NO06G02970, NO06G02970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02970 vs. NCBI_GenBank
Match: XP_005853752.1 (hypothetical protein NGA_0453300 [Nannochloropsis gaditana CCMP526] >EKU22612.1 hypothetical protein NGA_0453300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 369.8 bits (948), Expect = 1.000e-98 Identity = 185/246 (75.20%), Postives = 211/246 (85.77%), Query Frame = 0 Query: 126 QLAKHEVAAKQADLPWLIVAASIVERLPIIMKEPEAWEAAYMEMQEEIARHGKAFPKELDVMGQANEMDRPDAEILPELPFKLAPRVTKADRLNDRTTLNRALSERLFLLVKGPITGDRWDLPMAVLGKGGKDGRD---SMRRTHEATVGRFLGEKFEAYMPSNAPVGMHWRVPAATAGASSVGAGGNVYGEKVFFYRAQHLKGRGRVVEEGVEEFVWVTREEVGEYLPQETGEEKEYAQLVMNVL 369 QL++HE AAK+A+LPW IVAASIVER PIIMKEPE WEAAYMEMQEEIA+HGK FP EL++MGQA E+DR D E+LPELPFKLAPRVTKADRLNDRTTLNRAL+ERLFLL++GP+T RWDLPMAVL GGK G SMR+THEATV RFLG+KFEAY+PSNAPVGMHWRVP+ + + G YG+KVFFYRAQHLKGRG+VV EGVEEFVWVTREE+GEYLPQ + EEKEYA+L+ N+L Sbjct: 109 QLSRHEAAAKEANLPWRIVAASIVERHPIIMKEPEDWEAAYMEMQEEIAKHGKVFPPELNLMGQAAELDRSDDEVLPELPFKLAPRVTKADRLNDRTTLNRALAERLFLLIRGPVTRGRWDLPMAVLEGGGKGGDMKGLSMRKTHEATVRRFLGDKFEAYVPSNAPVGMHWRVPSEPSTGKT--GGEQTYGDKVFFYRAQHLKGRGKVVGEGVEEFVWVTREEMGEYLPQASVEEKEYAELLTNIL 352
BLAST of NO06G02970 vs. NCBI_GenBank
Match: EWM26303.1 (mitochondrial ribosomal protein l46 [Nannochloropsis gaditana]) HSP 1 Score: 369.8 bits (948), Expect = 1.000e-98 Identity = 185/246 (75.20%), Postives = 211/246 (85.77%), Query Frame = 0 Query: 126 QLAKHEVAAKQADLPWLIVAASIVERLPIIMKEPEAWEAAYMEMQEEIARHGKAFPKELDVMGQANEMDRPDAEILPELPFKLAPRVTKADRLNDRTTLNRALSERLFLLVKGPITGDRWDLPMAVLGKGGKDGRD---SMRRTHEATVGRFLGEKFEAYMPSNAPVGMHWRVPAATAGASSVGAGGNVYGEKVFFYRAQHLKGRGRVVEEGVEEFVWVTREEVGEYLPQETGEEKEYAQLVMNVL 369 QL++HE AAK+A+LPW IVAASIVER PIIMKEPE WEAAYMEMQEEIA+HGK FP EL++MGQA E+DR D E+LPELPFKLAPRVTKADRLNDRTTLNRAL+ERLFLL++GP+T RWDLPMAVL GGK G SMR+THEATV RFLG+KFEAY+PSNAPVGMHWRVP+ + + G YG+KVFFYRAQHLKGRG+VV EGVEEFVWVTREE+GEYLPQ + EEKEYA+L+ N+L Sbjct: 109 QLSRHEAAAKEANLPWRIVAASIVERHPIIMKEPEDWEAAYMEMQEEIAKHGKVFPPELNLMGQAAELDRSDDEVLPELPFKLAPRVTKADRLNDRTTLNRALAERLFLLIRGPVTRGRWDLPMAVLEGGGKGGDMKGLSMRKTHEATVRRFLGDKFEAYVPSNAPVGMHWRVPSEPSTGKT--GGEQTYGDKVFFYRAQHLKGRGKVVGEGVEEFVWVTREEMGEYLPQASVEEKEYAELLTNIL 352
BLAST of NO06G02970 vs. NCBI_GenBank
