NO06G03890, NO06G03890 (gene) Nannochloropsis oceanica

Overview
NameNO06G03890
Unique NameNO06G03890
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3286
Alignment locationchr6:1089318..1092603 -

Link to JBrowse

Properties
Property NameValue
DescriptionSuccinate-semialdehyde dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1089318..1092603 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR016161Ald_DH/histidinol_DH
IPR015590Aldehyde_DH_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Homology
[Close]
BLAST of NO06G03890 vs. NCBI_GenBank
Match: WP_029008121.1 (NADP-dependent succinate-semialdehyde dehydrogenase I [Azospirillum halopraeferens])

HSP 1 Score: 612.1 bits (1577), Expect = 1.800e-171
Identity = 309/487 (63.45%), Postives = 379/487 (77.82%), Query Frame = 0 
Query:   89 LDDPDLLRDQAYVNGQWVGSATGANTYEVKDPATHVVIAKVPSMGAADTRVAIDAAAAAWNGWRHKTGKERGDVLRRWHDLMQLHMTDLAKILTLENGKPLAESRGEIGYAASFVEFYAEEAKRTYGEMIPSPTPGRRLVTVKQPVGVAALISPWNFPSAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGVLNVVTCPRKHAADVGLELSTNRVVRKVSFTGSTAVGKILMRDCASTVKKLSLELGGNAPLLVFDDANLEHALNGVIVAKFRNAGQTCVSPNRLLVQAGIYEEFVTRLAERVSELHVGHGL-QPGAQVGPLINHAALQKVQDHVSDAVQKGAKLLTGGEVHALGGTFFEPTVLTNCKDDMSVFKEETFGPVCSVFRFESEEEGVRMANSTEFGLAAYVFTGEMGKGWRVAEGIEAGMVGVNEGMISTAVAPFGGVKESGLGREGARGGIDEYMETKYLCLGGIG 575
            L DP LLR +AYV+GQWV  A G  T  V DPA   VIA VP MGAA+TR AI AA  AW  WR +T KER  VLRRWHDLM  +  DLA+I+T E GKPLAE+RGEI YAASF+E++AEE KR YG+ IP+   G R++ +K+P+GV A I+PWNFP+AMITRKA PALAAGCP+VIKPA  TPLSA A+AELAERAGVP G+L+V+T     A  +G E++ N  VRK+SFTGST +GK LM  CA TVKK+SLELGGNAP +VFDDA+L+ A+ G + +K+RN GQTCV  NRLLVQAG+Y+ F  +LA  V+ L VG GL   GAQ GPLI+ AA++KV++H+ DA+ KGA+++TGG+ HALGGTFFEPTVL +    M V +EETFGPV  +FRFE+EEE VRMAN TEFGLAAY +  ++G+ WRVAE +E G+VG+NEG+IST VAPFGGVKESG+GREG+R GIDE++E KYLC+GGIG
Sbjct:   14 LRDPGLLRFRAYVDGQWV-DADGGGTIPVTDPADGTVIATVPDMGAAETRRAIAAAERAWPDWRARTAKERAAVLRRWHDLMMANQEDLARIMTAEQGKPLAEARGEIAYAASFLEWFAEEGKRVYGDTIPTHKAGTRILVLKEPIGVTAAITPWNFPAAMITRKAGPALAAGCPMVIKPATATPLSAFAMAELAERAGVPAGILSVLT---GSARAIGGEMTANPAVRKLSFTGSTEIGKQLMAQCAGTVKKMSLELGGNAPFIVFDDADLDAAVVGAMASKYRNTGQTCVCANRLLVQAGVYDAFAAKLAGAVAALKVGPGLTTDGAQQGPLIDAAAVEKVEEHIRDALDKGARVVTGGKRHALGGTFFEPTVLADVTTAMKVAREETFGPVAPLFRFETEEEAVRMANDTEFGLAAYFYARDLGRVWRVAERLEYGIVGINEGIISTEVAPFGGVKESGIGREGSRYGIDEFLEIKYLCMGGIG 496
[Close]
BLAST of NO06G03890 vs. NCBI_GenBank
Match: KJS38822.1 (succinate-semialdehyde dehydrogenase [Rhodospirillaceae bacterium BRH_c57])

HSP 1 Score: 610.9 bits (1574), Expect = 4.000e-171
Identity = 298/485 (61.44%), Postives = 382/485 (78.76%), Query Frame = 0 
Query:   89 LDDPDLLRDQAYVNGQWVGSATGANTYEVKDPATHVVIAKVPSMGAADTRVAIDAAAAAWNGWRHKTGKERGDVLRRWHDLMQLHMTDLAKILTLENGKPLAESRGEIGYAASFVEFYAEEAKRTYGEMIPSPTPGRRLVTVKQPVGVAALISPWNFPSAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGVLNVVTCPRKHAADVGLELSTNRVVRKVSFTGSTAVGKILMRDCASTVKKLSLELGGNAPLLVFDDANLEHALNGVIVAKFRNAGQTCVSPNRLLVQAGIYEEFVTRLAERVSELHVGHGLQPGAQVGPLINHAALQKVQDHVSDAVQKGAKLLTGGEVHALGGTFFEPTVLTNCKDDMSVFKEETFGPVCSVFRFESEEEGVRMANSTEFGLAAYVFTGEMGKGWRVAEGIEAGMVGVNEGMISTAVAPFGGVKESGLGREGARGGIDEYMETKYLCLGGI 574
