NO06G03900, NO06G03900 (gene) Nannochloropsis oceanica

Overview
NameNO06G03900
Unique NameNO06G03900
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length837
Alignment locationchr6:1091658..1092494 +

Link to JBrowse

Properties
Property NameValue
DescriptionShort-chain dehydrogenase reductase sdr
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1091658..1092494 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004318enoyl-[acyl-carrier-protein] reductase (NADH) activity
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006633fatty acid biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR014358Enoyl-ACP_Rdtase_NADH
IPR002347Glc/ribitol_DH
Homology
[Close]
BLAST of NO06G03900 vs. NCBI_GenBank
Match: EWM26388.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 406.8 bits (1044), Expect = 5.600e-110
Identity = 209/278 (75.18%), Postives = 237/278 (85.25%), Query Frame = 0 
Query:    1 MLAGKRCLVVGLANHRSLAWGCAQAWRAAGAQVLVSSLPRFQPSIAKLLASSWPEAKAQGPEQYSLACDVMDPESVKAMMARVSERFDGELDVLLHAVAYASAPAMNGPFIGTTAEDFAQAHLVSSHSLITLAREALPLLTDPKRDSEPTPSAIRARKRNSSILTLSYLGAQRAILPYKVMGPAKASLEATVRLLAAELGPPPNQVRVNAVGPGPIHTLSARGIPGFGEMCKEAAARAPLRRNADLEDVGGAAVFLASDAAKAITGQVLYVDGGLNVM 279
            ML+GKRCLVVGLANHRSLAW CAQAWRAAGA+V+VSSLPRF+ S+ KLLASSWPEA  Q  E+YS+ CD+MD ES+K MMA+VSERF G+LDV+LHAVA AS PAM   F  TTAE FAQAHLVS+HSL+TLAREALPLL      +  T  A     RNSSILTLSYLGAQRAI PYKVMGPAKASLEA+VRLLAAELGPPP+Q+RVNA+  GP+ TLSARGIPGF +MC+ AAA APLRRNADLEDVGGAAVFLASDAAK++TGQV++VDGGL++M
Sbjct:    1 MLSGKRCLVVGLANHRSLAWACAQAWRAAGAEVMVSSLPRFESSVQKLLASSWPEAGGQESEKYSVTCDIMDQESLKTMMAKVSERFGGKLDVVLHAVAQASPPAMQNAFTETTAEAFAQAHLVSAHSLVTLAREALPLLAHRHSHTAGTQGASTRGTRNSSILTLSYLGAQRAIPPYKVMGPAKASLEASVRLLAAELGPPPHQIRVNALSVGPVATLSARGIPGFNDMCRAAAASAPLRRNADLEDVGGAAVFLASDAAKSVTGQVIFVDGGLSIM 278
[Close]
BLAST of NO06G03900 vs. NCBI_GenBank
Match: WP_015896172.1 (enoyl-ACP reductase [Acidobacterium capsulatum] >ACO33666.1 enoyl-[acyl-carrier-protein] reductase [Acidobacterium capsulatum ATCC 51196])

HSP 1 Score: 213.0 bits (541), Expect = 1.200e-51
Identity = 127/277 (45.85%), Postives = 167/277 (60.29%), Query Frame = 0 
Query:    2 LAGKRCLVVGLANHRSLAWGCAQAWRAAGAQVLVSSLPRFQPSIAKLLASSWPEAKAQGPEQYSLACDVMDPESVKAMMARVSERFDGELDVLLHAVAYASAPAMNGPFIGTTAEDFAQAHLVSSHSLITLAREALPLLTDPKRDSEPTPSAIRARKRNSSILTLSYLGAQRAILPYKVMGPAKASLEATVRLLAAELGPPPNQVRVNAVGPGPIHTLSARGIPGFGEMCKEAAARAPLRRNADLEDVGGAAVFLASDAAKAITGQVLYVDGGLNVM 279
            L G+  +V G+AN RS+AWG  Q   AAGA + +        + A+ L    P A+A         CDV   E ++ + A+  ER+ G+LD+L+H+VAYA A A+   F+ T+ EDF  AH +S +SLI L+R A PL+T+                   SI+TLSY GA++ +  Y VMG AKA+LEATVR LAA+LG     +RVNA+  GPI TL+ARGI G G+M K  A RAPL RN D  +VGGAAVFLAS  A  ITG+ +YVD G N+M
Sbjct:    4 LKGRVAVVFGVANKRSIAWGIVQQLHAAGATLAIGYQNERLRAEAESLIQEVPGAEA-------FQCDVSQDEEIERVFAQFKERY-GKLDILVHSVAYAPADALKNDFVLTSREDFRVAHDISVYSLIALSRAAAPLMTE-----------------GGSIMTLSYFGAEKVVPHYNVMGVAKAALEATVRYLAADLG--KQNIRVNAISAGPIKTLAARGIGGLGDMLKAHADRAPLHRNTDQSEVGGAAVFLASPLASGITGETIYVDSGYNIM 253
[Close]
BLAST of NO06G03900 vs. NCBI_GenBank
Match: XP_002908557.1 (enoyl-[acyl-carrier-protein] reductase [NADH], putative [Phytophthora infestans T30-4] >EEY61640.1 enoyl-[acyl-carrier-protein] reductase [NADH], putative [Phytophthora infestans T30-4])

