NO06G03580, NO06G03580 (gene) Nannochloropsis oceanica

Overview
NameNO06G03580
Unique NameNO06G03580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3290
Alignment locationchr6:982240..985529 -

Link to JBrowse

Properties
Property NameValue
DescriptionATPase, V0/A0 complex, subunit C/D
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:982240..985529 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015991ATP hydrolysis coupled proton transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0033179proton-transporting V-type ATPase, V0 domain
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR036079ATPase_su_C-like
IPR016727ATPase_V0-cplx_dsu
IPR002843ATPase_V0-cplx_csu/dsu
Homology
[Close]
BLAST of NO06G03580 vs. NCBI_GenBank
Match: XP_009033412.1 (hypothetical protein AURANDRAFT_59824 [Aureococcus anophagefferens] >EGB12374.1 hypothetical protein AURANDRAFT_59824 [Aureococcus anophagefferens])

HSP 1 Score: 523.9 bits (1348), Expect = 4.400e-145
Identity = 245/372 (65.86%), Postives = 313/372 (84.14%), Query Frame = 0 
Query:   17 NLDHGFPEAVVRGFRSGFLTDYDYHHLTQCESLEDMKMNLQETDYDQFMANEQHIIPVTFRDKALQKLVQEMEFLRAHAVEPLATFLDYISYEFMIDNVMLLLKGTLSGRSANELIKQCHPLGLFKESTMRSIPAFEASPKGYADLYQTVLIDTPVGPYFSQYLQDNAEQLSDASEMRNILEEVQIEVIKNSLHKLYLEDFYRVCQAIGGETAEFMGHLIKLRADRMAVNIAVNSIGTPLNEPAMRST-RHKLFPAVGYLYPAGTARLAEVTDEGQMEGALSAVPEYQKLYA--SIAGAKDKTLEDLFYEKDVQALEVAFEGQMHFAPFYAYVKLKQQEIRNLVWIAECILQGQKDEINKFVPIFSDSSPWR 386
            N DHG  EA+ RGFR+GFL+D DYHHLTQCESLED+KMNL ETDYD F+ANE  + P    + A +K+V E +FLRA AVEPLATFLDYI++E+MIDNVMLLLKGT+SGR   ELI+QCHPLG+F++STMRSIP FE SPKGYADLYQTVL+DTPVGPYFS++LQ+++E+L+ A+E+RN+LEEV++E+IK+SL KLYLEDFY  C ++GG+TAE MG ++K RAD+ A+NI +NS GTPLNEP+MRST R +L+P++G+LYPAGT +LA+V DEGQ+  A+S  P Y++++A        D++++D FYE++VQ LE+AFEGQMHF  +YAYVKLK+QEIRNLVWI+ECI+Q QKDEINKFVP FS ++PWR
Sbjct:    8 NRDHGMTEALCRGFRTGFLSDTDYHHLTQCESLEDVKMNLAETDYDAFLANEASVSPAVILECATKKMVAEFQFLRAQAVEPLATFLDYITFEYMIDNVMLLLKGTISGRDVGELIEQCHPLGMFRDSTMRSIPTFENSPKGYADLYQTVLVDTPVGPYFSRFLQESSEKLTSAAEVRNVLEEVEMEIIKHSLMKLYLEDFYYFCCSVGGDTAEIMGEILKARADQRAINITLNSFGTPLNEPSMRSTDRKRLYPSIGFLYPAGTEKLADVADEGQLGAAVSHFPVYREIWAVHQNESVDDRSIDDAFYEREVQMLELAFEGQMHFGIYYAYVKLKEQEIRNLVWISECIVQQQKDEINKFVPCFSSTAPWR 379
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BLAST of NO06G03580 vs. NCBI_GenBank
Match: CBN76508.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 503.1 bits (1294), Expect = 8.100e-139
Identity = 237/394 (60.15%), Postives = 314/394 (79.70%), Query Frame = 0 
Query:    2 SVASDVMEAGGLGTFNLDHGFPEAVVRGFRSGFLTDYDYHHLTQCESLEDMKMNLQETDYDQFMANEQHIIPVTFRDKALQKLVQEMEFLRAHAVEPLATFLDYISYEFMIDNVMLLLKGTLSGRSANELIKQCHPLGLFKESTMRSIPAFEASPKGYADLYQTVLIDTPVGPYFSQYLQDNAEQLSDASEMRNILEEVQIEVIKNSLHKLYLEDFYRVCQAIGGETAEFMGHLIKLRADRMAVNIAVNSIGTPLNEPAMRST-RHKLFPAVGYLYPAGTARLAEVTDEGQMEGALSAVPEYQKLYA--SIAGAKDKTLEDLFYEKDVQALEVAFEGQMHFAPFYAYVKLKQQEIRNLVWIAECILQGQKDEINKFVPIFSDSSPWRLAGKLNR 393
