NO06G03550, NO06G03550 (gene) Nannochloropsis oceanica

Overview
NameNO06G03550
Unique NameNO06G03550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1287
Alignment locationchr6:977021..978307 +

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial carrier
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:977021..978307 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
IPR002067Mit_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO06G03550 vs. NCBI_GenBank
Match: EWM26343.1 (mitochondrial carrier [Nannochloropsis gaditana])

HSP 1 Score: 465.7 bits (1197), Expect = 1.400e-127
Identity = 251/375 (66.93%), Postives = 276/375 (73.60%), Query Frame = 0
Query:    3 GGEEVAAAGSSNQFLESMLASATAGVISRILCHPLDTCKARLQNPGSEFSGTLQVVRQTLRHEGIGGLYRGLGTVISIGTPAFVLYLTTYEQAKKAFLGMPALQDNYEFVGHFGAGMAAETVSCLIYVPVDVVKERLQVQRRLRSGQEISGTLPMYRGTWHALSTIMQTEGLRGVYRGYGATLLSFGPFSAFYFLFYEKFKQWSATSVGLATQEDLPFHLTLASAAGAGSLASFITNPVDLVRLRLQVQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNN-SSIHGHHSHPMPSIXXXXXXXXXXXXXXXXXXXXXXXHNTLDGLTKVYRREGFHGLFKGSGARIAFYTPSTMISMSVYDTLKREFHHLLS 377
            GGEEV  + S  QFLESMLASATAGVISRILCHPLDTCKARLQNPGSEF+ TLQV RQTL+ EG+GGLYRGLGTV+SIGTPAF+LYL TYE AKK  L +PALQ +Y+FVGHF AGMAAET SCLIYVPVDVVKERLQVQRRL +G+EI G+LPMYRGTWHALSTI + EGLRGVYRGYGATLLSFGPFSAFYF+FYE FK W    + L   E LPFH+TLASAA AG+LAS ITNP+DLVRLRLQVQRGS                               + + +HG  + P PS                        HNTLDGL KVY REGF GLFKGSGARIAF+TPSTMISM+VYDTLK E H+LLS
Sbjct:    5 GGEEVDTS-SYTQFLESMLASATAGVISRILCHPLDTCKARLQNPGSEFTSTLQVFRQTLQQEGLGGLYRGLGTVVSIGTPAFMLYLATYEYAKKLCLSIPALQHDYQFVGHFSAGMAAETASCLIYVPVDVVKERLQVQRRLLNGREIPGSLPMYRGTWHALSTIARQEGLRGVYRGYGATLLSFGPFSAFYFVFYETFKGWGLRHLRLDKAETLPFHMTLASAASAGALASLITNPMDLVRLRLQVQRGSSLPPLTPALHSSPAPFASFPSSTGASWTGVGSPAQVHGAPTAP-PS---HLPMVKGERVADTAAIVREQYHNTLDGLIKVYNREGFRGLFKGSGARIAFFTPSTMISMTVYDTLKGEIHNLLS 374          
BLAST of NO06G03550 vs. NCBI_GenBank
Match: GAX15094.1 (hypothetical protein FisN_12Lh209 [Fistulifera solaris])

HSP 1 Score: 243.0 bits (619), Expect = 1.400e-60
Identity = 147/364 (40.38%), Postives = 196/364 (53.85%), Query Frame = 0
Query:   14 NQFLESMLASATAGVISRILCHPLDTCKARLQ---NPGSEFSGTLQVVRQTLRHEGIGGLYRGLGTVISIGTPAFVLYLTTYEQAKKAFLGMPALQDNYEFVGHFGAGMAAETVSCLIYVPVDVVKERLQVQRRLRSGQEISGTLPMYRGTWHALSTIMQTEGLRGVYRGYGATLLSFGPFSAFYFLFYEKFKQWSATSVGLATQEDL--------PFHLTLASAAGAGSLASFITNPVDLVRLRLQVQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSSIHGHHSHPMPSIXXXXXXXXXXXXXXXXXXXXXXXHNTLDGLTKVYRREGFHGLFKGSGARIAFYTPSTMISMSVYDT 367
