NO06G03340, NO06G03340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03340 vs. NCBI_GenBank
Match: EWM26335.1 (TIP41-like protein [Nannochloropsis gaditana]) HSP 1 Score: 415.2 bits (1066), Expect = 2.400e-112 Identity = 228/443 (51.47%), Postives = 270/443 (60.95%), Query Frame = 0 Query: 1 MPGATVAEPAVLERYQARTTKYDDSTTLALDTWRITSRRRPILSDQEKEALSARIAAYWSAHGKTGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPATMVNPEVLSGSGHNFTPLPEILFGRSYLEIKHAATAGGDEE---GGXXXAGPGQSTSSTIDFCLRFNTTGALISWARRHVDGAGGTPLRVVTVPEASRWAAGNLAVGLKQVRYDWVFGTDYEGELFSNVQGG----EMEGDPCDTCMD--DRESARVGVEWESADASVIDRELLSDRRQPILFYDDITLYEDELHDHGMVLLNAKIRVMPTCWFVLLRYFLRVDRVLIRVEDTRYFHRLGQEWVGKERSRKELTFAQLGKAGLPMETSEYRDVSKVAMMLECAGTPATVVHSRLVLSGAPS 435 MPGATVAE AVL R A K +DST + L W++ SR RPILSDQE+EAL+ RIA +WS H AS A+ +P LS +GHNF PLPEILFG+S+LE++H+ G EE G + +T DF LRFNTTGALISWA RHVD + V+ VPEASRWAAG+L GL+QVRYDWVFGTDYEGEL V+GG ++E DPCDT +D +R+ G+EWE ADASVIDR LL R QPILFYDD+TLYEDELHDHG+V LN K+RVMPTCWFVLLRYFLRVD VL+R+ DTRYFHR+G EW+GKE RKE+TFAQL + GL TSEYRDV+ V M++ G PA V ++RLVL GAPS Sbjct: 1 MPGATVAEEAVLRRNGASVEKSEDSTRIDLGGWQVCSRARPILSDQEREALTQRIAHFWSVHCTDAASMMMASHDTSNYSEVGAGCPSTTGQSTRSGIGEEGA-------------------------------------SASGDHPADLSNAGHNFIPLPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMIDSIGPPADVCYTRLVLHGAPS 406
BLAST of NO06G03340 vs. NCBI_GenBank
Match: XP_005852798.1 (protein phosphatase 2c, partial [Nannochloropsis gaditana CCMP526] >EKU23035.1 protein phosphatase 2c, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 389.8 bits (1000), Expect = 1.100e-104 Identity = 214/427 (50.12%), Postives = 256/427 (59.95%), Query Frame = 0 Query: 14 RYQARTTKYDDSTTLALDTWRITSRRRPILSDQEKEALSARIAAYWSAHGKTGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPATMVNPEVLSGSGHNFTPLPEILFGRSYLEIKHAATAGGDEE---GGXXXAGPGQSTSSTIDFCLRFNTTGALISWARRHVDGAGGTPLRVVTVPEASRWAAGNLAVGLKQVRYDWVFGTDYEGELFSNVQGG----EMEGDPCDTCMD--DRESARVGVEWESADASVIDRELLSDRRQPILFYDDITLYEDELHDHGMVLLNAKIRVMPTCWFVLLRYFLRVDRVLIRVEDTRYFHRLGQEWVGKERSRKELTFAQLGKAGLPMETSEYRDVSKVAMMLECAGTPATVVHSRLVLSG 432 R A K +DST + L W++ SR RPILSDQE+EAL+ RIA +WS H AS A+ +P LS +GHNF PLPEILFG+S+LE++H+ G EE G + +T DF LRFNTTGALISWA RHVD + V+ VPEASRWAAG+L GL+QVRYDWVFGTDYEGEL V+GG ++E DPCDT +D +R+ G+EWE ADASVIDR LL R QPILFYDD+TLYEDELHDHG+V LN K+RVMPTCWFVLLRYFLRVD VL+R+ DTRYFHR+G EW+GKE RKE+TFAQL + GL TSEYRDV+ V M++ G PA V ++RLVL G Sbjct: 1 RNGASVEKSEDSTRIDLGGWQVCSRARPILSDQEREALTQRIAHFWSVHFTDAASMMMASHDTRNYSEVGAGCPSTTGQSTRSGIGEEGA-------------------------------------SASGDHPADLSNAGHNFIPLPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMIDSIGPPADVCYTRLVLHG 390
BLAST of NO06G03340 vs. NCBI_GenBank
Match: CBN74528.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 161.8 bits (408), Expect = 4.900e-36 Identity = 94/262 (35.88%), Postives = 135/262 (51.53%), Query Frame = 0 Query: 160 LPEILFGRSYLEIKHAATAGGDEEGGXXXAGPGQSTSSTIDFCLRFNTTGALISWARRHVDGAGGTPLRVVTVPEASRWAAGNLAVGLKQVRYDWVFGTDYEGELFSNVQGGEM--EGDPCDTCMDDRESARVGVEWESADASVIDRELLSDRRQPILFYDDITLYEDELHDHGMVLLNAKIRVMPTCWFVLLRYFLRVDRVLIRVEDTRYFHRLGQEWVGKERSRKELTFAQLGKAGLPMETSEYRDVSKVAMMLECAGTP 420 LPEILFG + LE +H +E G F L+F + AL W +GA V+ V EA +W +++ YDW +GTDY G G E GD + VEW + + I+R++L D+ PIL YDD+ L+ED +HDHG+V L+ K RVMP WFVLLRY+LRVD V+++V DTR FH+ G+ V +ER++ ++F L + GL + S Y + +L+ + P Sbjct: 60 LPEILFGNNALEFRH-------QESG---------------FILQFESRAALKKWVELFAEGA----FEVIKVREAQKWQT-RTGTPIRKQEYDWTWGTDYAGSCRRQDVGVEYSESGDILQPLTRTGKDTETPVEWVACEPGGINRQMLLDQSSPILMYDDVVLFEDFIHDHGVVRLSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGELSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVLDLSSGP 294
BLAST of NO06G03340 vs. NCBI_GenBank
Match: XP_010547972.1 (PREDICTED: TIP41-like protein [Tarenaya hassleriana]) HSP 1 Score: 129.4 bits (324), Expect = 2.700e-26 Identity = 92/258 (35.66%), Postives = 130/258 (50.39%), Query Frame = 0 Query: 160 LPEILFGRSYLEIKHAATAGGDEEGGXXXAGPGQSTSSTIDFCLRFNTTGALISWARRHVDGAGGTPLRVVTVPEASRWAAGNLAVGLKQVRYDWVFGTDYEG-ELFSNVQGGEMEGDPCDTCMDDRESARVGVEWESADASVIDRELLSDRRQPILFYDDITLYEDELHDHGMVLLNAKIRVMPTCWFVLLRYFLRVDRVLIRVEDTR---YFHRLGQEWVGKERSRKELTFAQLGKAGLPMETSEYRDVSKVAMML 414 LPE++FG + L +KH + D + FN ALI W + G P V VP A++W + + YD+ F T Y G E+ S +G E +G D G+ WE+ + ID LS ++PILFYD++ LYEDEL D+G+ LL K+RVMPT WF+LLR++LRVD VL+R+ DTR F + V +E +E TF G PM++S Y D S+++ L Sbjct: 57 LPEMVFGDNALVLKHIRS----------------------DTKIHFNAFDALIGWKQE------GLP--PVEVPAAAQWKFRSKPSQQVILDYDYTFTTPYSGSEVIS--KGEEKQGADADL------DGETGLRWENCEER-IDLAALS-LKEPILFYDEVVLYEDELADNGVSLLTVKVRVMPTSWFLLLRFWLRVDGVLMRLRDTRMHCVFDKGETPTVVRESCWRESTFQSQSAKGYPMDSSVYSDPSRISQRL 274