            SVA D    G    FN+ HGFPE +VRG+R+GFLTD DY++L QCESLED+K+NLQETDYDQF++ E  + P   +++A +KLV E  FL+A A EPL+TFL+YI+YE+MI+N+M+LLKGTLSGR  NELI+QCHP+GLFK+STMR IPAFEASPKGYADLYQTVL+DTP+GPYFSQ+L+   E+L++A+++R+ILEEV+IE+IKNSL KLYLEDF+R C+++GG+T+  M  L++ RADR A+NI +NS G PLNEP+MRST R +L+PA+G LYP  T    EV DE Q+   L   P Y+ ++A        DK+++D F+E+DV  LE+AF+GQMHF PFYAYVKLK+QEIRNLVWI+ECI+Q Q+DEI K++P+FS+++ W++A +  R
Sbjct:    6 SVAED---PGDFHIFNVHHGFPEGLVRGYRTGFLTDMDYNNLCQCESLEDVKLNLQETDYDQFLSQENKVTPAALQERATKKLVVEFNFLKAQAQEPLSTFLEYITYEYMIENIMMLLKGTLSGRDVNELIEQCHPMGLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQERLTNAAQVRDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTLYPEATNLFQEVGDESQLAAVLDMYPVYRGIWAVHQNEAYGDKSIDDAFFERDVDMLELAFQGQMHFGPFYAYVKLKEQEIRNLVWISECIVQQQRDEIGKYIPLFSENASWKVARRAGR 396
[Close]
BLAST of NO06G03580 vs. NCBI_GenBank
Match: GAY06361.1 (H or Na translocating Ftype putative, partial [Pythium insidiosum])

HSP 1 Score: 492.3 bits (1266), Expect = 1.400e-135
Identity = 239/385 (62.08%), Postives = 301/385 (78.18%), Query Frame = 0 
Query:    7 VMEAGGLGTFNLDHGFPEAVVRGFRSGFLTDYDYHHLTQCESLEDMKMNLQETDYDQFMANEQHII-PVTFRDKALQKLVQEMEFLRAHAVEPLATFLDYISYEFMIDNVMLLLKGTLSGRSANELIKQCHPLGLFKESTMRSIPAFEASPKGYADLYQTVLIDTPVGPYFSQYLQDNA--EQLSDASEMRNILEEVQIEVIKNSLHKLYLEDFYRVCQAIGGETAEFMGHLIKLRADRMAVNIAVNSIGTPLNEPAMR-STRHKLFPAVGYLYPAGTARLAEVTDEGQMEGALSAVPEYQKLYA--SIAGAKDKTLEDLFYEKDVQALEVAFEGQMHFAPFYAYVKLKQQEIRNLVWIAECILQGQKDEINKFVPIFSDSSPWR 386
            V+ AG + +FN+ HGF EA+VRGFRSGFL D DYHHLTQCE+LED+K+NLQETDYDQFMA+E  ++ P   +     KLVQE  FLRA A EPL  FLDYI+YE+MIDNV+LLLKGTL+GR  NELI Q HPLG F +S MRSI AFE + KGY+DLY+TVLIDTP+G YFSQ+L+++A  +++   SE+RN+LEEVQ+E+IKNS+ KL+LEDFY  CQ +GG+TA  MG ++K RADRMA+NI +NS GTPLNEPAMR S R  L+P++GYLYP  T RLAE  DE  +  AL   P Y+K++      G  +K+++D FYE+DVQ  E+AF+ QMHFA FYAYVKLK+QE+RN+VWI ECI+Q Q+D IN F+PIFSD++PWR
Sbjct:  427 VLPAGDISSFNIQHGFVEALVRGFRSGFLDDVDYHHLTQCETLEDVKLNLQETDYDQFMADESGVVSPSLIQAGTTNKLVQEFLFLRAQAAEPLGQFLDYITYEYMIDNVILLLKGTLNGRDVNELIPQLHPLGKFDDSIMRSICAFEPNSKGYSDLYETVLIDTPIGTYFSQFLEESASGDRMDGTSEVRNVLEEVQMELIKNSMLKLWLEDFYNFCQKVGGDTATMMGEILKARADRMAINITLNSFGTPLNEPAMRISDRKPLYPSIGYLYPEATERLAEAGDESSLGAALDPYPIYRKIWEVHQSQGVDNKSIDDAFYERDVQMGELAFQSQMHFACFYAYVKLKEQEVRNIVWICECIVQKQRDAINNFIPIFSDNAPWR 811
[Close]
BLAST of NO06G03580 vs. NCBI_GenBank
Match: GAY03534.1 (leucine-tRNA ligase [Pythium insidiosum])

HSP 1 Score: 492.3 bits (1266), Expect = 1.400e-135
Identity = 239/385 (62.08%), Postives = 301/385 (78.18%), Query Frame = 0 
