NO06G03420, NO06G03420 (gene) Nannochloropsis oceanica

Overview
NameNO06G03420
Unique NameNO06G03420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4094
Alignment locationchr6:945073..949166 -

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Properties
Property NameValue
DescriptionShikimate transporter 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:945073..949166 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR020846MFS_dom
IPR011701MFS
Homology
BLAST of NO06G03420 vs. NCBI_GenBank
Match: EWM26336.1 (shikimate transporter 3 [Nannochloropsis gaditana])

HSP 1 Score: 661.8 bits (1706), Expect = 2.500e-186
Identity = 339/515 (65.83%), Postives = 404/515 (78.45%), Query Frame = 0
Query:  110 STAAHAIANAFFSSTLTWLLWSLYCVLAGSLFVDIFYPREWRASEHRLLRILNYFTRPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACIGLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKGLVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRWRLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTANILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEALFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMYVANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAWPYVSQALLAAGKGSKFSFLALENGVNPVGLVLFVSLVXXXXXXSVLMIQIYSSGGRGGVPLPFNVLSRRSKVREHVGGGIQQQL-QREQMEKGLGVAGEEG-----QEEENAQQG-GVGMREQE 618
            +TAA AIANAF +STLTWLLWSLY VLAGSLFVDIFYP+ W  SEHRLLR L+Y +RP+G + FGHLGDTWGRTKTLTVCL VMGLAS C+ LLPT   WGW SWYLLL LHALQGLAVGG+WGGCLLL YEFCRHDR+KGLVS+LPQAGRALG+ML++ I+ASL  + P  + + +GG  L L + DLRWR AH  A GL           PE  EF  L+KH+RLR++PL  AL+ Q  NI+W LGALW+DGV QVMVVGWGLP LL   GIS++ LL SL+IA FV+A+F VVGGWLGDR+GRRKLFFVASMS+A+GTVFYF+ALF+LSSP+R  P+Y+ANILYLG+AYG LQG FPALLVE+FP NVR+SGV+++Y +SR+YSS AWPY SQALL A +G++F FLALENG N  GL +FV+ V      SVLMIQIYSSGGRG   LPF ++SRRSKVRE+VGGGIQ QL Q+E++  G    GE G     +E E++++G GVG+   E
Sbjct:   32 ATAAQAIANAFVASTLTWLLWSLYGVLAGSLFVDIFYPQAWHVSEHRLLRTLSYLSRPLGAVLFGHLGDTWGRTKTLTVCLAVMGLASGCMALLPTHQVWGWASWYLLLVLHALQGLAVGGQWGGCLLLAYEFCRHDRHKGLVSSLPQAGRALGYMLTALISASLDKEKPPTAGSPSGGTTLHLADNDLRWRWAHGFAAGLXXXXXXXXXXXPEPREFLYLKKHRRLRAFPLFRALRAQLWNIIWALGALWVDGVTQVMVVGWGLPALLTAHGISMETLLTSLAIAVFVQAVFIVVGGWLGDRLGRRKLFFVASMSMALGTVFYFYALFRLSSPSRAYPIYLANILYLGIAYGTLQGVFPALLVEIFPENVRFSGVAVLYQVSRLYSSVAWPYASQALLRASRGARFKFLALENGENLTGLAIFVASVAGVSAMSVLMIQIYSSGGRGEGVLPFPLVSRRSKVREYVGGGIQHQLQQKEEIMNGSREEGEGGGVRPFEEVEDSEEGEGVGLETYE 546          
BLAST of NO06G03420 vs. NCBI_GenBank
Match: WP_077328927.1 (MFS transporter [Virgibacillus siamensis])

HSP 1 Score: 204.9 bits (520), Expect = 8.200e-49
Identity = 133/412 (32.28%), Postives = 217/412 (52.67%), Query Frame = 0
Query:  116 IANAFFSSTLTWLLWSLYCVLAGSLFVDIFYPREWRASEHRLLRILNYFT-------RPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACIGLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKGLVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRWRLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTANILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEALFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMYVANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAWPYVSQALLAAGKGSKFSFLA 521
