NO06G03010, NO06G03010 (gene) Nannochloropsis oceanica

Overview
NameNO06G03010
Unique NameNO06G03010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1182
Alignment locationchr6:858700..859881 +

Link to JBrowse

Properties
Property NameValue
DescriptionIntegral membrane protein TerC
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:858700..859881 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR022369Integral_membrane_TerC_rswitch
IPR005496Integral_membrane_TerC
Homology
BLAST of NO06G03010 vs. NCBI_GenBank
Match: EWM26331.1 (Integral membrane protein TerC [Nannochloropsis gaditana])

HSP 1 Score: 562.4 bits (1448), Expect = 1.100e-156
Identity = 305/390 (78.21%), Postives = 328/390 (84.10%), Query Frame = 0
Query:   11 GSGCGILRSNLLVLVLAAATMVQRIEGFMLPLQS-SFSPSSSSLSLASACAFASFRP------SSVSIRRSFAFPSLAATGPQKTEQERTPQIKAAGGAGEFDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKGPDSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDYQGRVLSWGIFGAMAMRALMVLAGVEAIENFRVVLLAFAGILVFTSVKLLSEDDSEEGEEDLAENQIVKFARSLITTTDDYDGPNFFTEVEGRGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFVVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGMKLGGEYFGFEVSNVVSLGVIASVLGSGVWASLYLKPKEEGQ 394
            G G GI    + VLVL A TM  RI GF+LP    + +P    L L  +C  +   P      ++   RR+ + P   A GP+K E E  P+IKA G AGEFDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKG DSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTD+QGRVLSWGIFGAMAMRA+MV AGVEAIENFRVVLLAFAGIL+FTSVKLL+ED+ E GEEDLA+NQIVKFARSLITT D YDGPNFFTEV G+GRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPF+VYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVG+KLG EYFGFEVSN VSLGVI S+LGSGVWASLYLKP  EG+
Sbjct:   17 GRGLGI---RVCVLVL-AMTMPHRIGGFVLPKPGVTLAPRIPQL-LVPSCTPSFSAPLVAAPRNAARRRRASSMPPFHALGPKKQESESVPKIKAVGNAGEFDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKGADSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDFQGRVLSWGIFGAMAMRAVMVFAGVEAIENFRVVLLAFAGILIFTSVKLLAEDEGEGGEEDLADNQIVKFARSLITTVDTYDGPNFFTEVPGQGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGLKLGAEYFGFEVSNAVSLGVITSLLGSGVWASLYLKPDREGR 401          
BLAST of NO06G03010 vs. NCBI_GenBank
Match: XP_005854349.1 (hypothetical protein NGA_0191400 [Nannochloropsis gaditana CCMP526] >EKU22015.1 hypothetical protein NGA_0191400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 556.2 bits (1432), Expect = 8.000e-155
Identity = 281/316 (88.92%), Postives = 294/316 (93.04%), Query Frame = 0
Query:   78 PSLAATGPQKTEQERTPQIKAAGGAGEFDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKGPDSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDYQGRVLSWGIFGAMAMRALMVLAGVEAIENFRVVLLAFAGILVFTSVKLLSEDDSEEGEEDLAENQIVKFARSLITTTDDYDGPNFFTEVEGRGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFVVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGMKLGGEYFGFEVSNVVSLGVIASVLGSGVWASLYLKPKEEGQ 394
            P   A GP+K E E  P+IKA G AGEFDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKG DSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTD+QGRVLSWGIFGAMAMRA+MV AGVEAIENFRVVLLAFAGIL+FTSVKLL+ED+ E GEEDLA+NQIVKFARSLITT D YDGPNFFTEV G+GRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPF+VYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVG+KLG EYFGFEVSN VSLGVI S+LGSGVWASLYLKP  EG+
Sbjct:    2 PPFHALGPKKQESESVPKIKAVGNAGEFDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKGADSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDFQGRVLSWGIFGAMAMRAVMVFAGVEAIENFRVVLLAFAGILIFTSVKLLAEDEGEGGEEDLADNQIVKFARSLITTVDTYDGPNFFTEVPGQGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGLKLGAEYFGFEVSNAVSLGVITSLLGSGVWASLYLKPDREGR 317          
BLAST of NO06G03010 vs. NCBI_GenBank
Match: EJK75512.1 (hypothetical protein THAOC_02764 [Thalassiosira oceanica])