Query:    7 VMEAGGLGTFNLDHGFPEAVVRGFRSGFLTDYDYHHLTQCESLEDMKMNLQETDYDQFMANEQHII-PVTFRDKALQKLVQEMEFLRAHAVEPLATFLDYISYEFMIDNVMLLLKGTLSGRSANELIKQCHPLGLFKESTMRSIPAFEASPKGYADLYQTVLIDTPVGPYFSQYLQDNA--EQLSDASEMRNILEEVQIEVIKNSLHKLYLEDFYRVCQAIGGETAEFMGHLIKLRADRMAVNIAVNSIGTPLNEPAMR-STRHKLFPAVGYLYPAGTARLAEVTDEGQMEGALSAVPEYQKLYA--SIAGAKDKTLEDLFYEKDVQALEVAFEGQMHFAPFYAYVKLKQQEIRNLVWIAECILQGQKDEINKFVPIFSDSSPWR 386
            V+ AG + +FN+ HGF EA+VRGFRSGFL D DYHHLTQCE+LED+K+NLQETDYDQFMA+E  ++ P   +     KLVQE  FLRA A EPL  FLDYI+YE+MIDNV+LLLKGTL+GR  NELI Q HPLG F +S MRSI AFE + KGY+DLY+TVLIDTP+G YFSQ+L+++A  +++   SE+RN+LEEVQ+E+IKNS+ KL+LEDFY  CQ +GG+TA  MG ++K RADRMA+NI +NS GTPLNEPAMR S R  L+P++GYLYP  T RLAE  DE  +  AL   P Y+K++      G  +K+++D FYE+DVQ  E+AF+ QMHFA FYAYVKLK+QE+RN+VWI ECI+Q Q+D IN F+PIFSD++PWR
Sbjct:  919 VLPAGDISSFNIQHGFVEALVRGFRSGFLDDVDYHHLTQCETLEDVKLNLQETDYDQFMADESGVVSPSLIQAGTTNKLVQEFLFLRAQAAEPLGQFLDYITYEYMIDNVILLLKGTLNGRDVNELIPQLHPLGKFDDSIMRSICAFEPNSKGYSDLYETVLIDTPIGTYFSQFLEESASGDRMDGTSEVRNVLEEVQMELIKNSMLKLWLEDFYNFCQKVGGDTATMMGEILKARADRMAINITLNSFGTPLNEPAMRISDRKPLYPSIGYLYPEATERLAEAGDESSLGAALDPYPIYRKIWEVHQSQGVDNKSIDDAFYERDVQMGELAFQSQMHFACFYAYVKLKEQEVRNIVWICECIVQKQRDAINNFIPIFSDNAPWR 1303
[Close]
BLAST of NO06G03580 vs. NCBI_GenBank
Match: EJK75011.1 (hypothetical protein THAOC_03282 [Thalassiosira oceanica])

HSP 1 Score: 486.9 bits (1252), Expect = 6.000e-134
Identity = 234/379 (61.74%), Postives = 300/379 (79.16%), Query Frame = 0 
Query:   13 LGTFNLDHGFPEAVVRGFRSGFLTDYDYHHLTQCESLEDMKMNLQETDYDQFMANEQHIIPVTFRDKALQKLVQEMEFLRAHAVEPLATFLDYISYEFMIDNVMLLLKGTLSGRSANELIKQCHPLGLFKESTMRSIPAFEASPKGYADLYQTVLIDTPVGPYFSQYLQDNAEQLSDASEMRNILEEVQIEVIKNSLHKLYLEDFYRVCQAIGGETAEFMGHLIKLRADRMAVNIAVNSIGTPLNEPAMR-STRHKLFPAVGYLYPAGTARLAEVTDEGQMEGALSAVPEYQKLY-ASIAGAKDKTLEDLFYEKDVQALEVAFEGQMHFAPFYAYVKLKQQEIRNLVWIAECILQGQKDEINKFVPIFSDSSPWRLAGK 390
            + TFN+ HG  E++VRG RS FL D DYHHLTQCE+L+D+++NL ETDY+  +A+   +IP   +  A+ KLV E +FLR  A++PLA FLD+I+YE+MI+NVMLLLKGTLSGR  NELI QCHPLG+FKESTMRSIP FE++P+GY DLYQTVL+DTPVGPYFS +LQ+ A +     E+ N+LEEV+IE+IK+SL K ++EDF +   ++GGETA  MG L+K+RAD  A+NI +NS GTPLNEPAMR S R +L+PA+G+LYPAGTA LA+V DE ++   L   P+Y  ++    AG++ K+++D FYE+DVQ LE+AFEGQMHFA FYAYVKLK+QEIRNLVWI+ECILQ QKDEINKFVP+FS +S WR + K
Sbjct:    1 MATFNILHGHVESLVRGMRSSFLADADYHHLTQCETLDDVRLNLSETDYEDALADMNALIPTGLQKAAVDKLVTEFQFLRTQAIDPLAKFLDFITYEYMIENVMLLLKGTLSGRDINELIAQCHPLGMFKESTMRSIPTFESTPRGYQDLYQTVLVDTPVGPYFSMFLQETAGR----GEVSNVLEEVEIEIIKSSLIKYWIEDFAKYVDSLGGETATIMGELLKVRADTNAINITLNSFGTPLNEPAMRASDRKRLYPALGHLYPAGTAMLADVGDEDELGRVLELFPQYSSIWNIHAAGSEGKSIDDAFYERDVQMLELAFEGQMHFASFYAYVKLKEQEIRNLVWISECILQSQKDEINKFVPVFSFNSGWRASSK 375
[Close]
BLAST of NO06G03580 vs. NCBI_GenBank
Match: OWZ18202.1 (H - or Na -translocating F-type, V-type and A-type ATPase (F-ATPase) [Phytophthora megakarya])

HSP 1 Score: 486.9 bits (1252), Expect = 6.000e-134