            +A++   +T+ W  + LY VLAG +   +++P    + +  +  IL + T       RP+GGI  GH GD  GR   L + L VMG+A+  I  LPT +  G  +  +LL L  LQGLAVGGEWGG +L+ +EF  H   +G  ++LPQ G ++G +LSS I   +     +      G            WR+A  +++ L+ L L++RL++ E+PEF+ ++K     S P  +  K    N+L  +GA ++DGV   ++  + +  L+    IS D  L  +SIA+FV   F  + G++ DRVGR + ++  S+      +  F  +      T ++  +++ I+  G+ Y  + G   AL  E+F   VRY+G+S VY  S ++SSG  P ++  L+A   GS +  +A
Sbjct:    6 VASSMIGATIEWYDFFLYGVLAGIVLNHLYFP----SGDPVISTILAFATFAIGFVMRPLGGIIIGHFGDKIGRKSMLILTLTVMGIATGLIAFLPTYEQIGIWAPIILLVLRMLQGLAVGGEWGGAVLMTFEFA-HPSKRGFFASLPQIGLSIGLLLSSGIVGLISTILTNSQFMVWG------------WRIAFGVSVVLVFLGLYIRLKVSETPEFQKVKKQNTESSVPFKDMWKGNVGNVLAGMGARYIDGVFFNVMGVFSITFLVNNIDISRDVALLGVSIASFVMCFFIPIFGYISDRVGRTRTYWYGSLITGFSALPAFWIMTVSGGNTLLI--WLSIIIPFGIFYAAVYGPEAALFAELFEPRVRYTGMSFVYQFSGIFSSGITPMIATYLIALNGGSPYLLVA 398          
BLAST of NO06G03420 vs. NCBI_GenBank
Match: WP_051405021.1 (MFS transporter [Bacillus cihuensis])

HSP 1 Score: 203.8 bits (517), Expect = 1.800e-48
Identity = 131/405 (32.35%), Postives = 215/405 (53.09%), Query Frame = 0
Query:  113 AHAIANAFFSSTLTWLLWSLYCVLAGSLFVDIFYPREWRASEHRLLRI---LNYFTRPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACIGLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKGLVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRWRLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTANILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEALFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMYVANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAWPYVSQALLAAGKGS 515
            + A+  +   ST+ W  + LY V+AG +F  +++P E       L  I   + +  RPIGGI FGH GD  GR   L + L +MG ++  I ++PT +  G  +   LL L  LQG+ +GGEWGG +L+ +E   H + +GL +++PQ G ++G +LSS I   L   T S S     G           WR+A  L+  L+ L L +RL + ESPEF+ +++  +  + P+ +  K  T N+L  +GA ++DGV   ++  + +  L +   +S    L  +S AAFV   F  + G + DRVGR + + + S+      +  F  +   +S   ++ ++++ I+  G+ Y  + G   AL  E+F + VRY+G+S VY  S +++SG  P ++ ALL    GS
Sbjct:   11 SRAVGASLIGSTIEWYDFFLYGVVAGIVFNKLYFPAEDPIVSTLLAYITFAVGFVARPIGGIIFGHFGDKIGRKSMLIMTLSIMGGSTVLIAVIPTYNQIGIWAPICLLFLRILQGIGLGGEWGGAVLMTFEHAPH-KKRGLYASIPQIGLSMGLLLSSGI-VGLLSSTLSDSQFMTWG-----------WRIAFGLSAILIFLGLWIRLNVSESPEFQNIKERNKESNMPIKDMWKNNTGNVLAGMGARFIDGVFFNVMGVFSITYLTSSLDLSRTDALLGVSAAAFVMCFFIPLFGHVSDRVGRTRTYLIGSLVTGFSALPAFWIM--SNSEGNILLIWLSIIIPFGIFYASIYGPEAALFAELFDAPVRYTGMSFVYQFSGIFASGLTPIIATALLGYNNGS 400          
BLAST of NO06G03420 vs. NCBI_GenBank
Match: WP_049683769.1 (MFS transporter [Bacillus loiseleuriae] >KMY52377.1 major facilitator transporter [Bacillus loiseleuriae])

HSP 1 Score: 201.8 bits (512), Expect = 6.900e-48
Identity = 130/405 (32.10%), Postives = 214/405 (52.84%), Query Frame = 0