HSP 1 Score: 307.0 bits (785), Expect = 8.500e-80
Identity = 157/278 (56.47%), Postives = 211/278 (75.90%), Query Frame = 0
Query:  116 YRDAFVKTGLSVGSALLFGLGVWAWKGPDSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDYQGRVLSWGIFGAMAMRALMVLAGVEAIENFRVVLLAFAGILVFTSVKLLSEDDSEEGEEDLAENQIVKFARSLITTTDDYDGPNFFTEVEGRGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFVVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGMKLGGEYFGFEVSNVVSLGVIASVLGSGVWASLYLKPKEEGQ 394
            Y+ A  +T L VG A+ FG G+    GPD+  E++AGYLVEQSLSVDNLFVF++LFEYF+VP   Q RVL+WGI+GA+ MRA+M+  G  A++ FR +LL FA ILV++S K L   D +E EEDL +N IVKF+R L  +TD +DG NFFT V+G  ++ATPL + +I +E+SDVVFAVDS+PAVFGVT++P VV++SN+FAI+GLRSLYT+L+ A  DL YL+PAV ++LG +G K+  EYFG EV   ++LGV+A+VL  GV  S++ + +EEGQ
Sbjct:   65 YQQAIQRTLLWVGLAVAFGSGLGVLVGPDTAEEFFAGYLVEQSLSVDNLFVFLLLFEYFQVPLRSQDRVLNWGIYGAIVMRAVMIGVGAAALKEFRAILLVFAAILVYSSAKTLIPGDEDEEEEDLNDNAIVKFSRKLFDSTDQFDGSNFFTMVDG-VKMATPLFICMIALEISDVVFAVDSIPAVFGVTENPLVVFSSNMFAIMGLRSLYTILSQAASDLKYLEPAVGVVLGFIGSKMIAEYFGTEVPTEIALGVVATVLSGGVGLSVWERRQEEGQ 341          
BLAST of NO06G03010 vs. NCBI_GenBank
Match: XP_005853957.1 (hypothetical protein NGA_0432601 [Nannochloropsis gaditana CCMP526] >EKU22401.1 hypothetical protein NGA_0432601 [Nannochloropsis gaditana CCMP526] >EWM25697.1 Integral membrane protein TerC [Nannochloropsis gaditana])

HSP 1 Score: 299.3 bits (765), Expect = 1.800e-77
Identity = 157/288 (54.51%), Postives = 208/288 (72.22%), Query Frame = 0
Query:   97 KAAGGAGEFDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKGPDSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDYQGRVLSWGIFGAMAMRALMVLAGVEAIENFRVVLLAFAGILVFTSVKLLSEDDSEEGEEDLAENQIVKFARSLITTTDDYDGPNFFTEVEGRGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFVVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGMKLGGEYFGFEVSNVVSLGVIASVLGSGVWASL 385
            KA G  G+   +I   E  Y  A  +T L+VG+A  FG G+W  +G    +E++AGYL+E+SLSVDN+FVF++LFEYFKVP +YQ R LSWGI GA+AMR +M+  GV AI+ FR V+L FAG+L+ ++ KLL+E   E GEEDL+ N +V +A+ L+   D+YDG NFFT   G+ R ATPL + LIC+ELSD VFAVDS+PAV GV+KDP +VY+SNIFAI+ LRSLYT++A A+  L Y+KP+VAL+L  VG K+  E+F  EV   VSL V+ S+LG G+  SL
Sbjct:   87 KAVGKRGKSPAAIDAGE-AYATAVRRTLLAVGAAFAFGFGLWFMEGRQPAMEFFAGYLIEESLSVDNIFVFIMLFEYFKVPIEYQSRALSWGIMGAVAMRGIMIFVGVAAIQRFRWVVLLFAGVLLGSAFKLLAEVGHEGGEEDLSNNLLVAWAKKLVHAVDEYDGDNFFTRRNGK-RYATPLFMCLICIELSDFVFAVDSIPAVLGVSKDPLIVYSSNIFAIMALRSLYTLVATAVNSLEYIKPSVALVLAFVGGKMVAEFFHVEVPISVSLAVVMSLLGGGIGLSL 372          
BLAST of NO06G03010 vs. NCBI_GenBank
Match: XP_022841195.1 (Integral membrane protein TerC,riboswitch-linked [Ostreococcus tauri] >CEG01834.1 Integral membrane protein TerC,riboswitch-linked [Ostreococcus tauri])