Identity = 240/389 (61.70%), Postives = 299/389 (76.86%), Query Frame = 0 
Query:    7 VMEAGGLGTFNLDHGFPEAVVRGFRSGFLTDYDYHHLTQCESLEDMKMNLQETDYDQFMANEQH--IIPVTFRDKALQKLVQEMEFLRAHAVEPLATFLDYISYEFMIDNVMLLLKGTLSGRSANELIKQCHPLGLFKESTMRSIPAFEASPKGYADLYQTVLIDTPVGPYFSQYLQDNA--EQLSDASEMRNILEEVQIEVIKNSLHKLYLEDFYRVCQAIGGETAEFMGHLIKLRADRMAVNIAVNSIGTPLNEPAMR-STRHKLFPAVGYLYPAGTARLAEVTDEGQMEGALSAVPEYQKLYA--SIAGAKDKTLEDLFYEKDVQALEVAFEGQMHFAPFYAYVKLKQQEIRNLVWIAECILQGQKDEINKFVPIFSDSSPWRLAG 389
            VM AGG+ TFN+ HG+ E +VRGFRSGFL D DYHHLTQCESLED+K+NLQETDYDQF+A+E    I P   +     KLV+E  FLRA A+EPL  FLD+I+YE+MIDNV+LLLKGTL+GR  NELI Q HPLG F ES MRSI  FE + KGY+DLY+TVLIDTP+G YFSQ+L+++A  +++   S++RN+LEEVQ+E+IKNS+ KL+LEDFY VCQ IG ET   MG ++K RADR+A+NI +NS GTPLNEPAMR S R  L+P++G LYP  TA LAE  DE  +  AL + P Y+K++      G   K+++D FYE+DVQ  E+AF+ QMHFA FYAYVKLK+QE+RNLVWI ECI+Q Q+D IN F+PIFSDS+PWR  G
Sbjct:    2 VMAAGGISTFNIQHGYVEGLVRGFRSGFLDDVDYHHLTQCESLEDVKLNLQETDYDQFLADESSGTISPGLIQAGTTNKLVEEFHFLRAQAMEPLGQFLDFITYEYMIDNVILLLKGTLNGRDVNELIGQLHPLGKFDESIMRSICTFEPNAKGYSDLYETVLIDTPIGTYFSQFLEESAGGDRMEGTSDVRNVLEEVQMELIKNSMLKLWLEDFYNVCQEIGDETGIIMGEILKARADRIAINITLNSFGTPLNEPAMRISDRKPLYPSIGSLYPDATALLAEAGDESALGSALDSFPVYRKIWEVHQGEGVDSKSIDDAFYERDVQMAELAFQSQMHFACFYAYVKLKEQEVRNLVWICECIVQNQRDAINNFIPIFSDSAPWRGKG 390
[Close]
BLAST of NO06G03580 vs. NCBI_GenBank
Match: XP_002185659.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65129.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 485.3 bits (1248), Expect = 1.700e-133
Identity = 230/387 (59.43%), Postives = 305/387 (78.81%), Query Frame = 0 
Query:    1 MSVASDVMEAGGLGTFNLDHGFPEAVVRGFRSGFLTDYDYHHLTQCESLEDMKMNLQETDYDQFMANEQHIIPVTFRDKALQKLVQEMEFLRAHAVEPLATFLDYISYEFMIDNVMLLLKGTLSGRSANELIKQCHPLGLFKESTMRSIPAFEASPKGYADLYQTVLIDTPVGPYFSQYLQDNAEQLSDASEMRNILEEVQIEVIKNSLHKLYLEDFYRVCQAIGGETAEFMGHLIKLRADRMAVNIAVNSIGTPLNEPAMRST-RHKLFPAVGYLYPAGTARLAEVTDEGQMEGALSAVPEYQKLYA-SIAGAKDKTLEDLFYEKDVQALEVAFEGQMHFAPFYAYVKLKQQEIRNLVWIAECILQGQKDEINKFVPIFSDSSPWR 386
            M   S    AG + TFN+ HGFPEA+VRG RS FL+D DYHHLTQCE+L+D+++NL E+DY   +A+   + P + +  A++KLV E ++LR+ +VEPL+TFLD+I++E+MI+NVMLLLKG LSGR  NELI+QCHPLG+FKESTMRSIP FE S +GYADLYQTVL+DTPVGPYF+ +LQ+++E      + RN+LEEV+IE+IK+SL K +LEDFY+    IGG+T++ MG L+K+RAD  A+NI +NS GTPLNEP+MRS+ R +L+P+VG+LYPAGT  L +V DE ++   L   P+Y  +++   +G  DK+++D FYE+DVQ LE+AFE Q H+A FYAYVKLK+QEIRN+VW++ECILQ QKDEINKFVP+FS  SPWR
Sbjct:    1 MVTPSPKASAGDIATFNVLHGFPEALVRGMRSSFLSDADYHHLTQCETLDDVRLNLTESDYSDALADSATMTPASLQKAAIEKLVTEFQYLRSQSVEPLSTFLDFITFEYMIENVMLLLKGALSGRDINELIEQCHPLGMFKESTMRSIPTFENSSRGYADLYQTVLVDTPVGPYFAMFLQESSEHRD--GDSRNVLEEVEIEIIKSSLIKYWLEDFYQFAMKIGGDTSQIMGELLKVRADTNAINITLNSFGTPLNEPSMRSSDRKRLYPSVGHLYPAGTTMLIDVQDEDELGRVLELFPQYSAIWSIHASGNGDKSIDDAFYERDVQQLELAFESQFHYAVFYAYVKLKEQEIRNMVWVSECILQQQKDEINKFVPVFSYHSPWR 385