            +  L ++LAS  AG+I+RI  HPLDT KARLQ   N   ++ GT  V+R+TLR EGI G YRG G V+  GTP   +YL  YE AKK   G+       +FV HF AGM AET++C+IYVPVDVVKER+QVQ +        G   MYR +W AL  I  TEGL G+Y+GY ATL SFGPFSA YF+ YE+FK W+   +  +   +L        PFH  L  ++ AG+LAS++T+P+D+V+LRLQVQRG                               +NS+I   +                              +   D   K YR  G  GL++G+GAR+ +  P+T I+M+ Y+T
Sbjct:    5 SSLLVNVLASGMAGIIARIFTHPLDTAKARLQAVSNTQQQYQGTADVLRKTLRTEGIRGFYRGFGAVLVGGTPGTAIYLCGYEAAKK---GLAEQYRGNDFVIHFTAGMIAETLACIIYVPVDVVKERMQVQHK------TGGGALMYRNSWDALQKIAATEGLAGIYKGYAATLGSFGPFSALYFVCYERFKYWTRLHLTQSNHSELRELEHIEVPFHWLLVCSSSAGALASWVTSPLDMVKLRLQVQRG----------------------------IDHSNSNIAATY------------------------------NGVWDCWQKTYRAGGLAGLWRGAGARVLYTVPATTITMTSYET 301          
BLAST of NO06G03550 vs. NCBI_GenBank
Match: OEU18960.1 (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 241.1 bits (614), Expect = 5.500e-60
Identity = 147/386 (38.08%), Postives = 205/386 (53.11%), Query Frame = 0
Query:   11 GSSNQFLESMLASATAGVISRILCHPLDTCKARLQN-PGSEFSGTLQVVRQTLRHEGIGGLYRGLGTVISIGTPAFVLYLTTYEQAKKAFLGMPALQDNYE-FVGHFGAGMAAETVSCLIYVPVDVVKERLQVQRRLRSGQEISGTLPMYRGTWHALSTIMQTEGLRGVYRGYGATLLSFGPFSAFYFLFYEKFKQWSATSV----------GLATQED---------LPFHLTLASAAGAGSLASFITNPVDLVRLRLQVQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSSIHGHHSHPMPSIXXXXXXXXXXXXXXXXXXXXXXXHNTLDGLTKVYRREGFHGLFKGSGARIAFYTPSTMISMSVYDTLKREFHHLL 376
            G +   + ++L SA+AG+++R+  HPLDT KARLQ+  G  + G + V+R T R+EG+ GLYRG GTVI  GTP  ++YL +Y+  K         ++N E FV HF AG+ AETV+CLIYVPVDV+KERLQ Q +       + T+  Y G W AL  I +TEGL G+Y+GYGATL S+GPFSAFYF+FYE+FK WS   +           ++T  D         LP   T+  +A AG++ASF+T+P+D+V+LRLQVQRG+                                       +H + S+                           D L   +R  G  GLFKG+GAR+  + P T ++M+ Y+  +  FH  L
Sbjct:    4 GINTSIVSNVLGSASAGILARVATHPLDTAKARLQSLNGVSYKGPVDVLRSTFRYEGVRGLYRGFGTVIIGGTPGTIIYLCSYDIFKDKISSSAFNKNNEENFVVHFMAGILAETVACLIYVPVDVIKERLQTQYK-------TDTI-KYNGGWDALVKISKTEGLSGIYKGYGATLASYGPFSAFYFVFYEQFKSWSKNYIQQKEEKNNDSTISTAADNTMXXXXXXLPLSYTILCSASAGAIASFLTSPLDMVKLRLQVQRGA---------------------------------------AHQLSSM----------------NTNTPSYRGMSDALAYAWRTGGIAGLFKGAGARVLHFVPLTTVTMTSYEACRIFFHQKL 326          
