NO06G03750, NO06G03750 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03750 vs. NCBI_GenBank
Match: EWM26366.1 (trna (uracil-5-)-methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 767.3 bits (1980), Expect = 5.100e-218 Identity = 453/858 (52.80%), Postives = 538/858 (62.70%), Query Frame = 0 Query: 49 ASDANTTNVASAAA-----LGVAPQSQASVSATTSIPTPAAGQEEVLRLVVSGFQKFMNAKEVTKIMKHANIEYESLKRPMSTTVAILRFNSVAQRDKAAADLVGVNVKGRAVRTMVPVDEDRRIFNKQGQDRRGAKRGVGHEGGRDDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVEIVKTLAEVVTPLLSLPYAEQLRQKEKDIALDCVGKMFREIKKSYEQKNKQLKRAHQLGEGGSSDAARHVRAPDWAWGNRYAKEVFVTEPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEG-----------------------GKERRNAGGEEGKEEVVGA------PLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDES-RRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVE---GVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSMLRDRPSSHLS---------------------STKAADEARLAGLSPEVRATLREIMT--XXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFERGEEEAV 846 ++D N TN + AA + Q+ S SAT +I +A Q + LRLVVSGFQKFMNAKEVTKI+ I+YESLKR +STTVA+LRF SV QR+KAA DLV + VKGR +RTMVP E+RRIF++Q ++ G+KR R+ G E VKTLA+VVTP LSLPY EQL+QKE+DIA++CV K FREIKKSY KNKQLKRA+Q GEGGS RHVRAP+WAWG RYAKE FV EPI PSP +EGYRNK EFTVGR+ EG+PTVGFR+G FR+G M VGGLE GCVLLD +T RV ALQAF+RR GALPVYDQ HEGVWRYVTVR S RT QCLV VCAAI+KQG + W REQ +V+YLTA T +EG EG+ V + P ++ L + S+ T WTG+TSLFL PYEGLSNP+A++PL+HLWG Y+EE+LLGL+FRISP AFFQVNTAGAEVLYQKV+DES R ++ + E P+LILDVCCGTGTIGICAA QLE + + E G ++ NI A K + SLVLGIE+CESAVEDA NA +N V AAF+CS+AED+LLS+LR++P S +S S E +LAGLS EVRA L+ ++ DPPR+GLH DCLRALRNC +QRLVYVSCNP+KSLPRDAVALCGPPSQ+LKG +FRPVKAIPVDMFPHT HCEV+MVFERG+ E V Sbjct: 3 STDGNDTNGDTPAAATDNGTALCDQTAPSTSATEAIAL-SARQPDQLRLVVSGFQKFMNAKEVTKILAQGKIDYESLKRAVSTTVAVLRFASVEQREKAATDLVKICVKGRPLRTMVPKPEERRIFHQQDHEQCGSKRKGKLNAPREPDGKRGREGSVEGGGDTLME----------------ESVKTLADVVTPFLSLPYMEQLQQKERDIAVECVQKTFREIKKSYADKNKQLKRAYQHGEGGSDSQPRHVRAPNWAWGGRYAKETFVVEPIVPSPCLEGYRNKCEFTVGRDQEGRPTVGFRMGAFRNGVMQVGGLEEGCVLLDALTQRVVAALQAFIRRRGALPVYDQITHEGVWRYVTVRTSSRTKQCLVCVCAAIEKQGAD-WAREQAALVDYLTATTPVGMEGEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGESREVNSFSTTSGPSVSMLHAPSEKETSSNK--------------------GDSVVAPHGAWTGVTSLFLAPYEGLSNPSADEPLIHLWGSPYLEEELLGLRFRISPQAFFQVNTAGAEVLYQKVIDESLGRGGKKGDGAAEAPRLILDVCCGTGTIGICAAKQLEGRVQAGREIAEDPPGTSTQQDNI-----------AALKGQQADVATSLVLGIEICESAVEDAVENARQNRVGCAAFLCSRAEDILLSVLREKPVSSVSVSPPLPASTGNNATTPVSGGRSGHHVAEEKLAGLSAEVRAALQAVLVDQNSASAGSKTLVAAIVDPPRSGLHADCLRALRNCRHIQRLVYVSCNPSKSLPRDAVALCGPPSQRLKGEAFRPVKAIPVDMFPHTSHCEVVMVFERGDVEIV 811
