NO06G02950, NO06G02950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02950 vs. NCBI_GenBank
Match: EWM26306.1 (nad-dependent epimerase dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 401.4 bits (1030), Expect = 2.600e-108 Identity = 204/281 (72.60%), Postives = 233/281 (82.92%), Query Frame = 0 Query: 25 PASTQQTYARQRSPSTLT-MAAALKTGDRVVVIGSTGGCGQLIAARLANAGKYKVRAIGRSQTKLQDVLGSNS-GIDLDVADSTNLDSLLAPLSDADCVIIATGTSAFPSPRWKNGNTPDAVDRKGVQNILQALTSKPRKRPVKKVIFLSSIGVLRAKSLPYSILNLFGVLDAKRDSEEFLKSMATTEDFDYVIVRPGRLVGGPWTNTDVSALLKVEEGTRKRVVVEKGDALVGDAARISVAELVARALDRPEAVGKELCLVNEEGSPFSEGDWERLFEGL 304 P +YA ++S S T MA LK DRV VIGSTGGCGQLI ARL + G+Y+V+A+GRS+ KL++VLG S ++ ADS ++DSL PLSD DCVIIATGTSAFPSPRW+ GNTPDAVDRKGVQNIL+A+TSKPRKR VKKV+FLSS+GVLR K LPYSILN FGVLDAKRDSE+ L+ MA TE FD +IVRPGRLVGGPWTNTDVSALLKVEEG RKRVVVE+GD+LVGDAAR+SVAELV RAL RPEA+G+ LC+VNEEG PFSEG W LFEGL Sbjct: 38 PRHASASYAGRKSTSPFTMMAVELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILIVRPGRLVGGPWTNTDVSALLKVEEGARKRVVVEQGDSLVGDAARVSVAELVVRALGRPEAMGRALCVVNEEGPPFSEGQWTALFEGL 318
BLAST of NO06G02950 vs. NCBI_GenBank
Match: XP_005853751.1 (nad-dependent epimerase dehydratase, partial [Nannochloropsis gaditana CCMP526] >EKU22611.1 nad-dependent epimerase dehydratase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 247.7 bits (631), Expect = 4.800e-62 Identity = 125/175 (71.43%), Postives = 145/175 (82.86%), Query Frame = 0 Query: 43 MAAALKTGDRVVVIGSTGGCGQLIAARLANAGKYKVRAIGRSQTKLQDVLGSNS-GIDLDVADSTNLDSLLAPLSDADCVIIATGTSAFPSPRWKNGNTPDAVDRKGVQNILQALTSKPRKRPVKKVIFLSSIGVLRAKSLPYSILNLFGVLDAKRDSEEFLKSMATTEDFDYVI 217 MA LK DRV VIGSTGGCGQLI ARL + G+Y+V+A+GRS+ KL++VLG S ++ ADS ++DSL PLSD DCVIIATGTSAFPSPRW+ GNTPDAVDRKGVQNIL+A+TSKPRKR VKKV+FLSS+GVLR K LPYSILN FGVLDAKRDSE+ L+ MA TE FD +I Sbjct: 2 MAVELKVNDRVCVIGSTGGCGQLITARLVDEGRYQVKAVGRSEAKLREVLGGESPKLEFAEADSRDIDSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRTVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMAATEGFDILI 176
BLAST of NO06G02950 vs. NCBI_GenBank
Match: CEL99835.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 216.9 bits (551), Expect = 9.000e-53 Identity = 115/259 (44.40%), Postives = 167/259 (64.48%), Query Frame = 0 Query: 45 AALKTGDRVVVIGSTGGCGQLIAARLANAGKYKVRAIGRSQTKLQDVLG-----SNSGIDLDVADSTNLDSLLAPLSDADCVIIATGTSAFPSPRWKNGNTPDAVDRKGVQNILQALTSKPRKRPVKKVIFLSSIGVLRAKSLPYSILNLFGVLDAKRDSEEFLKSMATTEDFDYVIVRPGRLVGGPWTNTDVSALLKVEEGTRKRVVVEKGDALVGDAARISVAELVARALDRP--EAVGKELCLVNEEGSPFSEGDW 297 AAL GD +VV G+TGG GQL+ RLA G++KVRA+ RS + G + G+++ D + SL + L+DA V++ TGT+AFP+ +WK GNTP A+D +G + +++ L ++ +KK +SIGV R LP+SILNLFGVLDAK+ EE + S + +DYVIVRPGRL+GGP+TN DV+ LLK+E G ++RV + GD + GD R+SVAE + +AL P + V + ++N +G P ++ DW Sbjct: 2 AALSDGDTIVVAGATGGVGQLVTQRLAQLGRFKVRALSRSPERASGPGGPLEALAAQGVEVARGDVRDPSSLPSALADASAVVVCTGTTAFPTGKWKGGNTPKAIDEEGTRAVVEQLR---KQGGLKKFALPTSIGVRRPGQLPFSILNLFGVLDAKKSGEEAVMSASKECGYDYVIVRPGRLIGGPYTNPDVATLLKIEGGDKQRVEIAPGDQMAGDCLRVSVAEAIVQALLCPALDGVSIDFSIINSKGDPPTDADW 257