            LD  DLLR QA+V+G W  +A+   T+EVK+PA   ++  VP MG AD R AI+AA AAW  WR KT KER ++LR W  L+  H  DLA+++T E GKPLAE+RGE+ Y ASF+E++AEEAKR YG++IPS  P +R+V +K+P+GV A I+PWNFP AMITRK APALAAGCPVVIKPAEDTPLSALALA LAE+AG P GVLNVVT  R + A+VG EL+ N +VRKVSFTGSTAVGK+LM+ CA TVKK+SLELGGNAP LVFDDA+L+ A+ G + +K+RNAGQTCV  NRL VQAG+Y+ F  +L + V+ L VG G   G   GPLIN AA+ KV+  ++DA  KGAK++TGG+ HALGGTFFEPT++T    DM++ +EE FGPV  ++RFE+E E + +AN+TEFGLAAY ++ ++G+ WRV+EG+E G+VG+NEG+IST VAPFGGVKESG+GREG++ G+++++E KYLC+GGI
Sbjct:   14 LDTLDLLRSQAFVDGAWCNAAS-HGTFEVKNPADGEILGSVPDMGTADARRAIEAANAAWPAWRKKTAKERANLLRAWFTLINQHGEDLARLMTAEQGKPLAEARGEVVYGASFIEWFAEEAKRVYGDVIPSHGPDKRIVVLKEPIGVVAAITPWNFPIAMITRKCAPALAAGCPVVIKPAEDTPLSALALAWLAEKAGFPAGVLNVVTTSRANTAEVGAELTGNPIVRKVSFTGSTAVGKLLMKQCADTVKKVSLELGGNAPFLVFDDADLDAAVAGAMASKYRNAGQTCVCANRLYVQAGVYDAFAEKLGKAVAGLKVGVGTDDGVTTGPLINEAAVAKVERLLADATGKGAKVVTGGKRHALGGTFFEPTIVTGVTQDMTMAREEIFGPVAPLYRFETEAEAIALANATEFGLAAYFYSRDIGRIWRVSEGLEYGIVGINEGIISTEVAPFGGVKESGIGREGSKYGMEDFLEIKYLCMGGI 497
[Close]
BLAST of NO06G03890 vs. NCBI_GenBank
Match: WP_040474268.1 (NAD-dependent succinate-semialdehyde dehydrogenase [Marinobacter algicola])

HSP 1 Score: 610.5 bits (1573), Expect = 5.200e-171
Identity = 295/485 (60.82%), Postives = 374/485 (77.11%), Query Frame = 0 
Query:   89 LDDPDLLRDQAYVNGQWVGSATGANTYEVKDPATHVVIAKVPSMGAADTRVAIDAAAAAWNGWRHKTGKERGDVLRRWHDLMQLHMTDLAKILTLENGKPLAESRGEIGYAASFVEFYAEEAKRTYGEMIPSPTPGRRLVTVKQPVGVAALISPWNFPSAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGVLNVVTCPRKHAADVGLELSTNRVVRKVSFTGSTAVGKILMRDCASTVKKLSLELGGNAPLLVFDDANLEHALNGVIVAKFRNAGQTCVSPNRLLVQAGIYEEFVTRLAERVSELHVGHGLQPGAQVGPLINHAALQKVQDHVSDAVQKGAKLLTGGEVHALGGTFFEPTVLTNCKDDMSVFKEETFGPVCSVFRFESEEEGVRMANSTEFGLAAYVFTGEMGKGWRVAEGIEAGMVGVNEGMISTAVAPFGGVKESGLGREGARGGIDEYMETKYLCLGGI 574
            L +P LLR+ AY+NG+WV + +G N   + +PA    +A VP M A DTR AI AA AAW  WR +  KER  VLRRW DL+  H  DLA ++T E GKPLAE+RGE+ Y ASF+E++AEEAKR YG++IP     +R+V +KQP+GV A I+PWNFP AMITRK APALAAGCPVV+KPAEDTPL ALALA LAE AGVPPG+LN+VTC +  A  VG E++T+ VVRKVSFTGST VGK+LMR  + TVKK+SLELGGNAP +VFDDA+L+ A+ G++ +K+RN GQTCV  NR+ VQ+G+Y+EFV +L   V +L VG GL+     GPLIN AAL KV+ H++DA ++GAK++ GG+ HALGGTFFEPT+LT+   DM V  EETFGPV  +FRFE+EE+ + MAN +EFGLAAY ++ ++ + W VAE +E GM+G+N+G+IST  APFGGVKESGLGREG+R G+DE+ME KYLCLGG+
Sbjct:    3 LTNPALLRESAYINGEWVQARSG-NRLSITNPANGEHLASVPDMDAEDTRQAIRAAEAAWPEWRARPAKERAGVLRRWFDLVMQHQEDLASLMTAEQGKPLAEARGEVAYGASFIEWFAEEAKRAYGDVIPGHGRDKRIVVIKQPIGVVAAITPWNFPVAMITRKVAPALAAGCPVVVKPAEDTPLCALALAALAEDAGVPPGILNIVTCSKDRAPQVGEEMTTSPVVRKVSFTGSTPVGKLLMRQASGTVKKVSLELGGNAPFIVFDDADLDAAVAGLMASKYRNTGQTCVCANRIYVQSGVYDEFVDKLKTAVGKLVVGPGLEGETHQGPLINQAALDKVRRHIADATERGAKVVMGGQAHALGGTFFEPTILTDVTQDMLVASEETFGPVAPLFRFETEEQAITMANDSEFGLAAYFYSNDIRRIWHVAEALETGMIGINDGIISTEAAPFGGVKESGLGREGSRYGLDEFMELKYLCLGGM 486
[Close]
BLAST of NO06G03890 vs. NCBI_GenBank
Match: EDM49256.1 (NAD-dependent aldehyde dehydrogenase [Marinobacter algicola DG893])

HSP 1 Score: 610.5 bits (1573), Expect = 5.200e-171
Identity = 295/485 (60.82%), Postives = 374/485 (77.11%), Query Frame = 0 