BLAST of NO06G03750 vs. NCBI_GenBank
Match: GAY03400.1 (Hypothetical protein PINS_011229 [Pythium insidiosum]) HSP 1 Score: 302.0 bits (772), Expect = 6.100e-78 Identity = 197/525 (37.52%), Postives = 260/525 (49.52%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSMLRDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 + I SP EGYRNK EF++G + +G+P VGFRLG FRDG++ V CV + V +V A+Q V G +PVYD + EGVWR +TVR S+RTGQ ++ I + ++ E+ E V LT K +VG D T+ P +TSL++ Y G+S + +DPLVHL G K +EE LLGL+F +SP AFFQVNT GAE LY V + +E+ L+ DVCCGTGTIGICAA GVG+ V+GIE+C++A +DA VNA RN V N +F+ SKAEDV+ +L+ + +T A L+ ++ DPPR GLH LR+LR+CP V R+VYVSCNPT SL +DAV LCGP ++ + G +FRPV AIPVDMFPHT HCE+I+VF+R Sbjct: 1988 DSIHASPVTEGYRNKCEFSIGFDADGKPCVGFRLGLFRDGSVIVNA-PTNCVNVSTVMEQVCAAVQQLVETSG-IPVYDVKTQEGVWRLLTVRHSERTGQLMI-----ILQINPKSLSAEELEKVRALT---------------------KAHLVG-----------DDTTLANVPFQ------------------------------VTSLYIQEYAGVSAASEDDPLVHLHGSKTIEEILLGLRFSVSPSAFFQVNTQGAETLYSLVKRHANADEQ---------TLLYDVCCGTGTIGICAAA--------------GVGK------------------------------VVGIEICKAATDDAAVNAERNSVSNVSFVNSKAEDVMRDLLKTKQEGGEDATD---------------ANLKRVVA-------------IVDPPRAGLHHQVLRSLRSCPPVDRIVYVSCNPTGSLIQDAVTLCGPKTKSITGQAFRPVHAIPVDMFPHTPHCEMIIVFDR 2362
BLAST of NO06G03750 vs. NCBI_GenBank
Match: XP_008609440.1 (hypothetical protein SDRG_05502 [Saprolegnia diclina VS20] >EQC37278.1 hypothetical protein SDRG_05502 [Saprolegnia diclina VS20]) HSP 1 Score: 284.3 bits (726), Expect = 1.300e-72 Identity = 184/525 (35.05%), Postives = 246/525 (46.86%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSMLRDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 EPI+ SP +EGYRNK EFT G +VE +P VGFR+G F++G + V G+ C+ + V + + QA + ++PVYD HEGVWR +T+R SQRT Q ++ + A EAW E+ +VE LTA I+S+F+ Y G+S P + P+ H++G +EE+LLGLKFRIS AFFQVNT GAEVLY V + ++ + DVCCGTGTIGIC A + RK V+G+E+C++A +DA VNA N ++N +FI SKAEDV+ +L+ +P E L+E + DPPR GLH LR+LR+ V+R+VYVSCNPT SL DA LCGP + L+G F+PV A PVDMFPHT HCE+I+VFER Sbjct: 430 EPIAASPILEGYRNKCEFTFGYDVEHKPVVGFRVGMFKEGVVAV-GVADECINVPQVMKDICRTFQAHL-ETSSMPVYDVMTHEGVWRLLTIRLSQRTNQIMLMIQANPSSVDAEAWTTEKTALVETLTA--------------------------------------------------------------------------AHPAISSMFVQEYTGVSAPTEDHPIEHVFGATTIEEELLGLKFRISAQAFFQVNTPGAEVLYSLVKRFAAASD---------ATQVYDVCCGTGTIGICVA------------------------------------------QDARK--VIGVELCKAATDDAAVNAELNNIRNISFINSKAEDVMKELLKKKPEG------------------EGAEFLKEAVA-------------IVDPPRAGLHTKVLRSLRDTRPVKRIVYVSCNPTVSLINDATTLCGPCTSNLRGTPFKPVFAAPVDMFPHTEHCEMIIVFER 794
