NO06G02960, NO06G02960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_005853750.1 (phosphopantothenoylcysteine decarboxylase [Nannochloropsis gaditana CCMP526] >EKU22610.1 phosphopantothenoylcysteine decarboxylase [Nannochloropsis gaditana CCMP526] >EWM26313.1 phosphopantothenoylcysteine decarboxylase [Nannochloropsis gaditana]) HSP 1 Score: 293.5 bits (750), Expect = 5.600e-76 Identity = 140/200 (70.00%), Postives = 168/200 (84.00%), Query Frame = 0 Query: 26 QRRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVR-RPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKKYLGRY 225 QRRP VLLAATGSVAT+K+PE+A+RL+ A+VKV LT +A+HFW+ AK YNPAAW F+ L + VLEDK+EW+ W AMGD VLHIQ+RDWADL+LIAPLSANTLGKLA+GLCDNL+TS+VRAWD++ +PV++APAMNTHMW HPFTA+QL MLQ DL Y V+PPVSKLLACGD GQGGLA ++DLV AV+ L Y Sbjct: 9 QRRPRVLLAATGSVATVKIPELALRLSLGAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWTAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWDLKQKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIDDLVRAVQDQLQAY 208
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_012197644.1 (hypothetical protein SPRG_03684 [Saprolegnia parasitica CBS 223.65] >KDO31764.1 hypothetical protein SPRG_03684 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 231.9 bits (590), Expect = 2.000e-57 Identity = 110/193 (56.99%), Postives = 145/193 (75.13%), Query Frame = 0 Query: 27 RRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKK 220 RRP VL+AA+GSVATIKVPE+ V+L + A+V+VVLT SA F +A YNP + FEAL + + D+DEW W+ +GD +LHIQ+RDWAD+ ++APLSAN++ KLANGLCDNLLT V RAW +P++VAPAMNT MW HP T + + +LQ D GY V+PPVSK+LACG+ G G LA ++D+VA V++ Sbjct: 5 RRPRVLVAASGSVATIKVPELVVKLAE--YAEVQVVLTKSANFFLPKAAAYNPTMFAAFEAL--NVTIHRDEDEWNAWNVIGDPILHIQLRDWADVCVVAPLSANSMAKLANGLCDNLLTCVARAWSQSKPLLVAPAMNTQMWAHPCTGKHVTILQDDFGYRVIPPVSKMLACGETGNGALAAIDDIVAHVRR 193
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_008611307.1 (phosphopantothenoylcysteine decarboxylase [Saprolegnia diclina VS20] >EQC35023.1 phosphopantothenoylcysteine decarboxylase [Saprolegnia diclina VS20]) HSP 1 Score: 231.1 bits (588), Expect = 3.400e-57 Identity = 110/192 (57.29%), Postives = 146/192 (76.04%), Query Frame = 0 Query: 28 RPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKK 220 RP VL+AA+GSVATIKVPE+ V+L + A+V+VVLT SA F +A YNP + FEAL + + D+DEW W+ +GD +LHIQ+RDWAD+ ++APLSAN++ KLANGLCDNLL+ VVRAW +P++VAPAMNT MWTHP TA+ + +LQ D GY V+PPVSK+LACG+ G G LA ++D+V V++ Sbjct: 14 RPRVLVAASGSVATIKVPELVVKLAE--YAEVQVVLTKSADFFLPKAAAYNPTMFAAFEAL--GVTIHRDEDEWNAWNVIGDPILHIQLRDWADVCVVAPLSANSMAKLANGLCDNLLSCVVRAWSQSKPLLVAPAMNTQMWTHPCTAKHVQILQDDFGYRVIPPVSKMLACGETGNGALAAIDDIVTHVRR 201
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_008909459.1 (hypothetical protein PPTG_14712 [Phytophthora parasitica INRA-310] >ETI40641.1 hypothetical protein F443_14008 [Phytophthora parasitica P1569] >ETK80740.1 hypothetical protein L915_13652 [Phytophthora parasitica] >ETL34155.1 hypothetical protein L916_13551 [Phytophthora parasitica] >ETL87441.1 hypothetical protein L917_13358 [Phytophthora parasitica] >ETM40671.1 hypothetical protein L914_13446 [Phytophthora parasitica] >ETN04989.1 hypothetical protein PPTG_14712 [Phytophthora parasitica INRA-310] >ETO69328.1 hypothetical protein F444_14040 [Phytophthora parasitica P1976] >ETP10398.1 