Match: CBJ28077.1 (mitochondrial ribosomal protein L46 isoform 2 [Ectocarpus siliculosus]) HSP 1 Score: 124.8 bits (312), Expect = 5.600e-25 Identity = 81/232 (34.91%), Postives = 118/232 (50.86%), Query Frame = 0 Query: 134 AKQADLPWLIVAASIVERLPIIMKEPEAWEAAYMEMQEEIARHGKAFPKELDVMGQANEMDRPDAEILPELPFKLAPRVTKADRLNDRTTLNRALSERLFLLVKGPITGDRWDLPMAVLGKGGKDGRDSMRRTHEATVGRFL----------GEKFEAYMPSNAPVGMHWRVPAATAGASSVGAGGNVYGEKVFFYRAQHLKGRGRVVEEGVEEFVWVTREEVGEYLPQETG 356 A L W I +A I+ERLP+I++E W+ + ++Q + A +G FP E+ +E ++L + P LAPR T AD NDRTTL+RAL ERL L+VK P +GD W LP + G +++R+T E T + L + + + N P G WR G +G+KVF R Q + G+ VV+ E +WVT+ E+GEYL + G Sbjct: 82 ATSLGLDWGIRSALILERLPVIVEEYTDWQRDFWDLQTKQAHYGAKFPAEMG-FKYDDEKSLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLVLIVK-PRSGDEWRLPESAWEPG-----ETIRQTAERTAQQLLLKSATRKGQRDDVAQLHFVGNCPAGWFWRTADEEQGGQH-----EKFGDKVFINRVQLICGQPTVVKRQAAEHLWVTKHEIGEYLGESMG 301
BLAST of NO06G02970 vs. NCBI_GenBank
Match: EJK48412.1 (hypothetical protein THAOC_32790 [Thalassiosira oceanica]) HSP 1 Score: 118.6 bits (296), Expect = 4.000e-23 Identity = 79/235 (33.62%), Postives = 126/235 (53.62%), Query Frame = 0 Query: 134 AKQADLPWLIVAASIVERLPIIMKEPEAWEAAYMEMQEEIARHGKAFPKELDVMGQANEMD----RPDAEILPELPFKLAPRVTKADRLNDRTTLNRALSERLFLLVK----GPITGDRWDLPMAVLGKGGKDGRDSMRRTHEATVGRFLGEKFEAYMPSNAPVGMHWRVPAATAGASSVGAGGNVYGEKVFFYRAQHLKGRGRVVEEGV--EEFVWVTREEVGEYLPQETGEEK 359 AKQ PW I A +VER ++M + E +E +M+++ + +GK +P E M + ++ + D ++L LPF APR T+AD + TL+R L ++FL VK G G RW LP A+ +++ +T E V +GE + ++PSNAP+ +++RV GN +GEK+FFYR Q+ G V EE + +++ W+TREEV + + E G + Sbjct: 132 AKQEGKPWRIRVAVMVERPNVVMPDYEDYELEWMDLKNYLMSYGKQYPDETKFMFEPDKPEDHIIESDEDMLAGLPFVPAPRETEADASGNVKTLDRQLKTKVFLAVKSGAEGNRNGPRWTLPSAI-----PQEDETLLQTAERAVSEAVGEDLQLWLPSNAPMTINYRVYNKNMAED---FRGNYFGEKIFFYRLQY--DSGDVDEEAMTADDYGWLTREEVVDRITDERGRHQ 356
BLAST of NO06G02970 vs. NCBI_GenBank
Match: XP_002291686.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90537.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 113.2 bits (282), Expect = 1.700e-21 Identity = 75/247 (30.36%), Postives = 128/247 (51.82%), Query Frame = 0 Query: 124 EEQLAKHEVAAKQA---DLPWLIVAASIVERLPIIMKEPEAWEAAYMEMQEEIARHGKAFPKELDVMGQANEMD----RPDAEILPELPFKLAPRVTKADRLNDRTTLNRALSERLFLLVK----GPITG-DRWDLPMAVLGKGGKDGRDSMRRTHEATVGRFLGEKFEAYMPSNAPVGMHWRVPAATAGASSVGAGGNVYGEKVFFYRAQHLKG---RGRVVEEGVEEFVWVTREEVGEYLPQETG 356 + +L H+ +QA + PW + A +VERLP++ + WE YME+++ + GK +P+E M ++ + E+L LPF APR T+AD + TL+R L ER+FL +K +G RW LP ++ +++ + V +GE + + PSN P+ +++RV + + +S N YGEK+F++R Q G + + G +E+ W+TR+E+ E + E G Sbjct: 115 DNELLYHDTLVRQAKKQNQPWRVRVAVMVERLPVVTPDHPVWEMDYMELKDYLMTFGKEYPEETGFMMRSGREEDHVVETREEMLAGLPFTPAPRETEADHTGNIRTLDRQLKERVFLTLKTASERTASGIPRWTLPSTLV-----SNEETLLDAAKRAVADSVGEDLKLWCPSNTPMAVNYRVYNSKSLSSDFCE--NYYGEKIFYFRVQWDSGDVSESALEKNGEKEYGWLTRKEIVEKVEGERG 354
BLAST of NO06G02970 vs. NCBI_GenBank