HSP 1 Score: 299.3 bits (765), Expect = 1.800e-77
Identity = 157/260 (60.38%), Postives = 203/260 (78.08%), Query Frame = 0
Query:  127 VGSALLFGLGVWAWKGPDSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDYQGRVLSWGIFGAMAMRALMVLAGVEAIENFRVVLLAFAGILVFTSVKLLSEDDSEEGEEDLAENQIVKFARSLITTTDDYDGPNFFTEVEGRGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFVVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGMKLGGEYFGFEVSNVVSLGVIASVLGSGVWASLYL 387
            +G +  FG  + A  G D+  EY+AGYL+EQSLSVDNLFVFV+LFEYF+VP   Q  VL++GIFGA+ MRA+M++AGVE IENF+ +LL FAGIL+F+S KL+S+ DS+E EED+A+N +VKF   L   +DDYDG NFFT V+   ++ATPLLLVL  VE+SDVVFAVDS+PAVFGVTKDPF+VYTSN+FAIL LR LYT+++ A+ +L YL+ AVAL+LG +G K+  EY G E+   +SL V+ ++L  GV ASLYL
Sbjct:   16 LGMSCAFGAAIGATSGSDAASEYFAGYLLEQSLSVDNLFVFVLLFEYFQVPPARQKVVLNYGIFGALIMRAVMIVAGVELIENFKPILLVFAGILIFSSYKLISQGDSDE-EEDMADNAVVKFCSKLFDVSDDYDGDNFFT-VQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISTAVGELKYLQTAVALVLGFIGSKMVVEYTGVEIPTELSLAVVVTLLSGGVAASLYL 273          
BLAST of NO06G03010 vs. NCBI_GenBank
Match: XP_002180515.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC47923.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 297.4 bits (760), Expect = 6.700e-77
Identity = 153/265 (57.74%), Postives = 204/265 (76.98%), Query Frame = 0
Query:  127 VGSALLFGLGVWAWKGPDSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDYQGRVLSWGIFGAMAMRALMVLAGVEAIENFRVVLLAFAGILVFTSVK----LLSEDDSEEGEEDLAENQIVKFARSLITTTDDYDGPNFFTEVEGRGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFVVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGMKLGGEYFGFEVSNVVSLGVIASVLGSGVWASLYLK 388
            VG+A  FG  VWA  G +SG E++AGYL+EQSLSVDNLFVF++LFEYFKVP  +Q RVL+WGI+GA+ MR +M+  G  A+E +  +LL FA ILV+ S K    L++ D+ +E EED  EN IV+FARS+  +T++YDG  FFT+V+G  R ATPL + ++ VE+SDVVFAVDS+PAVFGVT+DP +V+TSN+FAI+GLRSLYT+L+ A  DL YL+PAVAL+LG +G K+  EYFG+ +   V+L V+ S+LG+GV AS+Y K
Sbjct:    1 VGAACTFGGVVWATMGSESGAEFFAGYLIEQSLSVDNLFVFLLLFEYFKVPLAFQDRVLNWGIYGAIVMRGIMIGLGAAALEQYHGILLVFAAILVYGSGKFFWGLVTNDEDDEVEEDPGENTIVRFARSVFPSTEEYDGDRFFTQVDGI-RKATPLFVCMVAVEISDVVFAVDSIPAVFGVTEDPIIVFTSNLFAIMGLRSLYTILSKAATDLKYLEPAVALVLGFIGCKMIAEYFGYVIPTNVALLVVGSLLGTGVGASVYDK 264          
BLAST of NO06G03010 vs. NCBI_GenBank
Match: XP_001421511.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO99804.1 predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 297.4 bits (760), Expect = 6.700e-77
Identity = 161/265 (60.75%), Postives = 204/265 (76.98%), Query Frame = 0
Query:  127 VGSALLFGLGVWAWKGPDSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDYQGRVLSWGIFGAMAMRALMVLAGVEAIENFRVVLLAFAGILVFTSVKLLSEDDSEEGEEDLAENQIVKFARSLITTTDDYDGPNFFTEVEGRGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFVVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGMKLGGEYFGFEVSNVVSLGVIASVLGSGVWASLYLKPKEE 392
            +G +  FG G+ A +G D   EY+AGYL+EQSLSVDNLFVFV+LFEYFKVP + Q RVL++GI GA+ MRA+MV AGVE IENF+ +LL FAGIL+F+S KLL+E   EE EED+ +N IVKF  + +  ++DYDG NFFT V+   ++ATPLLLVL  VE+SDVVFAVDS+PAVFGVTKDPF+VYTSN+FAIL LR LYT+++ A+ +L YL+ AVAL+LG +G K+  EY G EV    SL V+ ++LG GV ASL L P E+
Sbjct:   18 LGVSCAFGAGIGAVEGADKASEYFAGYLLEQSLSVDNLFVFVLLFEYFKVPPERQTRVLNYGIVGALVMRAVMVGAGVELIENFQPILLVFAGILIFSSYKLLAE--GEEEEEDMGDNAIVKFVGNFLEVSEDYDGDNFFT-VQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISKAVGELKYLQTAVALVLGFIGAKMIVEYAGVEVPTEASLAVVVTMLGGGVGASLML-PSED 278          
BLAST of NO06G03010 vs. NCBI_GenBank
Match: GAX26895.1 (hypothetical protein FisN_9Lh191 [Fistulifera solaris])