BLAST of NO06G03340 vs. NCBI_GenBank
Match: AGJ50600.1 (TIP41 [Pericallis cruenta]) HSP 1 Score: 127.1 bits (318), Expect = 1.300e-25 Identity = 83/258 (32.17%), Postives = 124/258 (48.06%), Query Frame = 0 Query: 160 LPEILFGRSYLEIKHAATAGGDEEGGXXXAGPGQSTSSTIDFCLRFNTTGALISWARRHVDGAGGTPLRVVTVPEASRWAAGNLAVGLKQVRYDWVFGTDYEG-ELFSNVQGGEMEGDPCDTCMDDRESARVGVEWESADASVIDRELLSDRRQPILFYDDITLYEDELHDHGMVLLNAKIRVMPTCWFVLLRYFLRVDRVLIRVEDTRY---FHRLGQEWVGKERSRKELTFAQLGKAGLPMETSEYRDVSKVAMML 414 LPE++FG S L +KH ++ + FN AL+ W + L V VP A++W + + YD+ F T Y G E + E EG C ++WE + + L S ++PILFYD++ LYEDEL D+G+ LL K+RVMP+CWF+LLR++LRVD VL+R+ DTR F + + ++ S +E TF L G P + + Y D + ++ L Sbjct: 57 LPEMIFGDSSLALKHMSSGTK----------------------IHFNAYDALVGWKKER--------LPPVEVPAAAQWKFRSKPFEQIILDYDYTFTTPYSGSETVETGREAESEGSGC-------------IKWEECEEHINVAALAS--KEPILFYDEVVLYEDELADNGVSLLTVKVRVMPSCWFLLLRFWLRVDGVLMRLRDTRILCTFSENTKPVILRDISWREATFKALASKGYPSDCASYNDPNVISQRL 269
BLAST of NO06G03340 vs. NCBI_GenBank
Match: XP_002504608.1 (predicted protein, partial [Micromonas commoda] >ACO65866.1 predicted protein, partial [Micromonas commoda]) HSP 1 Score: 125.9 bits (315), Expect = 3.000e-25 Identity = 91/290 (31.38%), Postives = 131/290 (45.17%), Query Frame = 0 Query: 160 LPEILFGRSYLEIKHAATAGGDEEGGXXXAGPGQSTSSTIDFCLRFNTTGALISWARRHVDGAGGTPLRVVTVPEASRWAAGNLA------------VGLKQVRYDWVFGTDYEGELFSNVQGGEMEGDPCDTCMDDRESARVGVEWESADASVIDRELLSDRRQPILFYDDITLYEDELHDHGMVLLNAKIRVMPTCWFVLLRYFLRVDRVLIRVEDTRYFHRLGQEWVG--------KERSRKELTFAQLGKAGLPMETSEYRDVSKVAMMLECAGTPATVVHSRLVL 430 LPE+++G S LE+ H +T L FN AL W + + PL+V A+ W G+ A + YDW F T Y G + +V W D V DR LL + R PILF+D++TLYE EL D+G++ + K+RVMP CW+VL+R+++RVD VLIR+ +TR+FHR+ G +E +R+E TF L G P E +Y D + A +L AG P + + L + Sbjct: 37 LPEMVYGSS-LELTHESTG----------------------VKLHFNAEDALREWLQEDL-----PPLKVAA---AAVWERGHKAXXXXXXXXXXXXXXXETDAYDWTFTTPYRGSVSVDV-----------XXXXXXXXXXXXPPWTDTDQRV-DRGLLME-RDPILFFDELTLYESELDDNGLMSVTVKVRVMPRCWYVLMRHWMRVDGVLIRLRETRFFHRIATGGSGRDAPCVVVRESARREETFEGLRMRGAPSEPGQYPDADEAASVLLAAGGPVEMEYHALTV 282
BLAST of NO06G03340 vs. NCBI_GenBank
