NO06G03000, NO06G03000 (gene) Nannochloropsis oceanica

Overview
NameNO06G03000
Unique NameNO06G03000
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4704
Alignment locationchr6:855299..860002 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:855299..860002 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G03000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR029ncniR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000155NSK000155Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03000.1NO06G03000.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|651669gene_6632Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03000.1NO06G03000.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03000 ID=NO06G03000|Name=NO06G03000|organism=Nannochloropsis oceanica|type=gene|length=4704bp
GAAAAACGTCTGCACCTGACAACAACGACCCACCTTCCTCGACACATGAC
CAATGAGCATTTTTTCTTCTTCATCTTCTCTGCTTCCTCGCTGCAGCCAG
CGTGCTCGTCATTCACCATTCCTATTGTCCTTCCTCCTTGGGTTTCAAAT
ACAAACTCGCCCACACCCCCGAGCCCAACACCGAAGCTATGACCCCTAGC
GACACGACATTCGACACCTCAAAACCAAAGTACTCCCCTCCCAGCTTCAT
CCCCACCAGCCCCAAAATCAATGCCACGGCCGGCTTGAGGTAAGGCAGGT
CCACCATCGCATTGGCCAGGACGGTGTACAAAGATCTCAAGCCCAGAATC
GCGAAAATATTCGACGTATAAACAACGAAAGGATCCTTCGTCACACCGAA
CACTGCCGGCACCGAGTCGACCGCAAACACAACATCGGACAGCTCGACGC
AGATCAGGACGAGGAGCAGAGGAGTCGCCACCCGTCCCCTGCCTTCCACC
TCCGTGAAAAAATTCGGCCCATCATAATCATCAGTCGTTGTGATCAAGGA
CCGCGCAAACTTTACGATCTGATTTTCCGCCAAATCCTCCTCTCCCTCCT
CACTGTCATCCTCCGACAGCAGCTTCACAGAGGTAAACACTAGGATGCCA
GCGAATGCAAGGAGAACCACTCGAAAATTTTCGATTGCCTCCACCCCCGC
TAAGACCATGAGAGCCCTCATTGCCATGGCCCCAAAAATGCCCCAACTCA
GCACTCTTCCCTGGTAGTCAGTGGGCACCTTGAAATATTCAAAGAGTACG
ACAAACACAAAGAGGTTGTCGACTGACAAGGATTGTTCAACCAGGTACCC
TGCATAGTACTCGAGGCCGCTATCAGGCCCCTTCCACGCCCACACACCCA
AACCAAACAACAACGCCGAGCCCACGCTCAAGCCCGTCTTGACGAAGGCA
TCACGGTATGGATGCTCCGGGTGCCATATGGAGCCATCGAACTCCCCGGC
GCCTCCTGCCGCTTTGATTTGGGGCGTGCGTTCCTGCTCGGTTTTTTGGG
GGCCCGTAGCGGCGAGGGAGGGGAATGCAAAGCTTCTTCTTATTGATACC
GAGGACGGGCGGAAGGAGGCAAAAGCACAGGCAGAAGCGAGGGAAAGGGA
AGATGAGGAGGGGGAGAAGGAGGATTGCAGCGGTAGCATGAAGCCCTCTA
TTCTCTGGACCATAGTGGCAGCCGCCAAGACTAGGACGAGGAGGTTTGAT
CTGAGGATCCCACAGCCGCTGCCGCTGCTGCCTATTAGGGATGGTCTCAG
CATCCTGATACTGCTTGGAAAGGGCGGCGTGGTGTGGCAATCCTCGTCGC
