NO06G03270, NO06G03270 (gene) Nannochloropsis oceanica

Overview
NameNO06G03270
Unique NameNO06G03270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4017
Alignment locationchr6:911888..915904 -

Link to JBrowse

Properties
Property NameValue
DescriptionS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:911888..915904 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0032259methylation
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008175tRNA methyltransferase activity
GO:0008168methyltransferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR028590RNA_methyltr_E_Trm7
IPR002877rRNA_MeTrfase_FtsJ_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
[Close]
BLAST of NO06G03270 vs. NCBI_GenBank
Match: EWM26321.1 (cell division protein [Nannochloropsis gaditana])

HSP 1 Score: 383.3 bits (983), Expect = 6.400e-103
Identity = 199/268 (74.25%), Postives = 213/268 (79.48%), Query Frame = 0 
Query:    1 MGKVVRDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQM-----XXXXXXXXXXXXXXXXXXXXXPAYGGSASGRMVGPYVERGDLSGF 264
            MGKVVRDLYYR+AKEVGFRARSAFKLLQLD EF LF+ VQKAVDLCAAPGSWSQVLATRLYP+S    +  GERER++AVDLQEMAPIPGVRQLQGDIT Q TADTIIGHF G+RVDLVVCDGAPDVTGLHDMDEFLQAQL+F AL ITTHVL +GGKFVAKVFRGRDLTLLAAQLRLFFES+TVAKPASSR NSSECFVVCEGF GP+P HGYIP+M                           +    A    V  YVE+GDLSGF
Sbjct:    1 MGKVVRDLYYRKAKEVGFRARSAFKLLQLDEEFGLFRNVQKAVDLCAAPGSWSQVLATRLYPDSAFTDDKGGERERVIAVDLQEMAPIPGVRQLQGDITSQATADTIIGHFEGQRVDLVVCDGAPDVTGLHDMDEFLQAQLIFGALAITTHVLASGGKFVAKVFRGRDLTLLAAQLRLFFESITVAKPASSRINSSECFVVCEGFQGPIPAHGYIPEMVTPTLGQGSRDQAAQTEKDAQRDEEEDSGENRALKIAVRCYVEQGDLSGF 268
[Close]
BLAST of NO06G03270 vs. NCBI_GenBank
Match: XP_005854344.1 (cell division protein [Nannochloropsis gaditana CCMP526] >EKU22010.1 cell division protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 382.5 bits (981), Expect = 1.100e-102
Identity = 198/268 (73.88%), Postives = 212/268 (79.10%), Query Frame = 0 
Query:    1 MGKVVRDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQM-----XXXXXXXXXXXXXXXXXXXXXPAYGGSASGRMVGPYVERGDLSGF 264
            MGKVVRDLYYR+AKEVGFRARSAFKLLQLD EF LF+ VQKAVDLCAAPGSWSQVLATRLYP+     +  GERER++AVDLQEMAPIPGVRQLQGDIT Q TADTIIGHF G+RVDLVVCDGAPDVTGLHDMDEFLQAQL+F AL ITTHVL +GGKFVAKVFRGRDLTLLAAQLRLFFES+TVAKPASSR NSSECFVVCEGF GP+P HGYIP+M                           +    A    V  YVE+GDLSGF