HSP 1 Score: 290.0 bits (741), Expect = 1.100e-74
Identity = 150/287 (52.26%), Postives = 212/287 (73.87%), Query Frame = 0
Query:  105 FDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKGPDSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDYQGRVLSWGIFGAMAMRALMVLAGVEAIENFRVVLLAFAGILVFTSVKLLSEDDSEEGEEDLAENQIVKFARSLITTTDDYDGPNFFTEVEGRGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFVVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGMKLGGEYFGFEVSNVVSLGVIASVLGSGVWASLYLKPKEE 392
            F  ++   ++ Y++A ++T   V  A +FG  +WA  G   G E++AGYLVEQSLSVDNLFVF++LFEYFKVP   Q RVL+WGI+GA+ MRA+M+  G  A++ F  +LL FA IL+++S K    D+  E EED ++N IVKF+RSLI +TD++ G  FFT +E   + ATPL + +I VE+SDVVFAVDS+PAVFGVT++P +V++SN+FAI+GLRS+YT+L+ A  DL YL+PAVAL+LG +G K+  EYF +E+   ++LGV+AS+L SGV AS++ K + +
Sbjct:   99 FSVTLEKDDYSYKEAVLRTLGWVSLAGVFGCVLWAVGGSTVGEEFFAGYLVEQSLSVDNLFVFLLLFEYFKVPVKLQDRVLNWGIYGAIIMRAVMIGLGAAALQQFHAILLVFASILIYSSAKFFIGDEEGE-EEDPSQNTIVKFSRSLIPSTDEFHGKKFFT-IEDGMKKATPLFICMIAVEISDVVFAVDSIPAVFGVTENPLIVFSSNMFAIMGLRSMYTILSKAATDLKYLEPAVALVLGFIGSKMVAEYFNYEIPTNIALGVVASLLISGVGASIWDKQQRK 383          
BLAST of NO06G03010 vs. NCBI_GenBank
Match: XP_002505318.1 (hypothetical protein MICPUN_69613, partial [Micromonas commoda] >ACO66576.1 hypothetical protein MICPUN_69613, partial [Micromonas commoda])