[Close]
BLAST of NO06G03580 vs. NCBI_GenBank
Match: XP_008906582.1 (hypothetical protein PPTG_12116 [Phytophthora parasitica INRA-310] >ETI45855.1 hypothetical protein F443_09649 [Phytophthora parasitica P1569] >ETK85858.1 hypothetical protein L915_09444 [Phytophthora parasitica] >ETL39285.1 hypothetical protein L916_09347 [Phytophthora parasitica] >ETL92395.1 hypothetical protein L917_09282 [Phytophthora parasitica] >ETM45704.1 hypothetical protein L914_09308 [Phytophthora parasitica] >ETN08294.1 hypothetical protein PPTG_12116 [Phytophthora parasitica INRA-310] >ETO74581.1 hypothetical protein F444_09716 [Phytophthora parasitica P1976] >ETP15730.1 hypothetical protein F441_09577 [Phytophthora parasitica CJ01A1] >ETP43773.1 hypothetical protein F442_09557 [Phytophthora parasitica P10297] >KUF92406.1 WRKY transcription factor 19 [Phytophthora nicotianae])

HSP 1 Score: 482.6 bits (1241), Expect = 1.100e-132
Identity = 237/389 (60.93%), Postives = 299/389 (76.86%), Query Frame = 0 
Query:    7 VMEAGGLGTFNLDHGFPEAVVRGFRSGFLTDYDYHHLTQCESLEDMKMNLQETDYDQFMANEQH--IIPVTFRDKALQKLVQEMEFLRAHAVEPLATFLDYISYEFMIDNVMLLLKGTLSGRSANELIKQCHPLGLFKESTMRSIPAFEASPKGYADLYQTVLIDTPVGPYFSQYLQDNA--EQLSDASEMRNILEEVQIEVIKNSLHKLYLEDFYRVCQAIGGETAEFMGHLIKLRADRMAVNIAVNSIGTPLNEPAMR-STRHKLFPAVGYLYPAGTARLAEVTDEGQMEGALSAVPEYQKLYA--SIAGAKDKTLEDLFYEKDVQALEVAFEGQMHFAPFYAYVKLKQQEIRNLVWIAECILQGQKDEINKFVPIFSDSSPWRLAG 389
            V+ AG + TFN+ HG+ E +VRGFRSGFL D DYHHLTQCESLED+K+NLQETDYDQF+A+E    I P   +     KLV+E  FLRA A+EPL  FLD+I+YE+MIDNV+LLLKGTL+GR  NELI Q HPLG F ES MRSI  FE + KGY+DLY+TVLIDTP+G YFSQ+L+++A  +++   S++RN+LEEVQ+E+IKNS+ KL+LEDFY  CQ IGG+TA  MG ++K RADR+A+NI +NS GTPLNEPAMR S R  L+P++G LYP  TA LAE  DE  +  AL + P Y+K++      G   K+++D FYE+DVQ  E+AF+ QMHFA FYAYVKLK+QE+RNLVWI ECI+Q Q+D IN F+PIFSD++PWR  G
Sbjct:    2 VVAAGDITTFNIQHGYVEGLVRGFRSGFLDDVDYHHLTQCESLEDVKLNLQETDYDQFLADESSGTISPGLIQAGTTNKLVEEFNFLRAQAMEPLGQFLDFITYEYMIDNVILLLKGTLNGRDVNELIGQLHPLGKFDESIMRSICTFEPNAKGYSDLYETVLIDTPIGTYFSQFLEESAGGDRMEGTSDVRNVLEEVQMELIKNSMLKLWLEDFYNFCQEIGGDTATIMGEILKARADRIAINITLNSFGTPLNEPAMRISDRKPLYPSIGSLYPDATAILAEAGDESSLGAALDSFPVYRKIWEVHQGEGVDSKSIDDAFYERDVQMAELAFQSQMHFACFYAYVKLKEQEVRNLVWICECIVQNQRDAINNFIPIFSDTAPWRGKG 390
[Close]
BLAST of NO06G03580 vs. NCBI_GenBank
Match: XP_002293711.1 (vacuolar proton pump D subunit [Thalassiosira pseudonana CCMP1335] >EED88720.1 vacuolar proton pump D subunit [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 481.5 bits (1238), Expect = 2.500e-132
Identity = 235/387 (60.72%), Postives = 299/387 (77.26%), Query Frame = 0 