Sbjct:    1 MGKVVRDLYYRKAKEVGFRARSAFKLLQLDEEFGLFRNVQKAVDLCAAPGSWSQVLATRLYPDGAFTDDKGGERERVIAVDLQEMAPIPGVRQLQGDITSQATADTIIGHFEGQRVDLVVCDGAPDVTGLHDMDEFLQAQLIFGALAITTHVLASGGKFVAKVFRGRDLTLLAAQLRLFFESITVAKPASSRVNSSECFVVCEGFQGPIPAHGYIPEMVTPTLGQGSRDQAAQTEKDVQRDEEEDSGKDRALNIAVRCYVEQGDLSGF 268
[Close]
BLAST of NO06G03270 vs. NCBI_GenBank
Match: KFH73845.1 (ribosomal RNA methyltransferase 1 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 285.8 bits (730), Expect = 1.400e-73
Identity = 149/259 (57.53%), Postives = 182/259 (70.27%), Query Frame = 0 
Query:    6 RDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQMXXXXXXXXXXXXXXXXXXXXXPAYGGSASGRMVGPYVERGDLSGFE 265
            RD+YYR AKE G+RARSAFKL+Q+D EF+L +GV KAVDLCAAPGSWSQVL+ +L  N     + EGE  +IVAVDLQ MAP+PGV QLQGDIT Q TAD II +F GER D+VVCDGAPDVTGLHDMDE++QAQL+ AAL ITTHVL+ GG FVAK+FRG+D+TLL +QL++FF  VT +KP SSR +S E F+VC+ +    P   Y+P M                     P      S R + P++  GDLSGF+
Sbjct:    9 RDVYYRMAKEQGWRARSAFKLMQVDEEFNLLEGVTKAVDLCAAPGSWSQVLSKKLVEN-----QKEGEEAKIVAVDLQAMAPLPGVIQLQGDITKQSTADQIISYFEGERADIVVCDGAPDVTGLHDMDEYIQAQLLLAALNITTHVLRPGGSFVAKIFRGKDITLLYSQLKVFFPKVTCSKPRSSRNSSIEAFIVCQDY---TPPKDYVPNM-------------GDPMLDLAPTDSLGRSNRTIVPFIACGDLSGFD 246
[Close]
BLAST of NO06G03270 vs. NCBI_GenBank
Match: XP_021880372.1 (FtsJ-like methyltransferase-domain-containing protein [Lobosporangium transversale] >ORZ13023.1 FtsJ-like methyltransferase-domain-containing protein [Lobosporangium transversale])

HSP 1 Score: 284.6 bits (727), Expect = 3.100e-73
Identity = 148/259 (57.14%), Postives = 181/259 (69.88%), Query Frame = 0 
Query:    6 RDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQMXXXXXXXXXXXXXXXXXXXXXPAYGGSASGRMVGPYVERGDLSGFE 265
            RD+YYR AKE G+RARSAFKL+Q+D EF+L +GV KAVDLCAAPGSWSQVL+ +L  N     + EGE  +IVAVDLQ MAP+PGV QLQGDIT Q TAD II +F GE+ D+V+CDGAPDVTGLHDMDE++QAQL+ AAL ITTHVL+ GG FVAK+FRG+D+TLL  QL++FF  VT +KP SSR +S E FVVC+ +    P   Y+P M                     P      S R + P++  GDLSGF+
Sbjct:    9 RDVYYRLAKEQGWRARSAFKLMQIDEEFNLLEGVTKAVDLCAAPGSWSQVLSKKLVEN-----QKEGEVAKIVAVDLQAMAPLPGVIQLQGDITKQSTADQIISYFDGEKADIVICDGAPDVTGLHDMDEYIQAQLLLAALNITTHVLRPGGSFVAKIFRGKDITLLYTQLKIFFPKVTCSKPRSSRNSSIEAFVVCQDY---TPPKDYVPNM-------------GTPILDLAPTDAQGRSNRTIVPFIACGDLSGFD 246
[Close]
BLAST of NO06G03270 vs. NCBI_GenBank
Match: OAQ36581.1 (FtsJ-domain-containing protein [Mortierella elongata AG-77])

HSP 1 Score: 283.5 bits (724), Expect = 6.900e-73
Identity = 148/259 (57.14%), Postives = 180/259 (69.50%), Query Frame = 0 
Query:    6 RDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQMXXXXXXXXXXXXXXXXXXXXXPAYGGSASGRMVGPYVERGDLSGFE 265
