NO06G03820, NO06G03820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03820 vs. NCBI_GenBank
Match: EWM26360.1 (atp-dependent rna helicase ddx55 [Nannochloropsis gaditana]) HSP 1 Score: 865.5 bits (2235), Expect = 1.200e-247 Identity = 451/611 (73.81%), Postives = 493/611 (80.69%), Query Frame = 0 Query: 19 HPLSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLLIGGTDVVGDNFNRFSQDGADILVATPGRLHDVLERYAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALG-----GGGREGESG---GSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEK 622 H L+FQA+ P+LH LAA+ AL FTQMTPVQAST+PLFLTNKDVCVEAVTGSGKTLAF++PAVEMILRR+ LKKHEVGAIIISPTRELAKQI KV THFCSH GLR PLLL+GGTD+VGDNF RFSQDGADILV TPGRLHDVLERY H +RELEVLILDEADTLLNMGFKATLTAIL HLPKQRRTGLFSATQTREVR+LARAG+RNPATVAVQVVNQ+T+EVQATPQTL NF+WTC +PEEKLGRLLAFL++H++ KVMVFFITCAAVDYFA ILTQHP F++ LG G G++ + G GS VA LHGKMVQKKRDGML RFT AA GG VLLCTDVAARGLDVPDVDWI+QYEPPQDPSFFIHRVGRTARAGR+G+SLTFLLEAE PYVEFLRLK VPLA LEE+EV LP DP G V+EGVK LA++DREVLE+GT+A+TAFVRAYKEHQCQFIFRF QLDL LARAY LLRLPKMPEL+HHPI V F++W+TDTR IEY+DKKREAAR QQI+EEWEELGREERLFKRLR KISREEYEK Sbjct: 13 HRLAFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDIVGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQTREVQATPQTLLNFHWTCARPEEKLGRLLAFLSRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVEGVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWATDTRSIEYQDKKREAAR-KMRLAEAARERDRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEK 622
BLAST of NO06G03820 vs. NCBI_GenBank
Match: XP_002290486.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED92238.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 479.2 bits (1232), Expect = 2.300e-131 Identity = 279/609 (45.81%), Postives = 380/609 (62.40%), Query Frame = 0 Query: 23 FQALKPALHANMLAAI--GALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLLIGGTDV--VGDNFNRFSQDGADILVATPGRLHDVLERYAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVREL-ARAGLRNPATVAVQV---VNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTD--TRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEK 622 F ++ P L ++L + F TPVQ++T+PLFLT+ DV V AVTGSGKTLAF++P VEMILRR LK H+VGA+++ PTRELA+Q F V C G+ PLLL+GG V V + +F + +DI++ TPGR+ DVL R+ ++ D+ ELEVLILDE+D LL+MGF+ TLT+IL LP+ RRTGLFSAT T V++L ++G+RNP V V V V + QATP +L+N+Y +EKL RLL+FLT+H +KV+VFF+TCA V+Y++S+L + + K G ALHGK+VQK+R+ + RF G+ LLCTDVAARGLD+ DV W IQ++ P DPS ++HRVGR+ARAGR+GKSL FL E YV+FLRL+ VP+ +LE++EV+ S+ VL ++ L +KDR+VLE+GTKAYT+++RAYKEH C FIFRF LDL LA +++LLRLPKMPEL K+ F+ + I + DK REAAR +I +EW+EL +EERL+K+LR +KI++EEY++ Sbjct: 1 FTSINPPLSPSILTFLTKPPYNFPTPTPVQSTTIPLFLTHHDVFVRAVTGSGKTLAFLIPVVEMILRRTVLLKGHQVGALVLEPTRELARQTFSVCRDLCGECGMNEPLLLVGGASVSAVAHDLQQFQKLKSDIVIGTPGRVEDVLTRFDNI-DVSELEVLILDESDVLLDMGFEVTLTSILSRLPRMRRTGLFSATNTSGVKKLCVKSGMRNPVVVDVAVSAIVKSKGNSQQATPSSLTNYY-IISPLDEKLSRLLSFLTQHSNEKVIVFFLTCACVEYYSSVLKELKLPCK------------GYEYEALHGKLVQKRREKAMERFREKT--EGSALLCTDVAARGLDISDVSWTIQFDAPVDPSSYVHRVGRSARAGRVGKSLVFLTRKEEAYVDFLRLRKVPVRELEDDEVS--GSNVFVPDVLPSIRKLVLKDRDVLEKGTKAYTSYIRAYKEHHCGFIFRFASLDLGVLATSFSLLRLPKMPELRDKLGKLNFQAAGPEINIHAIPFLDKTREAAR---QKRLAAELAAGGKNAKQIKAEERAAERIRKQKERRQAEIAKGRNPNKKRGRQARIFDEWDELAKEERLYKKLRTNKITKEEYDR 588
BLAST of NO06G03820 vs. NCBI_GenBank
Match: XP_009515846.1 (hypothetical protein PHYSODRAFT_309392 [Phytophthora sojae] >EGZ28571.1 hypothetical protein PHYSODRAFT_309392 [Phytophthora sojae]) HSP 1 Score: 462.6 bits (1189), Expect = 2.200e-126 Identity = 333/614 (54.23%), Postives = 425/614 (69.22%), Query Frame = 0 Query: 21 LSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMI--------LRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLL-IGGTDVVGD-NFNRFSQDGADILVATPGRLHDVLER-YAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEKEL 624 + F +PAL +LA ALGF MTPVQA+T+PLFL+NKDVCV+A TGSGKTLAF++P V+++ + R ++ A++ISPTRELA+QIF+ A F +HA LLL +GGT V D + R + +++ TPGR D+L R + RE E+LILDEADTLL+MGF+ +L IL HLPKQRRTGLFSATQT+EV+ LARAGLRNPAT++VQV N Q TP TL N+Y +++L L F+ K +K++VFF TC +VD+FA +L + +FK G ++ V ALHGKM QKKR F++ G +L+CTDV ARG+D+PDVDWI+QY+PPQDP+FF+HRVGRTARAGR G +L+FL E YV FL+++ VP EE+ LP E VL VK ++DR++LE+GTKA+ AFVR+YKEHQCQFIFRF +LDL +AR + LL+LPK+ EL + +++ FEK T I++KDK RE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QQI+EEW+EL EE+L+K+L+ KI+ EEYE L Sbjct: 1 MRFHDFQPALCPEILAETDALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLLKTKLADGSITAPRHADVTKLVAMVISPTRELARQIFECAEKFVAHALPSVQLLLFVGGTSVDEDLSLIRGAVGKCSVVIGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLDMGFEVSLNKILEHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVAN----NTQVTPSTLQNYYCLVGH-DQRLSALHNFVHSKKGEKLIVFFSTCGSVDFFARVLEE--LFK-----GTKD-----MPVVALHGKMPQKKRTTNYDLFSSLKSG---LLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPC-----EEMTLPLDTMED--VLPKVKSFILEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRN--VRINFEKTDIKTTDIKFKDKARE-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQQIVEEWDELAEEEQLYKKLKKGKITEEEYEMAL 578