BLAST of NO06G02950 vs. NCBI_GenBank
Match: XP_002184095.1 (nucleoside-diphosphate-sugar epimerases-like protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44273.1 nucleoside-diphosphate-sugar epimerases-like protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 188.3 bits (477), Expect = 3.400e-44 Identity = 119/311 (38.26%), Postives = 177/311 (56.91%), Query Frame = 0 Query: 3 RLLILAGLLSLL-IPVGVLGFFCPASTQQTYARQRSPSTLT-------MAAALKTGDRVVVIGSTGGCGQLIAARLANAGKYKVRAIGRSQTKLQDVLGSNS--GIDLDVADSTNLDSLLAPLSDADCVIIATGTSAFPSPRWKNGNTPDAVDRKGVQNILQALTSKPRKRPVKKVIFLSSIGVLRAKSLPYSILNLFGVLDAKRDSEEFLKSMATTEDFDYVIVRPGRLVGGPWTNTDVSALLKVEEGTRKRVVVEKGDALVGDAARISVAELVARALDRPEAVGKELCLVNEEGSPFSEGDWERLFEGL 304 RL + L+S+L + G L + T Q R SP ++ + AAL++GD V+VIG TGG GQL+ +LA A Y VR R + VL +++ + LD+ +T D L A L V+I+ GT+AFP+ +W+ GNTP A+D++ V NI Q+ + P +KKV+ L+S+GV R +P+ ILNLFGVLDAK+ E+ + A F+Y I+RPGRLVGGP+TN DV+ LL+V+ G V V+ GD+L+GD R + AE V + L E + + + + + W + F + Sbjct: 2 RLSLAVTLISVLGLAAGFLEVAAFSRTTQ-LVRCESPRSVADAVRNTRLCAALQSGDGVLVIGGTGGVGQLVTQKLA-AAAYDVRVASRDPARAAAVLANDNVRVVSLDLLSATPAD-LDAALQGTAAVVISVGTTAFPTMKWRGGNTPQAIDQEAVTNIAQSARTVP---GLKKVVLLTSVGVDRTGEMPFLILNLFGVLDAKKAGEQAVVDAAVHSGFEYAIIRPGRLVGGPYTNPDVAKLLQVQGGAENGVDVQPGDSLLGDCKRDACAEAVVQCLINEECRNVDFSIASNDQPALTNEAWNQAFRSM 306
BLAST of NO06G02950 vs. NCBI_GenBank
Match: CBJ25953.1 (Dihydroflavonol-4-reductase [Ectocarpus siliculosus]) HSP 1 Score: 184.5 bits (467), Expect = 4.900e-43 Identity = 109/280 (38.93%), Postives = 161/280 (57.50%), Query Frame = 0 Query: 33 ARQRSPSTLTMAAALKTGDRVVVIGSTGGCGQLIAARLANAGKYKVRAIGRSQTKLQDVLGSNSG----IDLDVADSTNLDSLLAPLSDADCVIIATGTSAFPSPRWKNGNTPDAVDRKGVQNILQALTSKPRKRPVKKVIFLSSIGVLRAKSLPYSILNLFGVLDAKRDSEEFLKSMATTEDFDYVIVRPGRLVGGP---WTNTDVSALLKV-EEGTRKRVV-VEKGDALVGDAARISVAELVARALDRPEAVGKELCLVNEEGSPFSEGDWERLFEGL 304 A R+ + + GD VVV+G++GG G+L+ LA+ GKYKV+ + R+ K ++ L S++G I+L+ D + SL+A + A CV+ TGT+AFPS RW GNTPDAVD V N+L+A +K+ + LSS+GV RA P+ ILN FGVLDAK E ++ A F Y IVRPG++ G P ++N+ + E+G+ KR+V + +GD+ GD SVAE + + + A+GK ++N G S+G W+ LF L Sbjct: 59 AASRASMSAAAGGEISEGDTVVVVGASGGIGRLVTQSLASTGKYKVKGLVRNLEKAKEALLSSAGGGLEIELEQGDILDESSLVAAMKGAACVVACTGTTAFPSKRWNGGNTPDAVDNLAVGNMLRAAAG---GGSLKRFVLLSSVGVTRADKFPFVILNAFGVLDAKAKGEAAVRKAAKEGGFGYSIVRPGQIKGDPFLAYSNSGAAVSPDAPEKGSAKRMVSLRQGDSEAGDVNPSSVAEAFTQTVGQAGAIGKSYTVINSLGDAPSQGTWDELFAKL 335
BLAST of NO06G02950 vs. NCBI_GenBank