GCTCCTCCTATGTTATGCAATGTTGGGATAGAGCGCGAGAGTGAGCCGTG
CACTGGTGATGATGACGACGAAGGTGAGGGTAAGTGGTCTATAGTGCTGC
TGCTTCGATTGGCCAAACAGCCCGCCCCACCCACGCTCAAACCGGCTATG
ATTACGTAGCATGGTAATGGCGTCGAGCCTGGAGTGTGTGGAAGTTTTAC
GAGTAGCTAAAACTGCGTAGTCTCGGCTTGTGTACGTGGTGCTGTGAGCG
AGGCTGTCAGCGAAGCGAAGCGTTGGCGCCTCCGCTCCTTCCGAAGTAAA
CCAGTAATACGAGTAATTACATACATCGAACAGAAGCTGCACACATAGGC
CCCACGACTGTTCCCAAGAACATCAAGAAATCACGCACTCGAATGTCCCC
CTCCCTTCGCAAAAAAAAACTCCACTCCATGAACTCTAAAACTCTGACCA
CTCCGAACACAGGCCCTCATACCATACGGGCACAGGGGAGGGTGAAAGCC
GGACCAGTGCTTGCCTGCATCAGTGCATAGGAAGCACTTTCAAGAAGCTA
TGTATTCTCTCTGCTTTCCCCTGTCCACCAGTGACGGTGGCATTGGTGGC
GCAAGCAGCAGCAATAGCAGCAGAGTAAACATGCCACCGCGACCACAGCA
GTACCATCCCCTGCAAGGGAACCATAGATATCTACTCAACACCACCACAA
CATCAATCATCACAAAAATCTCCGGAGGAGGGGCAGGAGGAGAGGCAGGA
GGAAGAGGAGGCCCAGCCAAACGCGCCCGCCTCGACACAGCAGCTGTAAG
CCGCCCGACCCTCCTTAGGCCGCCTCTGCATCATCCGGGGCGGGAGTGGG
AGGCCGCCATGGCTATGGAGGCCGTGCATCAAGTGAGGTTATTGGACAAA
TGCCAGCGGACATTGACGGCATTGCCTGATCGCTTGGAAGAGGCTCTGAT
GGGGCCGCGGCGGCGGCGACGACGACGACGACGACAACAACGGGCACTGG
GGGAAAAAGAGGAGAAAGATGAGGAGAGGACGAGGAAGAGAGGCAGCAGT
GGTAGTGATCACATGCTGCTGGATGAAGAGATAGAGCTAGCCCTCTTCGC
CGTACACGACACGAGCTCCTTCCACGTCCCTGCGGTAGCAGCAGCAGCAG
CAGCAGCTGTACCGACAGCCTCCAGTCCATCGCAGTGGATGGTTGAAGAT
GGCATCATGAGGGCCAAGCAGGGCCTAGAGGAATTGAGGCAGGAAGTGTG
TGAGAGGCCATTGCGAGGTCATCACGTAGAGGAGCAGATTGGAGAGAAGA
AGGGAGAAACAGGAGGAGAATCGATGGTCGAAAAAGGTATGAATAAGAGG
AAAGGAATTAGGGAGGACGAAAAGCAGGAGGAACTGGAGGGGAAGAAGGG
AGAAGGAATTTTGATGGCGGAGGAAGAACAGAGACAGGGAGTAGAGGAGG
AGCAGCAGGAGGAGGAGAGCGTTGTTGAAATTTTTGATGATGACAAGGGT
GGGAAGGAGGAGGAAACTGAAGAGGATGGAGAGGAGGAAGAGGAGGAAGG
AGAAGGGTTTGAGGTGCGTCTAGAGGAGGAAGGAGAGGAGGAGGAGGAGG
AGGAGGAGGAGGATGATGAGGAGGAGGTAGGAGGGGACGAGCAGGTAGAG
GAGAAGAGTGTTGTTCAGATTATGGATGATGATGACGCGGGGGAGGAGGA
GGGGGAGGGAAGTGAAGGGGAGGAAGAGGAAGAGGAGGAAGAAGAGGGAT
TCGAAGTGGGTCTAGGGGAGGAGGAGGAGGAGGAGGAGCCGGAGGATGAA
GGGATGGAGGAGGGGAAGTGGCTTGAGTCGACTTCCTCGGACGCAGCTTG
TGCTGGTCTAGAAGAGGAGGGCGAGGACAAGGATGGAGTAGGGGAGGGGG
AAGCGGTTGGGGTGCTGATTAATGGGGACAATGCCCTCGTGTCCGCCTCA
GCAGTAGTAGCAGCAGCTTTGAAGATACGGCAGGAGCAACTGCAAAAAGA
ACACCAGGATGAGAACGTAAAGGAAGGAGAGGAGGAGCGACAGTGGCCGG
CGTTAGTCATGTCGCAGCAGCATGAGCAGCAGCGGCTGCAGCTGCTCCTG
CAGGAGAAAGGGAATGACGAGGAAGAGCGGCAGTGGCCCGCATCAATCAT