Query:  113 AHAIANAFFSSTLTWLLWSLYCVLAGSLFVDIFYPREWRASEHRLLRI---LNYFTRPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACIGLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKGLVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRWRLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTANILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEALFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMYVANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAWPYVSQALLAAGKGS 515
            + A+  +   ST+ W  + LY V+AG +F  +++P E       L  I   + +  RPIGGI FGH GD  GR   L + L +MG ++  I ++PT +  G  +   LL L  LQG+ +GGEWGG +L+ +E   H + +GL ++ PQ G ++G +LSS +   L   T S S     G           WR+A  L+  L+ L L +RL + ESPEF+ +++  +  + P+ +  K  T N+L  +GA ++DGV   ++  + +  L +   +S    L  +S AAFV   F  + G + DRVGR + + + S+      +  F  +   +S   ++ ++++ I+  G+ Y  + G   AL  E+F + VRY+G+S VY  S +++SG  P ++ ALL    GS
Sbjct:   11 SRAVGASLIGSTIEWYDFFLYGVVAGIVFNKLYFPAEDPIVSTLLAYITFAVGFVARPIGGIIFGHFGDKIGRKSMLILTLSIMGGSTVLIAVIPTYNQIGIWAPICLLFLRILQGIGLGGEWGGAVLMTFEHAPH-KKRGLYASFPQIGLSIGLLLSSGV-VGLLSSTLSDSQFMAWG-----------WRIAFGLSAILIFLGLWIRLNVSESPEFQKIKERNKESNMPIKDMWKNNTGNVLAGMGARFIDGVFFNVMGVFSITYLTSSLDLSRTDALLGVSAAAFVMCFFIPLFGHVSDRVGRTRTYLIGSLVTGFSALPAFWIM--SNSGGNILLIWLSIIIPFGIFYASIYGPEAALFAELFDAPVRYTGMSFVYQFSGIFASGLTPIIATALLGYNNGS 400          
BLAST of NO06G03420 vs. NCBI_GenBank
Match: WP_010531797.1 (MFS transporter [Lentibacillus jeotgali])

HSP 1 Score: 201.1 bits (510), Expect = 1.200e-47
Identity = 131/412 (31.80%), Postives = 219/412 (53.16%), Query Frame = 0
Query:  116 IANAFFSSTLTWLLWSLYCVLAGSLFVDIFYPREWRASEHRLLRILNYFT-------RPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACIGLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKGLVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRWRLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTANILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEALFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMYVANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAWPYVSQALLAAGKGSKFSFLA 521
            +A++   +T+ W  + LY V+AG +   +++P    + +  +  +L + T       RP+GGI  GH GD  GR   L + L VMG+A+  I  LPT +  G  +  +LL+L  LQGLAVGGEWGG +L+ +E+ +  R +GL ++LPQ G ++G +LSS I   L       S     G  +        WR+A  +++ L+ L L++RL++ E+PEF+ ++  +     P  +  K    N+L  +GA ++DGV   ++  + +  L+    +S D  L  +SIA+FV   F  + G + DRVGR + ++  S+      +  F  +      T V+  ++A I+  G+ Y  + G   AL  E+F   VRY+G+S VY  S ++SSG  P ++  L+A   G+ +  +A
Sbjct:   13 VASSVIGATIEWYDFFLYGVVAGIVLNQLYFP----SGDPVISTLLAFATFAVGFVMRPLGGIIIGHFGDKIGRKSMLILTLTVMGIATGLIAFLPTYEQIGIWAPIILLALRMLQGLAVGGEWGGAVLMTFEYAKPSR-RGLFASLPQVGLSIGLLLSSGIVGLL-------STLLTNGQFMA-----WGWRVAFGVSVVLVFLGLYIRLKVSETPEFQEVKDQKTESKVPFKDMWKGNVGNVLAGMGARYIDGVFFNVMGVFSITYLVNNIDVSRDVALLGVSIASFVMCFFIPIFGHISDRVGRTRTYWYGSLITGFSALPAFWMMSVSGGSTWVI--WLAIIIPFGIFYASVYGPEAALFAELFEPRVRYTGMSFVYQFSGIFSSGITPMIATYLIALNDGAPYILVA 405          
BLAST of NO06G03420 vs. NCBI_GenBank
Match: WP_017233709.1 (MFS transporter [Pandoraea sp. B-6])