BLAST of NO06G03750 vs. NCBI_GenBank
Match: XP_012199899.1 (hypothetical protein SPRG_05934 [Saprolegnia parasitica CBS 223.65] >KDO29397.1 hypothetical protein SPRG_05934 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 280.4 bits (716), Expect = 1.900e-71 Identity = 184/533 (34.52%), Postives = 249/533 (46.72%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSMLRDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSL--------PRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 EPI+PSP +EGYRNK EFT G +VE +P VGFR+G F++G + VG + C+ + V + + QA + ++PVYD HEGVWR +T+R SQRT Q ++ + A EAW+ E++ +VE L+A I+S+F+ Y G+S P + P+ H++G +EE+LLGLKFRIS AFFQVNT GAEVLY V + ++ + DVCCGTGTIGIC A + RK V+G+E+C++A +DA VNA N ++N +FI SKAEDV+ +L+ +P E L+E + DPPR GLH LR+LR+ V+R+VYVSCNPT SL DA LCGP + L+G F+PV A PVDMFPHT HCE+I+VFER Sbjct: 430 EPIAPSPILEGYRNKCEFTFGYDVEHKPVVGFRVGMFKEGVVAVGAAD-DCINVPQVMKDICRTFQAHL-EASSMPVYDVMTHEGVWRLLTIRLSQRTNQIMLMIQANPSSVEAEAWVAEKKTLVETLSA--------------------------------------------------------------------------AHPTISSMFVQEYTGVSAPTEDHPIEHVFGATTIEEELLGLKFRISAQAFFQVNTPGAEVLYSLVKRFAAASD---------ATQVYDVCCGTGTIGICVA------------------------------------------QDARK--VIGVELCKAATDDAAVNAELNNIRNISFINSKAEDVMKELLKKKPEG------------------EGAEFLKEAVA-------------IVDPPRAGLHTKVLRSLRDTRPVKRIVYVSCNPTVSLINVRADSDMMDATTLCGPCTSNLRGTPFKPVFAAPVDMFPHTEHCEMIIVFER 802
BLAST of NO06G03750 vs. NCBI_GenBank
Match: OQR94780.1 (tRNA (uracil-5-)-methyltransferase [Achlya hypogyna]) HSP 1 Score: 280.0 bits (715), Expect = 2.500e-71 Identity = 182/525 (34.67%), Postives = 245/525 (46.67%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSMLRDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 E I+PSP +EGYRNK EFT G +V+ +P VGFR+G +++G + VG E C+ + V + K Q ++ LPVYD HEGVWR +T+R SQRT Q ++ V A W E+ +V LTA GI+S+F+ Y G+S P + P+ H++G +EE+LLGLKFRIS AFFQVNT GAEVLY V + + +++ + + DVCCGTGTIGIC A++ + V+G+E+C++A +DA VNA N V+N FI SKAEDV+ +LR +P + A+ + A DPPR GLH LR+LR+ V+R+VYVSCNPT SL DA LCGP + L+G F+PV A PVDMFPHT HCE+I+VFER Sbjct: 427 ERIAPSPVLEGYRNKCEFTFGYDVDKKPVVGFRVGMYKEGVVAVGSPE-DCINVPQVMKDICKTFQTYL-ATSTLPVYDVLTHEGVWRLLTIRLSQRTNQIMLMVQANPTDVDAAVWATEKTALVSTLTA--------------------------------------------------------------------------AHPGISSMFVQEYTGVSAPAEDHPIDHVYGATTIEEELLGLKFRISAQAFFQVNTPGAEVLYSLV--------KRFAAADDKTQ-VYDVCCGTGTIGICVASEARK--------------------------------------------VIGVELCKAATDDAAVNADLNAVKNITFINSKAEDVMKELLRKKPEG-----EGAEFVQQA--------------------------VAIVDPPRAGLHTKVLRSLRDTRPVKRIVYVSCNPTVSLINDAATLCGPSTSNLRGDPFKPVFAAPVDMFPHTEHCEMIIVFER 791
