NO06G03980, NO06G03980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03980 vs. NCBI_GenBank
Match: EWM26394.1 (Beta-lactamase/transpeptidase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 261.5 bits (667), Expect = 3.700e-66 Identity = 190/548 (34.67%), Postives = 226/548 (41.24%), Query Frame = 0 Query: 1 MLRGTD----------PPPA--PSPPLSQRTC-QIIADAFNSIIRGNKGYGGGVLRIDSLTRGLLYEGAWGKKQREYWH--------------------------------------------------------PPSYY------SSSSPPSFAPLHSLGLDTILADAFASPSFLPSLLAPPHWHNATLRQLLSHTSGIADYWSEPSFIQAFIDSPQRLWTPIEIL-TYARQQPPLPP--APLASACLF----------------------PYHYSDTNYVLLGLLIEDWESKALHEVMNEILWQPSGMTDTYFPYLQPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE------------------------------------------------------------------------------------------AMVLETHLTGEEGLRYGLGLFVMELVEGEDGVGGRVWGHDGWGHAFMYVYEPPVMKEGEGEEGELLVMAGTVNQQDMRADPWDAIMVALRAVVKDG 359 MLRGT+ PP + P PP+ C I AFN II NKG+GGG+LRI+SL RGLL+EG+WGK Q PPS SSSS P + SLGLDT LADA PSFL SL APPHW +ATLR LLSHTSGIADYW++PSF+ AF ++ R W EIL YA + PPLP +P C F YSDTNYVL+G LIE W + LH VMNE L+ P G+ DTYFPYLQ S E M+ E+ LTG G+ LGLFVM+L E EDGV GR+WGHDGWGH+FM+VYEPP + + E ++L++ GTVNQQD RADPW AIM LR ++K G Sbjct: 1 MLRGTEAAAALAGESLPPNSSLPVPPVVAHKCSNTIRGAFNDIILKNKGFGGGILRIESLARGLLWEGSWGKVQHSSKEEDMTPSTRFEIASITKTFVASTLMLLLARHSLSDFRTNSNLDFSANFSTSCTIPCLPPSSCGPLPSPSSSSAPYYKIRLSLGLDTTLADAAPFPSFLSSLCAPPHWRSATLRSLLSHTSGIADYWTDPSFLIAFSENSHRTWNADEILKDYAAKMPPLPTSFSPSPKRCSFTSXXXXXXXXXXXXXXXXXXXXXXAYSDTNYVLIGQLIEAWTGQKLHTVMNETLFLPLGLADTYFPYLQSSPSFSPFRARGAGKNARGKSGGGSSTKRRPGNERIDKEAKKERLPKKDEREAPSPSEGGNEVGKKNGARLPTAGPILSHRYESEEDLVNVPRQSADWAGGGLVSSAQDLTLFARKGLLGSRSGGREGVSLADIMMAESVLTGMNGVWSSLGLFVMDLEEEEDGVDGRIWGHDGWGHSFMFVYEPP-QSDQQHAESDILILTGTVNQQDERADPWQAIMEGLRCMLKAG 547
BLAST of NO06G03980 vs. NCBI_GenBank
Match: WP_108057446.1 (hypothetical protein [Spartobacteria bacterium LR76] >PTX98701.1 hypothetical protein DB345_03005 [Spartobacteria bacterium LR76]) HSP 1 Score: 122.1 bits (305), Expect = 3.500e-24 Identity = 105/356 (29.49%), Postives = 155/356 (43.54%), Query Frame = 0 Query: 16 SQRTCQIIADAFNSIIRGNKGYGGGVLRIDSLTRGLLYEGAWGKKQREYWHPPSYYSSSSPP----SFAPLHSLGLDTILAD----AFASP--SFLPSLLAPPHWHNATLRQLLSHTSGIADYWSE--------PSFIQAFIDSPQRLWTPIEILTYARQQPPLPPAPLASACLFPYHYSDTNYVLLGLLIEDWESKALHEVMNEILWQPSGMTDTYFPYLQP-----------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMVLETHL----TGEEGLRYGLGLFVMELVEGEDGVGGRVWGHDGWGHAFMYVYEPPVMKEGEGEEGELLVMAGTVNQQD 