Query:   13 LGTFNLDHGFPEAVVRGFRSGFLTDYDYHHLTQCESLEDMKMNLQETDYDQFMANEQHIIPVTFRDKALQK-----LVQEMEFLRAHAVEPLATFLDYISYEFMIDNVMLLLKGTLSGRSANELIKQCHPLGLFKESTMRSIPAFEASPKGYADLYQTVLIDTPVGPYFSQYLQDNAEQLSDASEMRNILEEVQIEVIKNSLHKLYLEDFYRVCQAIGGETAEFMGHLIKLRADRMAVNIAVNSIGTPLNEPAMR-STRHKLFPAVGYLYPAGTARLAEVTDEGQMEGALSAVPEYQKLY-ASIAGAKDKTLEDLFYEKDVQALEVAFEGQMHFAPFYAYVKLKQQEIRNLVWIAECILQGQKDEINKFVPIFSDSSPWRLAGKLNR 393
            + +FN+ HGF EA+VRG RS FLTD DYHHLTQCE+L+D+++NL ETDY   + +   +IP   +  A++K     LV E ++LR  AVEPL+TFLD+I+YE+MI+NVMLLLKGTLSGR  NELI QCHPLG+FKESTMRSIP FE+SP+GY DLYQTVL+DTPVGPYFS +LQ+ A +     E+ N+LEEV+IE+IK+SL K ++EDF R   ++GGETA  MG L+K+RAD  A+NI +NS GTPLNEPAMR S R +L+P+VG+LYPAGT+ LA+V+DE ++   L   P Y  ++    AG   K+++D FYE+DVQ LE+AFEGQMHF  FYAYVKLK+QEIRNLVW++ECILQ QK+EINKFVP+FS  +PWR   K  R
Sbjct:    1 MASFNILHGFTEALVRGMRSSFLTDADYHHLTQCETLDDVRLNLSETDYANALEDMNSLIPTGLQKAAVEKVRFVLLVTEFQYLRTQAVEPLSTFLDFITYEYMIENVMLLLKGTLSGRDINELIAQCHPLGMFKESTMRSIPTFESSPRGYQDLYQTVLVDTPVGPYFSLFLQETAMR----GEVSNVLEEVEIEIIKSSLIKYWIEDFARFVDSLGGETATIMGDLLKVRADTNAINITLNSFGTPLNEPAMRASDRKRLYPSVGHLYPAGTSMLADVSDEDELGRVLELFPLYSSIWNVHAAGGDGKSIDDAFYERDVQMLELAFEGQMHFGAFYAYVKLKEQEIRNLVWVSECILQQQKEEINKFVPVFSFHAPWRAGSKSRR 383
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BLAST of NO06G03580 vs. NCBI_GenBank
Match: XP_002896603.1 (H - or Na -translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily [Phytophthora infestans T30-4] >EEY66973.1 H - or Na -translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily [Phytophthora infestans T30-4])

HSP 1 Score: 481.1 bits (1237), Expect = 3.300e-132
Identity = 237/389 (60.93%), Postives = 297/389 (76.35%), Query Frame = 0 
Query:    7 VMEAGGLGTFNLDHGFPEAVVRGFRSGFLTDYDYHHLTQCESLEDMKMNLQETDYDQFMANE--QHIIPVTFRDKALQKLVQEMEFLRAHAVEPLATFLDYISYEFMIDNVMLLLKGTLSGRSANELIKQCHPLGLFKESTMRSIPAFEASPKGYADLYQTVLIDTPVGPYFSQYLQDNA--EQLSDASEMRNILEEVQIEVIKNSLHKLYLEDFYRVCQAIGGETAEFMGHLIKLRADRMAVNIAVNSIGTPLNEPAMR-STRHKLFPAVGYLYPAGTARLAEVTDEGQMEGALSAVPEYQKLYA--SIAGAKDKTLEDLFYEKDVQALEVAFEGQMHFAPFYAYVKLKQQEIRNLVWIAECILQGQKDEINKFVPIFSDSSPWRLAG 389
            V  AG + TFN+ HG+ E +VRGFRSGFL D DYHHLTQCESLED+K+NLQETDYDQF+A+E    I P   +     KLV+E  FLRA A+EPL  FLD+I+YE+MIDNV+LLLKGTL+GR  NELI Q HPLG F ES MRSI  FE + KGY+DLY+TVLIDTP+G YFSQ+L+++A  +++   S++RN+LEEVQ+E+IKNS+ KL+LEDFY  CQ IGG+TA  MG ++  RADR+A+NI +NS GTPLNEPAMR S R  L+P++G LYP  TA LAE  DE  +  AL + P Y+K++      G   K+++D FYE+DVQ  E+AF+ QMHFA FYAYVKLK+QE+RNLVWI ECI+Q Q+D IN F+PIFSDS+PWR  G
Sbjct:    2 VAAAGDISTFNIQHGYVEGLVRGFRSGFLDDVDYHHLTQCESLEDVKLNLQETDYDQFLADESSSSISPGLIQTGTSNKLVEEFNFLRAQAMEPLGEFLDFITYEYMIDNVILLLKGTLNGRDVNELIGQLHPLGKFDESIMRSICTFEPNAKGYSDLYETVLIDTPIGTYFSQFLEESAGGDRMEGTSDVRNVLEEVQMELIKNSMLKLWLEDFYDFCQEIGGDTATIMGEILTARADRIAINITLNSFGTPLNEPAMRISDRKPLYPSIGSLYPDATALLAEAGDESSLGAALDSFPVYRKIWEVHQGEGVDSKSIDDAFYERDVQMAELAFQSQMHFACFYAYVKLKEQEVRNLVWICECIVQNQRDAINNFIPIFSDSAPWRGKG 390
The following BLAST results are available for this feature:
BLAST of NO06G03580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009033412.14.400e-14565.86hypothetical protein AURANDRAFT_59824 [Aureococcus... [more]
CBN76508.18.100e-13960.15conserved unknown protein [Ectocarpus siliculosus][more]
GAY06361.11.400e-13562.08H or Na translocating Ftype putative, partial [Pyt... [more]
GAY03534.11.400e-13562.08leucine-tRNA ligase [Pythium insidiosum][more]
EJK75011.16.000e-13461.74hypothetical protein THAOC_03282 [Thalassiosira oc... [more]
OWZ18202.16.000e-13461.70H - or Na -translocating F-type, V-type and A-type... [more]
XP_002185659.11.700e-13359.43predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_008906582.11.100e-13260.93hypothetical protein PPTG_12116 [Phytophthora para... [more]
XP_002293711.12.500e-13260.72vacuolar proton pump D subunit [Thalassiosira pseu... [more]
XP_002896603.13.300e-13260.93H - or Na -translocating F-type, V-type and A-type... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR029ncniR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000122NSK000122Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03580.1NO06G03580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597710gene_6684Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100031g1gene4175Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03580.1NO06G03580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03580 ID=NO06G03580|Name=NO06G03580|organism=Nannochloropsis oceanica|type=gene|length=3290bp
GAGGAGGACAAGAAGGCGCGCCCTTTGGTTGTGATAAATTTGAGTGGTTC
AGAAGTCGTGCGGGTTCGTCTACTTGAAAGTTGTTGTTTGCGCTTGCCGC
CGCCGTTTCAGCCATGCTGATGGGATGTGCGCATGTCGAGACAATGTTCA
TGACTGAATATACCCGCTCCAGCCCGCATTACGCTCTCCCCGTCCATGAC
GGTCAAAGTTTTCAGATGTATTACATGTTTGGGTGCGAGTTTCGAGGGGC
CTGAAGGTCCCGAAGGGTCAGGGCCGCGACATTTGCCCATCTCCCTCCCT
GTAACACGAGGAGATGCATTTTGGGAGAGGGGATATCGCCATGGTCTCAC
GTCTGTCTTTCCATCCGTACACTTACTTGACACAGGGCACATTCCTTCGT
AGTTGCAGTAGCAGCAGCAACCCTAGCAGCAGCGGGGAAGGTGCTTGTTT
ATTTGTGACCCGACCCGCGTACTCAGACGACGAGGACAAGGACGGCAAGA
AGAAGGGAGACAGGAGCGAATCAATTTGGACTTGTCCCACCCTAAAGCAC
TACATAACCAGCGAACATGTCGGTGGCATCAGACGTGATGGAGGCCGGTG
GGCTTGGGACCTTCAATTTGGATCATGGCTTTCCCGAGGCAGTGGTGCGA
GGCTTTCGCTCGGGCTTCCTAACGGATTATGATTACCATCATCTCACCCA
Ggtacgttgtggcggtattcagaaggacagggggaatggaacgggaaggg
acgaaatgacacaggatgtgagcgcgttatgagattggatggatggagcc
tagagagacgaccattttgccaatcgataattgcttgccttctttaaacg
cgagactcaaccggccttcctcaatccctcccgacttcttccctccctct
gggaagTGCGAGTCCTTGGAAGACATGAAGATGAATCTCCAAGAGACAGA
CTACGACCAGTTCATGGCCAATGAGCAACACATCATTCCCGTCACCTTTC
GTGACAAGGCCCTCCAGAAGCTCGTGCAGGAAATGGAGTTTCTGCGGGCG
CACGCCGTGGAGCCCTTGGCGACGTTTCTTGATTACATTTCATACGAATT
CATGATTGATAACGTGATGCTTCTATTGAAGGGGACCTTGTCGGGACGCA
GTGCGAATGAATTGATCAAGCAGTGCCACCCGTTGGGGTTGTTCAAGGAG
AGCACCATGCGCTCAATCCCGGCATTTGAGGCTTCTCCTAAAGGGTACGC