BLAST of NO06G03820 vs. NCBI_GenBank
Match: EJK55144.1 (hypothetical protein THAOC_25148 [Thalassiosira oceanica]) HSP 1 Score: 461.5 bits (1186), Expect = 5.000e-126 Identity = 276/658 (41.95%), Postives = 388/658 (58.97%), Query Frame = 0 Query: 22 SFQALKPALHANMLAAIG--ALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLLIGGTDVVGDNFNRFSQDGA-------DILVATPGRLHDVLERYAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVREL-ARAGLRNPATVAVQVVNQRTK-------EVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQ-HPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPES-DPEGAL-----------------------------------VLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTD--TRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEKEL 624 SF +++P L +L + F TPVQ +T+PLFLT+ DV V AVTGSGKTLAF++P VEMILRR LK +++GA+I+ PTRELA+Q F V C G+ PLLL+GG G + + S D A DI+V TPGR+ DVL RY ++ D+ E+EVLILDE+D LL+MGF+ TLT+IL LP+ RRTGLFSAT T V+ L ++G+RNP V V + +++ + + QATP +L+N Y+ +EKL RLLAFL +H ++KV++FF+TCA V+Y++++L + P K G +LHGK+VQK+R+ +GRF ++ G+ LLCTDVAARGLD+PD+DW IQ++ P DPS ++HRVGR+ARAGR G SL FL E Y++FL+L+ VP+ ++ + EV P S + +GA VL ++ L DR+VLE+GTKAYT+++RAYKEH C FIFRF LDL LA +++LLRLPKMPEL K+ F + I++KDK+RE+AR Q+I +EW+EL +EERL+K+LR++KI++ EY++++ Sbjct: 16 SFASIQPPLSPAILEFLSKPPYNFPSPTPVQDTTIPLFLTHHDVFVRAVTGSGKTLAFLIPVVEMILRRTVMLKSNQIGALILEPTRELARQTFGVCRDLCQSCGINEPLLLVGGGGSKGASVSAVSYDLAQFAKLQSDIIVGTPGRVEDVLTRYDNI-DVSEMEVLILDESDVLLDMGFEVTLTSILSRLPRMRRTGLFSATNTSGVKRLCVKSGMRNPVVVDVAINSEQNEHEMQAKDQKQATPSSLTN-YFLVSPLDEKLSRLLAFLNQHAEEKVIIFFLTCACVEYYSTVLQKLRPPAK-------------GYAFESLHGKLVQKRREKAMGRFRESS--NGSALLCTDVAARGLDLPDIDWTIQFDAPVDPSSYVHRVGRSARAGRSGNSLVFLTRKEEAYIDFLKLRKVPVREMPDTEVCKPPSAEDDGATSTKIVETTTKRKHASKPADERQIMSAAGSDLRVKDVLPDIRKLVCDDRDVLEKGTKAYTSYIRAYKEHHCGFIFRFASLDLGVLATSFSLLRLPKMPELRDKLGKLNFTPAGPEINIHAIQFKDKQRESAR---QKRLKAELAAGGKNAKQIKAEQRAAERIQKQKERRSNEIAKGRNPNKKRGKQQRIFDEWDELAKEERLYKKLRSNKITKSEYDRQM 653
BLAST of NO06G03820 vs. NCBI_GenBank
Match: CBJ27307.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 459.1 bits (1180), Expect = 2.500e-125 Identity = 262/492 (53.25%), Postives = 331/492 (67.28%), Query Frame = 0 Query: 54 VPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLLIGGTDVVGDNFNRFSQDGADILVATPGRLHDVLERYAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQR---------TKEVQATPQTLSNFYWTCKKPEEKLGRLLAFL-TKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWST-DTRGIEYKDKKREAAR 535 +PLF+ NKDVCVEAVTGSGKTLAF+VPA+EMILRRE LK+++VGAII++PTRELA QIF V + F PLLL+GGT V + F + GA ILV TPGR+ D+L Y ++FD RELE L+LDEADTLL+MGF TL +I LPKQRRTGLFSATQTRE + LARAGLRNPATV+V V ++ ++ QATP +L NFY C +PEEKL +L+ FL + + +K +VF TCA VD+F+ L+Q P K G V +LHG+MVQK+R AV G VAARG+D+PDV WI+Q++PPQDPS+F+HRVGRTARAG+ G+SLT L AE Y+ FL + VPL ++E + + +LE VK + DR+VLE+GTKA+ +FVR YKEHQC FIFRF LDL +ARA+ LLRLPK+ EL++ + +FEK T D I+Y DK RE AR Sbjct: 1 MPLFMCNKDVCVEAVTGSGKTLAFVVPAIEMILRREVDLKRNQVGAIILTPTRELANQIFGVVSKFSEALDEAKPLLLVGGTS-VEECLAAFRKGGASILVGTPGRVEDMLNNY-NVFDTRELEALVLDEADTLLDMGFAGTLNSIFSLLPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKSGGAGAGGVPGQKTQATPSSLENFYIVC-EPEEKLAQLVGFLKARPEGEKTIVFLSTCAGVDFFSKTLSQLPSVKAL-----------GLRVESLHGRMVQKRR---------TAVKDG------HVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREME------AFTSVNASEILEEVKGMVKTDRDVLEKGTKAFISFVRGYKEHQCSFIFRFNDLDLAAVARAFCLLRLPKIAELSNPAVAESFEKEKTVDFTAIKYADKAREKAR 457
BLAST of NO06G03820 vs. NCBI_GenBank
Match: GAQ90565.1 (DEAD-box ATP-dependent RNA helicase family protein [Klebsormidium nitens]) HSP 1 Score: 459.1 bits (1180), Expect = 2.500e-125 Identity = 264/521 (50.67%), Postives = 344/521 (66.03%), Query Frame = 0 Query: 23 FQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHA-GLRTPLLLIGGTDVVGDNFNRFSQDGADILVATPGRLHDVLERYAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQR--TKEVQATPQTLSNFYWTCKKPEEKLGRLLAFL-TKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFE-----KWSTDTRGIEYKDKKREAAR 535 F LKPAL L + + GF + TPVQAS +PLFL+NKDV VEAVTGSGKTLAF++P VEM+ + E LK+H+VGA+IISPTRELA+QI+ VA F GLR LL+GGTD VG + R ++GA++L+ TPGRL D++ER A +L+ LEVL+LDEAD LL+MGF+ +TAIL LPKQRRTGLFSATQT V ELARAGLRNP V V+V R TP +LS Y C + EEK+ +L+ FL T+ + K +V+F+TCA VDY+ ++L + P KK + ALHG+M Q R+ L F+A G +L CTDVAARGLD+P VDWI+Q++PPQDPS FIHRVGRTAR GR G+++ +LL E Y EFLRL+ VPL +L + LP + E ++ A DR++LE+GT+A +FVR YKEHQC++IFR+ L L LA A+ LL+LP+MPEL + K F + D+ + +KD +RE R Sbjct: 14 FSDLKPALSEETLQVLNSQGFERTTPVQASAIPLFLSNKDVAVEAVTGSGKTLAFVLPIVEMLRKLEGSLKRHQVGAVIISPTRELAQQIYSVAVPFVETVKGLRAS-LLVGGTD-VGADVRRLKEEGANVLIGTPGRLDDIMER-ASFLELKRLEVLVLDEADRLLDMGFQRQVTAILQRLPKQRRTGLFSATQTEAVEELARAGLRNPVRVEVKVTGSRQGAHGELKTPASLSIKYLVC-EVEEKVPQLVDFLQTQARGHKCIVYFLTCACVDYWGTVLPRLPGLKKL-------------PIVALHGRMKQSVREKALADFSAMPAG---ILFCTDVAARGLDIPGVDWIVQFDPPQDPSSFIHRVGRTARMGREGRAIVYLLPEEDTYAEFLRLRKVPLVEL-PKTAGLPS-------LTESLRTAATADRDILEKGTRAMVSFVRGYKEHQCKYIFRYKDLPLGRLAMAFGLLQLPRMPELQNGRGKYKFSTDGFVPAAVDSDSVRFKDAQREKQR 506