339 +Q Q + + ++ N G+GGG++RI T G L +GA GK + P S + P S + +LA+ + +P LP+ + T+RQLLSHTSG+ YW++ +F+++F+ P WTP EIL+YAR+ P P +HYSDTN+VLLGLLIE + LH V + +++P GM T+ Y +P + L+ L TGE+ + YGLGL+ ++L DG G VWGHDG G++F Y Y P + G + GT+NQ D Sbjct: 24 AQTASQAVLTELDQLVADNDGHGGGIVRIADRT-GTLCQGAAGK----FAGPASPDMTPDTPFEIASITKAVTAATILVLAEEGKLSLDTPIGKVLPAKAVQGFDASLTIRQLLSHTSGLLHYWTDGARDREGNNAFLRSFLADPGHNWTPDEILSYAREIPSRRPG--------RFHYSDTNFVLLGLLIEHVTGQPLHTVYRQKIFRPLGMDSTWLTYHEPRRGAPQSHRYEGGEDLTDVPRQSADWAGGGLVSTARDLERFLRGLADGKLFHDPATLQAMLTFVPTGEQDISYGLGLYRVKL----DGGLGEVWGHDGHGNSFAY-YWP--------QRG--VTFTGTLNQVD 351
BLAST of NO06G03980 vs. NCBI_GenBank
Match: WP_075080154.1 (hypothetical protein [Terrimicrobium sacchariphilum] >GAT34534.1 CubicO group peptidase, beta-lactamase class C family [Terrimicrobium sacchariphilum]) HSP 1 Score: 116.3 bits (290), Expect = 1.900e-22 Identity = 104/362 (28.73%), Postives = 155/362 (42.82%), Query Frame = 0 Query: 10 APSPPLSQRTCQIIADAFNSIIRGNKGYGGGVLRIDSLTRGLLYEGAWGKKQREYWHPPSYYSSSSPP----SFAPLHSLGLDTILAD----AFASP--SFLPSLLAPPHWHNATLRQLLSHTSGIADYWSE--------PSFIQAFIDSPQRLWTPIEILTYARQQPPLPPAPLASACLFPYHYSDTNYVLLGLLIEDWESKALHEVMNEILWQPSGMTDTYFPYLQP-----------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMVLETHL----TGEEGLRYGLGLFVMELVEGEDGVGGRVWGHDGWGHAFMYVYEPPVMKEGEGEEGELLVMAGTVNQQD 339 A S +Q Q + + ++ N+ GGG++RI G+L +GA GK + P S + P S + +LA+ +P LP+ + T+RQLLSHTSG+ YW++ +F+++F+ P WTP EIL+YAR+ P P +HYSDTN+VLLGL+IE + LH V + +++P GM T+ Y +P + L+ L TGE+ + YGLGL+ ++L DG G VWGHDG G++F Y Y P + G + GT+NQ D Sbjct: 19 ATSTGSAQTASQAVLTELDQLVADNQDKGGGIVRIAG-RDGVLCQGAAGK----FAGPDSPDMTPDTPFEIASITKAVTAATILVLAEEGKLTLDTPIGKVLPAKTVQGFDSSLTIRQLLSHTSGLLHYWTDGARDREGNNAFLRSFLADPGHNWTPDEILSYAREIPSRRPG--------RFHYSDTNFVLLGLIIEHVTGQPLHAVYRQKIFRPLGMDSTWLTYHEPRRGAPQSHRYEGSEDLTDVPRQSADWAGGGLVSTARDLERFLRGLADGKLFHDPATLQAMLTFVPTGEQDISYGLGLYRVKL----DGGLGEVWGHDGHGNSFAY-YWP--------QRG--VTFTGTLNQVD 352
BLAST of NO06G03980 vs. NCBI_GenBank
Match: CEM15538.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 107.8 bits (268), Expect = 6.900e-20 Identity = 70/205 (34.15%), Postives = 102/205 (49.76%), Query Frame = 0 Query: 31 IRGNKGYGGGVLRIDSLTRGLLYEGAWGKKQREYWHPPSYYSSSSPPSFAPLHS---------------LGLDTILADAFASPSFLPSLLAPPHWHNATLRQLLSHTSGIADYWSEPSFIQAFIDSPQRLWTPIEILTYARQQPPLPPAPLASACLFPYHYSDTNYVLLGLLIEDWESKALHEVMNEILWQPSGMTDTYFPYLQP 221 + N+GYG G++RI++L LL+EG+ G + S+S P A LGLD +AD + + L T+R LL+HTS + +YW+ FI+ F R W+P+E+L YA P A ++Y+DTNYVLLGLLIE E++ L +V+ E L+ P GMT T+ Y +P Sbjct: 12 VGANRGYGPGLMRIETLDGRLLFEGSHGTLAQRADQCTEPLSASQPFEIASTSKMMTAACVLLLAEGGRLGLDDRVADHLSEDA-----LGGLDVERVTVRMLLNHTSKLPEYWASKQFIRVFEADEHREWSPLEVLPYAAALP---------AKTKRFYYADTNYVLLGLLIEKIENRPLEQVLRERLFVPLGMTHTWTAYREP 202