HSP 1 Score: 212.6 bits (540), Expect = 1.500e-51
Identity = 129/278 (46.40%), Postives = 170/278 (61.15%), Query Frame = 0 
Query:    1 MLAGKRCLVVGLANHRSLAWGCAQAWRAAGAQVLVSSLPRFQPSIAKLLASSWPEAKAQGPEQYSLACDVMDPESVKAMMARVSERFDGELDVLLHAVAYASAPAMNGPFIGTTAEDFAQAHLVSSHSLITLAREALPLLTDPKRDSEPTPSAIRARKRNSSILTLSYLGAQRAILPYKVMGPAKASLEATVRLLAAELGPPPNQVRVNAVGPGPIHTLSARGIPGFGEMCKEAAARAPLRRNADLEDVGGAAVFLASDAAKAITGQVLYVDGGLNVM 279
            +L GKR LVVGL N  SLA G  Q+  ++GA V+VSS      S  K  A   P  KA G   +   CDV + ES+  +M R  E FDGELD+L+H+VA+A   A     + T    +AQA  VS++SL+ LAR A PL+ +   D+           R+ S+L L+Y G+ + +  Y VMGPAKA+LEAT R LA ELG  P+ +RVN + PGP++T+SARGIPG  +M + A   APLRRN+   DVG  A FL+SD A A+TGQ  +VDGGL+ M
Sbjct:    4 LLRGKRALVVGLMNKHSLAAGITQSLLSSGASVVVSSKMPLSESHIKSCAFQIP--KATGHALHFEPCDVENDESIDHLMERCGEIFDGELDILVHSVAFAPREAFTNGLLNTPRAAWAQALDVSAYSLVGLARAAKPLMANQDGDT-----------RDRSVLALTYAGSTKVVPNYNVMGPAKAALEATARQLAYELG--PDGIRVNCLSPGPMNTVSARGIPGISKMRRYAENHAPLRRNSSSGDVGSVAAFLSSDLAAAVTGQTFHVDGGLSAM 266
[Close]
BLAST of NO06G03900 vs. NCBI_GenBank
Match: ETM02265.1 (hypothetical protein L917_01235 [Phytophthora parasitica] >ETP53852.1 hypothetical protein F442_01288 [Phytophthora parasitica P10297])

HSP 1 Score: 210.7 bits (535), Expect = 5.900e-51
Identity = 127/279 (45.52%), Postives = 167/279 (59.86%), Query Frame = 0 
Query:    1 MLAGKRCLVVGLANHRSLAWGCAQAWRAAGAQVLVSSLPRFQPSIAKLLASSWPE-AKAQGPEQYSLACDVMDPESVKAMMARVSERFDGELDVLLHAVAYASAPAMNGPFIGTTAEDFAQAHLVSSHSLITLAREALPLLTDPKRDSEPTPSAIRARKRNSSILTLSYLGAQRAILPYKVMGPAKASLEATVRLLAAELGPPPNQVRVNAVGPGPIHTLSARGIPGFGEMCKEAAARAPLRRNADLEDVGGAAVFLASDAAKAITGQVLYVDGGLNVM 279
            +L GKR LVVGL N  SLA G  Q+  ++GA V+VSS      S  K  A   P+   A  P  +   CDV   ES+  +M R  + F GELD+L+H+VA+A   A     + T    +AQA  VS++SL+ L R A PL+   + ++           R+ S+L L+Y G+ + +  Y VMGPAKA+LEAT R LA ELG  P  +RVN + PGP++T+SARGIPG  +M K A   APLRRN+   DVG  A FL+SD A AITGQ +YVDGGL+ M
Sbjct:    4 LLRGKRALVVGLMNKHSLAAGITQSLLSSGASVVVSSKTPLSESQIKSCAFEIPDTVDAPSPALHFEPCDVESDESIDQLMQRCGQIFSGELDILVHSVAFAPREAFTNGLLDTPRAAWAQALGVSAYSLVALTRAAKPLMASQEGEA-----------RDRSVLALTYAGSTKVVPNYNVMGPAKAALEATARQLAYELG--PEGIRVNCLSPGPMNTVSARGIPGISKMRKYAENHAPLRRNSSNGDVGSVATFLSSDLAAAITGQTIYVDGGLSAM 269
[Close]
BLAST of NO06G03900 vs. NCBI_GenBank
Match: ETO84779.1 (hypothetical protein F444_01349 [Phytophthora parasitica P1976])