HSP 1 Score: 200.3 bits (508), Expect = 2.000e-47
Identity = 133/396 (33.59%), Postives = 211/396 (53.28%), Query Frame = 0
Query:  119 AFFSSTLTWLLWSLYCVLAGSLFVDIFYPREWRASEHRL---LRILNYFTRPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACIGLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKGLVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRWRLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTANILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEALFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMYVANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAWPYVSQALLAAG 512
            +   +T+ W  + LY  + G +F  +F+P         L   +  + + TRPIGGI FGH GD  GR   L V L +MG+++  IGL+PT D+ G  +  +LL L  LQG+ +GGEWGG +L+ +E+  HDR +G  +A PQ G A+G  LS+ + A L   T + +     G           WRLA  L++ L+ + + +RLR+ E+PEF  ++  QR+   PL E  +    N+L   GA ++DGVV  +   + +  L+         +L ++++AA V  +       L DRVGRR++F   +++  V  +    AL  +   T V  + +A I+ LGV Y  + G   ++  E+F + VRY+G+S+VY +S + SS   P V+  LL  G
Sbjct:   27 SLIGTTVEWYDFFLYGTVTGLVFNKLFFPSGDAFIATALAYTVYAVGFATRPIGGILFGHFGDRLGRKPLLIVTLSIMGVSTFLIGLVPTYDSIGMAAPLILLFLRLLQGIGLGGEWGGAVLMAFEYAPHDR-RGRFAAYPQIGLAVGLCLSTGVVA-LLSSTLTDAQFMAWG-----------WRLAFMLSVVLVAVGMFIRLRVLETPEFARIKDSQRVAHVPLSEIARDYRRNVLLGWGARYIDGVVFNVYAVFAISYLVGTLHFPKTPILLAVTLAAMVLIVTIPYAAKLSDRVGRRRVFGWGALACGVSAI---PALAVMHYATSVWWVSLAVIVPLGVVYAFVYGPEASMFCELFDTRVRYTGISVVYQVSGIVSSSITPLVAATLLEYG 406          
BLAST of NO06G03420 vs. NCBI_GenBank
Match: WP_069399740.1 (MFS transporter [Mycobacterium sherrisii] >ODR07972.1 MFS transporter [Mycobacterium sherrisii] >ORW77873.1 MFS transporter [Mycobacterium sherrisii])

HSP 1 Score: 200.3 bits (508), Expect = 2.000e-47
Identity = 140/412 (33.98%), Postives = 210/412 (50.97%), Query Frame = 0
Query:  116 IANAFFSSTLTWLLWSLYCVLAGSLFVDIFYPREWRASEHRLLRIL--------NYFTRPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACIGLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKGLVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRWRLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALK--TQTANILWVLGALWLDGVV----QVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEALFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMYVANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAWPYVSQALLAAGKG 514
            +A++   +T+ W  + LY + AG +F  +F+P     S   L+  L         +  RP+GG+ FGH+GD  GR KTL   + +MGLA+  IGL+P+  T G  +  LL+ L   QG A+GGEWGG +L+  E+   D+ +G   +LPQ G ALG ML + + A+L     S      G            WR+A  L++ L+ +   +RL++ E+P FR L+K +   S P  E +       N+L  +G+ W +GV      + V+ +G  TL    GI    +L S+  AA     F    G L DR   RKLF +  +     T   FH L    +   VV +    I+ LG  Y M+ G  P+L  ++FP+ VRYSGVS+VY +S +++SG  P +   LL+A  G
