NO06G03960, NO06G03960 (gene) Nannochloropsis oceanica

Overview
NameNO06G03960
Unique NameNO06G03960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1893
Alignment locationchr6:1109708..1111600 +

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Properties
Property NameValue
DescriptionInositol monophosphatase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1109708..1111600 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0046854phosphatidylinositol phosphorylation
GO:0009987cellular process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR000760Inositol_monophosphatase
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO06G03960 vs. NCBI_GenBank
Match: EWM26390.1 (inositol monophosphatase [Nannochloropsis gaditana])

HSP 1 Score: 399.8 bits (1026), Expect = 8.400e-108
Identity = 209/318 (65.72%), Postives = 244/318 (76.73%), Query Frame = 0
Query:   19 LEAYCRSAEKAARAAGELIMASLRERQTNPRLVIESKGGVDLVTEVDRQCEEGIFQALRTKYPTHHFVGEESTYLSGPSSASSPPPFGSPGEAAPTWICDPIDGTTNFVHGHPLVAVAIALSVHQTIVVGVVFIPYLNEMYTAWRGGGGTRCNDTPLC-VGRATGIHDALLVNNIGSSRDWRFSHLSFARLHYLMTRGEPGPLQGLRMSGSACVNLAMVAAGKVDVYLEDGYGGVWDVAAGKILVEEAGGVVVGLGGEAWELNLGKGRVVAGNKGVVMDVVRKVGEAD----RRYRWRERGKTGVVGVGMGLFLWGMK 332
            LE YC+SAE AAR AGELIMASLR RQ+ P L +ESKGGVDLVTEVDR CE+ I QALR +YPTH F+GEES +LS    +SS  PFG PGE+APTWI DPIDGTTNFVHGHP +AVAI LS+HQ +V+GV+++P LNEMY AWR GGG RCND PL  V  A  IHDALLVNNIGS R+  F  LSF RL+ LMT   PGPLQGLRMSGSACVNLA+VA G++D Y+EDG GGVWDVAAGKILVEEAGGVVVG  GE W L +G+GRV+AGN  +V D+V ++ + D    RR R R   K G++ + MG+ L  M+
Sbjct:   17 LETYCQSAENAARNAGELIMASLRARQSRPCLAVESKGGVDLVTEVDRLCEKEITQALRAEYPTHAFIGEESIFLSTGELSSSSAPFGLPGESAPTWIIDPIDGTTNFVHGHPFIAVAIGLSIHQDVVLGVIYLPVLNEMYRAWR-GGGARCNDGPLLKVSGAQSIHDALLVNNIGSCREQEFLQLSFHRLYALMTAKLPGPLQGLRMSGSACVNLALVAGGRLDAYVEDGVGGVWDVAAGKILVEEAGGVVVGWEGEPWVLTMGRGRVIAGNAALVSDLVARMRDVDGRVWRRKRLRVALKVGMIAL-MGVGLLAMR 332          
BLAST of NO06G03960 vs. NCBI_GenBank
Match: XP_005855865.1 (myo-inositol-1(or 4)-monophosphatase [Nannochloropsis gaditana CCMP526] >EKU20490.1 myo-inositol-1(or 4)-monophosphatase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 357.8 bits (917), Expect = 3.700e-95
Identity = 181/250 (72.40%), Postives = 203/250 (81.20%), Query Frame = 0