Match: XP_001418859.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO97152.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 125.9 bits (315), Expect = 3.000e-25 Identity = 83/234 (35.47%), Postives = 113/234 (48.29%), Query Frame = 0 Query: 203 LRFNTTGALISWARRHVDGAGGTPLRVVTVPEASRWAAGNLAVGLKQVRYDWVFGTDYEGELFSNVQGGEMEGDPCDTCMDDRESARVGVEWESADASVIDRELLSDRRQPILFYDDITLYEDELHDHGMVLLNAKIRVMPTCWFVLLRYFLRVDRVLIRVEDTRYF------HRLGQEWVGKERSRKELTFAQLGKAGLPMETSEYRDVSKVAMMLECAGTPATVVHSRLVLS 431 LRF AL W + L + V A W ++ YDW F T Y G T +S R WE D IDR +L++ R PIL YD++TLYE EL D+G+ L K+RVMP CWFVLLR++LRVD VLIR+ +TR+F R G V +E R+E T+ L G P + +++ D + A +L AG P +V L ++ Sbjct: 58 LRFEAEDALREWVK--------LGLPAIEVAAAKTWRRSHVERFGDAAEYDWTFTTPYGG-----------------TVTTTSDSNRQPPTWELTDRR-IDRAMLTE-RDPILMYDELTLYESELDDNGVAHLGLKVRVMPKCWFVLLRFWLRVDGVLIRLFETRFFCDFTEVDRTGAVVVVRETQRREETWDALHARGAPCDPTQFPDADQAASVLLAAGGPVDIVTHALTIA 264
BLAST of NO06G03340 vs. NCBI_GenBank
Match: XP_023729399.1 (TIP41-like protein [Lactuca sativa] >XP_023729404.1 TIP41-like protein [Lactuca sativa] >XP_023729410.1 TIP41-like protein [Lactuca sativa] >PLY97597.1 hypothetical protein LSAT_5X116421 [Lactuca sativa]) HSP 1 Score: 125.9 bits (315), Expect = 3.000e-25 Identity = 83/259 (32.05%), Postives = 123/259 (47.49%), Query Frame = 0 Query: 158 TPLPEILFGRSYLEIKHAATAGGDEEGGXXXAGPGQSTSSTIDFCLRFNTTGALISWARRHVDGAGGTPLRVVTVPEASRWAAGNLAVGLKQVRYDWVFGTDYEGELFSNVQGGEMEGDPCDTCMDDRESARVGVEWESADASVIDRELLSDRRQPILFYDDITLYEDELHDHGMVLLNAKIRVMPTCWFVLLRYFLRVDRVLIRVEDTRYFHRLGQE---WVGKERSRKELTFAQLGKAGLPMETSEYRDVSKVAMML 414 T LPE++FG S L +KH ++ + FN AL+ W + L V VP A+ W + + YD+ F T Y G V+ G D E + ++WE D I+ L+ +++PILFYD++ LYEDEL D G+ L K+RVMP+CWF+LLR++LRVD L+R+ DTR F Q + +E +E TF L G P +++ Y D + ++ L Sbjct: 55 THLPEMMFGDSCLVLKHMSSGTK----------------------IHFNAFDALLGWKKE--------ALPPVEVPAAAHWKFRSKPFQQVILDYDYTFTTPYSGS--ETVESG-----------SDSEENKGCLKWEDCDEE-INVVALASKKEPILFYDEVILYEDELADSGVSFLTVKVRVMPSCWFLLLRFWLRVDGALMRLRDTRVFCTFNQNSKPLIIREICWRETTFKALASKGYPSDSASYNDPNIISQRL 269
BLAST of NO06G03340 vs. NCBI_GenBank