BLAST of NO06G03750 vs. NCBI_GenBank
Match: OQS03270.1 (tRNA (uracil-5-)-methyltransferase [Thraustotheca clavata]) HSP 1 Score: 280.0 bits (715), Expect = 2.500e-71 Identity = 178/525 (33.90%), Postives = 243/525 (46.29%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSMLRDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 EPI+PSP +EGYRNK EFT G ++ +P VGFR+G +++G + VG + C+ + V + + QA++ LPVYD HEGVWR +T+R S+RT Q ++ + A + W E+ +++ LT +T P ITS+++ Y G+S P+ + P+ H++G +EE+LLGLKFRIS AFFQVNT GAEVLY V + + + DVCCGTGTIGIC A+ V+G+E+C++A +DA VNA N + N FI SKAEDV+ +LR +P E +RE + DPPR GLH LR+LR+ V+R+VYVSCNPT SL DA LCGP + L+G F+PV A PVDMFPHT HCE+I+VFER Sbjct: 423 EPIAPSPILEGYRNKCEFTFGYDINKKPVVGFRIGMYKEGVVAVGSAD-KCINVPQVMKDICRTFQAYL-ESSPLPVYDVMTHEGVWRLLTIRLSERTKQIMLMIQANPSNIEADVWTAEKAKLISTLT-QTHP-------------------------------------------------------------------------AITSMYMQEYIGVSAPSEDHPIEHVFGATTIEEELLGLKFRISAQAFFQVNTPGAEVLYSLVKRFAAAGDS---------TQVYDVCCGTGTIGICVASDARN--------------------------------------------VIGVELCKAATDDAAVNAELNNISNITFINSKAEDVMKDLLRKKPEG------------------EGAEFVREAVA-------------IVDPPRAGLHTKVLRSLRDTRPVKRIVYVSCNPTVSLINDATTLCGPCTSNLRGEPFKPVFAAPVDMFPHTEHCEMIIVFER 787
BLAST of NO06G03750 vs. NCBI_GenBank
Match: XP_009826902.1 (23S rRNA (uracil-5-)-methyltransferase RumA [Aphanomyces astaci] >ETV83472.1 23S rRNA (uracil-5-)-methyltransferase RumA [Aphanomyces astaci]) HSP 1 Score: 279.3 bits (713), Expect = 4.300e-71 Identity = 181/526 (34.41%), Postives = 245/526 (46.58%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSMLR-DRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 +PI+PSPA+EGYRNK EF+ G + + P VGFR GT++DG + VG + C+ + + QAF+ + ++PVYD H+GVWR +T+R S T + +V V A +AW + E+VE LT++ ITS F+ Y G+S P + P+VH++G ++EE+LLGL+FRIS +AFFQVNT GAE LY V E+ + + + + DVCCGTGTIG+C A + V+GIE+C++A +DA VNAS N + NA FI +KAEDV+ ++LR R + L +A DPPR GLHV LRALR V R+VYVSCNPT SL +A LCGP + LKG +F+PV A PVDMFPHT HCE+I+VFER Sbjct: 431 QPIAPSPALEGYRNKCEFSCGYDADRNPVVGFRFGTYKDGLVSVGAPD-ECINVPATMKAMVATFQAFLNQ-SSMPVYDVLTHQGVWRLLTIRASVHTSEVMVCVQANPSALDADAWTAAKAELVEALTSK---------------------------------------------------------------------------HAITSFFVQEYSGVSAPEEDHPVVHVYGKSHIEEELLGLRFRISANAFFQVNTPGAEALYSLV--------REFTAADAKTQ-VYDVCCGTGTIGLCLAADAGK--------------------------------------------VVGIELCKAATDDAAVNASLNNISNATFINAKAEDVMKNVLRTPRQGNDLLLEQAV---------------------------------AVVDPPRAGLHVKVLRALREFNPVTRIVYVSCNPTGSLVENAATLCGPETSNLKGRAFKPVAAAPVDMFPHTEHCEMIIVFER 793