Query:   19 LEAYCRSAEKAARAAGELIMASLRERQTNPRLVIESKGGVDLVTEVDRQCEEGIFQALRTKYPTHHFVGEESTYLSGPSSASSPPPFGSPGEAAPTWICDPIDGTTNFVHGHPLVAVAIALSVHQTIVVGVVFIPYLNEMYTAWRGGGGTRCNDTPLC-VGRATGIHDALLVNNIGSSRDWRFSHLSFARLHYLMTRGEPGPLQGLRMSGSACVNLAMVAAGKVDVYLEDGYGGVWDVAAGKILVEEAGG 268
            LE YC+SAE AAR AGELIMASLR RQ+ P L +ESKGGVDLVTEVDR CE+ I QALR +YPTH F+GEEST+LS    +SS  PFG PGE+APTWI DPIDGTTNFVHGHP +AVAI LS+HQ +V+GV+++P LNEMY AWR GGG RCND PL  V  A  IHDALLVNNIGS R+  F  LSF RL+ LMT   PGPLQGLRMSGSACVNLA+VA G++D Y+EDG GGVWDVAAGKILVEEAGG
Sbjct:   17 LETYCQSAENAARNAGELIMASLRARQSRPCLAVESKGGVDLVTEVDRLCEKEITQALRAEYPTHAFIGEESTFLSTGELSSSSAPFGLPGESAPTWIIDPIDGTTNFVHGHPFIAVAIGLSIHQDVVLGVIYLPVLNEMYRAWR-GGGARCNDGPLLKVSGAQSIHDALLVNNIGSCREQEFLQLSFHRLYALMTAKLPGPLQGLRMSGSACVNLALVAGGRLDAYVEDGVGGVWDVAAGKILVEEAGG 265          
BLAST of NO06G03960 vs. NCBI_GenBank
Match: XP_005766548.1 (hypothetical protein EMIHUDRAFT_66633 [Emiliania huxleyi CCMP1516] >EOD14119.1 hypothetical protein EMIHUDRAFT_66633 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 211.8 bits (538), Expect = 3.200e-51
Identity = 122/260 (46.92%), Postives = 164/260 (63.08%), Query Frame = 0
Query:   50 LVIESKG----------GVDLVTEVDRQCEEGIFQALRTKYPTHHFVGEESTYLSGPSSASSPPPFGSPGEAAPTWICDPIDGTTNFVHGHPLVAVAIALSVHQTIVVGVVFIPYLNEMYTAWRGGGGTRCNDTPLCVGRATGIHDALLVNNIGSSRDWRFSHLSFARLHYLMTRGEPGPLQGLRMSGSACVNLAMVAAGKVDVYLEDGYGGVWDVAAGKILVEEAGGVVVGLGGEAWELNLGKGRVVAGNKGVVMDVVR 300
            + +ESKG           VDLVT  D+ CEE I   +R ++P H F+GEEST+ +G  +A +P   G      PTWI DP+DGTTNFVHG+  V V+I L+V   +V+GV+F P L+EM  A +GGG T  N  P+ VG A G+ +AL+VNN+G+SR+   + L+ AR+  L+       L+GLR SGSA  N+  VAAG++D Y EDG+GG WDVAAG ++V EAGGV     G  + L  GKG+V+ GN  VV D+ R
Sbjct:   20 VAVESKGSEQGAPAAEASVDLVTATDKACEELIIGTIRERFPKHCFIGEESTF-AGGGAADAPLELGE----QPTWIIDPLDGTTNFVHGYWPVTVSIGLAVRGELVLGVIFNPLLDEMCVATKGGGAT-LNGRPIRVGGAAGVGEALVVNNLGASRNPAMNTLATARIGALL----QASLRGLRNSGSAAQNMIDVAAGRLDAYFEDGFGGPWDVAAGYVIVHEAGGVFRDHLGGPFTLRAGKGQVLCGNAAVVEDIAR 269          
BLAST of NO06G03960 vs. NCBI_GenBank
Match: XP_005779292.1 (hypothetical protein EMIHUDRAFT_73492 [Emiliania huxleyi CCMP1516] >EOD26863.1 hypothetical protein EMIHUDRAFT_73492 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 209.1 bits (531), Expect = 2.100e-50
Identity = 121/260 (46.54%), Postives = 163/260 (62.69%), Query Frame = 0