Match: XP_007200530.1 (TIP41-like protein isoform X2 [Prunus persica] >ONH91813.1 hypothetical protein PRUPE_8G137600 [Prunus persica]) HSP 1 Score: 125.6 bits (314), Expect = 3.900e-25 Identity = 84/262 (32.06%), Postives = 123/262 (46.95%), Query Frame = 0 Query: 160 LPEILFGRSYLEIKHAATAGGDEEGGXXXAGPGQSTSSTIDFCLRFNTTGALISWARRHVDGAGGTPLRVVTVPEASRWAAGNLAVGLKQVRYDWVFGTDYEGEL-----FSNVQGGEMEGDPCDTCMDDRESARVGVEWESADASVIDRELLSDRRQPILFYDDITLYEDELHDHGMVLLNAKIRVMPTCWFVLLRYFLRVDRVLIRVEDTRY---FHRLGQEWVGKERSRKELTFAQLGKAGLPMETSEYRDVSKVAMML 414 +PE++FG S L +KH + F + FN AL+ W + L V VP A++W + + YD+ F T Y G ++GGE+ D C+ + WE + + L S ++PILFYD++ LYEDEL D G+ LL K+RVMP+CWF+LLR++LRVD L+R+ DTR F+ + +E +E TF L G P E + Y D S ++ L Sbjct: 57 MPEMVFGDSCLALKHVKSG----------------------FTIHFNAFDALVGWKKE--------ALPPVEVPAAAQWKFRSKPSQQIILDYDYTFTTPYCGSETVKFDADKLEGGEISKDTCN------------LHWEDCNEKIDVVALAS--KEPILFYDEVVLYEDELADSGVSLLTVKVRVMPSCWFLLLRFWLRVDGALMRLRDTRMHCAFNDNASPTILREICWREATFQALSAKGYPSEDAAYNDPSIISQRL 274
BLAST of NO06G03340 vs. NCBI_GenBank
Match: XP_021827349.1 (TIP41-like protein [Prunus avium]) HSP 1 Score: 125.6 bits (314), Expect = 3.900e-25 Identity = 84/262 (32.06%), Postives = 123/262 (46.95%), Query Frame = 0 Query: 160 LPEILFGRSYLEIKHAATAGGDEEGGXXXAGPGQSTSSTIDFCLRFNTTGALISWARRHVDGAGGTPLRVVTVPEASRWAAGNLAVGLKQVRYDWVFGTDYEGEL-----FSNVQGGEMEGDPCDTCMDDRESARVGVEWESADASVIDRELLSDRRQPILFYDDITLYEDELHDHGMVLLNAKIRVMPTCWFVLLRYFLRVDRVLIRVEDTRY---FHRLGQEWVGKERSRKELTFAQLGKAGLPMETSEYRDVSKVAMML 414 +PE++FG S L +KH + F + FN AL+ W + L V VP A++W + + YD+ F T Y G ++GGE+ D C+ + WE + + L S ++PILFYD++ LYEDEL D G+ LL K+RVMP+CWF+LLR++LRVD L+R+ DTR F+ + +E +E TF L G P E + Y D S ++ L Sbjct: 57 MPEMVFGDSCLALKHFKSG----------------------FTIHFNAFDALVGWKKE--------ALPPVEVPAAAQWKFRSKPSQQIILDYDYTFTTPYCGSETVKFDADKLEGGEISKDTCN------------LHWEDCNEKIDVVALAS--KEPILFYDEVVLYEDELADSGVSLLTVKVRVMPSCWFLLLRFWLRVDGALMRLRDTRMHCAFNDNASPTILRESCWREATFQALSAKGYPSEDAAYNDPSIISQRL 274 The following BLAST results are available for this feature:
BLAST of NO06G03340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03340 ID=NO06G03340|Name=NO06G03340|organism=Nannochloropsis oceanica|type=gene|length=1703bpback to top protein sequence of NO06G03340.1 >NO06G03340.1-protein ID=NO06G03340.1-protein|Name=NO06G03340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=435bpback to top Synonyms
Publications
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