NO06G03290, NO06G03290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03290 vs. NCBI_GenBank
Match: EWM26322.1 (villin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 117.9 bits (294), Expect = 9.300e-23 Identity = 97/314 (30.89%), Postives = 143/314 (45.54%), Query Frame = 0 Query: 1 MLHIKGARMAHATEVPLAHSSLNMGDCFMLDKGLKLYLYHVPEANRAEKTKVLELILRIRDMELSGRADLILVNEWEKDDENKYKDFGTAFGEERKPVTKKGGADIVAEETASEKISLVRVSEMSGELTLR-------------------------WGVCVG---GERDDGRRKRGGDTLGDHLPGEIPSVDINMPVKRVMKGGEMAVHISYFAEWNAPLPMDMGSSWINSSASSGVALPPPSPPRKAIQSTEARPCWIKEQQQQLQQEKEMELKRGITGKARTIKWSKAAEREATVVLGEVMLTQQVEVGMEE 287 +LH++G + ATEVP SSLN G CF+LD GLKL+L++ P AN EK K LEL +RI+D E GRA+++ VNE +K+DE F A G +R P+T G+ A A E + S +G+LT+ CV G+ KR G L + + +PV RVM+G E A IS+FAEW+AP + + + G T+ P Q+ + Q E L + + R + ++ +R T+ + + T +VEV +EE Sbjct: 134 LLHVEGLGVVRATEVPTQRSSLNAGGCFLLDTGLKLFLWNGPGANCFEKAKALELAMRIKDAERGGRAEILAVNELDKEDEGTCASFWDALGGDRAPLTVSSGSH--ASNEAREVVLARITSGPTGDLTVTPISATHKGLKRSMLASEAVFVLDAGASHCVWAWVGKAATETEKREGLALAVSFVEKTHRSAMEVPVVRVMEGSETAAFISHFAEWDAPYALKFDAIARYTGEGGG---------------TDGAP----SQEGEEQDETRTTLAERLRQEERPL--TEEGDRPGTLRIWRIEKTHKVEVPLEE 424 HSP 2 Score: 75.5 bits (184), Expect = 5.300e-10 Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 0 Query: 448 VPSSKVALGDPTKKEALLSDSEFTAAFSGRSKAEFYALPECRQVALKKGAGLF 501 VP+ + A GDPT++EA+LSD EF A F GRSK EFYALP+ +QVALKK AGLF Sbjct: 907 VPTPQEAAGDPTRREAMLSDEEFAATFKGRSKVEFYALPKWKQVALKKQAGLF 959
BLAST of NO06G03290 vs. NCBI_GenBank
Match: XP_005854348.1 (gelsolin [Nannochloropsis gaditana CCMP526] >EKU22014.1 gelsolin [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 112.5 bits (280), Expect = 3.900e-21 Identity = 97/314 (30.89%), Postives = 142/314 (45.22%), Query Frame = 0 Query: 1 MLHIKGARMAHATEVPLAHSSLNMGDCFMLDKGLKLYLYHVPEANRAEKTKVLELILRIRDMELSGRADLILVNEWEKDDENKYKDFGTAFGEERKPVTKKGGADIVAEETASEKISLVRVSEMSGELTLR-------------------------WGVCVG---GERDDGRRKRGGDTLGDHLPGEIPSVDINMPVKRVMKGGEMAVHISYFAEWNAPLPMDMGSSWINSSASSGVALPPPSPPRKAIQSTEARPCWIKEQQQQLQQEKEMELKRGITGKARTIKWSKAAEREATVVLGEVMLTQQVEVGMEE 287 +L ++G + ATEVP SSLN G CF+LD GLKL+L++ P AN EK K LEL +RI+D E G+AD++ VNE +K+DE F A G +R PVT G+ A A E + S +G+LT+ CV G+ KR G L + + +PV RVM+G E A IS+FAEW+AP + + + G +P ++ + E R K +L+QE+ + G + T+ + + T +VEV +EE Sbjct: 134 LLQVEGLGVVRATEVPKQRSSLNAGGCFLLDTGLKLFLWNGPGANCFEKAKALELAMRIKDAERGGQADILAVNELDKEDEGTCASFWDALGGDRAPVTVSWGSH--ASNEAREVVLARITSGPTGDLTVTPISATHKGLKRSMLASEAVFVLDAGASHCVWAWVGKAATETEKREGLALAVSFVEKTHRSAMEVPVVRVMEGSETAAFISHFAEWDAPYALKFDAIARYTGEGGGA---DGAPSQEGEEQDETRNTLAK----RLRQEERPLTEEG--------------DGPGTLRIWRIEKTHKVEVPLEE 424
BLAST of NO06G03290 vs. NCBI_GenBank
