NO06G03650, NO06G03650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03650 vs. NCBI_GenBank
Match: EWM26356.1 (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 309.7 bits (792), Expect = 1.500e-80 Identity = 146/179 (81.56%), Postives = 167/179 (93.30%), Query Frame = 0 Query: 1 MGQLCERMVDLLSRRIEKRVVLLGLDNAGKTTCVYRLLLGKKIDTVPTIGFNSEEVPHNRCNFIMWDIGGQAKIRKLWKHYIESADALIFVVDSQDRARLKEARAAFKRMLRHKTLRNTVLLIYANKTDYENSMTPAEIVEGLDVKRVVGDRKWFIQKTCAISGQGLREGLDWLSRALE 180 MGQLC R+V+L+SRR EKRVVLLGLDNAGKTTCVYRLLLGKK+DTVPT+GFNSEEV + RCNFIMWDIGGQAKIRKLWKHY+ESADALIFVVD+QDRARL EAR+AFKRMLR+KTL+NTVLLI ANK DYE++M+ AEIV+GL+VKRVVG R W++Q+TCAISGQGLREG+DWL + LE Sbjct: 1 MGQLCTRLVELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVQGLEVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLE 179
BLAST of NO06G03650 vs. NCBI_GenBank
Match: XP_005852687.1 (adp-ribosylation factor, partial [Nannochloropsis gaditana CCMP526] >EKU23144.1 adp-ribosylation factor, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 308.9 bits (790), Expect = 2.500e-80 Identity = 146/179 (81.56%), Postives = 165/179 (92.18%), Query Frame = 0 Query: 1 MGQLCERMVDLLSRRIEKRVVLLGLDNAGKTTCVYRLLLGKKIDTVPTIGFNSEEVPHNRCNFIMWDIGGQAKIRKLWKHYIESADALIFVVDSQDRARLKEARAAFKRMLRHKTLRNTVLLIYANKTDYENSMTPAEIVEGLDVKRVVGDRKWFIQKTCAISGQGLREGLDWLSRALE 180 MGQLC R+ +L+SRR EKRVVLLGLDNAGKTTCVYRLLLGKK+DTVPT+GFNSEEV + RCNFIMWDIGGQAKIRKLWKHY+ESADALIFVVD+QDRARL EAR+AFKRMLR+KTL+NTVLLI ANK DYE++M+ AEIV GLDVKRVVG R W++Q+TCAISGQGLREG+DWL + LE Sbjct: 1 MGQLCTRLAELVSRRTEKRVVLLGLDNAGKTTCVYRLLLGKKVDTVPTVGFNSEEVRYQRCNFIMWDIGGQAKIRKLWKHYVESADALIFVVDAQDRARLAEARSAFKRMLRYKTLKNTVLLILANKMDYEHAMSSAEIVHGLDVKRVVGRRPWWVQETCAISGQGLREGMDWLLQTLE 179
BLAST of NO06G03650 vs. NCBI_GenBank
Match: XP_011075817.1 (ADP-ribosylation factor 2 [Sesamum indicum]) HSP 1 Score: 193.7 bits (491), Expect = 1.200e-45 Identity = 89/179 (49.72%), Postives = 124/179 (69.27%), Query Frame = 0 Query: 1 MGQLCERMVDLLSRRIEKRVVLLGLDNAGKTTCVYRLLLGKKIDTVPTIGFNSEEVPHNRCNFIMWDIGGQAKIRKLWKHYIESADALIFVVDSQDRARLKEARAAFKRMLRHKTLRNTVLLIYANKTDYENSMTPAEIVEGLDVKRVVGDRKWFIQKTCAISGQGLREGLDWLSRALE 180 MGQ ++ D L E RVV+LGLD AGKTT +Y+L +G+ + TVPTIGFN E+V + F +WD+GGQ K+R LW+HY + D LI+VVDS DR R+ A+ F+ ++R ++N ++L++ANK D +MTP EI +GL + + DRKW I++TCAI G+GL EGLDWLS L+ Sbjct: 1 MGQALRKLFDTLFGNTEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIAMAKKEFQAIIRDPFMKNAIILVFANKQDLRGAMTPMEICDGLGLND-LKDRKWHIERTCAIKGEGLYEGLDWLSNTLK 178
BLAST of NO06G03650 vs. NCBI_GenBank
Match: P91924.3 (RecName: Full=ADP-ribosylation factor >BAA19225.1 ADP-ribosylation factor [Dugesia japonica]) HSP 1 Score: 193.0 bits (489), Expect = 2.000e-45 Identity = 92/179 (51.40%), Postives = 122/179 (68.16%), Query Frame = 0 Query: 1 MGQLCERMVDLLSRRIEKRVVLLGLDNAGKTTCVYRLLLGKKIDTVPTIGFNSEEVPHNRCNFIMWDIGGQAKIRKLWKHYIESADALIFVVDSQDRARLKEARAAFKRMLRHKTLRNTVLLIYANKTDYENSMTPAEIVEGLDVKRVVGDRKWFIQKTCAISGQGLREGLDWLSRALE 180 MG L ++D L + E R++++GLD AGKTT +Y+L LG+ + T+PTIGFN E V + +F +WD+GGQ KIR LW+HY ++ LIFVVDS DR R+ EAR RML LR+ VLL++ANK D N+M PAEI + L + + +R W+IQ TCA SG GL EGLDWLS L+ Sbjct: 1 MGNLVTHLLDRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLNEDELRDAVLLVFANKQDLPNAMNPAEITDKLGL-HSLRNRSWYIQATCATSGDGLYEGLDWLSTTLK 178