            RD+YYR AKE G+RARSAFKL+Q+D EF+L +GV KAVDLCAAPGSWSQVL+ +L  N     + EGE  +IVAVDLQ MAP+PGV QLQGDIT Q TAD II +F GE  D+VVCDGAPDVTGLHDMDE++QAQL+ AAL ITTHVL+ GG FVAK+FRG+D+TLL  QL++FF  VT +KP SSR +S E F+VC+ +    P   Y+P M                     P      S R + P++  GDLSGF+
Sbjct:    9 RDVYYRMAKEQGWRARSAFKLMQVDEEFNLLEGVTKAVDLCAAPGSWSQVLSKKLVEN-----QKEGEEAKIVAVDLQAMAPLPGVIQLQGDITKQSTADQIISYFDGEMADIVVCDGAPDVTGLHDMDEYIQAQLLLAALNITTHVLRPGGAFVAKIFRGKDITLLYTQLKVFFPKVTCSKPRSSRNSSIEAFIVCQDY---TPPKDYVPNM-------------GNPLLDLAPTDAQGNSNRTIVPFIACGDLSGFD 246
[Close]
BLAST of NO06G03270 vs. NCBI_GenBank
Match: XP_005108837.1 (PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Aplysia californica] >XP_005108838.1 PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Aplysia californica] >XP_012943753.1 PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Aplysia californica])

HSP 1 Score: 283.1 bits (723), Expect = 9.100e-73
Identity = 150/259 (57.92%), Postives = 182/259 (70.27%), Query Frame = 0 
Query:    6 RDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQMXXXXXXXXXXXXXXXXXXXXXPAYGGSASGRMVGPYVERGDLSGFE 265
            RD+YYRRAKE G+RARSA+KLLQ++ +F +F GV+K VDLCAAPGSWSQVLA +L      G E +    +IVAVDLQ MAPIPGV Q+QGDIT + TA  IIGHF GE+ DLVVCDGAPDVTGLHD+DE++QAQL+ AAL ITTHVLK+GG FVAK+FRG+D+TLL AQL++FF  VTV KP SSR +S E FVVC+G+    P  GYIP M                              R++ P++  GDLSGF+
Sbjct:    9 RDVYYRRAKEEGWRARSAYKLLQINDDFDIFGGVKKVVDLCAAPGSWSQVLAKKL--RGAAGAESDA---KIVAVDLQAMAPIPGVIQIQGDITKKSTAQAIIGHFEGEQADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKSGGTFVAKIFRGKDVTLLYAQLKIFFPEVTVFKPRSSRNSSIEAFVVCQGY---SPPEGYIPNMSNPLLDQQYDLDFNNL----------EGPNRVIVPFLACGDLSGFD 249
[Close]
BLAST of NO06G03270 vs. NCBI_GenBank
Match: XP_021353256.1 (putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Mizuhopecten yessoensis] >XP_021353264.1 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Mizuhopecten yessoensis] >OWF56175.1 tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Mizuhopecten yessoensis])

HSP 1 Score: 282.7 bits (722), Expect = 1.200e-72
Identity = 149/259 (57.53%), Postives = 184/259 (71.04%), Query Frame = 0 
Query:    6 RDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQMXXXXXXXXXXXXXXXXXXXXXPAYGGSASGRMVGPYVERGDLSGFE 265
            RD+YYR AKE G+RARSAFKLLQ++ +F+LFQGV+K VDLCAAPGSWSQVL+ +L      G++ +GE  +IVAVDLQ MAPIPGV QLQGDIT + TA  IIGHF GE+ DLVVCDGAPDVTGLHD+DE++QAQL+ AAL ITTHVLK GG FVAK+FRG+D+TLL +QL++FF  V++ KP SSR +S E FVVC+G+    P  GY P M                              R++ P++  GDLSGF+