Query:   50 LVIESKG----------GVDLVTEVDRQCEEGIFQALRTKYPTHHFVGEESTYLSGPSSASSPPPFGSPGEAAPTWICDPIDGTTNFVHGHPLVAVAIALSVHQTIVVGVVFIPYLNEMYTAWRGGGGTRCNDTPLCVGRATGIHDALLVNNIGSSRDWRFSHLSFARLHYLMTRGEPGPLQGLRMSGSACVNLAMVAAGKVDVYLEDGYGGVWDVAAGKILVEEAGGVVVGLGGEAWELNLGKGRVVAGNKGVVMDVVR 300
            + +ESKG           VDLVT  D+ CEE I   +R ++P H F+GEEST+ +G  +A +P   G      PTWI DP+DGTTNFVHG+  V V+I L+V   +V+GV+F P L+EM  A + GG T  N  P+ VG A G+ +AL+VNN+G+SR+   + L+ AR+  L+       L+GLR SGSA  N+  VAAG++D Y EDG+GG WDVAAG ++V EAGGV     G  + L  GKG+V+ GN  VV D+ R
Sbjct:   20 VAVESKGSEQGAPAAEASVDLVTATDKACEELIIGTIRERFPKHCFIGEESTF-AGGGAADAPLELGE----QPTWIIDPLDGTTNFVHGYWPVTVSIGLAVRGELVLGVIFNPLLDEMCVATKDGGAT-LNGRPIRVGGAAGVGEALVVNNLGASRNPAMNTLATARIGALL----QASLRGLRNSGSAAQNMIDVAAGRLDAYFEDGFGGPWDVAAGYVIVHEAGGVFRDHLGGPFTLRAGKGQVLCGNAAVVEDIAR 269          
BLAST of NO06G03960 vs. NCBI_GenBank
Match: GAQ77686.1 (inositol monophosphatase [Klebsormidium nitens])

HSP 1 Score: 202.2 bits (513), Expect = 2.600e-48
Identity = 117/283 (41.34%), Postives = 171/283 (60.42%), Query Frame = 0
Query:   19 LEAYCRSAEKAARAAGELIMASLRERQTNPRLVIESKGGVDLVTEVDRQCEEGIFQALRTKYPTHHFVGEESTYLSGPSSASSPPPFGSPGEAAPTWICDPIDGTTNFVHGHPLVAVAIALSVHQTIVVGVVFIPYLNEMYTAWRGGGGTRCNDTPLCVGRATGIHDALLVNNIGSSRDWRFSHLSFARLHYLMTRGEPGPLQGLRMSGSACVNLAMVAAGKVDVYLEDGYGGVWDVAAGKILVEEAGGVVVGLGGEAWELNLGKGRVVAGNKGVVMDVVRKV 302
            L+A    A  AA+ AGE+I  S  E +      ++ KG VDLVTE D+ CE+ IF+A++  +P+H F+GEE + LSG +  +            PTW+ DP+DGTTNFVH  P V V+I L++ + +VVGVV+ P LNE+YTA RG G    ND  + V + T I +ALL   +G++RD      +  R++ L+ +     ++ LR SGS  +NLA +A G++D++ E  +GG WDVAAG +LVEEAGG V    G A+++     RV A N  ++ D+VR +
Sbjct:    9 LKACLEVAVAAAKQAGEVIQKSFYETKN-----VQHKGKVDLVTETDKACEDLIFKAIQKNFPSHKFIGEEGSALSGTADLTD----------EPTWMVDPLDGTTNFVHRFPFVCVSIGLTIQKEVVVGVVYNPILNELYTAVRGSGAF-LNDNQIHVTQTTDIGNALLATEVGTARDKETVDATTGRINQLLYK-----VRSLRCSGSCALNLAGIACGRLDLFYEYNFGGPWDVAAGSLLVEEAGGRVADPSGGAFDVM--SRRVAAANGSLIEDLVRNL 268          
BLAST of NO06G03960 vs. NCBI_GenBank
Match: GAX80036.1 (hypothetical protein CEUSTIGMA_g7475.t1 [Chlamydomonas eustigma])

HSP 1 Score: 192.2 bits (487), Expect = 2.700e-45
Identity = 111/274 (40.51%), Postives = 161/274 (58.76%), Query Frame = 0
Query:   20 EAYCRSAEKAARAAGELIMASLRERQTNPRLVIESKGGVDLVTEVDRQCEEGIFQALRTKYPTHHFVGEESTYLSGPSSASSPPPFGSPGEAAPTWICDPIDGTTNFVHGHPLVAVAIALSVHQTIVVGVVFIPYLNEMYTAWRGGGGTRCNDTPLCVGRATGIHDALLVNNIGSSRDWRFSHLSFARLHYLMTRGEPGPLQGLRMSGSACVNLAMVAAGKVDVYLEDGYGGVWDVAAGKILVEEAGGVVVGLGGEAWELNLGKGRVVAGNKGV 294