Sbjct:   18 VASSILGTTVEWYDFFLYGIAAGLVFRRLFFP-----STDPLVGTLLAFATFAIGFVARPVGGLLFGHIGDRVGRKKTLIATMLIMGLATFLIGLIPSYATIGISAPILLVLLRLAQGAAIGGEWGGAVLMAVEYAPRDK-RGYYGSLPQLGLALGLMLGTGVFAALNSVMSSEQFLAFG------------WRIAFMLSLALVAVGTFVRLKVMETPAFRALEKLEARASLPALEMVSDARMRRNLLLGMGSRWAEGVAFNTWAMFVITYGANTL----GIGRQTMLMSVMAAAAAMVFFIPKYGKLADRYDNRKLFALGVVLSTAATYPAFHLLGNRPAGAAVVTI----IIMLGFLYPMMYGPQPSLYADLFPTRVRYSGVSVVYQLSGIFASGLTPLLLTYLLSAANG 403          
BLAST of NO06G03420 vs. NCBI_GenBank
Match: WP_056520967.1 (MFS transporter [Bacillus sp. Leaf13] >KQU24997.1 MFS transporter [Bacillus sp. Leaf13])

HSP 1 Score: 199.5 bits (506), Expect = 3.400e-47
Identity = 132/410 (32.20%), Postives = 213/410 (51.95%), Query Frame = 0
Query:  110 STAAHAIANAFFSSTLTWLLWSLYCVLAGSLFVDIFYPREWRASEHRLLR---ILNYFTRPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACIGLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKGLVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRWRLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTANILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEALFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMYVANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAWPYVSQALLAAGKGSKF 517
            +T +  +  +   ST+ W  + LY V+AG +F  +++P E       L      + +  RPIGGI FGH GD  GR   L   L +MG ++  I L+PT +  G  +   LL L  LQG+ +GGEWGG +L+ +E     + +GL ++LPQ G ++G +LSS +   L   T S S     G           WR A  L+  L+ L L +RL + ESPEF+ +++     + P+ +  K  T N+L  +GA ++DGV   ++  + +  L +   +S    L  +S AAFV   F  + G + DRVGR + + + S+      +  F  +   +S   ++ ++++ I+ LG+ Y  + G   AL  E+F + VRY+G+S VY  S +++SG  P ++ ALL    GS F
Sbjct:    7 NTLSRVVGASLIGSTIEWYDFFLYGVVAGIVFNKLYFPVEDPIVSTLLAYATFAVGFVARPIGGIIFGHFGDKIGRKSMLITSLGIMGGSTVLIALIPTYNQIGIWAPICLLLLRILQGIGLGGEWGGAVLMTFEHAPL-KKRGLYASLPQIGLSIGLLLSSGV-VGLLSSTLSDSQFMTWG-----------WRTAFGLSSILIFLGLWIRLNVSESPEFKKVKERNNESNMPIKDMWKNNTGNVLAGMGARYIDGVFFNVMGVFSITYLTSSLDLSRTEALLGVSAAAFVMCFFIPLFGHISDRVGRTRTYLIGSLVTGFSALPAFWIM--SNSNGNILLIWLSLIIPLGILYSSVYGPEAALFAELFDAPVRYTGMSFVYQFSGIFASGLTPIIATALLGYNNGSPF 401          
BLAST of NO06G03420 vs. NCBI_GenBank
Match: WP_009521940.1 (MFS transporter [Ralstonia sp. PBA] >EIZ04227.1 major facilitator superfamily protein [Ralstonia sp. PBA])

HSP 1 Score: 199.5 bits (506), Expect = 3.400e-47
Identity = 126/405 (31.11%), Postives = 211/405 (52.10%), Query Frame = 0
Query:  116 IANAFFSSTLTWLLWSLYCVLAGSLFVDIFYPREWRASEHRLLRILNY-------FTRPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACIGLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKGLVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRWRLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTANILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEALFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMYVANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAWPYVSQALLAAGKG 514
            ++++   +T+ W  + LY V+AG +F  +++P    A +  +  +L Y        TRP+GG+ FGH GD  GR   L + L +MG+A+  IGL+PT +  G  +  LLL L   QG+ +GGEWGG +L+ YE+   +R +G  ++LPQ G A+G  L+S +   L            G            WR+A  L+ G++ +  ++RL + E+PEF  +++       P  + +K    N+L  +GA ++DGV   +   + +  L     IS    L  +  AA V   F    G L D+VGR +++F  S+  A      F  +  +++P  V  ++++ ++  G+ Y  + G   AL  E+F ++VRY+G+S VY  S +++SG  P ++ ALL AG G