Sbjct:    9 RDVYYRLAKEEGWRARSAFKLLQINQDFNLFQGVKKVVDLCAAPGSWSQVLSRKL-----RGEDGKGEDVKIVAVDLQAMAPIPGVIQLQGDITKKSTAQEIIGHFEGEQADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKKGGTFVAKIFRGKDVTLLYSQLKIFFPLVSIFKPRSSRNSSIEAFVVCQGY---APPDGYQPNMSNPLLDHRYDVDFNNL----------EGPNRVIVPFLACGDLSGFD 249
[Close]
BLAST of NO06G03270 vs. NCBI_GenBank
Match: XP_012719091.1 (putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Fundulus heteroclitus] >XP_021172765.1 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Fundulus heteroclitus])

HSP 1 Score: 281.6 bits (719), Expect = 2.600e-72
Identity = 149/260 (57.31%), Postives = 179/260 (68.85%), Query Frame = 0 
Query:    6 RDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEI-EGERERIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQMXXXXXXXXXXXXXXXXXXXXXPAYGGSASGRMVGPYVERGDLSGFE 265
            RD+YYR AKE G+RARSAFKLLQLD EF+LF GV +AVDLCAAPGSWSQVL+ +L      G++   GE  +IVAVDLQ MAP+PGV Q+QGDIT   TA  II HF G+  DLVVCDGAPDVTGLHD+DE++QAQL+ AAL ITTHVLK GG FVAK+FRG+D+TLL +QLR+FF SVT AKP SSR +S E FVVC+ +    P  GY+P M                              R++ P++  GDLS F+
Sbjct:    9 RDIYYRLAKEEGWRARSAFKLLQLDNEFNLFSGVNRAVDLCAAPGSWSQVLSRKLRGREERGEKAGGGEEVKIVAVDLQAMAPLPGVTQIQGDITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLRIFFSSVTCAKPRSSRNSSIEAFVVCQNY---SPPEGYVPNMSNPLLDHSYDVDFNQL----------EGPNRVIVPFLACGDLSAFD 255
[Close]
BLAST of NO06G03270 vs. NCBI_GenBank
Match: XP_002591721.1 (hypothetical protein BRAFLDRAFT_80816 [Branchiostoma floridae] >EEN47732.1 hypothetical protein BRAFLDRAFT_80816 [Branchiostoma floridae])

HSP 1 Score: 281.2 bits (718), Expect = 3.400e-72
Identity = 149/259 (57.53%), Postives = 181/259 (69.88%), Query Frame = 0 
Query:    6 RDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQMXXXXXXXXXXXXXXXXXXXXXPAYGGSASGRMVGPYVERGDLSGFE 265
            RD+YYR+AKE G+RARSAFKL+Q+D EF++  GVQK VDLCAAPGSWSQVL+ RL      GK+ + +  +IVAVDLQ MAPIPGV Q+QGDIT   TA  IIGHF GE+ DLVVCDGAPDVTGLHD+DE++QAQL+ AAL ITTHVLK GG FVAK+FRG+D+TLL +QL++FF  VTVAKP SSR +S E FVVC G+    P  GY P M                              R++ P++  GDLSG++
Sbjct:    9 RDIYYRKAKEEGWRARSAFKLMQIDEEFNVLSGVQKVVDLCAAPGSWSQVLSKRLRGE---GKQ-KSDDVKIVAVDLQAMAPIPGVIQIQGDITKVSTAQEIIGHFSGEQADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKKGGGFVAKIFRGKDITLLYSQLKIFFPDVTVAKPRSSRNSSIESFVVCRGY---SPPEGYTPNMMNPLLDHHYDVDFNSL----------EGVNRVIVPFLACGDLSGYD 250