            + Y   A  AA AAG +I  +   R  +    +E KG VDLVTE D++CE  +   ++  +P+H F+GEE +   G         F +     PTW+CDP+DGTTNFVHG P V V+IAL + + ++VGVV  P LNE YTA + G G + ND P+ V     +  AL+   +G+SRD       F+R+  L +       + +R  GS  +NL  VA+G++D + E G+GG WDVAAGK++VEEAGG+V+   G  +++ +G+ RV+AGN  V
Sbjct:    8 DKYLSVALAAANAAGNVIKDAFSSRSKH----VEHKGTVDLVTETDKKCESLVLSLIQETFPSHKFIGEEGSAAQG---------FTAELTDDPTWMCDPLDGTTNFVHGFPFVCVSIALVIGREVIVGVVHNPILNETYTAIK-GQGAKLNDAPISVSATCDLGTALIATEVGTSRDQETLSTIFSRMKTLTSAA-----RAVRCCGSCAMNLCGVASGRLDAFYEIGFGGCWDVAAGKLIVEEAGGMVLDPQGGPFDV-MGR-RVLAGNPAV 260          
BLAST of NO06G03960 vs. NCBI_GenBank
Match: PIA38370.1 (hypothetical protein AQUCO_02800217v1 [Aquilegia coerulea])

HSP 1 Score: 192.2 bits (487), Expect = 2.700e-45
Identity = 114/286 (39.86%), Postives = 166/286 (58.04%), Query Frame = 0
Query:   19 LEAYCRSAEKAARAAGELIMASLRERQTNPRLVIESKGGVDLVTEVDRQCEEGIFQALRTKYPTHHFVGEESTYLSGPSSASSPPPFGSPGEAAPTWICDPIDGTTNFVHGHPLVAVAIALSVHQTIVVGVVFIPYLNEMYTAWRGGGGTRCNDTPLCVGRATGIHDALLVNNIGSSRDWRFSHLSFARLHYLMTRGEPGPLQGLRMSGSACVNLAMVAAGKVDVYLEDGYGGVWDVAAGKILVEEAGGVVVGLGGEAWELNLGKGRVVAGNKGVVMDVVRKVGEA 305
            LE +   A  AA+ AGE+I     E++      IE KG VDLVTE D+ CE+ IF  L+   P H F+GEE+T  +G +  +            PTWI DP+DGTTNFVHG P V V+I L++++   VGVV+ P L+E++T  RG G    N  P+ V   + +  +LLV  +G+ RD      +  RL+ L+ +     ++ LRMSGS  +NL  +A G+VD++ E G+GG WDVA G ++VEEAGG++    G+A+  N+   R+ A N  +    V+ +GEA
Sbjct:    7 LEDFLNVAIDAAKRAGEIIRKGFHEKKN-----IEHKGQVDLVTETDKACEDLIFNHLKQHCPGHKFIGEETTAANGITELTD----------QPTWIVDPLDGTTNFVHGFPFVCVSIGLTINKVPTVGVVYNPILDELFTGIRGKGAF-LNGNPIKVSTQSELVKSLLVTEVGTKRDTTTVDATTGRLNRLLFK-----VRSLRMSGSCALNLCGIACGRVDLFYELGFGGPWDVAGGAVIVEEAGGLIFDPSGKAF--NITAQRIAASNPNLKEAFVQALGEA 269          
BLAST of NO06G03960 vs. NCBI_GenBank
Match: OVA09265.1 (Inositol monophosphatase [Macleaya cordata])

HSP 1 Score: 191.0 bits (484), Expect = 5.900e-45
Identity = 112/287 (39.02%), Postives = 167/287 (58.19%), Query Frame = 0
Query:   19 LEAYCRSAEKAARAAGELIMASLRERQTNPRLVIESKGGVDLVTEVDRQCEEGIFQALRTKYPTHHFVGEESTYLSGPSSASSPPPFGSPGEAAPTWICDPIDGTTNFVHGHPLVAVAIALSVHQTIVVGVVFIPYLNEMYTAWRGGGGTRCNDTPLCVGRATGIHDALLVNNIGSSRDWRFSHLSFARLHYLMTRGEPGPLQGLRMSGSACVNLAMVAAGKVDVYLEDGYGGVWDVAAGKILVEEAGGVVVGLGGEAWELNLGKGRVVAGNKGVVMDVVRKVGEAD 306