Sbjct:   17 VSSSVIGATIEWYDFFLYGVVAGIVFNKLYFP----AGDPLISTLLAYATFAVGFVTRPLGGVIFGHFGDKIGRKSMLVMTLMIMGIATFLIGLVPTYEQIGIAAPILLLVLRIFQGIGLGGEWGGAVLMAYEYAPKER-RGFYASLPQVGLAIGLCLASGVVGLLSYSLTDEQFLSWG------------WRVAFILSAGMVFVGTYIRLHVKETPEFTKVKETNAETKIPFMDMIKRYPGNVLKGMGARYIDGVFFNIFGVFSITYLTQTIKISRTDALIGVMAAAIVMIFFIPFFGHLSDKVGRTRVYFWGSLITAFSAFPAFWLM--MNNPENVTVLWLSIVIPFGILYASVYGPEAALFCELFDASVRYTGISFVYQFSGIFASGITPMIATALLKAGNG 402          
BLAST of NO06G03420 vs. NCBI_GenBank
Match: WP_105510299.1 (MFS transporter [Paraburkholderia sp. BL21I4N1] >PQV46704.1 MHS family metabolite:H+ symporter-like MFS transporter [Paraburkholderia sp. BL21I4N1])

HSP 1 Score: 199.5 bits (506), Expect = 3.400e-47
Identity = 130/405 (32.10%), Postives = 218/405 (53.83%), Query Frame = 0
Query:  123 STLTWLLWSLYCVLAGSLFVDIFYPREWRASEHRLLRILNY-------FTRPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACIGLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKGLVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRWRLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTANILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEALFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMYVANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAWPYVSQALLAAGKGSKFSFLA 521
            +T+ W  + LY V+AG +F  +++P    AS+  +  +L Y        TRP+GG+ FGH GD  GR   L + L +MG+++A +  +PT    G  +  LLLSL  LQG+ +GGEWGG +L+ YE+   ++ +GL ++LPQ G ++G  L+S + ASL    P  +    G            WR+A A ++GL+L+ L++R ++ E+PEF  L++  R    P  + +    + ++  +GA ++DGV   +   + +  L     +S    L  + IAA V   F  + G L DR+GR K++F  S+   V +VF    L ++  P   + ++ A ++  G+ Y M+ G   AL  E+F + VRY+G+S VY  S +++SG  P ++  L+    G  ++  A
Sbjct:   19 ATVEWYDFFLYGVVAGIVFNKLYFP----ASDPLVSTLLAYSTFAVGFVTRPLGGVLFGHFGDRIGRKSALILTLIIMGISTAGVAFVPTYAQIGIWAPILLLSLRVLQGIGLGGEWGGAVLMAYEYAPPEK-RGLYASLPQIGLSIGLCLASGMVASLSRLLPETAFLAWG------------WRIAFAASLGLVLIGLYIRSKVMETPEFIALKRGGREAKIPFVDMITRYRSEVMLGMGARYIDGVFFNIFAVFSIGYLTQRVSMSRTDALLGVMIAAAVMCFFIPLFGSLSDRIGRAKVYFWGSLICGV-SVFPSFWLIEM-QPGNTLLIWTAIVIPFGIFYAMVYGPEAALFAELFDAKVRYTGISFVYQFSGIFASGLTPIIATILMRLNGGKPWTVCA 404          
The following BLAST results are available for this feature:
BLAST of NO06G03420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26336.12.500e-18665.83shikimate transporter 3 [Nannochloropsis gaditana][more]
WP_077328927.18.200e-4932.28MFS transporter [Virgibacillus siamensis][more]
WP_051405021.11.800e-4832.35MFS transporter [Bacillus cihuensis][more]
WP_049683769.16.900e-4832.10MFS transporter [Bacillus loiseleuriae] >KMY52377.... [more]
WP_010531797.11.200e-4731.80MFS transporter [Lentibacillus jeotgali][more]
WP_017233709.12.000e-4733.59MFS transporter [Pandoraea sp. B-6][more]
WP_069399740.12.000e-4733.98MFS transporter [Mycobacterium sherrisii] >ODR0797... [more]