BLAST of NO06G03980 vs. NCBI_GenBank
Match: OJU98088.1 (hypothetical protein BGO12_06720, partial [Verrucomicrobia bacterium 61-8]) HSP 1 Score: 107.8 bits (268), Expect = 6.900e-20 Identity = 81/248 (32.66%), Postives = 113/248 (45.56%), Query Frame = 0 Query: 114 TLRQLLSHTSGIADYWSE--------PSFIQAFIDSPQRLWTPIEILTYARQQPPLPPAPLASACLFPYHYSDTNYVLLGLLIEDWESKALHEVMNEILWQPSGMTDTYFPYLQ-----PSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMV------LETHL----TGEEGLRYGLGLFVMELVEGEDGVGGRVWGHDGWGHAFMYVYEPPVMKEGEGEEGELLVMAGTVNQQD 339 T+RQLLSHTSG+ YW++ +F+++F+ P WTP EIL+YAR+ P P +HYSDTN+VLLGLLIE + LH V E +++P GM T+ Y + P + + L+ L TGE+ + YGLGL+ ++L DG G VWGHDG G++F Y Y P + G + GT+NQ D Sbjct: 59 TIRQLLSHTSGLLHYWTDGARDREGNNAFLRSFLADPGHNWTPDEILSYAREIPSRRPG--------RFHYSDTNFVLLGLLIEHVTGQPLHTVYREKIFRPLGMDSTWLTYHESRRGAPQSHRYEGSEDLTDVPRQSADWAGGGLVSTARDLERFLRGLADGKLFRNPETLQAMLTFVPTGEQDISYGLGLYRVKL----DGGLGEVWGHDGHGNSFAY-YWP--------QRG--VTFTGTLNQVD 283
BLAST of NO06G03980 vs. NCBI_GenBank
Match: WP_020731239.1 (serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium marinum] >EPQ72347.1 Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium marinum str. Europe] >BBC63180.1 D-Ala-D-Ala carboxypeptidase [Mycobacterium marinum]) HSP 1 Score: 94.4 bits (233), Expect = 7.900e-16 Identity = 51/113 (45.13%), Postives = 68/113 (60.18%), Query Frame = 0 Query: 108 PHWHNATLRQLLSHTSGIADYWSEPSFIQAFIDSPQRLWTPIEILTYARQQPP--LPPAPLASACLFPYHYSDTNYVLLGLLIEDWESKALHEVMNEILWQPSGMTDTYFPYL 219 P+ N T+ QLL+ SG+ +Y P +A + PQR+WTP E+LT A Q PP LP A YHYS+TNYVLLGL+ E + K L E+ E ++ P+G+T T FP L Sbjct: 163 PNGDNITIEQLLNMRSGLYNYSETPEVNEALDNDPQRVWTPDELLTIAYQNPPYFLPGA--------GYHYSNTNYVLLGLIAEQLDRKPLAEIYQERIFAPAGLTSTVFPEL 267
BLAST of NO06G03980 vs. NCBI_GenBank
Match: WP_036457120.1 (D-Ala-D-Ala carboxypeptidase [Mycobacterium marinum]) HSP 1 Score: 94.4 bits (233), Expect = 7.900e-16 Identity = 51/113 (45.13%), Postives = 68/113 (60.18%), Query Frame = 0 Query: 108 PHWHNATLRQLLSHTSGIADYWSEPSFIQAFIDSPQRLWTPIEILTYARQQPP--LPPAPLASACLFPYHYSDTNYVLLGLLIEDWESKALHEVMNEILWQPSGMTDTYFPYL 219 P+ N T+ QLL+ SG+ +Y P +A + PQR+WTP E+LT A Q PP LP A YHYS+TNYVLLGL+ E + K L E+ E ++ P+G+T T FP L Sbjct: 136 PNGDNITIEQLLNMRSGLYNYSETPEVNEALDNDPQRVWTPDELLTIAYQNPPYFLPGA--------GYHYSNTNYVLLGLIAEQLDRKPLAEIYQERIFAPAGLTSTVFPEL 240