BLAST of NO06G03820 vs. NCBI_GenBank
Match: XP_009827342.1 (hypothetical protein H257_04500 [Aphanomyces astaci] >ETV83912.1 hypothetical protein H257_04500 [Aphanomyces astaci]) HSP 1 Score: 454.1 bits (1167), Expect = 8.000e-124 Identity = 297/622 (47.75%), Postives = 380/622 (61.09%), Query Frame = 0 Query: 21 LSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRR-----------ERQLKKH-EVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLL-IGGTDVVGDNFN-RFSQDGADILVATPGRLHDVLERYAHL--FDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASI---LTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEKEL 624 + F KP L A +LA I LGFT MTPVQ++T+PLFLTNKDV V+A TGSGKTL+F++P VEM+ RR KKH ++ A+++SPTRELA+QI+ A F S +LL +GGT V D R ++ ++V TPGR+ D+ R A L D +E EVLILDEADTLL+MGF ++ ILG LPKQRRTGLFSATQT+EV+ LARAGLRNPATV+VQ+ + TK TP TL+N Y+T + + KL LL F+ +K +VFF TCA+VD++ ++ LT+H +NV LHGKM KKR F A G +L+CTDV ARG+D+PDVDWIIQ++PPQDP+FF+HRVGRTARAGR G +LTFL E YV FL ++ VPL +++ +P S E VL+ VK L + DR+VLE+GTKA+ +FVR+YKEHQCQFIFRF L+L +A +ALL+LPK+ EL +AF I YKDK RE R XX XXXXXXXX QQI+EEWEEL +EE LFK+ + KI++EEY+ L Sbjct: 1 MKFSECKPPLCAEVLAGIEELGFTDMTPVQSATMPLFLTNKDVAVDASTGSGKTLSFVLPTVEMLRRRLLATQDDDVANVLATKKHSQLMAMLLSPTRELARQIYDQAVFFFSRVLPDVHVLLFVGGTSVDEDMAAIRAAKGYVSVIVGTPGRIEDMFNRIAELAILDTKEFEVLILDEADTLLDMGFDISINNILGKLPKQRRTGLFSATQTQEVKALARAGLRNPATVSVQLAS-NTK----TPSTLTN-YFTPVEYDAKLATLLQFVQNKPSEKHIVFFSTCASVDFYGAVLAHLTKH-----------------SNNVVTLHGKMQPKKRIAHYDEFVHAPAG---LLVCTDVVARGIDLPDVDWIIQFDPPQDPNFFVHRVGRTARAGRSGSALTFLSSNEDAYVNFLNIRKVPLTEMQ-----VPVSTEEAEHVLDQVKALQLTDRDVLEKGTKAFISFVRSYKEHQCQFIFRFRDLNLAKVATGFALLQLPKINELRCLD-NIAFTPSGVKIVDIPYKDKAREKQR--------QKKLVEIAAEHKAEKLDRFEKKQLDKKRKAAVDXXGXXXXXXXXGMHQQIVEEWEELEKEEHLFKKFKRGKITKEEYDAAL 582
BLAST of NO06G03820 vs. NCBI_GenBank
Match: XP_008872119.1 (hypothetical protein H310_08222 [Aphanomyces invadans] >ETV99563.1 hypothetical protein H310_08222 [Aphanomyces invadans]) HSP 1 Score: 452.2 bits (1162), Expect = 3.000e-123 Identity = 284/619 (45.88%), Postives = 364/619 (58.80%), Query Frame = 0 Query: 21 LSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMILRRERQLKKHEVG------------AIIISPTRELAKQIFKVATHFCSHAGLRTPLLL-IGGTDVVGDNFN-RFSQDGADILVATPGRLHDVLERYAHL--FDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQILEEWEELGREERLFKRLRNHKISREEYEKEL 624 + F P L A +L I LGFT+MTPVQ++T+PLFLTNKDV V+A TGSGKTLAF++P VEM+ RR + +V A+++SPTRELA+QI+ A +F S +LL +GGT V D R ++ ++V TPGR+ D+L R A L D +E EVLILDEADTLL+MGF ++ IL LPKQRRTGLFSATQT+EV+ LARAGLRNPATV+VQ+ + TK TP TL+NFY T + + KL LL F+ +K +VFF TCA+VD+F ++L + E +V LHGKM KKR F A G +L+CTDV ARG+D+PDVDWIIQ++PPQDP+FF+HRVGRTARAGR G +LTFL E YV FL ++ VPL EE+ + S + VLE VK L + DR+V+E+GTKA+ +FVR+YKEHQCQFIFRF L+L +A +AL +LPK+ EL VAF I YKDK RE R QQI+EEWEEL +EE LFK+ + K+++EEYE L Sbjct: 1 MKFSECTPPLCAEVLTGIHELGFTEMTPVQSATIPLFLTNKDVAVDASTGSGKTLAFVLPTVEMLRRRLLATQDDDVANVLSTKKYSQLMAMVLSPTRELARQIYDQAVYFFSRVLPDVHVLLFVGGTSVEEDMAAIRAAKGHVSVIVGTPGRIEDMLNRVAELAILDTKEFEVLILDEADTLLDMGFDVSINNILSKLPKQRRTGLFSATQTQEVKALARAGLRNPATVSVQLAS-NTK----TPSTLTNFY-TAVEYDAKLATLLRFVQSKPTEKHIVFFSTCASVDFFGAVLAHL-----------TKAEVPDVSVVTLHGKMQPKKRIAHYDEFVQATSG---LLVCTDVVARGIDLPDVDWIIQFDPPQDPNFFVHRVGRTARAGRSGSALTFLSPNEDAYVNFLSIRKVPL-----EEMNVTASAEDAVAVLEQVKALQLTDRDVVEKGTKAFISFVRSYKEHQCQFIFRFKDLNLAKVATGFALFQLPKINELRCLD-NVAFTPSGVKVVDIPYKDKAREKQR--------QKKLLEIAAEHKAEKLDRFEKKQADKKRKLAAVEDGPRRREKKKGMHQQIVEEWEELEKEEHLFKKFKRGKLTKEEYEAAL 585
BLAST of NO06G03820 vs. NCBI_GenBank
Match: OWZ24543.1 (DEAD/DEAH box RNA helicase [Phytophthora megakarya]) HSP 1 Score: 451.8 bits (1161), Expect = 4.000e-123 Identity = 264/525 (50.29%), Postives = 347/525 (66.10%), Query Frame = 0 Query: 21 LSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMI--------LRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLL-IGGTDVVGD-NFNRFSQDGADILVATPGRLHDVLER-YAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSNVAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAAR 535 + F +PAL +LA ALGF MTPVQA+T+PLFL+NKDVCV+A TGSGKTLAF++P V+++ + R ++ A++ISPTRELA+QIF+ A F + A LLL +GGT V D R + +++ TPGR D+L R + RE E+LILDEADTLL+MGF+ +L IL HLPKQRRTGLFSATQT+EV+ LARAGLRNPAT++VQV N Q TP TL N+Y +++L L F+ K +K++VFF TC +VD+F+ +L + +FK G ++ V ALHGKM QKKR F+A G +L+CTDV ARG+D+PDVDWI+QY+PPQDP+FF+HRVGRTARAGR G +L+FL E YV FL+++ VP EE+ LP E VL VK M+DR++LE+GTKA+ AFVR+YKEHQCQFIFRF +LDL +AR + LL+LPK+ EL + +++ FEK T I++KDK RE R Sbjct: 1 MRFHDFQPALCPEILAETDALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLLKAKLADGSITAPRHSNVTKLAAMVISPTRELARQIFECAEKFFTRALPSVQLLLFVGGTSVDEDLALIRGAVGKCSVVIGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLDMGFEVSLNKILEHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVAN----NTQVTPATLENYYCLVGH-DQRLSALQHFVQSKKGEKLIVFFSTCGSVDFFSRVLEE--LFK-----GNKD-----FPVVALHGKMPQKKRTTNYDHFSALKSG---LLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPC-----EEMTLPLDTMED--VLPKVKSFIMEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRN--VRIDFEKTDIKTTDIKFKDKAREKER 496