Query:   89 LDDPDLLRDQAYVNGQWVGSATGANTYEVKDPATHVVIAKVPSMGAADTRVAIDAAAAAWNGWRHKTGKERGDVLRRWHDLMQLHMTDLAKILTLENGKPLAESRGEIGYAASFVEFYAEEAKRTYGEMIPSPTPGRRLVTVKQPVGVAALISPWNFPSAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGVLNVVTCPRKHAADVGLELSTNRVVRKVSFTGSTAVGKILMRDCASTVKKLSLELGGNAPLLVFDDANLEHALNGVIVAKFRNAGQTCVSPNRLLVQAGIYEEFVTRLAERVSELHVGHGLQPGAQVGPLINHAALQKVQDHVSDAVQKGAKLLTGGEVHALGGTFFEPTVLTNCKDDMSVFKEETFGPVCSVFRFESEEEGVRMANSTEFGLAAYVFTGEMGKGWRVAEGIEAGMVGVNEGMISTAVAPFGGVKESGLGREGARGGIDEYMETKYLCLGGI 574
            L +P LLR+ AY+NG+WV + +G N   + +PA    +A VP M A DTR AI AA AAW  WR +  KER  VLRRW DL+  H  DLA ++T E GKPLAE+RGE+ Y ASF+E++AEEAKR YG++IP     +R+V +KQP+GV A I+PWNFP AMITRK APALAAGCPVV+KPAEDTPL ALALA LAE AGVPPG+LN+VTC +  A  VG E++T+ VVRKVSFTGST VGK+LMR  + TVKK+SLELGGNAP +VFDDA+L+ A+ G++ +K+RN GQTCV  NR+ VQ+G+Y+EFV +L   V +L VG GL+     GPLIN AAL KV+ H++DA ++GAK++ GG+ HALGGTFFEPT+LT+   DM V  EETFGPV  +FRFE+EE+ + MAN +EFGLAAY ++ ++ + W VAE +E GM+G+N+G+IST  APFGGVKESGLGREG+R G+DE+ME KYLCLGG+
Sbjct:    5 LTNPALLRESAYINGEWVQARSG-NRLSITNPANGEHLASVPDMDAEDTRQAIRAAEAAWPEWRARPAKERAGVLRRWFDLVMQHQEDLASLMTAEQGKPLAEARGEVAYGASFIEWFAEEAKRAYGDVIPGHGRDKRIVVIKQPIGVVAAITPWNFPVAMITRKVAPALAAGCPVVVKPAEDTPLCALALAALAEDAGVPPGILNIVTCSKDRAPQVGEEMTTSPVVRKVSFTGSTPVGKLLMRQASGTVKKVSLELGGNAPFIVFDDADLDAAVAGLMASKYRNTGQTCVCANRIYVQSGVYDEFVDKLKTAVGKLVVGPGLEGETHQGPLINQAALDKVRRHIADATERGAKVVMGGQAHALGGTFFEPTILTDVTQDMLVASEETFGPVAPLFRFETEEQAITMANDSEFGLAAYFYSNDIRRIWHVAEALETGMIGINDGIISTEAAPFGGVKESGLGREGSRYGLDEFMELKYLCLGGM 488
[Close]
BLAST of NO06G03890 vs. NCBI_GenBank
Match: WP_070971113.1 (NAD-dependent succinate-semialdehyde dehydrogenase [Marinobacter salinus] >AOY89119.1 succinate-semialdehyde dehydrogenase (NADP(+)) [Marinobacter salinus])

HSP 1 Score: 609.4 bits (1570), Expect = 1.200e-170
Identity = 293/485 (60.41%), Postives = 376/485 (77.53%), Query Frame = 0 
Query:   89 LDDPDLLRDQAYVNGQWVGSATGANTYEVKDPATHVVIAKVPSMGAADTRVAIDAAAAAWNGWRHKTGKERGDVLRRWHDLMQLHMTDLAKILTLENGKPLAESRGEIGYAASFVEFYAEEAKRTYGEMIPSPTPGRRLVTVKQPVGVAALISPWNFPSAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGVLNVVTCPRKHAADVGLELSTNRVVRKVSFTGSTAVGKILMRDCASTVKKLSLELGGNAPLLVFDDANLEHALNGVIVAKFRNAGQTCVSPNRLLVQAGIYEEFVTRLAERVSELHVGHGLQPGAQVGPLINHAALQKVQDHVSDAVQKGAKLLTGGEVHALGGTFFEPTVLTNCKDDMSVFKEETFGPVCSVFRFESEEEGVRMANSTEFGLAAYVFTGEMGKGWRVAEGIEAGMVGVNEGMISTAVAPFGGVKESGLGREGARGGIDEYMETKYLCLGGI 574
            L +P+LLRD+AY+NGQW  + +G  T+EV +PA    +  VP M   DTR+AI+AA AAW  WR    KER ++L++W +L+  +  DLA+++T E GKPLAESRGE+GY ASF+E++AEEAKR YG++IP     +R+V +KQPVGV A I+PWNFP AMITRK APALAAGCPVVIKPAEDTPLSALA+  LAE+AGVP G++NV+TC + +A  VG EL+ N +VRKVSFTGST VGK+LMR  + TVKK+SLELGGNAP +VFDDA+L+ A+ G++ +K+RN GQTCV  NR+ VQ+G+Y+ FV +L   VS++ VG GL+     GPLIN AAL KV+ H++DA  KGAK+  GG+ HALGGTFFEPT+LT    DM +  EETFGPV  +FRFE+EE+ + MAN +EFGL+AY ++  + + W VAE +E+GM+GVNEG+IST VAPFGGVKESGLGREG+  G+DEYME KYLCLGG+