HSP 1 Score: 210.7 bits (535), Expect = 5.900e-51
Identity = 127/279 (45.52%), Postives = 167/279 (59.86%), Query Frame = 0 
Query:    1 MLAGKRCLVVGLANHRSLAWGCAQAWRAAGAQVLVSSLPRFQPSIAKLLASSWPE-AKAQGPEQYSLACDVMDPESVKAMMARVSERFDGELDVLLHAVAYASAPAMNGPFIGTTAEDFAQAHLVSSHSLITLAREALPLLTDPKRDSEPTPSAIRARKRNSSILTLSYLGAQRAILPYKVMGPAKASLEATVRLLAAELGPPPNQVRVNAVGPGPIHTLSARGIPGFGEMCKEAAARAPLRRNADLEDVGGAAVFLASDAAKAITGQVLYVDGGLNVM 279
            +L GKR LVVGL N  SLA G  Q+  ++GA V+VSS      S  K  A   P+   A  P  +   CDV   ES+  +M R  + F GELD+L+H+VA+A   A     + T    +AQA  VS++SL+ L R A PL+   + ++           R+ S+L L+Y G+ + +  Y VMGPAKA+LEAT R LA ELG  P  +RVN + PGP++T+SARGIPG  +M K A   APLRRN+   DVG  A FL+SD A AITGQ +YVDGGL+ M
Sbjct:    4 LLRGKRALVVGLMNKHSLAAGITQSLLSSGASVVVSSKTPLSESQIKSCAFEIPDTVDAPSPALHFEPCDVESDESIDQLMQRCGQIFSGELDILVHSVAFAPREAFTNGLLDTPRAAWAQALDVSAYSLVALTRAAKPLMASQEGEA-----------RDRSVLALTYAGSTKVVPNYNVMGPAKAALEATARQLAYELG--PEGIRVNCLSPGPMNTVSARGIPGISKMRKYAENHAPLRRNSSNGDVGSVATFLSSDLAAAITGQTIYVDGGLSAM 269
[Close]
BLAST of NO06G03900 vs. NCBI_GenBank
Match: XP_008891007.1 (hypothetical protein PPTG_01154 [Phytophthora parasitica INRA-310] >ETN25012.1 hypothetical protein PPTG_01154 [Phytophthora parasitica INRA-310])