GATACAGCAGCAACAGGAGGGAGAGGGAGATGAACTTGAGAACGGGGAAG
ACGATCTCGATATTGAGGAGGAGGAGGAGGACGAGGATGACAACGAGGAC
GAGGACGAGGACGAGGACGAGGACGAGGACGAGGAAGAGCAGCTGGGTCA
GTTTTTCTGGGGGCCGCCTGCGAGTCTTAGTGGTAGGGGGAAGGGGAGGA
GGAGGGAAGGAGGAAGGGTGAGGAGCAGAAAGGGGGAAGCTTTGCCGGAG
GGGGTGAGGACGAGCTTGCCACCGTTGGGGAGCGATGAGGAGGAGGAAGA
GGAGGAGTCTAGTGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGAGG
AGAAGGAGGAGgtggaggaggaggtagaaggggaggaagagggggaaggc
gagagagattacgatgagagttcgagtggaaaggaggaggaggaagaaga
agagggagaagaaggggaagaggaggaggaggaaatcgacgacgacgagg
aggaagaaggtgggttgaggagcagtggcagtagtgaggcgagtgaagtg
ctagcccagcttgatgacccctttgcggtggctgtaccccggttaaatgt
ggctttgccgcattctttatttgtgggaggaagccgagggaggagtgtgc
ggagggtggtgccgtcgaggttaggaccgaggagggaaggaggaggagga
ggaggaggagaaggaggagAAGGAATGAGGTCTGCGGTGGTGTCAGTGCA
TGAGAAGAAGGGGGGGAAGAAGGGAGGGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGAGGAGGAAGGAGGAAGAGGCGGTTAATGCTGGCTCTTCGGAA
AGAGAGCATGAAATGGAGGAGGAAGGAGAGGAGGAGGGAGGAGATTTCGG
GGAGGGAGGAGATTTCGGGGAGGAGGATGAGACACAGTCGCCTTTGCAGG
AGGAAAAGGATAAGAGTAAGTCTGAAGGGGAGGATGGGGTGGAAGGGGAG
GAGGAGAGGGAGGAGGAAGAGCAGCGTGATGGTGGTGACAATGGAGACAT
GGAAGTGATTGAGTGAAGGAGAGAAGAGAGAAAGAGATATGGAGAGAGGT
GGTATTGAGATAAATGTGGTCTCAAAAGCAGTGTATATCGTGCATAAAAA
GAATGTTGACAGTGGAAATTAAATCAGGAGGAAGAGGCGACAGGGACAAA
GGAA
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protein sequence of NO06G03000.1

>NO06G03000.1-protein ID=NO06G03000.1-protein|Name=NO06G03000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=657bp
MYSLCFPLSTSDGGIGGASSSNSSRVNMPPRPQQYHPLQGNHRYLLNTTT
TSIITKISGGGAGGEAGGRGGPAKRARLDTAAVSRPTLLRPPLHHPGREW
EAAMAMEAVHQVRLLDKCQRTLTALPDRLEEALMGPRRRRRRRRRQQRAL
GEKEEKDEERTRKRGSSGSDHMLLDEEIELALFAVHDTSSFHVPAVAAAA
AAAVPTASSPSQWMVEDGIMRAKQGLEELRQEVCERPLRGHHVEEQIGEK
KGETGGESMVEKGMNKRKGIREDEKQEELEGKKGEGILMAEEEQRQGVEE
EQQEEESVVEIFDDDKGGKEEETEEDGEEEEEEGEGFEVRLEEEGEEEEE
EEEEDDEEEVGGDEQVEEKSVVQIMDDDDAGEEEGEGSEGEEEEEEEEEG
FEVGLGEEEEEEEPEDEGMEEGKWLESTSSDAACAGLEEEGEDKDGVGEG
EAVGVLINGDNALVSASAVVAAALKIRQEQLQKEHQDENVKEGEEERQWP
ALVMSQQHEQQRLQLLLQEKGNDEEERQWPASIMIQQQQEGEGDELENGE
DDLDIEEEEEDEDDNEDEDEDEDEDEDEEEQLGQFFWGPPASLSGRGKGR
RREGGRVRSRKGEALPEGVRTSLPPLGSDEEEEEEESSDDDDEEEEEEEE
EKEEKE*
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Synonyms
Publications