Sbjct:    5 LKNPELLRDRAYINGQWTTAGSG-KTFEVTNPANGEHLVSVPDMDDTDTRIAIEAAEAAWPAWRSTPAKERANILKKWFNLLMENQEDLARLMTAEQGKPLAESRGEVGYGASFIEWFAEEAKRAYGDVIPGHGKDKRIVVIKQPVGVVAAITPWNFPIAMITRKVAPALAAGCPVVIKPAEDTPLSALAITALAEQAGVPAGLVNVITCSKPNAVAVGGELTGNPIVRKVSFTGSTPVGKLLMRQASDTVKKVSLELGGNAPFIVFDDADLDAAVAGLMASKYRNTGQTCVCANRVYVQSGVYDAFVEKLKAAVSKMVVGAGLEGETHQGPLINQAALDKVKRHIADATAKGAKVALGGQAHALGGTFFEPTILTGATQDMLIASEETFGPVAPLFRFETEEDAIAMANDSEFGLSAYFYSTNIHRVWHVAEALESGMIGVNEGIISTEVAPFGGVKESGLGREGSHYGLDEYMELKYLCLGGM 488
[Close]
BLAST of NO06G03890 vs. NCBI_GenBank
Match: WP_069185034.1 (NAD-dependent succinate-semialdehyde dehydrogenase [Marinobacter adhaerens] >ODM28603.1 succinate-semialdehyde dehydrogenase (NADP(+)) [Marinobacter adhaerens])

HSP 1 Score: 609.0 bits (1569), Expect = 1.500e-170
Identity = 293/485 (60.41%), Postives = 376/485 (77.53%), Query Frame = 0 
Query:   89 LDDPDLLRDQAYVNGQWVGSATGANTYEVKDPATHVVIAKVPSMGAADTRVAIDAAAAAWNGWRHKTGKERGDVLRRWHDLMQLHMTDLAKILTLENGKPLAESRGEIGYAASFVEFYAEEAKRTYGEMIPSPTPGRRLVTVKQPVGVAALISPWNFPSAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGVLNVVTCPRKHAADVGLELSTNRVVRKVSFTGSTAVGKILMRDCASTVKKLSLELGGNAPLLVFDDANLEHALNGVIVAKFRNAGQTCVSPNRLLVQAGIYEEFVTRLAERVSELHVGHGLQPGAQVGPLINHAALQKVQDHVSDAVQKGAKLLTGGEVHALGGTFFEPTVLTNCKDDMSVFKEETFGPVCSVFRFESEEEGVRMANSTEFGLAAYVFTGEMGKGWRVAEGIEAGMVGVNEGMISTAVAPFGGVKESGLGREGARGGIDEYMETKYLCLGGI 574
            L +  LLR+QAY+NGQW+ + +G  T+ V +PA    +A VP M   DTR AI+AA AAW  WR    KER  +LR+W DL+  +  DLA+++T E GKPLAESRGE+GY ASF+E++AEEAKR YG++IP     +R+V +KQPVGV A I+PWNFP AMITRK APALAAGCPVV+KPAEDTPLSALA+  LAE AGVPPG++N+VTC + +A  VG EL+ N +VRKVSFTGST VGK+LMR  + +VKK+SLELGGNAP +VFDDA+L+ A+ G++ +K+RN GQTCV  NR+ VQAG+Y+ F  +L   VS++ VG GL+   Q GPLIN AAL KV+ H+ DA  KGAK+  GG+ HALGGTFF+PT+LT+   DM + +EETFGPV  +FRFE+++E + MAN +EFGL+AY ++ ++ + WRVAE +E+GM+GVNEG+IST VAPFGGVKESGLGREG+  G+DEYME KYLCLGG+
Sbjct:    5 LTNRGLLREQAYINGQWIMAKSG-KTFAVTNPANGDQLATVPDMDDTDTRAAIEAAEAAWPAWRSTPAKERAGILRKWFDLLMANQEDLARLMTAEQGKPLAESRGEVGYGASFIEWFAEEAKRAYGDVIPGHAKDKRIVVIKQPVGVVAAITPWNFPIAMITRKVAPALAAGCPVVVKPAEDTPLSALAITALAEEAGVPPGLINIVTCSKPNAVAVGGELTGNPIVRKVSFTGSTPVGKLLMRQASESVKKVSLELGGNAPFIVFDDADLDAAVAGLMASKYRNTGQTCVCANRVYVQAGVYDAFTEKLKAAVSKMVVGPGLEGETQQGPLINDAALNKVKRHIEDATSKGAKVALGGQPHALGGTFFQPTILTHATQDMLIAREETFGPVAPLFRFETDDEAISMANDSEFGLSAYFYSRDIHRVWRVAEELESGMIGVNEGIISTEVAPFGGVKESGLGREGSHYGLDEYMELKYLCLGGM 488
[Close]
BLAST of NO06G03890 vs. NCBI_GenBank
Match: WP_088826141.1 (NAD-dependent succinate-semialdehyde dehydrogenase [Marinobacter sp. es.048] >SNC59859.1 succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [Marinobacter sp. es.048])

HSP 1 Score: 609.0 bits (1569), Expect = 1.500e-170
Identity = 294/485 (60.62%), Postives = 378/485 (77.94%), Query Frame = 0 
Query:   89 LDDPDLLRDQAYVNGQWVGSATGANTYEVKDPATHVVIAKVPSMGAADTRVAIDAAAAAWNGWRHKTGKERGDVLRRWHDLMQLHMTDLAKILTLENGKPLAESRGEIGYAASFVEFYAEEAKRTYGEMIPSPTPGRRLVTVKQPVGVAALISPWNFPSAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGVLNVVTCPRKHAADVGLELSTNRVVRKVSFTGSTAVGKILMRDCASTVKKLSLELGGNAPLLVFDDANLEHALNGVIVAKFRNAGQTCVSPNRLLVQAGIYEEFVTRLAERVSELHVGHGLQPGAQVGPLINHAALQKVQDHVSDAVQKGAKLLTGGEVHALGGTFFEPTVLTNCKDDMSVFKEETFGPVCSVFRFESEEEGVRMANSTEFGLAAYVFTGEMGKGWRVAEGIEAGMVGVNEGMISTAVAPFGGVKESGLGREGARGGIDEYMETKYLCLGGI 574