HSP 1 Score: 210.3 bits (534), Expect = 7.700e-51
Identity = 127/279 (45.52%), Postives = 166/279 (59.50%), Query Frame = 0 
Query:    1 MLAGKRCLVVGLANHRSLAWGCAQAWRAAGAQVLVSSLPRFQPSIAKLLASSWPE-AKAQGPEQYSLACDVMDPESVKAMMARVSERFDGELDVLLHAVAYASAPAMNGPFIGTTAEDFAQAHLVSSHSLITLAREALPLLTDPKRDSEPTPSAIRARKRNSSILTLSYLGAQRAILPYKVMGPAKASLEATVRLLAAELGPPPNQVRVNAVGPGPIHTLSARGIPGFGEMCKEAAARAPLRRNADLEDVGGAAVFLASDAAKAITGQVLYVDGGLNVM 279
            +L GKR LVVGL N  SLA G  Q+  ++GA V+VSS      S  K  A   P+   A  P  +   CDV   ES+  +M R  + F GELD+L+H+VA+A   A     + T    +AQA  VS++SL+ L R A PL+   + ++           R+ S+L L+Y G+ + +  Y VMGPAKA+LEAT R LA ELG  P  +RVN + PGP++T+SARGIPG  +M K A   APLRRN+   DVG  A FL+SD A AITGQ +YVDGGL  M
Sbjct:    4 LLRGKRALVVGLMNKHSLAAGITQSLLSSGASVVVSSKTPLSESHIKSCAFEIPDTVDAPSPALHFEPCDVESDESIDQLMQRCGQIFSGELDILVHSVAFAPREAFTNGLLDTPRAAWAQALDVSAYSLVALTRAAKPLMASQEGEA-----------RDRSVLALTYAGSTKVVPNYNVMGPAKAALEATARQLAYELG--PEGIRVNCLSPGPMNTVSARGIPGISKMRKYAENHAPLRRNSSNGDVGSVATFLSSDLAAAITGQTIYVDGGLGAM 269
[Close]
BLAST of NO06G03900 vs. NCBI_GenBank
Match: ETP25845.1 (hypothetical protein F441_01326 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 210.3 bits (534), Expect = 7.700e-51
Identity = 127/279 (45.52%), Postives = 166/279 (59.50%), Query Frame = 0 
Query:    1 MLAGKRCLVVGLANHRSLAWGCAQAWRAAGAQVLVSSLPRFQPSIAKLLASSWPE-AKAQGPEQYSLACDVMDPESVKAMMARVSERFDGELDVLLHAVAYASAPAMNGPFIGTTAEDFAQAHLVSSHSLITLAREALPLLTDPKRDSEPTPSAIRARKRNSSILTLSYLGAQRAILPYKVMGPAKASLEATVRLLAAELGPPPNQVRVNAVGPGPIHTLSARGIPGFGEMCKEAAARAPLRRNADLEDVGGAAVFLASDAAKAITGQVLYVDGGLNVM 279
            +L GKR LVVGL N  SLA G  Q+  ++GA V+VSS      S  K  A   P+   A  P  +   CDV   ES+  +M R  + F GELD+L+H+VA+A   A     + T    +AQA  VS++SL+ L R A PL+   + ++           R+ S+L L+Y G+ + +  Y VMGPAKA+LEAT R LA ELG  P  +RVN + PGP++T+SARGIPG  +M K A   APLRRN    DVG  A FL+SD A AITGQ +YVDGGL+ M
Sbjct:    4 LLRGKRALVVGLMNKHSLAAGITQSLLSSGASVVVSSKTPLSESHIKSCAFEIPDTVDAPSPALHFEPCDVESDESIDQLMQRCGQIFSGELDILVHSVAFAPREAFTNGLLDTPRAAWAQALDVSAYSLVALTRAAKPLMASQEGEA-----------RDRSVLVLTYAGSTKVVPNYNVMGPAKAALEATARQLAYELG--PEGIRVNCLSPGPMNTVSARGIPGISKMRKYAENHAPLRRNTSNGDVGSVATFLSSDLAAAITGQTIYVDGGLSAM 269
[Close]
BLAST of NO06G03900 vs. NCBI_GenBank
Match: ETK95842.1 (hypothetical protein L915_01270 [Phytophthora parasitica])

HSP 1 Score: 208.4 bits (529), Expect = 2.900e-50
Identity = 126/279 (45.16%), Postives = 166/279 (59.50%), Query Frame = 0 
Query:    1 MLAGKRCLVVGLANHRSLAWGCAQAWRAAGAQVLVSSLPRFQPSIAKLLASSWPE-AKAQGPEQYSLACDVMDPESVKAMMARVSERFDGELDVLLHAVAYASAPAMNGPFIGTTAEDFAQAHLVSSHSLITLAREALPLLTDPKRDSEPTPSAIRARKRNSSILTLSYLGAQRAILPYKVMGPAKASLEATVRLLAAELGPPPNQVRVNAVGPGPIHTLSARGIPGFGEMCKEAAARAPLRRNADLEDVGGAAVFLASDAAKAITGQVLYVDGGLNVM 279
            +L GKR LVVGL N  SLA G  Q+  ++GA V+VSS      S  K  A   P+   A  P  +   CDV   ES+  +M R  + F GELD+L+H+VA+A   A     + T    +AQA  VS++SL+ L R A PL+   + ++           R+ S+L L+Y G+ + +  Y VMGPAKA+LEAT R LA ELG  P  +RVN + PGP++T+SARGIPG  +M K A   APLRRN+   DVG  A FL+SD A AITGQ +YVD GL+ M
Sbjct:    4 LLRGKRALVVGLMNKHSLAAGITQSLLSSGASVVVSSKTPLSESQIKSCAFEIPDTVDAPSPALHFEPCDVESDESIDQLMQRCGQIFSGELDILVHSVAFAPREAFTNGLLDTPRAAWAQALDVSAYSLVALTRAAKPLMASQEGEA-----------RDRSVLVLTYAGSTKVVPNYNVMGPAKAALEATARQLAYELG--PEGIRVNCLSPGPMNTVSARGIPGISKMRKYAENHAPLRRNSSNGDVGSVATFLSSDLAAAITGQTIYVDSGLSAM 269
[Close]
BLAST of NO06G03900 vs. NCBI_GenBank
Match: ETL49220.1 (hypothetical protein L916_01256 [Phytophthora parasitica])