hypothetical protein F441_13936 [Phytophthora parasitica CJ01A1] >ETP38572.1 hypothetical protein F442_13849 [Phytophthora parasitica P10297] >KUF86388.1 Phosphopantothenoylcysteine decarboxylase [Phytophthora nicotianae] >KUF90367.1 Phosphopantothenoylcysteine decarboxylase [Phytophthora nicotianae]) HSP 1 Score: 225.3 bits (573), Expect = 1.900e-55 Identity = 115/195 (58.97%), Postives = 144/195 (73.85%), Query Frame = 0 Query: 28 RPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEAL-------QDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVA 216 RP VLL A+GSVAT+KVPEIAVRL++ +A+V VVLT SA F RAK YN AAW EF A + I+V+ D+DEWE W+ +GD V HI+++DWAD+ML+AP+SANTL KLANGL DNLLT V RAW + +P + APAMNT MW HP TA+Q+ +L + GY +VPP+ K LACG G GGLATV+ +VA Sbjct: 2 RPCVLLCASGSVATVKVPEIAVRLSE--TAEVCVVLTKSADFFLQRAKDYNEAAWEEFHAATQLSGGGKGRIVVVRDEDEWEGWNVVGDSVRHIELKDWADVMLLAPMSANTLAKLANGLADNLLTCVARAWIMTKPFIYAPAMNTDMWNHPITAQQIRVLD-EFGYKMVPPIEKKLACGVVGNGGLATVDSIVA 193
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_002906567.1 (phosphopantothenoylcysteine decarboxylase, putative [Phytophthora infestans T30-4] >EEY65968.1 phosphopantothenoylcysteine decarboxylase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 222.2 bits (565), Expect = 1.600e-54 Identity = 112/194 (57.73%), Postives = 142/194 (73.20%), Query Frame = 0 Query: 28 RPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEAL-------QDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLV 215 RP VLL A+GSVAT+KVPEIAVRL++ +A+V VVLT +A F RAK YNP AW +F A Q I+V+ D+DEW W+ +GD V HI+++DWAD+ML+ P+SANTL KLANGL DNLLT V RAW +P + APAMNT MW HP TA+QL +L+ + GY ++PPV K LACG G+GGLATV+ +V Sbjct: 2 RPRVLLCASGSVATVKVPEIAVRLSE--TAEVCVVLTKAADFFLQRAKNYNPLAWEKFCAATQLPGDDQGRIVVVRDEDEWAAWNVVGDSVRHIELKDWADVMLLVPMSANTLAKLANGLADNLLTCVARAWITSKPFIFAPAMNTDMWNHPITAKQLRVLE-EFGYKMIPPVEKKLACGVVGKGGLATVDSIV 192
BLAST of NO06G02960 vs. NCBI_GenBank
Match: OQS02927.1 (phosphopantothenoylcysteine decarboxylase [Thraustotheca clavata]) HSP 1 Score: 222.2 bits (565), Expect = 1.600e-54 Identity = 104/205 (50.73%), Postives = 150/205 (73.17%), Query Frame = 0 Query: 17 NFFPPDIPGQRRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKKYL 222 NF P ++ RRP VL+ A+GSVAT+KVPEI + L+K A V++VLT SA F ++A+KYNP + F+ L +I + D +EW+ W+A+GD +LHIQ+R+WA++ ++APLSANT+ KL NG+CDNLLT V RAW +P+++APAMNT MW HP T +QL +L+ D GY ++PP+SK+LACG+ G G LA V+ + V+ ++ Sbjct: 2 NFVPMNM--SRRPRVLVGASGSVATVKVPEIVLELSK--YADVQIVLTKSANFFLEKAEKYNPEVYAAFQTLGVKIYL--DDNEWDTWNAIGDDILHIQLREWAEVFVVAPLSANTMAKLTNGICDNLLTCVARAWASSKPLLIAPAMNTQMWNHPCTKKQLQILENDYGYEIIPPMSKMLACGETGNGALAAVKTICTLVQNHI 200
BLAST of NO06G02960 vs. NCBI_GenBank
Match: CCA25083.1 (phosphopantothenoylcysteine decarboxylase putative [Albugo laibachii Nc14]) HSP 1 Score: 216.5 bits (550), Expect = 8.600e-53 Identity = 110/205 (53.66%), Postives = 149/205 (72.68%), Query Frame = 0 Query: 27 RRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAW------TEF--EALQDE--IMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKKYL 222 RRP +LLAA+GSVAT+K+PEI VRL A V VVLT S + F+ RAK YNP+ W T+F + L D+ + + +D++EWE W+ +GD VLHI+++DWADL+L+APLSANTL K+A+G+ DNLLT + RAW V +P ++APAMNT MW HPFT+RQL +L +L ++ PV K LACG G GGLA ++L++A KK+L Sbjct: 178 RRPRILLAASGSVATVKIPEIIVRLHG--FADVTVVLTQSTKFFFHRAKNYNPSIWMQLLELTKFSTDVLTDKPAVTIHQDENEWESWNEVGDPVLHIELKDWADLILLAPLSANTLAKVAHGMADNLLTCITRAWPVTKPFLIAPAMNTDMWDHPFTSRQLRVLTEELHCVLISPVRKKLACGVFGNGGLAAADELISATKKHL 380