            L +P+LLR+ AY+NG+WV + +G N   V +PA    +A VP MG  DTR AI  A AA   WR +  KER  +LRRW DL+  +  DLA+++T E GKPLAE+RGE+GY ASFVE+++EEAKR YG++IP     +R+V +KQP+GV A I+PWNFP AMITRK APALAAGCPVV+KPAEDTPL ALALA LAE AGVPPGV+N+VTC +  A +VG EL+TN V+RKVSFTGST VGK+LMR  + TVKK+SLELGGNAP +VFDDA+L+ A+ G++ +K+RN GQTCV  NR+ VQ+G+Y++FV +L E VS++ VG GL+     GPLIN AAL KV+ H++DA  KGAK+  GG+VHALGGTFFEPT+LT+   DM V  EETFGPV  +FRF++EE+ + M+N++EFGLAAY ++ ++ + W VAE +E GM+G+N+G+IST  APFGGVKESGLGREG+R G+DE+ME KYLCLGG+
Sbjct:    5 LTNPELLREGAYINGEWVQARSG-NVLPVTNPANGEHLANVPDMGVDDTRQAIQLAEAAGPEWRARPAKERAGILRRWFDLVMQNQEDLARLMTAEQGKPLAEARGEVGYGASFVEWFSEEAKRAYGDVIPGHGRDKRIVVIKQPIGVVAAITPWNFPVAMITRKVAPALAAGCPVVVKPAEDTPLCALALAVLAEEAGVPPGVINIVTCSKGRAPEVGEELTTNPVIRKVSFTGSTPVGKMLMRQASGTVKKVSLELGGNAPFIVFDDADLDAAVTGLMASKYRNTGQTCVCANRIYVQSGVYDQFVEKLKEAVSKMVVGAGLEGETHQGPLINQAALDKVRRHIADATGKGAKVALGGQVHALGGTFFEPTILTDVTQDMLVASEETFGPVAPLFRFDTEEQAIAMSNNSEFGLAAYFYSNDIRRIWHVAEALETGMIGINDGIISTEAAPFGGVKESGLGREGSRYGLDEFMELKYLCLGGM 488
[Close]
BLAST of NO06G03890 vs. NCBI_GenBank
Match: AFP29320.1 (Succinate-semialdehyde dehydrogenase [NADP+] GabD [Marinobacter sp. BSs20148])

HSP 1 Score: 608.6 bits (1568), Expect = 2.000e-170
Identity = 292/485 (60.21%), Postives = 377/485 (77.73%), Query Frame = 0 
Query:   89 LDDPDLLRDQAYVNGQWVGSATGANTYEVKDPATHVVIAKVPSMGAADTRVAIDAAAAAWNGWRHKTGKERGDVLRRWHDLMQLHMTDLAKILTLENGKPLAESRGEIGYAASFVEFYAEEAKRTYGEMIPSPTPGRRLVTVKQPVGVAALISPWNFPSAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGVLNVVTCPRKHAADVGLELSTNRVVRKVSFTGSTAVGKILMRDCASTVKKLSLELGGNAPLLVFDDANLEHALNGVIVAKFRNAGQTCVSPNRLLVQAGIYEEFVTRLAERVSELHVGHGLQPGAQVGPLINHAALQKVQDHVSDAVQKGAKLLTGGEVHALGGTFFEPTVLTNCKDDMSVFKEETFGPVCSVFRFESEEEGVRMANSTEFGLAAYVFTGEMGKGWRVAEGIEAGMVGVNEGMISTAVAPFGGVKESGLGREGARGGIDEYMETKYLCLGGI 574
            L +P+LLR++AY+NGQW  + +G  T+EV +PA    +A VP M   DTR+AI++A AAW  WR    KER  +LR+W +L+  +  DLA+++T E GKPLAESRGE+GY ASF+E++AEEAKR YG++IPS    +R++ +KQPVGV A I+PWNFP AMITRK APALAAGCPVV+KPAEDTPLSALA+  LAE+AGVP G++N+VTC + +AA VG EL+ N VVRK+SFTGST VGK+LMR  + TVKK+SLELGGNAP +VFDDA+L+ A+ G++ +K+RN GQTCV  NR+ VQ+G+Y+ F  +L   VS++ VG GL    Q GPLIN AAL KV+ H++DA  KGAK++ GG+ HALGGTFFEPT+L +   DM +  EETFGPV  +FRFE+EEE + MAN + FGL+AY ++  + + W VAE +E+GMVG+NEG+IST VAPFGGVKESGLGREG+  G+DEYME KYLCLGG+
Sbjct:    5 LKNPELLRNRAYINGQWTAARSG-KTFEVTNPANGEHLATVPDMDETDTRIAIESAEAAWPAWRSTPAKERAKILRKWFELLMENQEDLARLMTAEQGKPLAESRGEVGYGASFIEWFAEEAKRAYGDVIPSHGKDKRILVIKQPVGVVAAITPWNFPIAMITRKVAPALAAGCPVVVKPAEDTPLSALAITALAEQAGVPAGLINIVTCSKPNAAAVGGELTGNPVVRKISFTGSTPVGKLLMRQASDTVKKVSLELGGNAPFIVFDDADLDAAVIGLMASKYRNTGQTCVCANRVYVQSGVYDAFAEKLKVAVSKMVVGAGLDGDTQQGPLINKAALDKVKRHIADATSKGAKIILGGQPHALGGTFFEPTILIDATQDMLIASEETFGPVAPLFRFETEEEAIAMANDSAFGLSAYFYSNNIHRVWHVAEALESGMVGINEGIISTEVAPFGGVKESGLGREGSHYGLDEYMELKYLCLGGM 488
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BLAST of NO06G03890 vs. NCBI_GenBank
Match: WP_009869208.1 (NAD-dependent succinate-semialdehyde dehydrogenase [Magnetospirillum magnetotacticum] >KIL97994.1 Aldehyde dehydrogenase B [Magnetospirillum magnetotacticum MS-1])