[Close]
BLAST of NO06G03270 vs. NCBI_GenBank
Match: XP_014774868.1 (PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Octopus bimaculoides] >KOF99535.1 hypothetical protein OCBIM_22015346mg [Octopus bimaculoides])

HSP 1 Score: 280.4 bits (716), Expect = 5.900e-72
Identity = 149/260 (57.31%), Postives = 184/260 (70.77%), Query Frame = 0 
Query:    6 RDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEIEGERE-RIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQMXXXXXXXXXXXXXXXXXXXXXPAYGGSASGRMVGPYVERGDLSGFE 265
            RD+YYR AKE G+RARSAFKLLQ++ +F +F GVQK VDLCAAPGSWSQVL+ +L  NS+     +GE + +IVAVDLQ MAPIPGV Q+QGDIT + TA+ II HF GE+ DLVVCDGAPDVTGLHD+DE++QAQL+ AAL ITTHVLK GG FVAK+FRG+D+TLL +QL++FF  VTV KP SSR +S E FVVCE +    P  GY+P M                          +   R++ P++  GDLSGF+
Sbjct:    9 RDVYYRLAKEEGWRARSAFKLLQINDDFKIFDGVQKVVDLCAAPGSWSQVLSKKLRGNSS-----DGETDTKIVAVDLQAMAPIPGVTQIQGDITKKSTAEEIISHFEGEQADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLKIFFPLVTVYKPRSSRNSSIEAFVVCEKY---SPPEGYLPNMSNPLLDQQYDVDFNNL----------TGPNRIIVPFLACGDLSGFD 250
The following BLAST results are available for this feature:
BLAST of NO06G03270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26321.16.400e-10374.25cell division protein [Nannochloropsis gaditana][more]
XP_005854344.11.100e-10273.88cell division protein [Nannochloropsis gaditana CC... [more]
KFH73845.11.400e-7357.53ribosomal RNA methyltransferase 1 [Mortierella ver... [more]
XP_021880372.13.100e-7357.14FtsJ-like methyltransferase-domain-containing prot... [more]
OAQ36581.16.900e-7357.14FtsJ-domain-containing protein [Mortierella elonga... [more]
XP_005108837.19.100e-7357.92PREDICTED: putative tRNA (cytidine(32)/guanosine(3... [more]
XP_021353256.11.200e-7257.53putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
XP_012719091.12.600e-7257.31putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
XP_002591721.13.400e-7257.53hypothetical protein BRAFLDRAFT_80816 [Branchiosto... [more]
XP_014774868.15.900e-7257.31PREDICTED: putative tRNA (cytidine(32)/guanosine(3... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR029ncniR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000149NSK000149Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03270.1NO06G03270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597606gene_6649Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100078g5gene4207Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03270.1NO06G03270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03270 ID=NO06G03270|Name=NO06G03270|organism=Nannochloropsis oceanica|type=gene|length=4017bp