BLAST of NO06G03650 vs. NCBI_GenBank
Match: XP_015578297.1 (PREDICTED: ADP-ribosylation factor 1 isoform X2 [Ricinus communis]) HSP 1 Score: 191.8 bits (486), Expect = 4.400e-45 Identity = 90/182 (49.45%), Postives = 123/182 (67.58%), Query Frame = 0 Query: 1 MGQLCERMVDLLSRRIEKRVVLLGLDNAGKTTCVYRLLLGKKIDTVPTIGFNSEEVPHNRCNFIMWDIGGQAKIRKLWKHYIESADALIFVVDSQDRARLKEARAAFKRMLRHKTLRNTVLLIYANKTDYENSMTPAEIVEGLDVKRVVGDRKWFIQKTCAISGQGLREGLDWLSRALEING 183 MG R++ LL + E R++++GLD AGKTT +Y+L LG+ + T+PTIGFN E V + +F +WD+GGQ KIR LW+HY ++ LIFVVDS DR R+ EAR +RML LR+ LL++ANK D N+MT +E+ + L + + R+W+IQ TCA SGQGL EGLDWLS + G Sbjct: 1 MGMAISRLIKLLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERISEARDELQRMLSEDELRDATLLVFANKQDLPNAMTVSEVTDKLGL-HSLRQRRWYIQATCATSGQGLYEGLDWLSSNISSKG 181
BLAST of NO06G03650 vs. NCBI_GenBank
Match: EWM24831.1 (adp-ribosylation factor [Nannochloropsis gaditana]) HSP 1 Score: 191.0 bits (484), Expect = 7.600e-45 Identity = 87/179 (48.60%), Postives = 127/179 (70.95%), Query Frame = 0 Query: 1 MGQLCERMVDLLSRRIEKRVVLLGLDNAGKTTCVYRLLLGKKIDTVPTIGFNSEEVPHNRCNFIMWDIGGQAKIRKLWKHYIESADALIFVVDSQDRARLKEARAAFKRMLRHKTLRNTVLLIYANKTDYENSMTPAEIVEGLDVKRVVGDRKWFIQKTCAISGQGLREGLDWLSRALE 180 MGQL R++D+L + ++R+++LGLD AGKTT +YRL LG+ + ++PTIGFN E+V + +F +WD+GGQ ++RKLW+HY + DALIFV+DS DRARL EAR+ +L L +++LL+YANK D +++ E+ L + V R W+IQ +CA++G GL EGLDWLS L+ Sbjct: 1 MGQLMTRVLDVLWGKEDRRLLMLGLDAAGKTTILYRLQLGEDVHSIPTIGFNVEKVEYRNISFTIWDVGGQDRLRKLWRHYYKDNDALIFVIDSADRARLHEARSELHHLLSEPQLLDSILLVYANKADLPQAISVQEMARLLQLDNVAKGRPWYIQPSCAMTGDGLVEGLDWLSEKLK 179
BLAST of NO06G03650 vs. NCBI_GenBank
Match: GAV64006.1 (Arf domain-containing protein, partial [Cephalotus follicularis]) HSP 1 Score: 191.0 bits (484), Expect = 7.600e-45 Identity = 91/180 (50.56%), Postives = 122/180 (67.78%), Query Frame = 0 Query: 1 MGQLCERMVDLLSRRIEKRVVLLGLDNAGKTTCVYRLLLGKKIDTVPTIGFNSEEVPHNRCNFIMWDIGGQAKIRKLWKHYIESADALIFVVDSQDRARLKEARAAFKRMLRHKTLRNTVLLIYANKTDYENSMTPAEIVEGLDVKRVVGDRKWFIQKTCAISGQGLREGLDWLSRALEI 181 MG R+V +L R E R++++GLD AGKTT +Y+L LG+ + T+PTIGFN E V + +F +WD+GGQ KIR LW+HY ++ LIFVVDS DR R+ EAR RML LR+ VLL++ANK D N+M+ +EI + L + R+W+IQ CA SGQGL EGLDWLS ++ I Sbjct: 38 MGMAISRLVKMLFARKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVSFTVWDVGGQDKIRSLWRHYFQNTQGLIFVVDSNDRERVSEARDELHRMLSEDELRDAVLLVFANKQDLPNAMSVSEITDKLGL-HSFRQRRWYIQSACATSGQGLYEGLDWLSSSISI 216
BLAST of NO06G03650 vs. NCBI_GenBank