HSP 1 Score: 608.6 bits (1568), Expect = 2.000e-170
Identity = 299/485 (61.65%), Postives = 378/485 (77.94%), Query Frame = 0 
Query:   89 LDDPDLLRDQAYVNGQWVGSATGANTYEVKDPATHVVIAKVPSMGAADTRVAIDAAAAAWNGWRHKTGKERGDVLRRWHDLMQLHMTDLAKILTLENGKPLAESRGEIGYAASFVEFYAEEAKRTYGEMIPSPTPGRRLVTVKQPVGVAALISPWNFPSAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGVLNVVTCPRKHAADVGLELSTNRVVRKVSFTGSTAVGKILMRDCASTVKKLSLELGGNAPLLVFDDANLEHALNGVIVAKFRNAGQTCVSPNRLLVQAGIYEEFVTRLAERVSELHVGHGLQPGAQVGPLINHAALQKVQDHVSDAVQKGAKLLTGGEVHALGGTFFEPTVLTNCKDDMSVFKEETFGPVCSVFRFESEEEGVRMANSTEFGLAAYVFTGEMGKGWRVAEGIEAGMVGVNEGMISTAVAPFGGVKESGLGREGARGGIDEYMETKYLCLGGI 574
            L D  LL+ +A+VNG W  +  GA T++V +PAT  ++A VP MGAA+ R AI+AA AAW  W+ KTGKERG +LR W +L+  H  DLA +LT E GKPLAE+RGEI Y ASF+E++AEEAKR YG+ IP   P +R+V VK+P+GV A I+PWNFP+AMITRK APALA GCPVV+KPAEDTPLSALALAELA RAG+P G+ N+VT   +H A VG ELS N +VRK+SFTGST VGK+LM  CA+TVKK+SLELGGNAP +VFDDA+L+ A+ G + +K+RNAGQTCV  NR+LVQ G+Y+EF  RLA+ VS+L VG GL   A  GPLIN  A++KV+  ++DAV KGA ++ GG+ HALG TFFEPT++TN    MS+ +EE FGPV  +FRF++E E + MAN TEFGLAAY + G + + WRVAE +E GMVG+N+G+IST VAPFGGVKESG+GREG++ GI++++E KYLCLGGI
Sbjct:    3 LKDSSLLKSRAFVNGAWTDADNGA-TFDVLNPATGEILASVPDMGAAEARRAIEAANAAWPAWKAKTGKERGAILRNWFNLIMAHQEDLAVLLTAEQGKPLAEARGEIAYGASFIEWFAEEAKRVYGDTIPGHAPDKRIVVVKEPIGVVAAITPWNFPNAMITRKCAPALAVGCPVVVKPAEDTPLSALALAELAVRAGIPAGIFNIVTA--RHGALVGGELSGNPLVRKLSFTGSTQVGKLLMSQCAATVKKVSLELGGNAPFIVFDDADLDAAVAGAMASKYRNAGQTCVCANRMLVQDGVYDEFARRLAKAVSQLKVGDGLASDANQGPLINAKAVEKVERMLADAVSKGATIVCGGKRHALGRTFFEPTIVTNVTSTMSMAREEIFGPVAPLFRFKTEAEAIAMANDTEFGLAAYFYAGNIARVWRVAEKLEYGMVGINDGIISTEVAPFGGVKESGIGREGSKYGIEDFLEIKYLCLGGI 484
[Close]
BLAST of NO06G03890 vs. NCBI_GenBank
Match: WP_041635435.1 (NAD-dependent succinate-semialdehyde dehydrogenase [Marinobacter sp. BSs20148])

HSP 1 Score: 608.6 bits (1568), Expect = 2.000e-170
Identity = 292/485 (60.21%), Postives = 377/485 (77.73%), Query Frame = 0 
Query:   89 LDDPDLLRDQAYVNGQWVGSATGANTYEVKDPATHVVIAKVPSMGAADTRVAIDAAAAAWNGWRHKTGKERGDVLRRWHDLMQLHMTDLAKILTLENGKPLAESRGEIGYAASFVEFYAEEAKRTYGEMIPSPTPGRRLVTVKQPVGVAALISPWNFPSAMITRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGVLNVVTCPRKHAADVGLELSTNRVVRKVSFTGSTAVGKILMRDCASTVKKLSLELGGNAPLLVFDDANLEHALNGVIVAKFRNAGQTCVSPNRLLVQAGIYEEFVTRLAERVSELHVGHGLQPGAQVGPLINHAALQKVQDHVSDAVQKGAKLLTGGEVHALGGTFFEPTVLTNCKDDMSVFKEETFGPVCSVFRFESEEEGVRMANSTEFGLAAYVFTGEMGKGWRVAEGIEAGMVGVNEGMISTAVAPFGGVKESGLGREGARGGIDEYMETKYLCLGGI 574
            L +P+LLR++AY+NGQW  + +G  T+EV +PA    +A VP M   DTR+AI++A AAW  WR    KER  +LR+W +L+  +  DLA+++T E GKPLAESRGE+GY ASF+E++AEEAKR YG++IPS    +R++ +KQPVGV A I+PWNFP AMITRK APALAAGCPVV+KPAEDTPLSALA+  LAE+AGVP G++N+VTC + +AA VG EL+ N VVRK+SFTGST VGK+LMR  + TVKK+SLELGGNAP +VFDDA+L+ A+ G++ +K+RN GQTCV  NR+ VQ+G+Y+ F  +L   VS++ VG GL    Q GPLIN AAL KV+ H++DA  KGAK++ GG+ HALGGTFFEPT+L +   DM +  EETFGPV  +FRFE+EEE + MAN + FGL+AY ++  + + W VAE +E+GMVG+NEG+IST VAPFGGVKESGLGREG+  G+DEYME KYLCLGG+