CCCTCCCTCCACCCCAAAAAATGCTGCATGAGATATCGGCGGTTCATTCC
CCCGCACTCACCCTCACAATCGGGCTGCCTGCGTCCCTCCCGTCAGCAAC
CTGGTCAATGTATGCCTGGGCTATCTTTACAGCTGATGCCTTCCCCACCT
CATTTGCCCCCGACCCCACCCAGAAAAATCCGTTTCGAAGATATCAAACA
CAAACACATCCTTATCGCTCTCCTCTTAATCCACCTGCGCAAAATTCACG
ATCTCCTCTACCTTCATCCTCCCCTTCGCATCGCTAACTTGGAACATCCT
TGGCTCCCGAGGGGCCACCTGCCCTCCCGTCCCTTTCTCTAGGCTTCCCA
AGCTCGTCCAAAACTCATACGGTTCCTCCCCCTCTTCCACCACCTCCATC
CCTCCCTCCTCCCCTTCCTCCATCCCCACCTCCACCTGCTGCGTCAACAT
GACCTCCCCCAGCACCACCGTTGCCTCCCTCTCTGCGGCTTTGCTCCATT
TAATCGTCCTGGGGCAAAGACAAAACAAAACAATCGCGCGAATTGAGATT
TTGGGGCGTTGTGGGCATTTGGACAGCGCATACATTCTCCAGCGTGGTCC
CCTTGACATGAAACAAGGCCGGTGCCAGCAGCAGCAATCGACGCAGTAGT
GGCAGAAGCCTTCCCTTTTTCCTCCATCTTGGACCCTTGTCGCTGTCTGG
CGCTACGAAAGCCGCTCTCCACGCTCCCTGTGTGCACGACCAACTGTCCC
TTAAACAATCGCCGAAAATGCGCGGGCTCCTTCCCTTAAACCACCCTCAC
TTGCACGGGAACCCTTCCCTGCATCCCGTCCAACCCGATGGCCAACAACG
CACACGCGCTCTATTCATCCACACTGCCTCCTGTGCCCTGCCACGTGTAG
GTTATCTGATTCTCCCTCGCCTCCTTTGAACATGTGTACAGAACCAAGTA
GGAATCGCTGCTGAAAAAGTGTCCGTGCTGAGAGGGAGGAACCTCGACCT
TTTCCTTTTTCTCCACACACCACACCTGCACCTTGCCTTTCCCGTTATCC
CCCTCTTTAATTCCATCTCCTTCTCCTGCTGCAGCTGCTGCTGCTGCTCC
TTTATCCAGCATGGCCTTGCTTCAGTCGACTGGATCGCCTTCCGTGGTGG
CGAGGGAGGAGGAAGGGCCACACCGCTGCTGGCGCTGCTGTTGATCCAGC
TGCTCCCCATGTCCATGGGCAAGGGGGCGTTCCACTCAGCAAAATAACTT
CGGAGGGAGGGAAGGAAGGAGGGAGGAAGGCAACAAATCCAAATTCGAAT
TTGAAAGCTTGTTACTTTCTATTTATTGGGAGCAGGGTACATCGAGGATG
ACGGGAATGTAGGGAGGAATCCGACGGACGGAGTAGCCGGCGGGGTCGGA
CATTAATATTAAAGCCCTTACCTGATATGTACCGCCATCTCCCCCCCTTT
CATCACCCGCTTCACGGGCATGTTAATATCGACCGATGGGATTTCTCCAG
GGAGGTGGTCGCCAAGCGTATCCCCCCCTCTTTTTCTTCGGCCGTCGTCC
CTTTCCCCACCCACACAGACACCCCACCTTAACGTCAACTCCCCACTCAT
CTCCGACACACGAACAAGCGATATCTTCTCACTCGCCGTCTCCTCAGCCA
CTATGTCAGCCCCTCCCTTTTTCGTCACAGGCTTCCTCTCCTCCCCAAAT
GCCGTCCCAAAATCCTTGTACTTGTTCTCATCATCCTTCTCCCATTCGTT
GACAAGGATCAAATCTGCACGTCCACTGAGTTCCATATCGCGGATGCGCA
AAATAAGCTCCAAAACCTTAGTCTTCTCGGCTCGATTCGCCTCGGGCACA
TGGTACAAATAGAGTTTAAGTCCCTTGTCCAACATAAAGCAATCGCCCAT
GTTCAGGCTGCTGTGCGCGAGAGGGACTTCCGTGGCATGCGCCATGCGAG
CGCCTTTGATGTGCAGCATGCGGATTGGCCAGACGTCGCGTTCCGCCTTT
CTTAAACCGCTCTTGACCCCCCCAGCCAGGTATCGGAGGTCACCCGTCGT
TTGAAATACGACATAAACACGGCCGACTCGTGCCCCTGTGTCTCACGGTA
CTGCACTGCGACCCCATCCAACGCATCATCGAGTTCCACTGCTGTGAAAG
CAGCCACTCCAATCTCGTCCTGGCTGCTTCGGAGCCCAACCAGAACAGGA
CCGAGTGTTGAAGGGCACTAGACTTTTTCTGTGTAGTAGCTAAGAATGTA