HSP 1 Score: 208.4 bits (529), Expect = 2.900e-50
Identity = 126/279 (45.16%), Postives = 166/279 (59.50%), Query Frame = 0 
Query:    1 MLAGKRCLVVGLANHRSLAWGCAQAWRAAGAQVLVSSLPRFQPSIAKLLASSWPE-AKAQGPEQYSLACDVMDPESVKAMMARVSERFDGELDVLLHAVAYASAPAMNGPFIGTTAEDFAQAHLVSSHSLITLAREALPLLTDPKRDSEPTPSAIRARKRNSSILTLSYLGAQRAILPYKVMGPAKASLEATVRLLAAELGPPPNQVRVNAVGPGPIHTLSARGIPGFGEMCKEAAARAPLRRNADLEDVGGAAVFLASDAAKAITGQVLYVDGGLNVM 279
            +L GKR LVVGL N  SLA G  Q+  ++GA V+VSS      S  K  A   P+   A  P  +   CDV   ES+  +M R  + F GELD+L+H+VA+A   A     + T    +AQA  VS++SL+ L R A PL+   + ++           R+ S+L L+Y G+ + +  Y VMGPAKA+LEAT R LA ELG  P  +RVN + PGP++T+SARGIPG  +M K A   APLRRN+   DVG  A FL+SD A AITGQ +YVD GL+ M
Sbjct:    4 LLRGKRALVVGLMNKHSLAAGITQSLLSSGASVVVSSKTPLSESQIKSCAFEIPDTVDAPSPALHFEPCDVESDESIDQLMQRCGQIFSGELDILVHSVAFAPREAFTNGLLDTPRAAWAQALDVSAYSLVALTRAAKPLMASQEGEA-----------RDRSVLALTYAGSTKVVPNYNVMGPAKAALEATARQLAYELG--PEGIRVNCLSPGPMNTVSARGIPGISKMRKYAENHAPLRRNSSNGDVGSVATFLSSDLAAAITGQTIYVDSGLSAM 269
[Close]
BLAST of NO06G03900 vs. NCBI_GenBank
Match: XP_024572970.1 (short-chain dehydrogenase reductase sdr [Plasmopara halstedii] >CEG36601.1 short-chain dehydrogenase reductase sdr [Plasmopara halstedii])