BLAST of NO06G03750 vs. NCBI_GenBank
Match: XP_002903823.1 (tRNA (uracil-5-)-methyltransferase [Phytophthora infestans T30-4] >EEY54878.1 tRNA (uracil-5-)-methyltransferase [Phytophthora infestans T30-4]) HSP 1 Score: 276.2 bits (705), Expect = 3.600e-70 Identity = 189/528 (35.80%), Postives = 249/528 (47.16%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSML---RDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 + I SP EGYRNK EF+ G + E +P VGFRLG FR+G++ V + C+ + V +Q V +PVY GVWR +TVR+S TG+ +V V + G+ E+R V+ L + +T + N ITS+F+ YEGLS P+ NDP+ H++G +EE LLG++F +SP+AFFQVNT GAE LY V + +E L+ DVCCGTGTIGICA+ EGVG+ V+GIE+C+ A +DA+VNA N VQN +F+ SKAEDV+ S+L RD HL+ A DPPR GLH + LRALR CP V+R+VYVSCNPT SL RDAV LCGP ++ L+G +F PV A+PVDMFPHT HCE+I+VF+R Sbjct: 447 DSIHASPVTEGYRNKCEFSFGFDKEDKPCVGFRLGLFREGSVVVSKPD-ECINVSKEMKAVCAVMQNIV-ETSDVPVYSVTTKSGVWRVLTVRQSVSTGELMVMV--QVNLVGKTP---EERAAVKDLVVK-------------------------------------RLTDESNAFK------------------------------ITSVFIQEYEGLSAPSDNDPVEHVYGKTKLEEHLLGMRFSVSPNAFFQVNTHGAEKLYSLVKQYANADEH---------TLLYDVCCGTGTIGICAS--------------EGVGK------------------------------VVGIEICKPATDDAQVNAILNNVQNVSFVNSKAEDVMKSLLQKKRDESEKHLNRVVA-----------------------------------IVDPPRAGLHHNVLRALRACPPVERIVYVSCNPTNSLVRDAVTLCGPSTKSLQGQAFEPVHAVPVDMFPHTPHCEMIIVFDR 812
BLAST of NO06G03750 vs. NCBI_GenBank
Match: XP_008869041.1 (23S rRNA (uracil-5-)-methyltransferase RumA [Aphanomyces invadans] >ETW02436.1 23S rRNA (uracil-5-)-methyltransferase RumA [Aphanomyces invadans]) HSP 1 Score: 273.9 bits (699), Expect = 1.800e-69 Identity = 177/525 (33.71%), Postives = 242/525 (46.10%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSMLRDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 +PI+PSPA+EGYRNK EF+ G + + +P VGFR GT++DG + VGG + CV + + K Q F+ + LPVYD HEGVWR +T+R S T + +V V A E W + +V +T++ I S F+ Y G+S P + P+VH++G +EE+LLGL+FRIS +AFFQVNT GAE LY V E+ +++ + + DVCCGTGTIG+C A + ++GIE+C++A +DA NA+ NG+ NA F+ +KAEDV+ +LR + ++ RL V DPPR GLH+ LRALR V R+VYVSCNPT SL +A LCGP + LKG +F+PV A PVDMFPHT HCE+I+VFER Sbjct: 431 KPITPSPALEGYRNKCEFSCGYDADRKPIVGFRFGTYKDGLVSVGGPD-DCVNVPASMKAMVKTFQEFLNQ-SELPVYDVTTHEGVWRLLTIRASVHTKEVMVCVQANPSSLDETTWEAAKSNVVAAMTSK---------------------------------------------------------------------------HAIASFFVQEYTGVSAPEEDHPVVHVYGKTQIEEELLGLRFRISANAFFQVNTPGAEALYSLV--------REYAAADDKTQ-VYDVCCGTGTIGLCLAADAGK--------------------------------------------IVGIELCKAATDDAAANATINGISNATFVNAKAEDVMKEVLR--------KPREGNDLRLERAVAVV------------------------DPPRAGLHIKVLRALRAFRPVTRIVYVSCNPTGSLVENAATLCGPETSNLKGAAFKPVAAAPVDMFPHTEHCEMIIVFER 793