Match: XP_001749908.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ85287.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 86.3 bits (212), Expect = 3.000e-13 Identity = 44/128 (34.38%), Postives = 81/128 (63.28%), Query Frame = 0 Query: 1 MLHIKGARMAHATEVPLAHSSLNMGDCFMLDKGLKLYLYHVPEANRAEKTKVLELILRIRDMELSGRADLILVNEWEKDDENKYKDFGTAFGEERKPVTKKGGADIVAEETASEKISLVRVSEMSGEL 129 ++H+KG R +EVP++ S+N GD F+LD +++Y ++ EA+R EKTK ++++ RIRD E G A ++++++ + DD + G + + K K+ G+D E +A ++++L RVS+ SG + Sbjct: 201 LMHVKGRRKIRVSEVPVSAGSVNEGDVFILDAFMEIYQWNGKEASRLEKTKAMQIVQRIRDQERGGNAKIVVLDQGKDDDTAFWAKMGGSKPAKIKS-AKEAGSDDAHERSAVKEMTLYRVSDASGSM 327
BLAST of NO06G03290 vs. NCBI_GenBank
Match: XP_002115268.1 (hypothetical protein TRIADDRAFT_29352 [Trichoplax adhaerens] >EDV22113.1 hypothetical protein TRIADDRAFT_29352 [Trichoplax adhaerens]) HSP 1 Score: 85.1 bits (209), Expect = 6.700e-13 Identity = 47/128 (36.72%), Postives = 75/128 (58.59%), Query Frame = 0 Query: 1 MLHIKGARMAHATEVPLAHSSLNMGDCFMLDKGLKLYLYHVPEANRAEKTKVLELILRIRDMELSGRADLILVNEWEKDDENKYKDFGTAFGEERKPVTKKGGADIVAEETASEKISLVRVSEMSGEL 129 +LHIKG R V + +SLN GDCF+LD G K+Y + +++R E+ K ++ IRD E G+A + ++++ E DD ++ G F E+ + GG D+ EE ++E I L R+S+ SG+L Sbjct: 134 LLHIKGKRQVRVYPVEVNVTSLNDGDCFILDDGEKIYCWCGKDSSRKERMKASDVARGIRDGERGGKARIYIIDDGEDDDSEFFEALG-GFNREQVLSAEAGGDDVSFEEESAEHIRLYRISDASGDL 260
BLAST of NO06G03290 vs. NCBI_GenBank
Match: XP_015765697.1 (PREDICTED: advillin-like [Acropora digitifera]) HSP 1 Score: 85.1 bits (209), Expect = 6.700e-13 Identity = 46/131 (35.11%), Postives = 82/131 (62.60%), Query Frame = 0 Query: 1 MLHIKGARMAHATEVPLAHSSLNMGDCFMLDKGLKLYLYHVPEANRAEKTKVLELILRIRDMELSGRADLILVNEW-EKDDENKYKDFGTAFGEERKPVTKKGGADIVAEETASEKISLVRVSEMSGELTL 131 + H+KG R ++V L +SSLN GD F+LD+G+ ++ ++ + +R E+ K +E+ RIRD E G+A L++++E + DE+K+ + + GE + +GG D+ E+ + + +SL RVS+ SG L + Sbjct: 135 LFHVKGKRNVRVSQVELHYSSLNKGDVFILDEGMTIHCWNGSQCSRTERMKGIEVARRIRDEERGGKAKLVIIDEGKDHRDESKFFEALGSRGEIKD--ASEGGDDVAFEKHSQQSVSLYRVSDESGTLEI 263
BLAST of NO06G03290 vs. NCBI_GenBank
Match: XP_009064502.1 (hypothetical protein LOTGIDRAFT_221805 [Lottia gigantea] >ESO84882.1 hypothetical protein LOTGIDRAFT_221805 [Lottia gigantea]) HSP 1 Score: 84.7 bits (208), Expect = 8.700e-13 Identity = 49/130 (37.69%), Postives = 73/130 (56.15%), Query Frame = 0 Query: 1 MLHIKGARMAHATEVPLAHSSLNMGDCFMLDKGLKLYLYHVPEANRAEKTKVLELILRIRDMELSGRADLILVNEWEKDDENKYKDFGTAFGEERKPVTKKGGADIVAEETASEKISLVRVSEMSGELTL 131 +LHIKG R +V SSLN GD F+LD GL +Y+++ P ++ EK K E+ RI+D E G+A + +++E DE +K G+ GE + GG D E E + L+RVS+ SG+L + Sbjct: 138 LLHIKGRRNVRVRQVKCDVSSLNQGDVFILDAGLTIYIWNGPSSSMMEKIKGAEVAKRIKDEERGGKAQIYIIDEKWDSDEKFFKALGSE-GEISIKNEENGGDDREFERMEQENVKLMRVSDASGQLEI 266
BLAST of NO06G03290 vs. NCBI_GenBank