Match: XP_008612544.1 (hypothetical protein SDRG_08434 [Saprolegnia diclina VS20] >EQC34232.1 hypothetical protein SDRG_08434 [Saprolegnia diclina VS20]) HSP 1 Score: 97.4 bits (241), Expect = 9.600e-17 Identity = 71/228 (31.14%), Postives = 114/228 (50.00%), Query Frame = 0 Query: 143 IVAASIVERLPIIMKEPEAWEAAYMEMQEEI-ARHGKAFPKELDVMGQAN-EMDRPDAEILPEL--------PFKLAPRVTKADRLNDRTTLNRALSERLFLLVKGPITGDRWDLPMAVLGKGGKDGRDSMRRTHEATVGRFLGEKFEAYMPSNAPVG----MHWRVPAATAGASSVGAGGNVYGEKVFFYRAQHLKGRGRVVEEGVEEFVWVTREEVGEYLPQETGE 357 +V A ++ERLP+I+ + E WE YM M+ +I + + PK+ + E++ +A L E F++A R T+ D N+R +LNRAL +R+FL+V+ +G +W P KD ++M+ + +G EAY NAP+G MH P G V+G KVFFY++Q G + E +++WVT+ E+ EYL + + Sbjct: 58 LVCAPVLERLPVILPDLEQWEEDYMRMKHKIELKTAQRLPKDFWFAEPGSVEVEPEEAPFLEEWNEDELIGDGFQIAKRETEDDAANNRHSLNRALKQRVFLIVQDKTSG-KWFFPTT-----EKDDAETMKDAAFRELSTVVGASLEAYPVGNAPMGYLKVMHEDDPT---------FDGKVHGTKVFFYKSQLAGGDVELNTEKAGDYLWVTQAELAEYLDADVAD 270
BLAST of NO06G02970 vs. NCBI_GenBank
Match: XP_012196018.1 (hypothetical protein SPRG_02071 [Saprolegnia parasitica CBS 223.65] >KDO33262.1 hypothetical protein SPRG_02071 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 97.4 bits (241), Expect = 9.600e-17 Identity = 71/228 (31.14%), Postives = 113/228 (49.56%), Query Frame = 0 Query: 143 IVAASIVERLPIIMKEPEAWEAAYMEMQEEI-ARHGKAFPKELDVMGQAN-EMDRPDAEILPEL--------PFKLAPRVTKADRLNDRTTLNRALSERLFLLVKGPITGDRWDLPMAVLGKGGKDGRDSMRRTHEATVGRFLGEKFEAYMPSNAPVG----MHWRVPAATAGASSVGAGGNVYGEKVFFYRAQHLKGRGRVVEEGVEEFVWVTREEVGEYLPQETGE 357 +V A ++ERLP+I+ + E WE YM M+ +I + + PK+ E++ +A L E F++A R T+ D N+R +LNRAL +R+FL+V+ +G +W P KD ++M+ + +G EAY NAP+G MH P G V+G KVFFY++Q G + E +++WVT+ E+ EYL + + Sbjct: 58 LVCAPVLERLPVILPDLEQWEEDYMRMKHKIELKTAQRLPKDFWFAEPGTVEVEPEEAPFLEEWNEDELIGDGFQIAKRETEDDAANNRHSLNRALKQRVFLIVQDKTSG-KWFFPTT-----EKDDAETMKDAAFRELSAVVGASLEAYPVGNAPMGYLKVMHEDEPT---------FDGKVHGTKVFFYKSQLAGGDVELNTEKAGDYLWVTQAELAEYLDADVAD 270
BLAST of NO06G02970 vs. NCBI_GenBank
Match: XP_002997781.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY67919.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 96.3 bits (238), Expect = 2.100e-16 Identity = 77/229 (33.62%), Postives = 112/229 (48.91%), Query Frame = 0 Query: 141 WLIVAASIVERLPIIMKEPEAWEAAYMEMQEEIA-RHGKAFPKELDVMGQA------NEMDRPDAEILPE----LPFKLAPRVTKADRLNDRTTLNRALSERLFLLVKGPITGDR--WDLPMAVLGKGGKDGRDSMRRTHEATVGRFLGEKFEAYMPSNAPVGMHWRVPAATAGASSVGAGGNVYGEKVFFYRAQHLKGRGRVVEEGVEEFVWVTREEVGEYLPQETGE 357 W +++A ++ERLPII + + WE + MQ E A R + ++ M E P+AE PE F LAPR T+ D ++R +LNRAL R+FLLVK + W P+ G K G + MR V +G++ EA S AP+G V S G KVFFY++QHL G + ++ +++WVTR+E+ EYL E + Sbjct: 76 WRVLSAGVLERLPIIQPDLKDWEVDFEIMQHEKALREDQRLEEDFWFMEPGTKHITPEEAPWPNAEEDPEEIVGAGFHLAPRETEDDANDNRKSLNRALKGRVFLLVKNDQKDAKYPWFFPV-----GEKQGAEKMRDAALRHVSETVGDEVEANPVSFAPIGY---VQYLHENDSEFD------GTKVFFYKSQHLDGDVALNQDRASDYLWVTRDELSEYLEPEIAD 290