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_024572821.1 (phosphopantothenoylcysteine decarboxylase [Plasmopara halstedii] >CEG36452.1 phosphopantothenoylcysteine decarboxylase [Plasmopara halstedii]) HSP 1 Score: 215.3 bits (547), Expect = 1.900e-52 Identity = 116/212 (54.72%), Postives = 146/212 (68.87%), Query Frame = 0 Query: 19 FPPDIPGQRRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEF-------EALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKKYLGR 224 FP + RRP VLL A+GSVA +K+PEIA RLT A+V VVLT SA F RAK Y+ AA T+F + Q +I ++ D+DEW+ W+ +GD V HI+++DWAD+ML+APLSANTLGKLANGL DNLLT + RAW + + APAMNT MW HP TA QL +L +LGY ++PPV K LACG G+GGLATV+ +VA L R Sbjct: 16 FPLTMSTVRRPRVLLCASGSVAAVKIPEIANRLTG--MAEVCVVLTKSADFFLKRAKDYDAAAHTQFCTAIHLPDGDQGKITIVRDEDEWKTWNVVGDSVRHIELKDWADVMLLAPLSANTLGKLANGLADNLLTCIARAWIPSKLFIFAPAMNTDMWNHPITATQLRVLD-ELGYKMIPPVEKKLACGIFGKGGLATVDTIVAYTLDQLRR 224
BLAST of NO06G02960 vs. NCBI_GenBank
Match: CCI39624.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 213.0 bits (541), Expect = 9.500e-52 Identity = 112/227 (49.34%), Postives = 149/227 (65.64%), Query Frame = 0 Query: 23 IPGQRRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAW------TEFEA--LQDE--IMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACG------------------DAGQGGLATVEDLVAAVKKYL 222 + RRP +LL A+GSVAT+K+PEI VRL A V +VLT SA+ F+ RAK YNP++W T+F A L D+ I + +D+DEWE W +G VLHIQ++DWADL+L+APLSANTL K+A+GL DNLLT + RAW +P V+APAMNT MW HPFT++ L +L +L Y ++PPV K LACG G GGLATV++++ K++L Sbjct: 174 VTASRRPRILLGASGSVATVKIPEIVVRLYG--FADVTIVLTKSAKFFFQRAKNYNPSSWMHLLELTKFSADLLTDKPAITIYQDQDEWESWTEVGHPVLHIQLKDWADLILLAPLSANTLAKVAHGLADNLLTCITRAWPATKPSVIAPAMNTDMWDHPFTSQHLRVLTEELHYVLIPPVRKKLACGVVGKCMNLRNVVDPSIFVSVGNGGLATVDEIITVTKQHL 398
BLAST of NO06G02960 vs. NCBI_GenBank
Match: XP_009040418.1 (hypothetical protein AURANDRAFT_54984 [Aureococcus anophagefferens] >EGB04861.1 hypothetical protein AURANDRAFT_54984 [Aureococcus anophagefferens]) HSP 1 Score: 211.5 bits (537), Expect = 2.800e-51 Identity = 111/196 (56.63%), Postives = 138/196 (70.41%), Query Frame = 0 Query: 27 RRPHVLLAATGSVATIKVPEIAVRLTKDISAKVKVVLTTSAQHFWDRAKKYNPAAWTEFEALQDEIMVLEDKDEWEEWDAMGDGVLHIQVRDWADLMLIAPLSANTLGKLANGLCDNLLTSVVRAWDVRRPVVVAPAMNTHMWTHPFTARQLGMLQADLGYHVVPPVSKLLACGDAGQGGLATVEDLVAAVKKYLG 223 RRP VLL ATGSVAT+KVP++A+ L++ A V+VV+T A+ F +A+ Y+ AAW F+A I VL D DEW+ W +GD V+H+++R WADL++IAPLSAN+L KLANGLCD+LL+ RAWD +P VVAPAMNT MWTHP TA L L+ LG VPP SK LACGD G G LA V +VAA LG Sbjct: 207 RRPRVLLGATGSVATVKVPKLALALSE--VADVRVVVTEKAKTFLAKAEAYDAAAWATFQA--SGIEVLSDADEWDAWQEIGDDVVHVELRKWADLLVIAPLSANSLAKLANGLCDDLLSCTARAWDFDKPFVVAPAMNTAMWTHPLTATHLADLRV-LGVAAVPPASKKLACGDVGPGALADVPAIVAAAGAALG 397 The following BLAST results are available for this feature:
BLAST of NO06G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02960 ID=NO06G02960|Name=NO06G02960|organism=Nannochloropsis oceanica|type=gene|length=675bpback to top protein sequence of NO06G02960.1 >NO06G02960.1-protein ID=NO06G02960.1-protein|Name=NO06G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=225bpback to top Synonyms
Publications
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