            LE +   A +AA+ AGE+I     E++      +E KG VDLVTE D+ CE+ IF  L+  +P H F+GEE+T  +G +  +            PTWI DP+DGTTNFVHG P V V+I L++ +   VGVV+ P +NE++T  RG G    N+TP+ V   T +  +LL   +G+ RD      +  R++ L+ +     ++ LRMSGS  +NL  +A G++D++ E G+GG WDVA G ++V+EAGG+V    G+  E ++   RV A N  V    V+ + EA+
Sbjct:    7 LEQFLSVAIEAAKKAGEIIRKGFHEKKN-----VEHKGQVDLVTETDKACEDLIFNHLKQHFPDHKFIGEETTAANGTTELTD----------HPTWIIDPLDGTTNFVHGFPFVCVSIGLTIGKVPTVGVVYNPIINELFTGVRGKGAF-LNETPIKVSSQTELVKSLLATEVGTKRDKSTVDATTNRINSLLFK-----VRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAGGAVIVQEAGGLVFDPSGK--EFDITSQRVAASNPYVKDAFVQALKEAE 270          
BLAST of NO06G03960 vs. NCBI_GenBank
Match: KYP62674.1 (Inositol monophosphatase 3 [Cajanus cajan])

HSP 1 Score: 190.7 bits (483), Expect = 7.700e-45
Identity = 115/286 (40.21%), Postives = 161/286 (56.29%), Query Frame = 0
Query:   19 LEAYCRSAEKAARAAGELIMASLRERQTNPRLVIESKGGVDLVTEVDRQCEEGIFQALRTKYPTHHFVGEESTYLSGPSSASSPPPFGSPGEAAPTWICDPIDGTTNFVHGHPLVAVAIALSVHQTIVVGVVFIPYLNEMYTAWRGGGGTRCNDTPLCVGRATGIHDALLVNNIGSSRDWRFSHLSFARLHYLMTRGEPGPLQGLRMSGSACVNLAMVAAGKVDVYLEDGYGGVWDVAAGKILVEEAGGVVVGLGGEAWELNLGKGRVVAGN---KGVVMDVVRKV 302
            L  +  SA  AA  AGE+I     + +      +E KG VDLVTE D+ CEE IF  L+  YPTH F+GEE+T   G +  +            PTWI DP+DGTTNFVHG P V V+I L++ +T  VGVV+ P +NE++T  RG G    N  P+ V   T +  +LL    G+ RD      S  R++ L+ +     ++ LRMSGS  +NL  +A G++DV+ E G+GG WDVA G ++V EAGGVV    G   + ++   RV A N   K  ++D +R++
Sbjct:   24 LSEFLASAVDAAHKAGEIIRKGFYQTKN-----VEHKGQVDLVTETDKACEELIFNHLKELYPTHKFIGEETTAACGSTELTD----------EPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKTPTVGVVYNPIINELFTGIRGKGAF-LNGNPIKVSSQTELISSLLATEAGTKRDKETVDASTNRINSLLFK-----VRSLRMSGSCALNLCGIACGRLDVFFELGFGGPWDVAGGAVIVREAGGVVFDPSGA--DFDITSQRVAASNPFLKDALVDALRQM 286          
BLAST of NO06G03960 vs. NCBI_GenBank
Match: XP_020221321.1 (inositol-phosphate phosphatase-like [Cajanus cajan])

HSP 1 Score: 190.7 bits (483), Expect = 7.700e-45
Identity = 115/286 (40.21%), Postives = 161/286 (56.29%), Query Frame = 0
Query:   19 LEAYCRSAEKAARAAGELIMASLRERQTNPRLVIESKGGVDLVTEVDRQCEEGIFQALRTKYPTHHFVGEESTYLSGPSSASSPPPFGSPGEAAPTWICDPIDGTTNFVHGHPLVAVAIALSVHQTIVVGVVFIPYLNEMYTAWRGGGGTRCNDTPLCVGRATGIHDALLVNNIGSSRDWRFSHLSFARLHYLMTRGEPGPLQGLRMSGSACVNLAMVAAGKVDVYLEDGYGGVWDVAAGKILVEEAGGVVVGLGGEAWELNLGKGRVVAGN---KGVVMDVVRKV 302