BLAST of NO06G03550 vs. NCBI_GenBank
Match: GAY00457.1 (Hypothetical protein PINS_008302 [Pythium insidiosum])

HSP 1 Score: 238.8 bits (608), Expect = 2.700e-59
Identity = 152/379 (40.11%), Postives = 202/379 (53.30%), Query Frame = 0
Query:    1 MEGGEEVAAAGSSNQFLESMLASATAGVISRILCHPLDTCKARLQ----NPGSEFSGTLQVVRQTLRHEGIGGLYRGLGTVISIGTPAFVLYLTTYEQAKKAFLGMPALQDNYEFVGHFGAGMAAETVSCLIYVPVDVVKERLQVQRRLRSGQEISGTLPMYRGTWHALSTIMQTEGLRGVYRGYGATLLSFGPFSAFYFLFYEKFKQWSATSVGLATQEDLPFHLTLASAAGAGSLASFITNPVDLVRLRLQVQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSSIHGHHSHPMPSIXXXXXXXXXXXXXXXXXXXXXXXHNTLDGLTKVYRREGFHGLFKGSGARIAFYTPSTMISMSVYDTLKREFHHLL 376
            M G      A S  + + ++L SATAG+I RI CHP+DT KARLQ    +    F   LQ+   +L H  + GLYRGLG  +    PA  LYLT+YE +K     MP  +DN   + + GAGM AE +SC+++VP+DV+KER+QVQ    +   +S     YR T+HA+ TIMQTE + G+Y+GY ATLLSFGPFSA YF+FYEK K   A        EDL    TL SAA AG+ ASFITNP+D+++LRLQVQR                                  SS+                                  +   DGL  V R EG   L+KG+GAR+AF+ PST I+MS++++ +R + +LL
Sbjct:    1 MGGAPAANGAKSFQEQIPTLLGSATAGMIGRIFCHPIDTVKARLQASTASXHGGFRAHLQLHNFSLAH--LRGLYRGLGVSMVGSAPATCLYLTSYEVSKDTLHAMPVFRDNPSLL-YLGAGMLAEALSCVLWVPIDVIKERMQVQTPSSASGPVSRV--YYRNTFHAVQTIMQTERIAGLYKGYAATLLSFGPFSALYFMFYEKNK---ALMQQYLNTEDLAPQYTLISAASAGAAASFITNPLDMIKLRLQVQRA----------------------------YAAEGSSV--------------------------------VYNGIADGLAHVIRTEGVMALYKGAGARVAFHAPSTAITMSLFESCRRFYANLL 311          
BLAST of NO06G03550 vs. NCBI_GenBank
Match: GAX23636.1 (hypothetical protein FisN_12Hh209 [Fistulifera solaris])

HSP 1 Score: 236.9 bits (603), Expect = 1.000e-58
Identity = 144/366 (39.34%), Postives = 193/366 (52.73%), Query Frame = 0
Query:   14 NQFLESMLASATAGVISRILCHPLDTCKARLQ-----NPGSEFSGTLQVVRQTLRHEGIGGLYRGLGTVISIGTPAFVLYLTTYEQAKKAFLGMPALQDNYEFVGHFGAGMAAETVSCLIYVPVDVVKERLQVQRRLRSGQEISGTLPMYRGTWHALSTIMQTEGLRGVYRGYGATLLSFGPFSAFYFLFYEKFKQWSATSVGLATQEDL--------PFHLTLASAAGAGSLASFITNPVDLVRLRLQVQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSSIHGHHSHPMPSIXXXXXXXXXXXXXXXXXXXXXXXHNTLDGLTKVYRREGFHGLFKGSGARIAFYTPSTMISMSVYDT 367
            +  L ++LAS  AG+I+R+  HPLDT KARLQ          + GT+ V+R+TLR EGI G YRG G V+  GTP   +YL  YE AKK   G+       +FV HF AGM AET++C+IYVPVDVVKER+QVQ +       +G    YR +W AL  I  TEGL G+Y+GY ATL SFGPFSA YF+ YE+FK W+   +  +   +L        PFH  L  ++ AG+LAS++T+P+D+V+LRLQVQRG                               N SS +                                 +   D   K YR  G  GL++G+GAR+ +  P+T I+M+ Y+T