WP_056520967.13.400e-4732.20MFS transporter [Bacillus sp. Leaf13] >KQU24997.1 ... [more]
WP_009521940.13.400e-4731.11MFS transporter [Ralstonia sp. PBA] >EIZ04227.1 ma... [more]
WP_105510299.13.400e-4732.10MFS transporter [Paraburkholderia sp. BL21I4N1] >P... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR029ncniR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03420.1NO06G03420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672535gene_6669Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03420.1NO06G03420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03420 ID=NO06G03420|Name=NO06G03420|organism=Nannochloropsis oceanica|type=gene|length=4094bp
ATCTTCTCACATGAACCGGTTCAGCACCCTACCTCTCGCACCGACTGCCT
TGTCCTTTTTTAATGCGTATGTGTTTCTGGACTGTGGACTAAACGGAAGG
CTGCCGATTGGTAGGGTGCCCCGAGACATTCCTTTTCCAGGGCAGCAAAA
CCTCTCATTGCCTTTGTTCCCGGATTTCCTTGCACAGGCCTCAAGCACAG
GCATCGCGCCATTGCGCCATCTGAGGATTTTTTCACTACCCCCCATGCAT
GCCAGCACCCGCCTGCCCCCACTAGAGGCGGCACGGCAAAGCAGCGGCCT
TCAAACGCAACAGCAGGAGGCCAAAAAGgtgcgtgtcgtgaatgggaggg
tcgacgtggtgtgttccgtgcacgccgtacctttgcatgtggttccgggg
aaggagcggtgctggtcaagcgggcgctcctccataagtcgatgctgtag
cctgctacctgtcccagccctgcaagccggtaccaagccatcaaggggat
gacgagcatgtatccttcatctcttatcgaagtggccatgatcccggcga
cccccgtgcatgacccacactccactcaaactgcactacttcttttcctg
aagtctcaaattaacttcaatccctcctcttttctcatttctgcagAGGA
AAAAAAGCACCGCCGCCCACGCCATAGCAAACGCCTTCTTCTCCTCCACC
CTAACCTGGCTCCTGTGGTCACTCTACTGCGTGCTAGCAGGCTCCCTTTT
CGTTGATATATTTTATCCACGTGAATGGCGGGCCTCGGAACATCGCCTCC
TACGTATCCTCAACTACTTTACTCGGCCCATCGGCGGCATCTTCTTCGGA
CACCTAGGTGACACATGGGGACGAACCAAAACCCTTACTGTCTGCCTCTG
CGTTATGGGGCTCGCCTCTGCGTGCATTGGTCTTCTCCCCACGGAAGACA
CATGGGGTTGGGGGTCTTGGTACCTGCTTCTCTCGCTGCACGCACTTCAG
GGCTTGGCCGTGGGCGGGGAGTGGGGCGGTTGCTTACTCTTAGTTTACGA
ATTTTGCCGTCACGATCGGAATAAGGGCCTCGTTTCAGCCCTTCCCCAAG
CAGGACGGGCCTTGGGTTTTATGCTCTCCTCCTACATTACGGCCAGCTTA
TATGACGACACTCCCTCCCCTTCCGATGCTGACAATGGCGGTGGTATCCT
GAAACTCCCCGAGAAAGACCTCCGTTGGCGCCTGGCACATGCGCTTGCCA
TCGGCCTCCTCCTCCTCGCCCTCCATCTCCGCCTCCGCATCCCCGAATCA
CCTGAATTCCGCTTATTACAAAAGCATCAACGTCTTCGCTCCTGGCCCCT
GGGTGAAGCGCTTAAAACGCAAACGGCTAACATTCTCTGGGTGTTGGGCG
CCCTTTGGTTGGATGGAGTGGTCCAGGTGATGGTGGTGGGGTGGGGTTTA
CCCACTCTACTCGCAGAACGTGGGATTTCAATAGATGCCTTGCTCTTTTC
CTTGTCGATAGCAGCTTTTGTCGAGGCACTTTTCACGGTGGTGGGCGGGT
GGCTTGGGGATAGAGTTGGGAGGCGAAAATTGTTCTTTGTGGCTTCGATG
AGCATAGCCGTTGGGACTGTGTTTTACTTTCATGCCCTCTTTCAGTTGTC
GAGCCCGACGAGGGTTGTTCCTATGTATGTGGCCAATATATTGTATCTGG
GTGTGGCGTATGGCATGTTGCAAGGTTCATTCCCGGCGCTGCTTGTCGAA
GTGTTTCCTTCGAATGTGAGGTACAGTGGAGTGTCGCTTGTTTATAACAT
CTCCCGAGTTTACTCGTCGGGAGCTTGGCCCTACGTCAGTCAGGCGCTTT
TGGCGGCAGGAAAAGGGTCCAAGTTTAGTTTTCTGGCTTTGGAAAATGGA
GTGAACCCTGTAGGCTTGGTCCTATTCGTGTCGCTTGTTGCTGTAGTGGC
CGCGGTGAGTGTGCTAATGATCCAGATTTATTCAAGCGGAGGGCGGGGTG
GAGTGCCCCTGCCGTTCAATGTCTTGTCGAGAAGGAGTAAGGTGAGGGAG
CACGTGGGAGGGGGGATTCAGCAGCAGCTGCAGAGGGAGCAGATGGAGAA
GGGGCTGGGTGTGGCGGGGGAGGAGGGGCAGGAAGAGGAAAATGCGCAGC
AGGGAGGAGTGGGGATGAGGGAGCAGGAGAGAGGAATGGAGTTTGTGGGA
CAGGGGAGCTGGCGGAGAAGGGGAAGGAGGAGAGAAGAGAGGTCTGATGC