            L  +  SA  AA  AGE+I     + +      +E KG VDLVTE D+ CEE IF  L+  YPTH F+GEE+T   G +  +            PTWI DP+DGTTNFVHG P V V+I L++ +T  VGVV+ P +NE++T  RG G    N  P+ V   T +  +LL    G+ RD      S  R++ L+ +     ++ LRMSGS  +NL  +A G++DV+ E G+GG WDVA G ++V EAGGVV    G   + ++   RV A N   K  ++D +R++
Sbjct:    9 LSEFLASAVDAAHKAGEIIRKGFYQTKN-----VEHKGQVDLVTETDKACEELIFNHLKELYPTHKFIGEETTAACGSTELTD----------EPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKTPTVGVVYNPIINELFTGIRGKGAF-LNGNPIKVSSQTELISSLLATEAGTKRDKETVDASTNRINSLLFK-----VRSLRMSGSCALNLCGIACGRLDVFFELGFGGPWDVAGGAVIVREAGGVVFDPSGA--DFDITSQRVAASNPFLKDALVDALRQM 271          
The following BLAST results are available for this feature:
BLAST of NO06G03960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26390.18.400e-10865.72inositol monophosphatase [Nannochloropsis gaditana... [more]
XP_005855865.13.700e-9572.40myo-inositol-1(or 4)-monophosphatase [Nannochlorop... [more]
XP_005766548.13.200e-5146.92hypothetical protein EMIHUDRAFT_66633 [Emiliania h... [more]
XP_005779292.12.100e-5046.54hypothetical protein EMIHUDRAFT_73492 [Emiliania h... [more]
GAQ77686.12.600e-4841.34inositol monophosphatase [Klebsormidium nitens][more]
GAX80036.12.700e-4540.51hypothetical protein CEUSTIGMA_g7475.t1 [Chlamydom... [more]
PIA38370.12.700e-4539.86hypothetical protein AQUCO_02800217v1 [Aquilegia c... [more]
OVA09265.15.900e-4539.02Inositol monophosphatase [Macleaya cordata][more]
KYP62674.17.700e-4540.21Inositol monophosphatase 3 [Cajanus cajan][more]
XP_020221321.17.700e-4540.21inositol-phosphate phosphatase-like [Cajanus cajan... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000077NSK000077Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03960.1NO06G03960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|651794gene_6728Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101240g1gene4137Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03960.1NO06G03960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03960 ID=NO06G03960|Name=NO06G03960|organism=Nannochloropsis oceanica|type=gene|length=1893bp
ATGCCACTATCAAACGATGTTCCCACCCCTCCGCCCCCTCCGCCCCCCGA
AGAACTCGAAGCCTACTGCCGAAGCGCCGAAAAAGCGGCACGTGCTGCAG
GCGAGCTCATCATGGCCTCCCTACGTGAGCGTCAGACGAACCCTCGCCTT
GTTATCGAGAGCAAGGGCGGTGTGGATCTGGTCACAGAAGTCGATCGACA
ATGCGAAGAAGGCATTTTCCAAGCTCTTCGGACCAAGTATCCTACGCATC