BLAST of NO06G03820 vs. NCBI_GenBank
Match: ETI43712.1 (hypothetical protein F443_11444, partial [Phytophthora parasitica P1569] >ETK83771.1 hypothetical protein L915_11136, partial [Phytophthora parasitica]) HSP 1 Score: 450.3 bits (1157), Expect = 1.200e-122 Identity = 265/528 (50.19%), Postives = 345/528 (65.34%), Query Frame = 0 Query: 21 LSFQALKPALHANMLAAIGALGFTQMTPVQASTVPLFLTNKDVCVEAVTGSGKTLAFIVPAVEMI--------LRRERQLKKHEVGAIIISPTRELAKQIFKVATHFCSHAGLRTPLLL-IGGTDVVGD-NFNRFSQDGADILVATPGRLHDVLER-YAHLFDLRELEVLILDEADTLLNMGFKATLTAILGHLPKQRRTGLFSATQTREVRELARAGLRNPATVAVQVVNQRTKEVQATPQTLSNFYWTCKKPEEKLGRLLAFLTKHKKDKVMVFFITCAAVDYFASILTQHPMFKKALGGGGREGESGGSN---VAALHGKMVQKKRDGMLGRFTAAAVGGGAVLLCTDVAARGLDVPDVDWIIQYEPPQDPSFFIHRVGRTARAGRMGKSLTFLLEAEAPYVEFLRLKSVPLAQLEEEEVALPESDPEGALVLEGVKDLAMKDREVLEQGTKAYTAFVRAYKEHQCQFIFRFVQLDLEGLARAYALLRLPKMPELTHHPIKVAFEKWSTDTRGIEYKDKKREAAR 535 + F KPAL +LA ALGF MTPVQA+T+PLFL+NKDVCV+A TGSGKTL+F++P V+++ + R ++ A+IISPTRELA+QIF+ A F + A LLL +GGT V D + R + +++ TPGR D+L R + RE E+LILDEADTLL+MGF+ +L IL HLPKQRRTGLFSATQT+EV+ LARAGLRNPAT++VQV N Q TP TL N+Y +++L L F+ K +K++VFF TC +VD+F+ +L + +FK G N V ALHGKM QKKR F+ G +L+CTDV ARG+D+PDVDWI+QY+PPQDP+FF+HRVGRTARAGR G +L+FL E YV FL+++ VP EE+ LP E VL VK ++DR++LE+GTKA+ AFVR+YKEHQCQFIFRF +LDL AR + LL+LPK+ EL + +++ FEK T I+YKDK RE R Sbjct: 16 MRFHDFKPALCPEILAETDALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLSFVLPIVQLLKAKLADGSITAPRHADLTKLVAMIISPTRELARQIFECAEKFFTRALPSVQLLLFVGGTSVDEDLSLIRGAVGKCSVVIGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLDMGFEVSLNKILEHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVAN----NTQVTPATLQNYYCLVGH-DQRLSALHHFVQSKKGEKLIVFFSTCGSVDFFSRVLEE--LFK-------------GKNDFPVVALHGKMPQKKRTTNYDHFSTLKSG---LLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPC-----EEMTLPLDTMED--VLPKVKSFILEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAAARGFCLLQLPKINELRN--VRINFEKTDIKTTDIKYKDKAREKER 511 The following BLAST results are available for this feature:
BLAST of NO06G03820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03820 ID=NO06G03820|Name=NO06G03820|organism=Nannochloropsis oceanica|type=gene|length=2396bpback to top protein sequence of NO06G03820.1 >NO06G03820.1-protein ID=NO06G03820.1-protein|Name=NO06G03820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=732bpback to top Synonyms
Publications
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