HSP 1 Score: 287.3 bits (734), Expect = 7.000e-74
Identity = 150/261 (57.47%), Postives = 199/261 (76.25%), Query Frame = 0
Query:  127 VGSALLFGLGVWAWKGPDSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDYQGRVLSWGIFGAMAMRALMVLAGVEAIENFRVVLLAFAGILVFTSVKLLSEDDSEEGEEDLAENQIVKFARSLITTTDDYDGPNFFTEVEGRGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFVVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGMKLGGEYFGFEVSNVVSLGVIASVLGSGVWASLYLK 388
            VG+A+ FGLGV A  G +   E++AGYL+EQSLSVDNLFVFV++F+YFKVP   Q RVL++GI+GAM MRA M++AG EA+ NF+ +LL FAG+L+F+S KL++E + EE EED++EN IVKF  +L+  + DYDG NFFT  E   ++ATPLLL L  +ELSDVVFAVDS+PAVFG+T+DPF+VY+SNIFAI+GLRSL+  +A  + +L YL+ AVA +LG VG K+  E+ G E+    SL V+  +LG+GV  SL  K
Sbjct:    5 VGAAVAFGLGVGAVMGAEKAEEFFAGYLLEQSLSVDNLFVFVLVFDYFKVPLASQPRVLNYGIWGAMVMRAAMIIAGYEAVTNFKPILLVFAGVLIFSSYKLIAEGEEEE-EEDMSENAIVKFCSNLLPVSKDYDGENFFT-TENGAKIATPLLLCLCVIELSDVVFAVDSIPAVFGITEDPFIVYSSNIFAIMGLRSLFAFVATMVAELEYLQTAVAAVLGFVGCKMVVEFGGVEIPTEASLAVVVGMLGAGVALSLAKK 263          
BLAST of NO06G03010 vs. NCBI_GenBank
Match: GAQ87538.1 (integral membrane protein [Klebsormidium nitens])

