NO06G03400, NO06G03400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03400 vs. NCBI_GenBank
Match: EWM26323.1 (dna replication complex gins protein psf2 [Nannochloropsis gaditana]) HSP 1 Score: 339.3 bits (869), Expect = 9.500e-90 Identity = 190/236 (80.51%), Postives = 205/236 (86.86%), Query Frame = 0 Query: 8 LAVRAGSSEMEFLAEETMIEIEARFNHPPLKLIRGTFGPFYPNQRAQVPLWLALTLKKQMKCRVVLPDWLDGESLAEVLKEERAQEGTFQDLPFHYVEIATLLLKTAGDEFVMPDRIRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRNFLTQAMNMFYVLSGQEVVXXXXXXXXXXXXXXXXXXXXXXXXXXXVSG-NGPPRKLRRFREDAPSEGTN 243 +A ++ SSEMEFLAEE ++EIEARFNHPPLKLIRGTFGPFYPNQRA+VPLWL L+LKKQ KCR+VLP+WLD E LAEVL++ERAQEG FQDLPF+YVEIATLLL TA DEF MPDR RSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVR FLT+AM +FY LSGQEVV XXXXXXXXXXXXXXX SG NGPPRKLRRFRE+A EGTN Sbjct: 1 MAAQSRSSEMEFLAEEMIVEIEARFNHPPLKLIRGTFGPFYPNQRAKVPLWLGLSLKKQKKCRLVLPEWLDSEHLAEVLRQERAQEGIFQDLPFYYVEIATLLLATAADEFPMPDRTRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRGFLTEAMGLFYTLSGQEVVAQGGGREGGVXXXXXXXXXXXXXXXRTGSGRNGPPRKLRRFREEAAREGTN 236
BLAST of NO06G03400 vs. NCBI_GenBank
Match: CBJ27440.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 171.4 bits (433), Expect = 3.400e-39 Identity = 83/177 (46.89%), Postives = 120/177 (67.80%), Query Frame = 0 Query: 14 SSEMEFLAEETMIEIEARFNHPPLKLIRGTFGPFYPNQRAQVPLWLALTLKKQMKCRVVLPDWLDGESLAEVLKEERAQEGTFQDLPFHYVEIATLLLKTAGDEFVMPDRIRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRNFLTQAMNMFYVLSGQE 191 ++E+EF+AE+ +IEI +F H PL LI+G FGPF P RA+VPLWLA+TLKK+ KC++ P ++ L +VL+ ER F LP HY+EIA+LLL TA D+ PDR+R+L+ED+ENVR K+ G+ + V + + K+N +GAME+ VR+F +A+ YV+SGQ+ Sbjct: 14 AAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQ-----AVKVNDLGAMELLPVRSFFAEALASLYVVSGQK 185
BLAST of NO06G03400 vs. NCBI_GenBank
Match: OWY98286.1 (DNA replication complex GINS protein PSF2 [Phytophthora megakarya]) HSP 1 Score: 158.7 bits (400), Expect = 2.300e-35 Identity = 82/178 (46.07%), Postives = 118/178 (66.29%), Query Frame = 0 Query: 14 SSEMEFLAEETMIEIEARF----NHPPLKLIRGTFGPFYPNQRAQVPLWLALTLKKQMKCRVVLPDWLDGESLAEVLKEERAQEGTFQDLPFHYVEIATLLLKTAGDEFVMPDRIRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRNFLTQAMNMFYVLS 188 +SE EFLAE+ +I I F N+ L LI G FGPF P VPLWLA+ LK+ KCR++ P WL E L L+ E+A E F++LPFHY+EIA+LLLK A ++ + +RSL+ED++NVR +KIR GL ++ V G + ++ +MN++ A+EI++VR F+ ++N FY LS Sbjct: 6 ASETEFLAEQELIAIMPHFHLRDNNAMLNLISGDFGPFQPGITTHVPLWLAIMLKQLNKCRILAPSWLSVEYLTSRLEREKASE-AFEELPFHYLEIASLLLKNAPEDLDQGEHLRSLLEDLQNVRQDKIRNGLAKIAGDVQGGGTALAIQMNNISALEISSVREFMLGSLNQFYQLS 182
BLAST of NO06G03400 vs. NCBI_GenBank