Match: XP_003070170.1 (ADP-ribosylation factor family protein [Coccidioides posadasii C735 delta SOWgp] >XP_001243102.2 ADP-ribosylation factor [Coccidioides immitis RS] >EER28025.1 ADP-ribosylation factor family protein [Coccidioides posadasii C735 delta SOWgp] >EFW23160.1 ADP-ribosylation factor [Coccidioides posadasii str. Silveira] >EAS31519.3 ADP-ribosylation factor [Coccidioides immitis RS]) HSP 1 Score: 190.3 bits (482), Expect = 1.300e-44 Identity = 88/182 (48.35%), Postives = 126/182 (69.23%), Query Frame = 0 Query: 1 MGQLCERMVDLLSRRIEKRVVLLGLDNAGKTTCVYRLLLGKKIDTVPTIGFNSEEVPHNRCNFIMWDIGGQAKIRKLWKHYIESADALIFVVDSQDRARLKEARAAFKRMLRHKTLRNTVLLIYANKTDYENSMTPAEIVEGLDVKRVVGDRKWFIQKTCAISGQGLREGLDWLSRALEING 183 MG ++ D + R+ E R++++GLD AGKTT +Y+L LG+ + T+PTIGFN E V + F +WD+GGQ KIR LW+HY ++ +IFVVDS DR R+ EAR +RML LR+ +LL++ANK D N+M+PAEI + L ++ + R W+IQ TCA +G GL EGL+WL+ AL+ +G Sbjct: 1 MGMTFSKLFDSIWRKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLT-RRAWYIQSTCATTGDGLYEGLEWLANALKKSG 181
BLAST of NO06G03650 vs. NCBI_GenBank
Match: XP_002524920.1 (PREDICTED: ADP-ribosylation factor 1 isoform X1 [Ricinus communis] >XP_015578296.1 PREDICTED: ADP-ribosylation factor 1 isoform X1 [Ricinus communis] >EEF37417.1 ADP-ribosylation factor, arf, putative [Ricinus communis]) HSP 1 Score: 190.3 bits (482), Expect = 1.300e-44 Identity = 89/175 (50.86%), Postives = 121/175 (69.14%), Query Frame = 0 Query: 1 MGQLCERMVDLLSRRIEKRVVLLGLDNAGKTTCVYRLLLGKKIDTVPTIGFNSEEVPHNRCNFIMWDIGGQAKIRKLWKHYIESADALIFVVDSQDRARLKEARAAFKRMLRHKTLRNTVLLIYANKTDYENSMTPAEIVEGLDVKRVVGDRKWFIQKTCAISGQGLREGLDWLS 176 MG R++ LL + E R++++GLD AGKTT +Y+L LG+ + T+PTIGFN E V + +F +WD+GGQ KIR LW+HY ++ LIFVVDS DR R+ EAR +RML LR+ LL++ANK D N+MT +E+ + L + + R+W+IQ TCA SGQGL EGLDWLS Sbjct: 1 MGMAISRLIKLLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERISEARDELQRMLSEDELRDATLLVFANKQDLPNAMTVSEVTDKLGL-HSLRQRRWYIQATCATSGQGLYEGLDWLS 174
BLAST of NO06G03650 vs. NCBI_GenBank
Match: XP_022491585.1 (hypothetical protein PENARI_c003G09668 [Penicillium arizonense] >OGE56157.1 hypothetical protein PENARI_c003G09668 [Penicillium arizonense] >OQD85828.1 hypothetical protein PENANT_c009G00599 [Penicillium antarcticum]) HSP 1 Score: 190.3 bits (482), Expect = 1.300e-44 Identity = 91/182 (50.00%), Postives = 124/182 (68.13%), Query Frame = 0 Query: 1 MGQLCERMVDLLSRRIEKRVVLLGLDNAGKTTCVYRLLLGKKIDTVPTIGFNSEEVPHNRCNFIMWDIGGQAKIRKLWKHYIESADALIFVVDSQDRARLKEARAAFKRMLRHKTLRNTVLLIYANKTDYENSMTPAEIVEGLDVKRVVGDRKWFIQKTCAISGQGLREGLDWLSRALEING 183 MG R+ D L R E R++++GLD AGKTT +Y+L LG+ + T+PTIGFN E V + F +WD+GGQ KIR LW+HY ++ +IFVVDS DR R+ EAR +RML LR+ +LL++ANK D N+M+PAEI + L ++ + R WFIQ TCA +G GL EGL+WL+ AL +G Sbjct: 1 MGITFSRLFDRLWGRKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLT-RRSWFIQSTCATTGDGLYEGLEWLADALRKSG 181 The following BLAST results are available for this feature:
BLAST of NO06G03650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03650 ID=NO06G03650|Name=NO06G03650|organism=Nannochloropsis oceanica|type=gene|length=1314bpback to top protein sequence of NO06G03650.1 >NO06G03650.1-protein ID=NO06G03650.1-protein|Name=NO06G03650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=438bpback to top Synonyms
Publications
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