Sbjct:    3 LKNPELLRNRAYINGQWTAARSG-KTFEVTNPANGEHLATVPDMDETDTRIAIESAEAAWPAWRSTPAKERAKILRKWFELLMENQEDLARLMTAEQGKPLAESRGEVGYGASFIEWFAEEAKRAYGDVIPSHGKDKRILVIKQPVGVVAAITPWNFPIAMITRKVAPALAAGCPVVVKPAEDTPLSALAITALAEQAGVPAGLINIVTCSKPNAAAVGGELTGNPVVRKISFTGSTPVGKLLMRQASDTVKKVSLELGGNAPFIVFDDADLDAAVIGLMASKYRNTGQTCVCANRVYVQSGVYDAFAEKLKVAVSKMVVGAGLDGDTQQGPLINKAALDKVKRHIADATSKGAKIILGGQPHALGGTFFEPTILIDATQDMLIASEETFGPVAPLFRFETEEEAIAMANDSAFGLSAYFYSNNIHRVWHVAEALESGMVGINEGIISTEVAPFGGVKESGLGREGSHYGLDEYMELKYLCLGGM 486
The following BLAST results are available for this feature:
BLAST of NO06G03890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_029008121.11.800e-17163.45NADP-dependent succinate-semialdehyde dehydrogenas... [more]
KJS38822.14.000e-17161.44succinate-semialdehyde dehydrogenase [Rhodospirill... [more]
WP_040474268.15.200e-17160.82NAD-dependent succinate-semialdehyde dehydrogenase... [more]
EDM49256.15.200e-17160.82NAD-dependent aldehyde dehydrogenase [Marinobacter... [more]
WP_070971113.11.200e-17060.41NAD-dependent succinate-semialdehyde dehydrogenase... [more]
WP_069185034.11.500e-17060.41NAD-dependent succinate-semialdehyde dehydrogenase... [more]
WP_088826141.11.500e-17060.62NAD-dependent succinate-semialdehyde dehydrogenase... [more]
AFP29320.12.000e-17060.21Succinate-semialdehyde dehydrogenase [NADP+] GabD ... [more]
WP_009869208.12.000e-17061.65NAD-dependent succinate-semialdehyde dehydrogenase... [more]
WP_041635435.12.000e-17060.21NAD-dependent succinate-semialdehyde dehydrogenase... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000089NSK000089Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03890.1NO06G03890.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672574gene_6719Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100031g34gene4145Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03890.1NO06G03890.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03890 ID=NO06G03890|Name=NO06G03890|organism=Nannochloropsis oceanica|type=gene|length=3286bp
CTTTTTATTTCACAGAATCTTGATTTGCTTTACTATCATCCCGTCTTGCC
ATCTACACCCCTCCCTCCCTCATTCTCCCCCTCCTTTCCCCCGCTCAATC
AAAGCATAATCACATGACGTTCAACCCCCCATCCACATACAAGACCTGCC
CGGTAATTGCCTTCGCTGCATCACTCGCCAAAAATACTGCCGCCCCCCCT
ACGTCTTCCAAATCCGCATTTCTTCTCAACGGTGCTCGTGCCGCAGCCTC
TTTACACATCTCCCCAAAGCCCGGTATTCCCCTGGCAGACAACGTGTGAA
TCGGTCCAGGACCTACGGCATTCACGCGTACCTGATTAGGGGGAGGGCCG
AGTTCAGCGGCCAAGAGACGGACGGTGGCTTCGAGGGAGGCTTTGGCGGG
TCCCATGACTTTATAGGGGAGGATGGCGCGTTGGGCACCAAGGTAGGAGA
GGGTGAGGATGCTGCTGTTCCTCTTTCTTGCTCTTATTGCTGAAGGCGTT
GGTTCGGAATCACGTTTGGGATCTGTGAGGAGTGGAAGGGCTTCCCGGGC
GAGAGTGATCAAGGAATGAGAGCTCACAAGATGAGCCTGGGCGAAGTCTT
CTGCCGTGGTCCCTATAAAAGGACCGTTCATAGCCGGTGCTGAGGCATAC
GCCACGGCATGAAGCAAGACGTCCAGCTCACCATCAAAGCGTTCGGATAC
TCGTGCCATCATGGCCTTGACGCTCTCGGGGTCCATTACGTCGCACGCCA
AGCTATATTGCTCCGGCCCCTGCGCCTTGGCTTCGGGCCAAGAGGACGCC
AGGAGCTTGGCTATTGAAGGCTGGAATCGAGGAAGGGAGCTCACCAGGAC
TTGAGCCCCTGCCGCTCGCCATGCTTGAGCGCATCCCCACGCCAGGGATC
TGTGGTTGGCCAGGCCTACCACCAGACACCGCTTGCCCGCCAGCATTACG
TTACTGGTGATGGAGAGAGTGAAGTGCAAGGATGATTGGTGGAGAGATTA
ACCTTGCTATTGCGACTACCAGCCGCAGGGGGGGGCTGCTGGTGGTGGTT
CTCCCGTTGCTGGTGCTGCCTGCAGCTGCCTGTGCCAGTGGTTTGTGTAT
TTAAGGGTAGGCAGCGAGTAGCAAGACGGGGTTGAAGCATGGCGCGGCGG