HSP 1 Score: 287.3 bits (734), Expect = 7.000e-74
Identity = 153/280 (54.64%), Postives = 198/280 (70.71%), Query Frame = 0
Query:  112 PEHPYRDAFVKTGLSVGSALLFGLGVWAWKGPDSGLEYYAGYLVEQSLSVDNLFVFVVLFEYFKVPTDYQGRVLSWGIFGAMAMRALMVLAGVEAIENFRVVLLAFAGILVFTSVKLLSEDDSEEGEEDLAENQIVKFARSLITTTDDYDGPNFFTEVEGRGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFVVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGMKLGGEYFGFEVSNVVSLGVIASVLGSGVWASLYLKPKEE 392
            P    + A +     V +A +FG GV   +GP    EY+AGY++EQSLSVDNLFVFV++F+YF+VP DYQ RVLSWGI GA+  RAL++  G   ++ F  V L FAGIL+F+S KLL  DD E  +EDL++N IVK    LI +TD YDG NFFT V+G  R ATPLLL L  VELSD+ FAVDS+PAVFGVT DPF+V++SNIFAI+ LRSLYT++A  M DL +L+P++A++LG VG KL  E+ G +V    SL V+  VLGSG++ SL    ++E
Sbjct:  166 PISEQKTALITVAFWVAAAAVFGAGVGIVQGPGKASEYFAGYILEQSLSVDNLFVFVLIFKYFQVPLDYQNRVLSWGIAGAVVFRALLIGLGAATVQEFTAVNLVFAGILLFSSFKLLQGDDDE--DEDLSDNYIVKTCSKLINSTDYYDGNNFFTVVDGVKR-ATPLLLTLAVVELSDIAFAVDSIPAVFGVTHDPFIVFSSNIFAIICLRSLYTLVAGVMKDLRFLQPSIAIVLGFVGAKLIAEFAGLQVPTESSLAVVIGVLGSGIFLSLKFPEEKE 442          
The following BLAST results are available for this feature:
BLAST of NO06G03010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26331.11.100e-15678.21Integral membrane protein TerC [Nannochloropsis ga... [more]
XP_005854349.18.000e-15588.92hypothetical protein NGA_0191400 [Nannochloropsis ... [more]
EJK75512.18.500e-8056.47hypothetical protein THAOC_02764 [Thalassiosira oc... [more]
XP_005853957.11.800e-7754.51hypothetical protein NGA_0432601 [Nannochloropsis ... [more]
XP_022841195.11.800e-7760.38Integral membrane protein TerC,riboswitch-linked [... [more]
XP_002180515.16.700e-7757.74predicted protein, partial [Phaeodactylum tricornu... [more]
XP_001421511.16.700e-7760.75predicted protein [Ostreococcus lucimarinus CCE990... [more]
GAX26895.11.100e-7452.26hypothetical protein FisN_9Lh191 [Fistulifera sola... [more]
XP_002505318.17.000e-7457.47hypothetical protein MICPUN_69613, partial [Microm... [more]
GAQ87538.17.000e-7454.64integral membrane protein [Klebsormidium nitens][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR029ncniR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000154NSK000154Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03010.1NO06G03010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597547gene_6633Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100078g1gene4211Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03010.1NO06G03010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03010 ID=NO06G03010|Name=NO06G03010|organism=Nannochloropsis oceanica|type=gene|length=1182bp
ATGCTGAGACCATCCCTAATAGGCAGCAGCGGCAGCGGCTGTGGGATCCT
CAGATCAAACCTCCTCGTCCTAGTCTTGGCGGCTGCCACTATGGTCCAGA
GAATAGAGGGCTTCATGCTACCGCTGCAATCCTCCTTCTCCCCCTCCTCA
TCTTCCCTTTCCCTCGCTTCTGCCTGTGCTTTTGCCTCCTTCCGCCCGTC
CTCGGTATCAATAAGAAGAAGCTTTGCATTCCCCTCCCTCGCCGCTACGG
GCCCCCAAAAAACCGAGCAGGAACGCACGCCCCAAATCAAAGCGGCAGGA
GGCGCCGGGGAGTTCGATGGCTCCATATGGCACCCGGAGCATCCATACCG
TGATGCCTTCGTCAAGACGGGCTTGAGCGTGGGCTCGGCGTTGTTGTTTG
GTTTGGGTGTGTGGGCGTGGAAGGGGCCTGATAGCGGCCTCGAGTACTAT
GCAGGGTACCTGGTTGAACAATCCTTGTCAGTCGACAACCTCTTTGTGTT
TGTCGTACTCTTTGAATATTTCAAGGTGCCCACTGACTACCAGGGAAGAG
TGCTGAGTTGGGGCATTTTTGGGGCCATGGCAATGAGGGCTCTCATGGTC
TTAGCGGGGGTGGAGGCAATCGAAAATTTTCGAGTGGTTCTCCTTGCATT
CGCTGGCATCCTAGTGTTTACCTCTGTGAAGCTGCTGTCGGAGGATGACA
GTGAGGAGGGAGAGGAGGATTTGGCGGAAAATCAGATCGTAAAGTTTGCG
CGGTCCTTGATCACAACGACTGATGATTATGATGGGCCGAATTTTTTCAC
GGAGGTGGAAGGCAGGGGACGGGTGGCGACTCCTCTGCTCCTCGTCCTGA
TCTGCGTCGAGCTGTCCGATGTTGTGTTTGCGGTCGACTCGGTGCCGGCA
GTGTTCGGTGTGACGAAGGATCCTTTCGTTGTTTATACGTCGAATATTTT
CGCGATTCTGGGCTTGAGATCTTTGTACACCGTCCTGGCCAATGCGATGG
TGGACCTGCCTTACCTCAAGCCGGCCGTGGCATTGATTTTGGGGCTGGTG
GGGATGAAGCTGGGAGGGGAGTACTTTGGTTTTGAGGTGTCGAATGTCGT
GTCGCTAGGGGTCATAGCTTCGGTGTTGGGCTCGGGGGTGTGGGCGAGTT
TGTATTTGAAACCCAAGGAGGAAGGACAATAG
back to top

protein sequence of NO06G03010.1

>NO06G03010.1-protein ID=NO06G03010.1-protein|Name=NO06G03010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp
MLRPSLIGSSGSGCGILRSNLLVLVLAAATMVQRIEGFMLPLQSSFSPSS
SSLSLASACAFASFRPSSVSIRRSFAFPSLAATGPQKTEQERTPQIKAAG
GAGEFDGSIWHPEHPYRDAFVKTGLSVGSALLFGLGVWAWKGPDSGLEYY
AGYLVEQSLSVDNLFVFVVLFEYFKVPTDYQGRVLSWGIFGAMAMRALMV
LAGVEAIENFRVVLLAFAGILVFTSVKLLSEDDSEEGEEDLAENQIVKFA
RSLITTTDDYDGPNFFTEVEGRGRVATPLLLVLICVELSDVVFAVDSVPA
VFGVTKDPFVVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLV
GMKLGGEYFGFEVSNVVSLGVIASVLGSGVWASLYLKPKEEGQ*
back to top
Synonyms
Publications