Match: XP_008614879.1 (hypothetical protein SDRG_10656 [Saprolegnia diclina VS20] >EQC31480.1 hypothetical protein SDRG_10656 [Saprolegnia diclina VS20]) HSP 1 Score: 157.1 bits (396), Expect = 6.700e-35 Identity = 85/189 (44.97%), Postives = 120/189 (63.49%), Query Frame = 0 Query: 11 RAGSSEMEFLAEETMIEI----EARFNHPPLKLIRGTFGPFYPNQRAQVPLWLALTLKKQMKCRVVLPDWLDGESLAEVLKEERAQEGTFQDLPFHYVEIATLLLKTAGDEFVMPDRIRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRNFLTQAMNMFY---VLSGQEVV 193 R SSEMEFLAE+ ++ + E + N L I G FGPF+P+ VPLWLA+ LK+ KCR++ P W E L E L+ E E F+ LPFHY+EIATLLLK A D+ +++R ++EDI++ R EKIR GL ++ V G S + ++N+V AMEI +VR F+T+++ FY V+ G EV+ Sbjct: 71 RMRSSEMEFLAEQELVSVMPFFELKENGGLLHGISGDFGPFHPSMATHVPLWLAIKLKQLNKCRILQPSWFTVEHLMERLEGENTSE-AFESLPFHYLEIATLLLKNAPDDMEQAEKMRLILEDIQHTRQEKIRNGLCVLAKDVQTGGSAHAVQLNNVAAMEINSVRQFMTKSLKKFYELNVMGGAEVI 258
BLAST of NO06G03400 vs. NCBI_GenBank
Match: OQR93485.1 (DNA replication complex GINS protein PSF2 [Achlya hypogyna]) HSP 1 Score: 154.8 bits (390), Expect = 3.300e-34 Identity = 82/181 (45.30%), Postives = 119/181 (65.75%), Query Frame = 0 Query: 14 SSEMEFLAEETMIEI----EARFNHPPLKLIRGTFGPFYPNQRAQVPLWLALTLKKQMKCRVVLPDWLDGESLAEVLKEERAQEGTFQDLPFHYVEIATLLLKTAGDEFVMPDRIRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRNFLTQAMNMFYVLSGQE 191 SSEMEFLAE+ +I I E + N L I G FGPF+P+ AQVPLWLA+ LK+ KCR++ P W E L E ++ E + E F+ LPFHY+E+ATLLLK A + +++R ++EDI+++R +KIR GL +++ V G S + ++N+V AMEI +VR F+T ++ FY L+ E Sbjct: 6 SSEMEFLAEQELISIMPFFELKENAGMLHGISGDFGPFHPSMAAQVPLWLAIKLKQLNKCRIIQPSWFTVEHLMERMEGEGSSE-LFESLPFHYLEVATLLLKHAAADMEQAEKMRLILEDIQHLRQDKIRNGLCRIANDVQTGGSAYAVQLNNVAAMEINSVRQFMTGSLKKFYELNALE 185
BLAST of NO06G03400 vs. NCBI_GenBank
Match: GAY03222.1 (Hypothetical protein PINS_011054 [Pythium insidiosum]) HSP 1 Score: 152.5 bits (384), Expect = 1.700e-33 Identity = 77/178 (43.26%), Postives = 118/178 (66.29%), Query Frame = 0 Query: 14 SSEMEFLAEETMIEIEARF----NHPPLKLIRGTFGPFYPNQRAQVPLWLALTLKKQMKCRVVLPDWLDGESLAEVLKEERAQEGTFQDLPFHYVEIATLLLKTAGDEFVMPDRIRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRNFLTQAMNMFYVLS 188 +SE+EFLAE+ +I+I F N L I G FGPF P +VPLWLA+ LK+ KCR++ P W + L++ L+ E+ + F++LPFHY+EIA+LL K A ++ + IRSL+EDI+NVR +KIR GL +++ V G + + +MN++GA+E+ +VR F+ ++N FY L+ Sbjct: 11 ASEIEFLAEQELIDIIPHFGIRENDGVLNFISGDFGPFQPGITTRVPLWLAIMLKQLNKCRIIEPSWFSVDYLSQRLEREKDSD-VFEELPFHYLEIASLLFKHAAEDIEQIEHIRSLLEDIQNVRQDKIRNGLYKIANDVQSGGTAYAIQMNNIGALEVNSVRQFMIGSLNKFYRLA 187
BLAST of NO06G03400 vs. NCBI_GenBank
Match: XP_017240516.1 (PREDICTED: DNA replication complex GINS protein PSF2 [Daucus carota subsp. sativus]) HSP 1 Score: 152.1 bits (383), Expect = 2.200e-33 Identity = 81/179 (45.25%), Postives = 110/179 (61.45%), Query Frame = 0 Query: 14 SSEMEFLAEETMIEIEARFNHPPLKLIRGTFGPFYPNQRAQVPLWLALTLKKQMKCRVVLPDWLDGESLAEVLKEERAQEGTFQDLPFHYVEIATLLLKTAGDEFVMPDRIRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRNFLTQAMNMFYVLSGQEVV 193 ++E+EFLAE+ M+EI PL LI G FGPF P QVPLWLA+ LKK+ KC + LPDW+ E L +VL+ ER FQ LPFHYVEIA LL A D+ +RSL+EDI++VR KI GL+ +S+ + K+ ++ AME+ VR F+ +A+ FY L E++ Sbjct: 14 AAELEFLAEDEMVEIVPNIRMDPLNLISGDFGPFRPQIATQVPLWLAVALKKRGKCTIRLPDWMSVEKLTQVLEAERDSARDFQPLPFHYVEIARLLFDHARDDIPDIYMVRSLIEDIKDVRFHKIGTGLEIISE------RTYAVKLLNLSAMEVNIVRPFVAKALETFYKLDSPEMI 186
BLAST of NO06G03400 vs. NCBI_GenBank