Sbjct:    5 SSLLVNVLASGMAGIIARVFTHPLDTAKARLQAVYTTQQEQHYRGTVDVLRKTLRTEGIQGFYRGFGAVLVGGTPGTAIYLCGYEAAKK---GLAEQYRGNDFVIHFTAGMIAETLACIIYVPVDVVKERMQVQHK-------TGGKLTYRNSWDALQKIAATEGLTGIYKGYAATLGSFGPFSALYFVCYERFKYWTRLHLTQSNNRELRELEHIEVPFHWLLVCSSSAGALASWVTSPLDMVKLRLQVQRG-------------------------MDHSNRNTSSTY---------------------------------NGVWDCWQKTYRAGGLAGLWRGAGARVLYTVPATTITMTSYET 302          
BLAST of NO06G03550 vs. NCBI_GenBank
Match: XP_008912474.1 (hypothetical protein PPTG_16747 [Phytophthora parasitica INRA-310] >ETI36787.1 hypothetical protein F443_17133 [Phytophthora parasitica P1569] >ETK76996.1 hypothetical protein L915_16675 [Phytophthora parasitica] >ETL30439.1 hypothetical protein L916_16581 [Phytophthora parasitica] >ETL83665.1 hypothetical protein L917_16403 [Phytophthora parasitica] >ETM36859.1 hypothetical protein L914_16510 [Phytophthora parasitica] >ETN02091.1 hypothetical protein PPTG_16747 [Phytophthora parasitica INRA-310] >ETO65507.1 hypothetical protein F444_17175 [Phytophthora parasitica P1976] >ETP06610.1 hypothetical protein F441_17007 [Phytophthora parasitica CJ01A1] >ETP34694.1 hypothetical protein F442_17008 [Phytophthora parasitica P10297])

HSP 1 Score: 233.4 bits (594), Expect = 1.100e-57
Identity = 145/362 (40.06%), Postives = 204/362 (56.35%), Query Frame = 0
Query:   17 LESMLASATAGVISRILCHPLDTCKARLQ---NPGSEFSGTLQVVRQTLRHEGIGGLYRGLGTVISIGTPAFVLYLTTYEQAKKAFLGMPALQDNYEFVGHFGAGMAAETVSCLIYVPVDVVKERLQVQRRLRSGQEISGTLPMYRGTWHALSTIMQTEGLRGVYRGYGATLLSFGPFSAFYFLFYEKFKQWSATSVGLATQEDLPFHLTLASAAGAGSLASFITNPVDLVRLRLQVQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSSIHGHHSHPMPSIXXXXXXXXXXXXXXXXXXXXXXXHNTLDGLTKVYRREGFHGLFKGSGARIAFYTPSTMISMSVYDTLKREFHHLL 376
            L ++L SATAG+I R+ CHPLDT KARLQ     G   +  L +   +L+H  + GLYRG+G  +    PA  LY+T+YE +K A +G+ +   +   + + GAGMAAE +SC+++VP+DV+KER+QVQ +  S    SG +  YR T  A+ TI +TE + G+Y+GY ATLLSFGPFSA YF+FYEK K ++   + +   ++LP   TLASAA AG+ ASF+TNP+DL++LRLQVQR                                       + S   P+                            DGLT+V R EG   L+KG+GAR+AF+ PST I+MS++++ +R F  LL
Sbjct:   13 LPTLLGSATAGMIGRVFCHPLDTVKARLQASTTTGQTITSQLNLRSFSLQH--LRGLYRGMGVSMLGSAPATCLYMTSYEVSKDALMGIESFHGSPTLL-YLGAGMAAEALSCVLWVPIDVIKERMQVQGQSSSA---SGKI-YYRNTLDAMQTIARTERIAGLYKGYVATLLSFGPFSALYFMFYEKAKAFAQKRLDM---QELPAQYTLASAAVAGATASFLTNPLDLIKLRLQVQR--------------------------------------AYASEGTPA----------------------AYRGIADGLTQVIRTEGILALYKGAGARVAFHAPSTAITMSLFESCRRVFASLL 304          