Match: XP_018578161.1 (gelsolin-like [Anoplophora glabripennis]) HSP 1 Score: 84.0 bits (206), Expect = 1.500e-12 Identity = 63/223 (28.25%), Postives = 102/223 (45.74%), Query Frame = 0 Query: 1 MLHIKGARMAHATEVPLAHSSLNMGDCFMLDKGLKLYLYHVPEANRAEKTKVLELILRIRDMELSGRADLILVNEWEKDDENKYKDFGTAFGEERK---PVTKKGGADIVAEETASEKISLVRVSEMSGELTLR--------------------------WGVCVGGERDDGRRKRGGDTLGDHLPGEIPSVDINMP----VKRVMKGGEMAVHISYFAEWNA 191 + +KG+R +V + +S+N GDCF+LD G K+Y+Y +A R EK K + +IRD + +G+A +I+++E+ E+ Y++F A GE K P GG D E T ++SL RVS+ SG + + V +G + D+ RK + + + N P V+R+++G E YF W A Sbjct: 203 LFQVKGSRNIRVKQVIPSIASMNNGDCFILDMGRKIYVYVGSKARRVEKLKAINAANQIRDQDHAGKAKVIIIDEF--GPESDYEEFFEALGEGSKDEVPEESAGGDDDDFELTEENQVSLYRVSDNSGAIHIEKVAQKPLEASILDSNDCYILDTTDADLYVWIGKQCDEKERKEALRKADEFVTSK------NYPSWTHVQRIIQGAEPTAFTQYFRSWQA 417
BLAST of NO06G03290 vs. NCBI_GenBank
Match: XP_012737971.1 (adseverin [Fundulus heteroclitus]) HSP 1 Score: 83.6 bits (205), Expect = 1.900e-12 Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 0 Query: 1 MLHIKGARMAHATEVPLAHSSLNMGDCFMLDKGLKLYLYHVPEANRAEKTKVLELILRIRDMELSGRADLILVNEWEKDDENKYKDFGTAFGEERKPVTKKGGADIVAEETASEKISLVRVSEMSGELT 130 +L +KG R ATE+ L +S N GDCF++D G ++Y + E+NR E+ K ++ IRD E +GRAD+I++ E + E K+ GT KP G +D E+ K SL VS+ +G LT Sbjct: 185 LLRVKGRRTVRATEMALTWTSFNKGDCFIIDLGKEIYHWSGSESNRYERLKTTQMAQDIRDNERNGRADMIMIEE-GSEPEAVIKELGT------KPELPSGDSDESDEKAKKNKASLYLVSDAAGSLT 306
BLAST of NO06G03290 vs. NCBI_GenBank
Match: XP_004702746.1 (PREDICTED: adseverin [Echinops telfairi]) HSP 1 Score: 82.4 bits (202), Expect = 4.300e-12 Identity = 49/132 (37.12%), Postives = 74/132 (56.06%), Query Frame = 0 Query: 1 MLHIKGARMAHATEVPLAHSSLNMGDCFMLDKGLKLYLYHVPEANRAEKTKVLELILRIRDMELSGRADLILVNEWEKDDENKYKDFGTAFGEERKPVTKKGGA--DIVAEETASEKISLVRVSEMSGELTL 131 +LH+KG R+ ATEVPL+ +S N GDCF++D G ++Y + N+ E+ K ++ + IRD E GR+ LI+V E + E K T GE KP + G D +A+ T L VS+ SG +++ Sbjct: 139 LLHVKGRRVVRATEVPLSWNSFNKGDCFIIDLGTEIYQWCGSSCNKYERLKASQVAIGIRDNERKGRSQLIVVEEGSEPPELK-----TVLGE--KPELRDGDEDDDTIADMTNRRMAKLYMVSDASGSMSV 263
BLAST of NO06G03290 vs. NCBI_GenBank
Match: XP_007554745.1 (PREDICTED: gelsolin-like [Poecilia formosa]) HSP 1 Score: 82.4 bits (202), Expect = 4.300e-12 Identity = 46/129 (35.66%), Postives = 72/129 (55.81%), Query Frame = 0 Query: 1 MLHIKGARMAHATEVPLAHSSLNMGDCFMLDKGLKLYLYHVPEANRAEKTKVLELILRIRDMELSGRADLILVNEWEKDDENKYKDFGTAFGEERKPVTKKGGADIVAEETASEKISLVRVSEMSGELT 130 +LH+KG R ATEV L+ S N GDCF++D G +Y + E+NR E+ K ++ IRD E GRA++ +++E + + E K+ G KP G D+ E+ K SL ++S+ SG ++ Sbjct: 132 LLHVKGRRTVRATEVALSWDSFNKGDCFIIDLGKVIYQWSGSESNRYERLKATQMAKDIRDNERHGRAEVQMIDEGD-EPEAVIKELGP------KPNLPSGNCDVAHEKPKKNKASLYQISDASGNMS 253 The following BLAST results are available for this feature:
BLAST of NO06G03290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03290 ID=NO06G03290|Name=NO06G03290|organism=Nannochloropsis oceanica|type=gene|length=2759bpback to top protein sequence of NO06G03290.1 >NO06G03290.1-protein ID=NO06G03290.1-protein|Name=NO06G03290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=501bpback to top Synonyms
Publications
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