Match: XP_012203277.1 (hypothetical protein SPRG_08643 [Saprolegnia parasitica CBS 223.65] >KDO25990.1 hypothetical protein SPRG_08643 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 151.8 bits (382), Expect = 2.800e-33 Identity = 81/181 (44.75%), Postives = 116/181 (64.09%), Query Frame = 0 Query: 11 RAGSSEMEFLAEETMIEI----EARFNHPPLKLIRGTFGPFYPNQRAQVPLWLALTLKKQMKCRVVLPDWLDGESLAEVLKEERAQEGTFQDLPFHYVEIATLLLKTAGDEFVMPDRIRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRNFLTQAMNMFYVLS 188 R SSEMEFLAE+ +I + E + N L I G +GPF+P+ VPLWLA+ LK+ KCR++ P W E L E L+ E E F+ LPFHY+E+ATLLLK A D+ +++R ++EDI++ R EKIR GL ++ V G S + ++N+V AMEI +VR F+T+++ FY L+ Sbjct: 3 RMRSSEMEFLAEQELISVMPFFELKENGGLLHGIGGDYGPFHPSMATPVPLWLAIKLKQLNKCRILQPSWFTVEHLMERLEGENTSE-AFESLPFHYLEMATLLLKNAPDDMEQAEKMRLILEDIQHTRQEKIRNGLCVLAKDVQTGGSAHAVQLNNVAAMEINSVRQFMTKSLKKFYELN 182
BLAST of NO06G03400 vs. NCBI_GenBank
Match: XP_009522602.1 (hypothetical protein PHYSODRAFT_328060 [Phytophthora sojae] >EGZ19885.1 hypothetical protein PHYSODRAFT_328060 [Phytophthora sojae]) HSP 1 Score: 150.6 bits (379), Expect = 6.300e-33 Identity = 80/179 (44.69%), Postives = 115/179 (64.25%), Query Frame = 0 Query: 14 SSEMEFLAEETMIEIEARF----NHPPLKLIRGTFGPFYPNQRAQVPLWLALTLKKQMKCRVVLPDWLDGESLAEVLKEERAQEGTFQDLPFHYVEIATLLLKTAGDEFVMPDRIRSLVEDIENVRMEKIRRGLQGMS-DTVLRGRSVMSTKMNHVGAMEITTVRNFLTQAMNMFYVLS 188 +SE EFLAE+ +I I F N+ L I G FGPF P VPLWLA+ LK+ KCR++ P WL + L L+ E+A + F++LPFHY+E+A+LLLK A ++ + +RSL+ED++NVR +KIR GL ++ D V G S +MN++ A+EI +VR F+ ++N FY LS Sbjct: 6 ASETEFLAEQELIAILPHFHLRDNNGMLNFISGDFGPFQPGITTHVPLWLAIMLKQLNKCRILAPSWLSVDYLMSRLEREKASD-AFEELPFHYLEVASLLLKNAPEDLDQGEHLRSLLEDLQNVRQDKIRNGLSRIAGDVVQSGGSASVIQMNNISALEINSVREFMIGSLNQFYRLS 183
BLAST of NO06G03400 vs. NCBI_GenBank
Match: XP_024573904.1 (dna replication complex gins protein psf2 [Plasmopara halstedii] >CEG37535.1 dna replication complex gins protein psf2 [Plasmopara halstedii]) HSP 1 Score: 150.6 bits (379), Expect = 6.300e-33 Identity = 77/178 (43.26%), Postives = 116/178 (65.17%), Query Frame = 0 Query: 14 SSEMEFLAEETMIEIEARF----NHPPLKLIRGTFGPFYPNQRAQVPLWLALTLKKQMKCRVVLPDWLDGESLAEVLKEERAQEGTFQDLPFHYVEIATLLLKTAGDEFVMPDRIRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRNFLTQAMNMFYVLS 188 +SE EFLAE+ +I I F ++ L I G FGPF P VPLWLA+ LK+ KCR++ P WL + L+ L+ E+ E F++LPFHY+EIA+LLL+ A ++ + +R L+ED++NVR +KIR GL ++ V G + ++ +MN++ A+EIT+VR F+ ++N FY LS Sbjct: 6 ASETEFLAEQELIMIMPHFHLRDHNGMLNFICGNFGPFQPGMTMHVPLWLAIMLKQVHKCRILAPSWLSVDYLSAQLEREKTSE-VFEELPFHYLEIASLLLQNAPEDLEQSEHLRILLEDLQNVRQDKIRNGLAKIALDVQNGGTALAIQMNNISALEITSVREFMLGSLNQFYQLS 182 The following BLAST results are available for this feature:
BLAST of NO06G03400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03400 ID=NO06G03400|Name=NO06G03400|organism=Nannochloropsis oceanica|type=gene|length=1281bpback to top protein sequence of NO06G03400.1 >NO06G03400.1-protein ID=NO06G03400.1-protein|Name=NO06G03400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=243bpback to top Synonyms
Publications
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