1 Score: 207.6 bits (527), Expect = 7.200e-50 Identity = 94/148 (63.51%), Postives = 111/148 (75.00%), Query Frame = 0 Query: 217 STCAGRKKALFVGITYRGTRAELRGCVNDVKNLHSFIKRFYGFQNEEMRVLTDDSSFSEGSPTRHNILSGMRWLVAGAQPGDSLFFHFSGHGGSVRDLNGDEADGMDETILPIDHDRAGQIIDDEIHDVMVRPLQKGVRLTAIFDSCH 365 STC G++KAL +GI Y G ELRGC+NDVKNL +F+ YG++ E+M VLTDD G PTR+NIL M WLV GAQP DSLFFH+SGHGG DL+GDE DG DE I P+D AG I+DD++H +MVRPLQ GVRLTAIFDSCH Sbjct: 146 STCQGKRKALLIGINYFGQDGELRGCINDVKNLSAFLVERYGYKREDMVVLTDDQQQPMGQPTRNNILRAMHWLVQGAQPNDSLFFHYSGHGGQTEDLDGDEDDGYDEVIYPVDFKEAGHIVDDDMHHIMVRPLQPGVRLTAIFDSCH 293
BLAST of NO06G04000 vs. NCBI_GenBank
Match: ORX46047.1 (peptidase C14 [Hesseltinella vesiculosa]) HSP 1 Score: 206.8 bits (525), Expect = 1.200e-49 Identity = 94/157 (59.87%), Postives = 117/157 (74.52%), Query Frame = 0 Query: 217 STCAGRKKALFVGITYRGTRAELRGCVNDVKNLHSFIKRFYGFQNEEMRVLTDDSSFSEGSPTRHNILSGMRWLVAGAQPGDSLFFHFSGHGGSVRDLNGDEADGMDETILPIDHDR----AGQIIDDEIHDVMVRPLQKGVRLTAIFDSCHRYVSL 370 S C GRK+AL +GI Y G+R ELRGC+NDV N+ +F+ Y F+ E+M +LTDD PTR N++SGM WLVA AQP DS FFH+SGHGGSVRD++GDE DG DET+ P+DHDR GQI+DDE++ +MVRPL +G RLTAIFDSCH +L Sbjct: 18 SNCQGRKRALLIGINYFGSRNELRGCINDVHNVKNFLMTLYNFREEDMVILTDDQKDPRFIPTRQNMISGMHWLVANAQPNDSFFFHYSGHGGSVRDVDGDEDDGQDETVFPVDHDRYPGETGQIVDDEMNAIMVRPLPRGCRLTAIFDSCHSGTAL 174 The following BLAST results are available for this feature:
BLAST of NO06G04000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04000 ID=NO06G04000|Name=NO06G04000|organism=Nannochloropsis oceanica|type=gene|length=2671bpback to top protein sequence of NO06G04000.2 >NO06G04000.2-protein ID=NO06G04000.2-protein|Name=NO06G04000.2|organism=Nannochloropsis oceanica|type=polypeptide|length=406bpback to top protein sequence of NO06G04000.1 >NO06G04000.1-protein ID=NO06G04000.1-protein|Name=NO06G04000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=523bpback to top Synonyms
Publications
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