BLAST of NO06G03550 vs. NCBI_GenBank
Match: XP_002181224.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47147.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 231.9 bits (590), Expect = 3.300e-57
Identity = 145/372 (38.98%), Postives = 195/372 (52.42%), Query Frame = 0
Query:   17 LESMLASATAGVISRILCHPLDTCKARLQ-NPGSEFSGTLQVVRQTLRHEGIGGLYRGLGTVISIGTPAFVLYLTTYEQAKKAF-------LGMPALQDNYEFVGHFGAGMAAETVSCLIYVPVDVVKERLQVQRRLRSGQEISGTLPMYRGTWHALSTIMQTEGLRGVYRGYGATLLSFGPFSAFYFLFYEKFKQWSATSV---------GLATQEDLPFHLTLASAAGAGSLASFITNPVDLVRLRLQVQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSSIHGHHSHPMPSIXXXXXXXXXXXXXXXXXXXXXXXHNTLDGLTKVYRREGFHGLFKGSGARIAFYTPSTMISMSVYDTLKREF 372
            L ++L SA AG+I+RI  HPLDT KARLQ      F G +  + QT R EGI GLYRG G VI  GTP  VLYL +Y+  KK         +  P      +F  HF AGM AET++C+IYVPVDVVKER+QVQ+ L+S          Y+ +W A   I ++EG+ G+Y+GY ATL SFGPFSA YF+FYEK K+ S   V               +LPF   +  +AGAG+LAS++T+P+D+ +LRLQVQRG                               N SS+      P+ S                            D L + ++R+GF GLF+G+GAR+  + P+T I+M+ Y+  +  F
Sbjct:   10 LPNVLGSACAGIIARISTHPLDTTKARLQAQSAPRFRGPVDALAQTARAEGITGLYRGFGAVIIGGTPGTVLYLCSYDFVKKGLSQAWESRMNQPMEGTGADFAVHFTAGMLAETIACIIYVPVDVVKERMQVQQGLQSSPS------AYKSSWDAFQKIARSEGITGIYKGYTATLGSFGPFSALYFVFYEKLKRSSCQYVSREPYTISGSSGRNTELPFPWVVGCSAGAGALASWLTSPLDMAKLRLQVQRG---------------------------HIAQNASSL-----APVTS-----------------------YRGVWDCLKQAHKRDGFRGLFRGAGARVLHFAPATTITMTSYEMCRSLF 320          
BLAST of NO06G03550 vs. NCBI_GenBank
Match: CBJ26620.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 225.7 bits (574), Expect = 2.400e-55
Identity = 158/416 (37.98%), Postives = 203/416 (48.80%), Query Frame = 0
Query:   18 ESMLASATAGVISRILCHPLDTCKARLQNP-GSEFSGTLQVVRQTLRHEGIGGLYRGLGTVISIGTPAFVLYLTTYEQAKK------AFLGMPALQDNYEFVGHFGAGMAAETVSCLIYVPVDVVKERLQVQR--------RLRSGQEISG--------------TLPMYRGTWHALSTIMQTEGLRGVYRGYGATLLSFGPFSAFYFLFYEKFKQWS--------------------ATSVGLATQE---------DLPFHLTLASAAGAGSLASFITNPVDLVRLRLQVQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSSIHGHHSHPMPSIXXXXXXXXXXXXXXXXXXXXXXXHNTLDGLTKVYRREGFHGLFKGSGARIAFYTPSTMISMSVYDTLKREFHHLL 376