AGACCTGTACCAGACCGTGTTAATTGACACTCCCGTTGGACCGTATTTTA
GTCAGTACCTGCAGGACAATGCCGAGCAATTGAGTGATGCTTCCGAGATG
AGGAATATACTGGAGGAGGTGCAGATTGAGgtaggcctggcgggacgggg
gaagggaggggggaagaggaagctgtcacgcattcatccaaggctttgta
ctcacccgtacatcccccccgccctcccttcttccctccatcccgtttcc
ctttcgtctcaccgtctaccctcagGTGATCAAAAACTCCCTGCACAAGC
TGTACCTCGAGGACTTCTACCGCGTCTGCCAGGCCATCGGGGGTGAGACG
GCCGAGTTCATGGGCCATTTGATCAAGCTCCGCGCCGACCGGATGGCCGT
TAACATTGCCGTTAACAGgtacgcccctctccccctccctccctttttct
cttgcttgcttcttgtttgacagagagacggctgagctgcattcgacatc
cctctcaggaaggacgtcctcccttcctcctttcctccaccccctggtcc
atcacgcagtctcaccccccctcttcccctcttccctccctccctccccc
aagCATCGGTACCCCCCTCAACGAGCCGGCCATGCGCTCCACCCGCCATA
AACTCTTCCCTGCCGTCGGCTACCTCTACCCCGCAGGCACTGCCCGCCTG
GCCGAGGTCACGGACGAAGGACAGATGGAAGGGGCCTTAAGCGCTGTGCC
TGAGTACCAGAAGCTGTATGCTTCCATCGCGGGGGCAAAGgtacgtcgtt
ggctttccctccctccattcctctctccctccctctcttcctccctcgcc
ctctcactgttttctagaccgtggcagttgagggctgccagtcgtttgaa
ttcgtcgtggcgttgtctcaacactcccgctcgctccctcccctcctccc
tcagGACAAGACGCTGGAGGACTTGTTCTACGAGAAGGATGTTCAGGCCC
TGGAGGTGGCCTTCGAGGGGCAGATGCACTTTGCTCCTTTCTACGCCTAC
GTCAAGCTGAAGCAGCAAGAGATCAGgtagggtgagagggagggaggggg
ggagggacagaggaaagagtgagtgtcacgtagaggggctgccacgtcat
gtctggccgtgacagacagtgtcatttaccgcctacccctccctccctcc
ctccctccctccctccctccctccctccctttctcagAAACCTGGTCTGG
ATCGCCGAGTGCATCCTGCAAGGGCAGAAGGACGAAATTAACAAATTCGT
TCCGATCTTTTCCGACTCATCCCCCTGGCGACTGGCCGGGAAGTTGAATC
GCTAAGAAGCAAGAGGGAGGGAGGGAGGGAGGGAGGGACGGCCGGACGGA
GAAAGGGAGGAGAGAAGTGGAAAAGAGTTGTGTGTGTTGATGTAGATGTG
AAGATAAACAAGATTTGGGTTTCAAATTTTTAATAGATTGAAGAAATAGG
GGAAAGGGGAAAAAGAGAAGAGAAGAGGGTGAGAAAGAGCGCGCGCGTGA
AGAGGCGGTGGAGGAGAAATATGGAGGGGAGGAACAGAGGGAAGGAGAGG
ACGGCGACCGTGGGTGCACTCAGTGGGTGCACTCAGTATATCCACTAAAA
AGGGAGAGGAGAGGAAAGAAGAGAGGGACTGAGGGAGAACAAAGAGCTCG
TCAAAGGCAAAGAAAGAGCGCTACCATTACACTCGGCGTGATGATGGCCA
TGACCTACTCCCAGCCACTCATTCCCCCCCCACATCATGCATATACCACC
ACCCACACAGTACGTACACCCTTAAAGTCCATATGCACCAAAAGCAGACT
GTTAACGTTGTTGCTTATTACATTTCCCTAAATTTCGCCATACAACTACT
CATTCAATTACCCTGTATTCGCCATCCGACACAACCACGTCCTCTTCCGT
CCGTTGATTTCTTCATCGTTACCATCGCCACAGATGCCGATAATTACCAT
TGCTTATGAGTATGCAAAGTTAATGAAGCTATGTACATTC
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protein sequence of NO06G03580.1

>NO06G03580.1-protein ID=NO06G03580.1-protein|Name=NO06G03580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=393bp
MSVASDVMEAGGLGTFNLDHGFPEAVVRGFRSGFLTDYDYHHLTQCESLE
DMKMNLQETDYDQFMANEQHIIPVTFRDKALQKLVQEMEFLRAHAVEPLA
TFLDYISYEFMIDNVMLLLKGTLSGRSANELIKQCHPLGLFKESTMRSIP
AFEASPKGYADLYQTVLIDTPVGPYFSQYLQDNAEQLSDASEMRNILEEV
QIEVIKNSLHKLYLEDFYRVCQAIGGETAEFMGHLIKLRADRMAVNIAVN
SIGTPLNEPAMRSTRHKLFPAVGYLYPAGTARLAEVTDEGQMEGALSAVP
EYQKLYASIAGAKDKTLEDLFYEKDVQALEVAFEGQMHFAPFYAYVKLKQ
QEIRNLVWIAECILQGQKDEINKFVPIFSDSSPWRLAGKLNR*
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Synonyms
Publications