GGCATCGAAAAAGAGCCCCGTCACGGCCTCCTGCCTCACGGGCTTTAGGT
TCTCGATGCGCCATAGCTCGAGCCCCGGGGTGCTGCCAGAGACTCGGAAA
GCTGGGTCGACGGCGGGTAAGGCCACCATCGCTCGCTCATAACAATGCTT
TGGAAGTTGCCTGTGTTGCAGAGAAGTGGAGACGGTGAATGTTGTGAGTT
GGAGAGAACGAGCACACGATACGACCAGGTACCGGCACAGCACAGGCCCT
AGTACATTAATTGCCATCCCTCTGGTGATCAATAATGGCAAAACTTACAC
AGGAAGCCACGCCGACGACAAGCAGTAGAAACGCCGTCGAAAGCCGGAGG
GCGATGTCCGGAGGGCAATAGCTCGTGCGGGCCGTCCGAGACGTAGGCAA
GCTACCATACCTTTGCTTTTGTGCTTTGGTAAAGTCACGCGTCTGCTCAT
TGTCACAGTCAACAATAGAAAAATTTCCCACCCACCTACCCCCGCGACAC
CACAGGAGCCAAGCCCCCCATCCCCCCCGGCAGAGTAAAGTCAGCCAGCC
AAGGCCAAAGCGTCATGGGCAAGGTGGTGCGGGATCTGTATTACCGCAGG
GCCAAAGAAGTGGGCTTCCGCGCTCGCAGCGCCTTCAAGCTGCTGCAATT
GGACACAGAATTCAGCCTCTTTCAAGGCGTACAAAAGGCAGTGGACCTCT
GTGCGGCCCCAGGGAGTTGGAGTCAAGTGTTGGCCACACGGCTCTACCCG
AATAGCACGTTGGGAAAGGAGATCGAGGGGGAACGGGAGCGGATCGTTGC
CGTGGACTTGCAAGAGATGGCGCCGATTCCCGGCGTGCGGCAGCTGCAAG
GAGACATCACCTTGCAGgtgagggagaggggaggaaagtgcgctcggtgt
ggaggtaggcaaatgaagggggaagaggtagagagagggcccggctctgg
cactatattagcatttgcacgatattgttttgaatgaattaatttgcgca
tggaatagcaaggctagaggagtggagggggcgagaaagcgctgttggat
gcggtgtacgtgtcgtgaatgaacccacctcctctacgcatcaatccctt
aataatgttttccttccttttttctcactcctctccgacaccaccatata
gATAACGGCCGACACTATCATCGGACACTTTGGCGGGGAACGGGTGGACC
TGGTGGTGTGTGACGGCGCCCCAGACGTGACGGGCCTACACGATATGGAC
GAATTCCTTCAAGCCCAACTCATGTTTGCCGCACTCACCATCACTACACA
TGTTCTCAAAAATGGAGGCAAATTTGTCGCCAAGGTTTTTAGAGGACGTG
ATCTGACCCTGCTGGCGGCGCAATTGCGTCTGTTTTTTGAGAGTGTGACA
GTTGCAAAACCAGCGAGTAGTCGCGCCAATTCAAGTGAGTGTTTTGTGGT
GTGTGAGGGGTTCTTGGGGCCGGTGCCTGAGCATGGCTACATCCCCCAGA
TGGTCGTGTCAACTTCTACTACCACCGCAACTACGACGGGGGGAGAGGAG
AGGAGAGCACAAGATCCAGCGTATGGCGGAAGCGCGTCGGGAAGGATGGT
GGGGCCCTACGTGGAACGGGGGGATTTGTCGGGTTTCGAGGTAGCAGCAG
CCACCACGTCTTGACATTCGAATAGTGGGGGATATAGCATTTATTCCAAA
TGTGTATTTTAGAAGTAAGAAGGGTGGTGTACAAATAAATAGTAAACCAG
AAATATCACTACTGACC
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protein sequence of NO06G03270.1

>NO06G03270.1-protein ID=NO06G03270.1-protein|Name=NO06G03270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=272bp
MGKVVRDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPG
SWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITL
QITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITT
HVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFV
VCEGFLGPVPEHGYIPQMVVSTSTTTATTTGGEERRAQDPAYGGSASGRM
VGPYVERGDLSGFEVAAATTS*
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Synonyms
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