            ++ L SAT+G+++R+LCHPLDT KARLQ P GS F  T  V+R T+  E I GLYRG+G V   G P   LYLTTYE  K+      A  G  A       + H  AGM AE V C+++VPVDVVKERLQVQR         + + +  SG              ++P YRG+   L TI++TEGLRG+Y+GY ATL SFGPFSA YF+FYE+ K  S                    A     AT E         +LP  +TL +AA A + AS++TNP+DL +LRLQVQRG+                                       S P P++                          LD L + YR  G  GLFKGSGAR+AF  PS  I+M+ ++  K  +  LL
Sbjct:    9 DTCLGSATSGLVARLLCHPLDTAKARLQGPEGSSFRNTWHVLRATMGTERIRGLYRGIGAVTFGGVPGVCLYLTTYEATKELLADRGAIGGGDAESGGEGILTHLTAGMMAEVVCCVVFVPVDVVKERLQVQRPAGAAAAKYVSTAEASSGGXXXXXXXXGVREASVPPYRGSADTLKTILRTEGLRGIYKGYLATLASFGPFSALYFMFYEQAKMASQDLIERHPYFRGQGGTDARAAEGAATATTEGQSARGGRAELPVWMTLGNAAAASAAASWLTNPLDLAKLRLQVQRGAAATA-----------------------------------SQP-PAVATTAATAPYT--------------GMLDALRRSYRAGGLAGLFKGSGARMAFQAPSIGITMAAFEKSKEMWGSLL 374          
BLAST of NO06G03550 vs. NCBI_GenBank
Match: XP_008880806.1 (hypothetical protein H310_14681 [Aphanomyces invadans] >ETV90556.1 hypothetical protein H310_14681 [Aphanomyces invadans])

HSP 1 Score: 225.7 bits (574), Expect = 2.400e-55
Identity = 134/351 (38.18%), Postives = 189/351 (53.85%), Query Frame = 0
Query:   19 SMLASATAGVISRILCHPLDTCKARLQNPGS-EFSGTLQVVRQTLRHEGIGGLYRGLGTVISIGTPAFVLYLTTYEQAKKAFLGMPALQDNYEFVGHFGAGMAAETVSCLIYVPVDVVKERLQVQRRLRSGQEISGTLPMYRGTWHALSTIMQTEGLRGVYRGYGATLLSFGPFSAFYFLFYEKFKQWSATSVGLATQEDLPFHLTLASAAGAGSLASFITNPVDLVRLRLQVQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSSIHGHHSHPMPSIXXXXXXXXXXXXXXXXXXXXXXXHNTLDGLTKVYRREGFHGLFKGSGARIAFYTPSTMISMSVYDTLK 369
            +ML SA AG+++R++CHPLD  KA LQ  G   +  +  V++ T + EG+ GLYRG G ++    PA  LYLT+Y+Q+K+     PA Q N  FV  F AG+ AE +SC+ +VP+DV+KER+QVQR+   G         Y+    A  TI +TEG+RG+YRGYGATL SFGPFSAF+FLFYEK K   A +  +   +D+PF   LA +  A + AS +TNP+DLV+LR+Q++R                                          HP  +                         NT   L +V R+EGF GL+KG GAR+AF  P T +++++++  K
Sbjct:   17 TMLGSAMAGILARVVCHPLDVAKANLQVAGQVAYRNSYHVLQSTFQKEGVRGLYRGFGVILLGSAPATCLYLTSYDQSKRWLESHPAFQSNV-FVTSFSAGVMAEALSCVFWVPIDVIKERMQVQRKTGGG-------VFYKNAVDAWRTIARTEGVRGLYRGYGATLWSFGPFSAFFFLFYEKNK---AVAEAVHGTDDVPFASLLACSVTASAGASIVTNPLDLVKLRMQIER---------------------------------------MQQHPTAA----------------------TYQNTFQALQRVARKEGFVGLWKGVGARVAFQAPLTGLTLALFEKCK 295          
BLAST of NO06G03550 vs. NCBI_GenBank
Match: OQR92131.1 (inorganic diphosphatase [Achlya hypogyna])

HSP 1 Score: 225.3 bits (573), Expect = 3.100e-55