BLAST of NO06G03750 vs. NCBI_GenBank
Match: ETI42918.1 (23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora parasitica P1569] >ETL89551.1 23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora parasitica] >ETM42834.1 23S rRNA (uracil-5-)-methyltransferase RumA [Phytophthora parasitica]) HSP 1 Score: 273.5 bits (698), Expect = 2.300e-69 Identity = 186/528 (35.23%), Postives = 248/528 (46.97%), Query Frame = 0 Query: 315 EPISPSPAVEGYRNKNEFTVGRNVEGQPTVGFRLGTFRDGNMHVGGLEGGCVLLDPVTLRVAKALQAFVRRPGALPVYDQQKHEGVWRYVTVRRSQRTGQCLVWVCAAIKKQGEEAWMREQREMVEYLTARTRPLLEGGKERRNAGGEEGKEEVVGAPLLATLPSTSDSVTIDKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCWTGITSLFLGPYEGLSNPNANDPLVHLWGLKYMEEDLLGLKFRISPHAFFQVNTAGAEVLYQKVVDESRRNEEEWEKEEERPKLILDVCCGTGTIGICAATQLEEKKMEEEVVVEGVGEEEKNIIARISGEDDPSGATKQLEEQERKSLVLGIEMCESAVEDARVNASRNGVQNAAFICSKAEDVLLSML---RDRPSSHLSSTKAADEARLAGLSPEVRATLREIMTXXXXXXXXXXXXXXXDPPRNGLHVDCLRALRNCPRVQRLVYVSCNPTKSLPRDAVALCGPPSQKLKGVSFRPVKAIPVDMFPHTRHCEVIMVFER 840 + I SP EGYRNK EF+ G + E +P VGFRLG FR+G++ V + C+ + V +Q + +PVY+ GVWR +TVR+S TG+ +V V K + + E+R V+ L + L S+S ITS+F+ YEGLS P+ NDP+ H++G +EE LLG++F +SP+AFFQVNT GAE LY V + +E L+ DVCCGTGTIGICA+ +GVG+ V+GIE+C+ A +DA+VNA N VQN +F+ SKAEDV+ +L RD HL+ A DPPR GLH LRALR CP V+R+VYVSCNPT SL RDAV LCGP ++ ++G +F PV A+PVDMFPHT HCE+I+VF+R Sbjct: 454 DSIHASPVTEGYRNKCEFSFGFDKEDKPCVGFRLGLFREGSVVVSKPD-ECINVSKEMKAVCAVMQN-ILETSDVPVYNVTTKSGVWRVLTVRQSVNTGELMVMVQVNPKDKTD-----EERAAVKDLVVK------------------------------RLTDESNSFK-------------------------------------ITSIFMQEYEGLSAPSDNDPVEHVYGNTKLEEYLLGMRFSVSPNAFFQVNTRGAEKLYSLVKQYANADEH---------TLLYDVCCGTGTIGICAS--------------KGVGK------------------------------VVGIEICKPATDDAKVNAVLNDVQNVSFVNSKAEDVMKDLLHKKRDESEQHLNRVVA-----------------------------------IVDPPRAGLHHQVLRALRACPPVERIVYVSCNPTNSLVRDAVTLCGPSTKSIQGQAFEPVHAVPVDMFPHTPHCEMIIVFDR 819 The following BLAST results are available for this feature:
BLAST of NO06G03750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03750 ID=NO06G03750|Name=NO06G03750|organism=Nannochloropsis oceanica|type=gene|length=2710bpback to top protein sequence of NO06G03750.1 >NO06G03750.1-protein ID=NO06G03750.1-protein|Name=NO06G03750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=882bpback to top Synonyms
Publications
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