CTTTCTTCTTTCTCCCTGTTCTGCGCGTCACCAAAGTCTCACTATGGTCA
ACCATTTACACACCCACCCTACCTACCGTATCACTTTATGCAATAGAGCT
ACATGTACCGTCACGTCGGTCGACGTTTTGCAGCTTCCACCTTTATCTCT
TCCTCGTCTCGGACCGCTGACGCCCGCACTTGCCTCCCCCACTCCCCCTC
CCTCCCCCGTCTTCCCATGCTCCTCGCGGCCGCCGCTGCCTCGGCCACCA
TGCACACTACGCGACTTCCTTCCCCGCGTGCACGGGAGATGACCACAAAT
AGCTCGGCCACAGCCCATGCCGCGCACAAGGCCCACGCCGCCTCGGCCGA
GAGTGCGAGCGAGTTTCTGGACGACCCAGACCTGCTTCGAGACCAAGCCT
ACGTGAATGGGCAATGGGTGGGCAGCGCCACGGGTGCGAACACGTACGAA
GTCAAAGACCCGGCTACACACGTTGTCATTGCCAAAGTCCCCTCCATGGG
GGCGGCCGACACGCGGGTTGCCATCGACGCGGCCGCCGCGGCCTGGAACG
GGTGGCGACACAAGACAGGCAAAGAACGAGGAGATGTGCTCCGACGGTGG
CATGATCTGATGCAGCTCCACATGACAGACCTGGCCAAAATTCTAACATT
AGAAAATGGAAAGCCCTTAGCGGAATCTCGGGGCGAGATTGGGTATGCGG
CGAGTTTTGTCGAGTTTTATGCCGAGGAAGCCAAGCGGACATATGGTGAA
ATGATCCCTTCCCCTACCCCTGGTCGACGGCTCGTAACCGTCAAGCAACC
GGTCGGTGTGGCCGCCCTCATTTCCCCCTGGAACTTTCCCAGTGCCATGA
TCACACGCAAGGCCGCCCCTGCCCTCGCGGCGGGCTGTCCGGTGGTCATT
AAGCCTGCTGAGGACACGCCTTTATCTGCCTTGGCCTTGGCAGAGCTCGC
TGAACGTGCCGGCGTCCCTCCAGGGGTCCTGAACGTGGTCACCTGCCCGA
GAAAGCATGCAGCAGACGTGGGGCTTGAATTAAGCACCAACAGGGTCGTG
CGTAAGGTGTCCTTCACGGGTTCCACGGCGGTGGGAAAGATCTTGATGAG
GGACTGCGCGTCGACCGTGAAGAAGCTTTCGCTTGAATTGGGGGGGAATG
CCCCGTTGCTTGTGTTTGATGATGCGAACCTCGAACACGCCTTGAATGGT
GTGATAGTAGCCAAGTTCCGCAATGCGGGCCAGACGTGCGTGTCTCCCAA
CCGACTGTTGGTCCAGGCGGGGATTTATGAGGAGTTCGTCACGCGCCTGG
CGGAGCGGGTGTCGGAATTGCACGTTGGGCATGGGCTGCAGCCGGGTGCA
CAGgtaaggaggccatgatcttcgaggattattggtttccgggtcaccac
cttgttcccccctccattttcttcattcttttcacgggcgatttttgggg
tccctggttaacgtccttcctctgtttctttccatccgttgcttgccgtc
accgcgctagctgctagatcaacttcaagtcccctccctccctccctcac
ttcctccctcccctcctcccctcctcctctcctcccctcagGTCGGCCCC
TTGATCAACCACGCGGCGCTTCAAAAGGTTCAAGATCACGTGAGCGACGC
GGTGCAAAAAGGCGCAAAACTTCTGACTGGGGGAGAGGTCCACGCGTTGG
GAGGCACGTTTTTTGAGCCCACGGTATTGACAAATTGTAAGGATGATATG
TCGGTGTTTAAAGAAGAGACCTTTGGCCCTGTCTGTTCTGTGTTCCGTTT
TGAGAGTGAGGAGGAGGGGGTCAGGATGGCCAACAGCACGGAATTTGGCT
TAGCCGCCTATGTGTTTACAGGGGAGATGGGTAAAGGGTGGAGGGTGGCA
GAGGGGATCGAGGCGGGTATGGTCGGAGTGAATGAGGGCATGATCTCGAC
GGCGGTGGCGCCGTTTGGAGGGGTGAAAGAAAGCGGGCTGGGGAGGGAGG
GAGCGAGGGGCGGGATTGACGAGTATATGGAGACGAAGTATCTGTGTCTG
GGCGGGATTGGATAGAGGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGGG
GTGCGGAGGGAAAGAGGAGACCATGGCAGACAAGTG
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protein sequence of NO06G03890.1

>NO06G03890.1-protein ID=NO06G03890.1-protein|Name=NO06G03890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=575bp
MYRHVGRRFAASTFISSSSRTADARTCLPHSPSLPRLPMLLAAAAASATM
HTTRLPSPRAREMTTNSSATAHAAHKAHAASAESASEFLDDPDLLRDQAY
VNGQWVGSATGANTYEVKDPATHVVIAKVPSMGAADTRVAIDAAAAAWNG
WRHKTGKERGDVLRRWHDLMQLHMTDLAKILTLENGKPLAESRGEIGYAA
SFVEFYAEEAKRTYGEMIPSPTPGRRLVTVKQPVGVAALISPWNFPSAMI
TRKAAPALAAGCPVVIKPAEDTPLSALALAELAERAGVPPGVLNVVTCPR
KHAADVGLELSTNRVVRKVSFTGSTAVGKILMRDCASTVKKLSLELGGNA
PLLVFDDANLEHALNGVIVAKFRNAGQTCVSPNRLLVQAGIYEEFVTRLA
ERVSELHVGHGLQPGAQVGPLINHAALQKVQDHVSDAVQKGAKLLTGGEV
HALGGTFFEPTVLTNCKDDMSVFKEETFGPVCSVFRFESEEEGVRMANST
EFGLAAYVFTGEMGKGWRVAEGIEAGMVGVNEGMISTAVAPFGGVKESGL
GREGARGGIDEYMETKYLCLGGIG*
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Synonyms
Publications