Identity = 137/365 (37.53%), Postives = 195/365 (53.42%), Query Frame = 0
Query:    9 AAGSSNQ---FLESMLASATAGVISRILCHPLDTCKARLQNPGSEFSGTLQVVRQTLRHEGIGGLYRGLGTVISIGTPAFVLYLTTYEQAKKAFLGMPALQDNYEFVGHFGAGMAAETVSCLIYVPVDVVKERLQVQRRLRSGQEISGTLPMYRGTWHALSTIMQTEGLRGVYRG--YGATLLSFGPFSAFYFLFYEKFKQWSATSVGLATQEDLPFHLTLASAAGAGSLASFITNPVDLVRLRLQVQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNSSIHGHHSHPMPSIXXXXXXXXXXXXXXXXXXXXXXXHNTLDGLTKVYRREGFHGLFKGSGARIAFYTPSTMISMSVYDTLK 369
            AAG S Q      +ML SA AG++ R++CHP+D  KA LQ  G ++ G   V+  TL  EG+ GLY+G G ++    PA  LY+T+YE++KK  L  P +Q +  F+  F AG+ AE  SC+ +VP+DVVKER+QVQR  ++G         Y+ TWHAL TI +TEGLRG+Y+G  YGAT+ SFGP+SA +F+ YE+ K   A +  L   +++PF   L  +  A + A+F+TNP+DLV+LRLQV+R                                         S   P                          NTL GL ++   +G  GL+KG+GAR+AF  P T I++++Y+  K
Sbjct:    4 AAGDSAQPASMAATMLGSAMAGILGRVVCHPMDMAKANLQVHG-QYRGAWHVITSTLHAEGVRGLYKGFGVIVLGSAPATCLYVTSYEESKKWLLQYPVMQTS-PFLSSFTAGIFAEAFSCVFWVPIDVVKERMQVQRTHQAG--------AYKNTWHALQTIARTEGLRGMYKGKRYGATMWSFGPYSALFFVAYEQNK---AAAQRLHATDNVPFASLLLCSVSASAAAAFLTNPLDLVKLRLQVER------------------------------------FQSAQSQAAPK-----------------------YSNTLQGLQRILAEDGIRGLWKGAGARVAFQAPLTGITIAIYEKCK 296          
The following BLAST results are available for this feature:
BLAST of NO06G03550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26343.11.400e-12766.93mitochondrial carrier [Nannochloropsis gaditana][more]
GAX15094.11.400e-6040.38hypothetical protein FisN_12Lh209 [Fistulifera sol... [more]
OEU18960.15.500e-6038.08mitochondrial carrier [Fragilariopsis cylindrus CC... [more]
GAY00457.12.700e-5940.11Hypothetical protein PINS_008302 [Pythium insidios... [more]
GAX23636.11.000e-5839.34hypothetical protein FisN_12Hh209 [Fistulifera sol... [more]
XP_008912474.11.100e-5740.06hypothetical protein PPTG_16747 [Phytophthora para... [more]
XP_002181224.13.300e-5738.98predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBJ26620.12.400e-5537.98conserved unknown protein [Ectocarpus siliculosus][more]
XP_008880806.12.400e-5538.18hypothetical protein H310_14681 [Aphanomyces invad... [more]