ATTTTGTCGGGGAAGAGTCTACCTATCTCTCCGGCCCATCCTCCGCCTCC
TCCCCTCCTCCTTTCGGCTCCCCTGGTGAAGCAGCTCCCACCTGGATCTG
CGATCCCATCGATGgtacacttgatgcactcattttcaaaccccacttcc
tccccttctcccgcccctccgaaatcacactttccataaactcacttttt
attatcctctcgtctcactcctacctctctaacagGCACAACCAACTTTG
TCCATGGCCACCCACTTGTCGCAGTCGCCATTGCCCTCAGCGTCCACCAA
ACTATCGTCGTCGGCGTGGTCTTCATCCCCTACCTGAACGAGATGTACAC
TGCGTGGCGAGGGGGAGGAGGCACACGCTGCAATGATACCCCCCTCTGCG
TGGGCAGGGCCACGGGTATACATGATGCTTTGCTCGTTAACAATATAGGG
TCGTCCCGTGACTGGCGTTTCTCCCATCTGTCCTTCGCACGCCTCCATTA
CCTAATGACGAGGGGAGAGCCCGGACCATTGCAGGGTCTGCGGATGTCGG
GCTCGGCCTGTGTGAATCTTGCCATGGTGGCCGCGGGTAAGGTTGACGTG
TATTTGGAAGATGGTTATGGAGGTGTGTGGGATGTGGCCGCCGGGAAAAT
ACTCGTAGAGGAGGCGGGGGGGGTCGTTGTAGGCTTGGGCGGAGAGGCTT
GGGAGTTGAATTTAGGGAAGGGCAGGGTGGTGGCCGGTAATAAAGGTGTG
GTGATGGACGTGGTACGAAAGGTAGGGGAGGCGGACAGGAGGTACCGGTG
GAGGGAGCGAGGGAAGACGGGCGTGGTTGGAGTGGGGATGGGGTTATTTT
TGTGGGGGATGAAATGGTACGTGTCGAAGAGAAGTGGAGAGAGAACATAA
GCAGGTGGGTGAAAATGATGCAGAAGAAATAAAAGAAGAAATTAAACAAG
GAGAAGGAGAAGAAGAGAGAGCTTGTCTTTCTTTATGTCAAAGGATTAAT
TATGCGGTTTACATATTTTGCGTGTCCTGTGGAGTTAGTGCACAGCCGTG
CTCGCATTCTATTTTCATCTTCCATTGTCCTGCTCCCCCTCTTTCGATTC
CTCCCCTACGGCCTACAGCTTGCCTATTCTACCCTGCTACTGTCGACAGA
TTCGCCTCTTCCCCTCCCTCCTTCTCTCCCTCCTCCTCCTCCTTCTCCAA
AGTTGTAGCAGCCCCGGCCGGCCCCTGCACACTCACCATGTCGTTCAAGG
TTTGACTAAACTCGACGTCACCACCCACGATCCCATTCACCATCCCCCCG
CCCTCCTCCCTCTCTCCCTTGTCCCCCACCGCCGCAGCAGCCGCGGCCGC
CCTCTCCATGATCGCCACATCGTTCAAGGTTTGACTCGACTCCAAATCAC
AGTACGAAAAGTCACTAAATCGACACGACAAGGACAAGAGCGACACGCTT
TCACCCCCTTCTCCCTCCCTCCCTCCCTCCTCCATGTCGGACGCAAACGA
CTCAAATTGATCCGCTGCGGGCCTCCGCCGATCTCTCCCGCGTTTTCCCC
AACCTCCCTCCCTCTCTCCCCCTCCCTCCCCCTCCATTAAAAACAATCCC
GCCTCCGCCCCCATCACTCCAGCCGCCGTCAGGTCAATGCTTC
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protein sequence of NO06G03960.1

>NO06G03960.1-protein ID=NO06G03960.1-protein|Name=NO06G03960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=343bp
MPLSNDVPTPPPPPPPEELEAYCRSAEKAARAAGELIMASLRERQTNPRL
VIESKGGVDLVTEVDRQCEEGIFQALRTKYPTHHFVGEESTYLSGPSSAS
SPPPFGSPGEAAPTWICDPIDGTTNFVHGHPLVAVAIALSVHQTIVVGVV
FIPYLNEMYTAWRGGGGTRCNDTPLCVGRATGIHDALLVNNIGSSRDWRF
SHLSFARLHYLMTRGEPGPLQGLRMSGSACVNLAMVAAGKVDVYLEDGYG
GVWDVAAGKILVEEAGGVVVGLGGEAWELNLGKGRVVAGNKGVVMDVVRK
VGEADRRYRWRERGKTGVVGVGMGLFLWGMKWYVSKRSGERT*
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Synonyms
Publications