BLAST of NO06G03980 vs. NCBI_GenBank
Match: KYK33066.1 (hypothetical protein AYK18_05270 [Theionarchaea archaeon DG-70]) HSP 1 Score: 92.0 bits (227), Expect = 3.900e-15 Identity = 51/126 (40.48%), Postives = 70/126 (55.56%), Query Frame = 0 Query: 100 FLP-SLLAPPHWHN-------ATLRQLLSHTSGIADYWSEPSFIQAFIDSPQRLWTPIEILTYARQQPPLPPAPLASACLFPYHYSDTNYVLLGLLIEDWESKALHEVMNEILWQPSGMTDTYFPY 218 +LP SL++ H +N +RQLL+HTSG+ D WS+ +FIQ + +LW P E + Y + P AP +HYSD NY L GL+I++ K LHEV E+L P GM TY P+ Sbjct: 92 YLPESLMSGLHEYNNQSYGDTLAIRQLLNHTSGLGDNWSDINFIQLILTDTDKLWEPEETIAYVKMHCPPQFAPAQG-----FHYSDINYNLAGLIIQEITGKKLHEVYREMLLDPLGMNHTYRPF 212
BLAST of NO06G03980 vs. NCBI_GenBank
Match: PKN99607.1 (hypothetical protein CVU43_15060 [Chloroflexi bacterium HGW-Chloroflexi-5]) HSP 1 Score: 90.1 bits (222), Expect = 1.500e-14 Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 0 Query: 114 TLRQLLSHTSGIADYWS--EPSFIQAFIDSPQRLWTPIEILTYARQQPPLPPAPLASACLFPYHYSDTNYVLLGLLIEDWESKALHEVMNEILWQPSGMTDTYFPY 218 T++QLLSHTSG+ADY++ + ++A +P + +TP E++ Y R+Q AP YHYSDT Y+LLGL+IE K HE ++E+++ P M DTY + Sbjct: 140 TIQQLLSHTSGVADYFAIEDNGLMEALYQTPDKFFTPQELVKYTREQQSAHFAPGGG-----YHYSDTGYILLGLIIESVSEKPFHENLHEVIFDPLDMNDTYLMF 240
BLAST of NO06G03980 vs. NCBI_GenBank
Match: GAB92121.1 (peptidase S12 family protein [Gordonia rhizosphera NBRC 16068]) HSP 1 Score: 89.7 bits (221), Expect = 1.900e-14 Identity = 48/112 (42.86%), Postives = 66/112 (58.93%), Query Frame = 0 Query: 108 PHWHNATLRQLLSHTSGIADYWSEPSFIQAFIDSPQRLWTPIEILTYA-RQQPPLPPAPLASACLFPYHYSDTNYVLLGLLIEDWESKALHEVMNEILWQPSGMTDTYFPYL 219 P+ N T+ QLL+ SG+ +Y P +A + PQR+WTP E+L A QP PP YHYS+TNYVLLGL+ E + K L EV + +++P+G+T T FP L Sbjct: 135 PNGDNITIEQLLNMRSGLYNYSETPQVNEALDNDPQRVWTPDELLAIAFENQPYFPPGE-------GYHYSNTNYVLLGLIAEKLDDKPLAEVYQDRIFKPAGLTSTVFPEL 239 The following BLAST results are available for this feature:
BLAST of NO06G03980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03980 ID=NO06G03980|Name=NO06G03980|organism=Nannochloropsis oceanica|type=gene|length=2138bpback to top protein sequence of NO06G03980.1 >NO06G03980.1-protein ID=NO06G03980.1-protein|Name=NO06G03980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=360bpback to top Synonyms
Publications
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