OQR92131.13.100e-5537.53inorganic diphosphatase [Achlya hypogyna][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR029ncniR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000124NSK000124Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03550.1NO06G03550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597703gene_6681Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100268g9gene4179Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03550.1NO06G03550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03550 ID=NO06G03550|Name=NO06G03550|organism=Nannochloropsis oceanica|type=gene|length=1287bp
ATGGAGGGAGGGGAGGAGGTTGCTGCCGCGGGCTCGTCAAACCAGgtatg
taaggccatcagtcctcactatgacttttattgccttgtcctgcccgacc
gacttcctagattgattggatgtcggaccttctgaagcccctttttcccc
ttcccctttccaacgtctcactcaatctcttcccccaccctttttgagTT
CCTCGAGTCCATGCTCGCCAGTGCCACCGCCGGGGTCATCTCCCGGATCC
TCTGCCACCCCCTCGACACATGCAAAGCCCGTCTTCAAAATCCGGGGAGT
GAATTCTCGGGCACGTTGCAAGTGGTCCGACAGACGCTGCGGCATGAGGG
TATTGGTGGGTTGTATCGTGGGCTCGGCACCGTCATAAGCATTGGCACCC
CGGCCTTCGTCCTCTACCTCACCACGTACGAACAAGCCAAAAAGGCTTTC
CTGGGCATGCCAGCCCTACAAGACAACTATGAATTTGTTGGGCATTTTGG
CGCGGGAATGGCCGCAGAGACAGTCTCCTGCTTGATATACGTTCCCGTGG
ACGTGGTGAAAGAACGCTTGCAAGTTCAACGTCGATTGCGGAGCGGACAA
GAAATTTCTGGGACCCTACCTATGTACCGTGGGACGTGGCATGCACTATC
AACCATCATGCAAACGGAAGGATTGAGGGGGGTATACAGAGGATACGGGG
CAACACTGCTGTCCTTTGGTCCGTTCTCTGCTTTTTACTTTTTGTTCTAC
GAGAAATTCAAGCAGTGGAGCGCGACCTCCGTGGGACTGGCCACACAAGA
AGACTTGCCCTTCCACTTAACCTTAGCGTCAGCCGCTGGCGCTGGGTCTC
TGGCCTCTTTTATCACCAATCCTGTAGACTTGGTTCGACTCCGTCTGCAG
GTGCAACGAGGGTCTTCCTCCTCCTCGCCCTCCTCCTCCTCTTCCTCCCC
CTCCTCCACCCCCTCAGCGTCACCGCCGACGGTGCCAGCAACATCGAAAC
TTGCCAACAATAGCTCCATTCATGGACATCACTCTCATCCAATGCCATCA
ATACTGCCACCACTTGGAGGAGGAGGAGGAAAAATAACGGCAGCAGCAGC
GAAGGTGGTAGTGGAGCAATACCACAACACTCTTGATGGATTGACCAAAG
TATACCGACGGGAGGGATTTCACGGCTTGTTTAAGGGCTCAGGGGCACGG
ATTGCTTTTTATACTCCCTCGACGATGATTTCGATGAGTGTGTACGATAC
CTTGAAGAGAGAATTCCATCACTTGCTTTCGAAGTGA
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protein sequence of NO06G03550.1

>NO06G03550.1-protein ID=NO06G03550.1-protein|Name=NO06G03550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=378bp
MEGGEEVAAAGSSNQFLESMLASATAGVISRILCHPLDTCKARLQNPGSE
FSGTLQVVRQTLRHEGIGGLYRGLGTVISIGTPAFVLYLTTYEQAKKAFL
GMPALQDNYEFVGHFGAGMAAETVSCLIYVPVDVVKERLQVQRRLRSGQE
ISGTLPMYRGTWHALSTIMQTEGLRGVYRGYGATLLSFGPFSAFYFLFYE
KFKQWSATSVGLATQEDLPFHLTLASAAGAGSLASFITNPVDLVRLRLQV
QRGSSSSSPSSSSSSPSSTPSASPPTVPATSKLANNSSIHGHHSHPMPSI
LPPLGGGGGKITAAAAKVVVEQYHNTLDGLTKVYRREGFHGLFKGSGARI
AFYTPSTMISMSVYDTLKREFHHLLSK*
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Synonyms
Publications