AGGTGGTGGAGGGCTAGACGTCAAGACGGAGGAACAGAAGTACTATCTGG
AGGGCGAGGAGGAGGAGGAGGAGGACTACGACGACGACATTGATGACAGC
TATTACGAAGACGGCGAGGAGGAAGAGGACGATCAGGATGACTCGGCCTC
ATCTGTATTCTCGGATTTCGACGAAGAACGAGAACAAGATCTCCACCCTC
GGCAATAATAGTGGCAGCATTCAGCGGAGCAGCAGCCGCCGGCGCCGTAA
ACGGAGAGATGTATATGTCGGGGACGCGGGACGAAATCCACGGCGATTAA
ACGGTCGGGGATGAAAAGGGACCGAAGGGAGTCGTATGATATTTAGAGTT
GCGCCAAGCAGTGTTTGAGTGGTTTTAAAGAAAGCAAACGTAAAGCAAAC
GTGGGAATGAAAAATAGGGTCACCAAGCCGCCGCCAGAACATGAACAGCA
ACAGCAGCGTCGTACAGGAAAGCGTAAAAAGGCAGATCTCGGACAGGGAG
CCGAGAATAAGGAAAAGCAGAATAACAAGAACAAATTCTGAAACGAGGAA
TAAAACTCAAATATGGGTCATGAAATGTACAGTCAGAATAGCCCTGGTTG
CCGCTGGCACACAAGCAGCACAAACAGCAGTAGCAACAGCAACAGCAGTA
TCGTACAGCGAAGCGTCAAGAGGGAGACCTCGAAGAGAGAGCAAAGAATA
AGAAAGGGCAGATTTGTAATTATTGGTGAAAAGCAGCTAGCGTGTTAGTG
TGTCCATCTGTTTGAGTGAACAAACATTGGGATACTGAACAAAATCCCTT
CCTCCATACTTAGACAACATGCAGGAAAAAGGCGGAAAAGAGAAAGGCGC
CCGCCTGTGAAAGGAGCAACACGAAAGAGTGTCGTAAGTAACCCAATATC
ACGCACAATCCTGGAGCAATTAACAAGGCTACAAGAATGGAAAATAGACT
AATACCGCTAATTTTCACACGTACATGATCAAAGAGGGGCGATGACACAC
ACCTCTATCTCTTTCTCTTTGCACACCTAGGTGTCTCTTCCTTCGCTCCG
CAGATTCCCTCAATCAATCACTCTCACATTTTGTAACATAGCACGCCCAA
CGTCCCAAAGAAAACATATATAATGTGCCGTTGCTGATGCGTCACCTCGA
ATCCGAAGCCCTCCCCGATCGCAACGTGCCAGTGACTTCCAAATTTCTTG
TCAAACGTATTCTGTTTTTATAAAGTAGGATTGAGCAGAAACGAAGGGGG
CGGCGTGAGAAGTGCAAGATTGTGCGTAAAGACTGGAAGGAGGAAACAGA
TGGTTATGCTACCCAGGACATTTCATAAATAGACACCTCAAAAAGCTCAC
TTTCATCATCGTGGCGGCGGCCTCATAGTTTTTGGAAGTAGCGTGCTTGT
CGACCGCCATGGTGATAAGCTCCACAGCTTCGGTATACATTTCGGGTCCC
ATGTCATGGTGCTTTTGATTTCATGTAAATGAGAGATCGAAACGAAAAGG
TTTGTGAGAACTCAATGAAAATGTTGCTTCGATAGAAATGAAAATCAGCT
CAGAAAAATGCAGGCGTTTGGGAGAGACGCGGGGCGTGAGACTAGAAATT
GAAAGCTAAACTGCCTGTTTTCCCCAAAAGGCAGTCTTACAAAAAGGTGT
CCAGTTACATGATTTGTGGGCACAACCAAATATTTCTACCTTGACAAGTG
GTTTGGTGATGAGTTTGCGTAGAGCTTCTTGCTCATTGCTGCTGTACGAG
GGCATAAGCGAAGCCATGGAGGACGCCCCTGTTTGGTTAGTGCCGATGAA
AGAGGAGGTCTGTCGGTAATGGAAGCGGCAAATCTTATGATGAG
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protein sequence of NO06G03420.1

>NO06G03420.1-protein ID=NO06G03420.1-protein|Name=NO06G03420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=710bp
MNRFSTLPLAPTALSFFNAYVFLDCGLNGRLPIGRVPRDIPFPGQQNLSL
PLFPDFLAQASSTGIAPLRHLRIFSLPPMHASTRLPPLEAARQSSGLQTQ
QQEAKKRKKSTAAHAIANAFFSSTLTWLLWSLYCVLAGSLFVDIFYPREW
RASEHRLLRILNYFTRPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACI
GLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKG
LVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRW
RLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTA
NILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEA
LFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMY
VANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAW
PYVSQALLAAGKGSKFSFLALENGVNPVGLVLFVSLVAVVAAVSVLMIQI
YSSGGRGGVPLPFNVLSRRSKVREHVGGGIQQQLQREQMEKGLGVAGEEG
QEEENAQQGGVGMREQERGMEFVGQGSWRRRGRRREERSDAGGGGLDVKT
EEQKYYLEGEEEEEEDYDDDIDDSYYEDGEEEEDDQDDSASSVFSDFDEE
REQDLHPRQ*
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Synonyms
Publications