BLAST of NO06G02970 vs. NCBI_GenBank
Match: XP_008861388.1 (hypothetical protein H310_00391 [Aphanomyces invadans] >ETW09977.1 hypothetical protein H310_00391 [Aphanomyces invadans]) HSP 1 Score: 95.5 bits (236), Expect = 3.600e-16 Identity = 73/226 (32.30%), Postives = 114/226 (50.44%), Query Frame = 0 Query: 143 IVAASIVERLPIIMKEPEAWEAAYMEMQEEI-ARHGKAFPKELDVMGQ-ANEMDRPDAEILPEL--------PFKLAPRVTKADRLNDRTTLNRALSERLFLLVKGPITGDRWDLPMAVLGKGGKDGRDSMRRTHEATVGRFLGEKFEAYMPSNAPVGMHWRVPAATAGASSVGAGGNVYGEKVFFYRAQHLKGRG--RVVEEGVEEFVWVTREEVGEYLPQETGE 357 IV ASI+ERLP+I+ + E WE AY M+ +I + PK+ A +++ DA L E F+LA R T+ D N+R +LNRAL +R+FL+V+ P++ +W LP K ++MR + +G++ EAY NAP+G + + G V+G K+FF +AQ G + + +++WVT+ E+ EYL E Sbjct: 62 IVFASILERLPLILPDMEPWEEAYYRMKHKIEIKEAMRLPKDFWFKEPGAVDVEPEDAPFLSEWNEDELVGDGFQLAKRETEDDATNNRHSLNRALKQRVFLIVQDPVS-LKWTLPTT-----EKAADETMRDAAFRELADTIGDQVEAYPVGNAPMG-----HLVVSHENEPDFDGKVHGTKMFFLKAQTFGNEGVVNLNKAKAADYLWVTQAELAEYLEPHVAE 276
BLAST of NO06G02970 vs. NCBI_GenBank
Match: XP_024391997.1 (39S ribosomal protein L46, mitochondrial-like [Physcomitrella patens] >PNR42348.1 hypothetical protein PHYPA_017177 [Physcomitrella patens]) HSP 1 Score: 95.1 bits (235), Expect = 4.800e-16 Identity = 68/218 (31.19%), Postives = 113/218 (51.83%), Query Frame = 0 Query: 143 IVAASIVERLPIIMKEP----EAWEAAYMEMQEEIARHGKAFPKELDVMGQANEMDRPDAEILPELPFKLAPRVTKADRLNDRTTLNRALSERLFLLVKG-PITGDR----WDLPMAVLGKGGKDGRDSMRRTHEATVGRFLGEKFEAYMPSNAPVG-MHWRVPAATAGASSVGAGGNVYGEKVFFYRAQHLKGRGRVVEEGVEEFVWVTREEVGEYL 351 I+AA +VERLP+++ + + +E+ + +++ R +P+E + E D +A+ F+ AP VT+ADR NDR +LNRALS RL+LL++G P G + W P V DS+R E V F+ + Y+ NAP G + +R+ + K FF+++Q + G+ V + +++F WV++EE+ EYL Sbjct: 78 IIAAMVVERLPVVLPKSAPPVDTFESFSFDWRQQFRRE---YPQEFLDASSSREADEGEAD------FEPAPTVTEADRTNDRRSLNRALSRRLYLLIRGIPYGGVKDSFVWHFPEKVYA-----NEDSLRMCAEEAVKPFVSNPTDLYLVGNAPCGHLTYRLSEPS--------------YKRFFFKSQLIAGKVHVKGKKIKDFAWVSKEELPEYL 267 The following BLAST results are available for this feature:
BLAST of NO06G02970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02970 ID=NO06G02970|Name=NO06G02970|organism=Nannochloropsis oceanica|type=gene|length=1782bpback to top protein sequence of NO06G02970.1 >NO06G02970.1-protein ID=NO06G02970.1-protein|Name=NO06G02970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=369bpback to top Synonyms
Publications
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