HSP 1 Score: 208.4 bits (529), Expect = 2.900e-50
Identity = 127/278 (45.68%), Postives = 167/278 (60.07%), Query Frame = 0 
Query:    1 MLAGKRCLVVGLANHRSLAWGCAQAWRAAGAQVLVSSLPRFQPSIAKLLASSWPEAKAQGPEQYSLACDVMDPESVKAMMARVSERFDGELDVLLHAVAYASAPAMNGPFIGTTAEDFAQAHLVSSHSLITLAREALPLLTDPKRDSEPTPSAIRARKRNSSILTLSYLGAQRAILPYKVMGPAKASLEATVRLLAAELGPPPNQVRVNAVGPGPIHTLSARGIPGFGEMCKEAAARAPLRRNADLEDVGGAAVFLASDAAKAITGQVLYVDGGLNVM 279
            +L GKR LVVGL N  SLA   AQ+  + GA V+VSS      S AK      P++        S  CDV + ES+  +M R  + F+G LD+L+H+VA+A   A N   +GT+   + QA  VSS+SL+ L R A PL+              R  KRN S+L L+Y G+ + +  Y VMGPAKA+LEAT R LA ELG  P+ +RVN + PGPI+T+SARGIPG  +M   A   APLRRN+   DVG  A FL+SD A A++GQ ++VDGGL+ M
Sbjct:    2 LLQGKRALVVGLMNKHSLAVSVAQSLLSNGASVVVSSKIPLSESQAKSCGFQIPDSSCASLNFES--CDVENDESIDQLMQRCGKIFNGVLDILIHSVAFAPREAFNKGLLGTSRATWTQALDVSSYSLVALTRAAKPLMIFG-----------REEKRNCSVLALTYAGSTKVVPNYNVMGPAKAALEATARQLAYELG--PDGIRVNCLSPGPINTVSARGIPGISKMRTYAETHAPLRRNSSNSDVGSVAAFLSSDLAAAVSGQTIFVDGGLSAM 264
The following BLAST results are available for this feature:
BLAST of NO06G03900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26388.15.600e-11075.18short-chain dehydrogenase reductase sdr [Nannochlo... [more]
WP_015896172.11.200e-5145.85enoyl-ACP reductase [Acidobacterium capsulatum] >A... [more]
XP_002908557.11.500e-5146.40enoyl-[acyl-carrier-protein] reductase [NADH], put... [more]
ETM02265.15.900e-5145.52hypothetical protein L917_01235 [Phytophthora para... [more]
ETO84779.15.900e-5145.52hypothetical protein F444_01349 [Phytophthora para... [more]
XP_008891007.17.700e-5145.52hypothetical protein PPTG_01154 [Phytophthora para... [more]
ETP25845.17.700e-5145.52hypothetical protein F441_01326 [Phytophthora para... [more]
ETK95842.12.900e-5045.16hypothetical protein L915_01270 [Phytophthora para... [more]
ETL49220.12.900e-5045.16hypothetical protein L916_01256 [Phytophthora para... [more]
XP_024572970.12.900e-5045.68short-chain dehydrogenase reductase sdr [Plasmopar... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000088NSK000088Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03900.1NO06G03900.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100031g35gene4144Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03900.1NO06G03900.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03900 ID=NO06G03900|Name=NO06G03900|organism=Nannochloropsis oceanica|type=gene|length=837bp
ATGCTGGCGGGCAAGCGGTGTCTGGTGGTAGGCCTGGCCAACCACAGATC
CCTGGCGTGGGGATGCGCTCAAGCATGGCGAGCGGCAGGGGCTCAAGTCC
TGGTGAGCTCCCTTCCTCGATTCCAGCCTTCAATAGCCAAGCTCCTGGCG
TCCTCTTGGCCCGAAGCCAAGGCGCAGGGGCCGGAGCAATATAGCTTGGC
GTGCGACGTAATGGACCCCGAGAGCGTCAAGGCCATGATGGCACGAGTAT
CCGAACGCTTTGATGGTGAGCTGGACGTCTTGCTTCATGCCGTGGCGTAT
GCCTCAGCACCGGCTATGAACGGTCCTTTTATAGGGACCACGGCAGAAGA
CTTCGCCCAGGCTCATCTTGTGAGCTCTCATTCCTTGATCACTCTCGCCC
GGGAAGCCCTTCCACTCCTCACAGATCCCAAACGTGATTCCGAACCAACG
CCTTCAGCAATAAGAGCAAGAAAGAGGAACAGCAGCATCCTCACCCTCTC
CTACCTTGGTGCCCAACGCGCCATCCTCCCCTATAAAGTCATGGGACCCG
CCAAAGCCTCCCTCGAAGCCACCGTCCGTCTCTTGGCCGCTGAACTCGGC
CCTCCCCCTAATCAGGTACGCGTGAATGCCGTAGGTCCTGGACCGATTCA
CACGTTGTCTGCCAGGGGAATACCGGGCTTTGGGGAGATGTGTAAAGAGG
CTGCGGCACGAGCACCGTTGAGAAGAAATGCGGATTTGGAAGACGTAGGG
GGGGCGGCAGTATTTTTGGCGAGTGATGCAGCGAAGGCAATTACCGGGCA
GGTCTTGTATGTGGATGGGGGGTTGAACGTCATGTGA
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protein sequence of NO06G03900.1

>NO06G03900.1-protein ID=NO06G03900.1-protein|Name=NO06G03900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=279bp
MLAGKRCLVVGLANHRSLAWGCAQAWRAAGAQVLVSSLPRFQPSIAKLLA
SSWPEAKAQGPEQYSLACDVMDPESVKAMMARVSERFDGELDVLLHAVAY
ASAPAMNGPFIGTTAEDFAQAHLVSSHSLITLAREALPLLTDPKRDSEPT
PSAIRARKRNSSILTLSYLGAQRAILPYKVMGPAKASLEATVRLLAAELG
PPPNQVRVNAVGPGPIHTLSARGIPGFGEMCKEAAARAPLRRNADLEDVG
GAAVFLASDAAKAITGQVLYVDGGLNVM*
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Synonyms
Publications