Match: GAX28114.1 (hypothetical protein FisN_6Lh069 [Fistulifera solaris]) HSP 1 Score: 176.0 bits (445), Expect = 1.800e-40 Identity = 101/277 (36.46%), Postives = 159/277 (57.40%), Query Frame = 0 Query: 26 ASTQQTYARQRSPSTLTMAAALKTGDRVVVIGSTGGCGQLIAARLANAGKYKVRAIGRSQTKLQDVLGSNSGIDLDVADSTNLDSLLAPLSDADCVIIATGTSAFPSPRWKNGNTPDAVDRKGVQNILQALTSKPRKRPVKKVIFLSSIGVLRAKSLPYSILNLFGVLDAKRDSEEFLKSMATTEDFDYVIVRPGRLVGGPWTNTDVSALLKVEEGTRKRVVVEKGDALVGDAARISVAELVARALDRPEAVGKELCLV-NEEGSPFSEGDWERLFE 302 +S+ ++ + + L +A+ GD VVV+G +GG GQL++ +LA AG Y VR R+ D + + LD+ ++ L + A ++I+ GT+AFP+ +WK GNTP A+D V + A ++ + +K+++ ++SIGV R +P+ ILNLFGVLDAK+ EE ++ A E+ DY I+RPGRL+GGP+TN DV+ LL+++ G V V GD L+GD R + AE + + L E +V NE + +S W F+ Sbjct: 37 SSSSSSHFPRTNAVPLLFLSAIGEGDTVVVVGGSGGVGQLVSRKLAQAG-YFVRVTSRNNPSTTDTNPNLTSTKLDLVKGSD-QELQQAIQGAAALVISVGTTAFPTLKWKGGNTPQAIDDIAVTRLAYAASA---LQSLKRIVLVTSIGVDRTDQMPFFILNLFGVLDAKKKGEEAVRK-AANENIDYAIIRPGRLIGGPFTNLDVAKLLQLKGGAENGVTVAAGDVLLGDCKRDACAEAIVQCLTNAACSNVEFSIVSNENETAWSVEQWTSAFQ 307
BLAST of NO06G02950 vs. NCBI_GenBank
Match: GAX25893.1 (hypothetical protein FisN_6Hh069 [Fistulifera solaris]) HSP 1 Score: 174.1 bits (440), Expect = 6.700e-40 Identity = 100/258 (38.76%), Postives = 152/258 (58.91%), Query Frame = 0 Query: 45 AALKTGDRVVVIGSTGGCGQLIAARLANAGKYKVRAIGRSQTKLQDVLGSNSGIDLDVADSTNLDSLLAPLSDADCVIIATGTSAFPSPRWKNGNTPDAVDRKGVQNILQALTSKPRKRPVKKVIFLSSIGVLRAKSLPYSILNLFGVLDAKRDSEEFLKSMATTEDFDYVIVRPGRLVGGPWTNTDVSALLKVEEGTRKRVVVEKGDALVGDAARISVAELVARALDRPEAVGKELCLV-NEEGSPFSEGDWERLFE 302 +A+ GD VVV+G +GG GQL++ +LA AG VR R+ ++ S LD+ ++ + L + A ++I+ GT+AFP+ +WK GNTP A+D V + QA + + + +K+++ ++SIGV R +P+ ILNLFGVLDAK+ EE ++ A E DY I+RPGRL+GGP+TN DV+ LL++E G V V +GD L+GD R + AE + + L E +V NE + +S W F+ Sbjct: 2 SAIAPGDTVVVVGGSGGVGQLVSRKLAQAGS-SVRVTSRNPVSNENNPNITSR-KLDLVKGSD-EELQHAIEKASALVISVGTTAFPTLKWKGGNTPQAIDDIAVTRLAQAAS---QSKTLKRIVLVTSIGVDRTDQMPFLILNLFGVLDAKKQGEEAVRK-AANESIDYAILRPGRLIGGPFTNLDVAKLLQIEGGAENGVTVAQGDVLLGDCKRDACAEAIVQCLTNAACSNVEFSIVSNENETAWSVEQWTSAFQ 252
BLAST of NO06G02950 vs. NCBI_GenBank
Match: XP_004984340.1 (sanguinarine reductase [Setaria italica] >KQK90840.1 hypothetical protein SETIT_036054mg [Setaria italica]) HSP 1 Score: 170.2 bits (430), Expect = 9.600e-39 Identity = 109/282 (38.65%), Postives = 159/282 (56.38%), Query Frame = 0 Query: 25 PASTQQTYARQRSPSTLTMAAALKTGDR-VVVIGSTGGCGQLIAARLANAGKYKVRAIGRSQTKLQDVLGSNSGIDLDV--ADSTNLDSLLAPLSD-ADCVIIATGTSAFPSPRWKNGNTPDAVDRKGVQNILQALTSKPRKRPVKKVIFLSSIGVLRAKSLPYSILNLFGVLDAKRDSEEFLKSMATTEDFDYVIVRPGRLVGGPWTNTDVSALLKVEEGTRKRVVVEKGDALVGDAARISVAELVARALDRPEAVGK--ELCLVNEEGSPFSEGDWERLF 301 P + Q+ AR + A A K + V+V+G TGG GQL+ A L + K R + R+ K + + G L V D+ N + L + + VI TGT+AFPS RW NTP+ VD G++N++ AL R +K++IF+SSIGV + +P+SI+NLFGVL K+ +E+F++S + I+RPGRL GP+T+ D++ LLK G R+ VV+ KGD LVG+ +R+ VAE +ALD G+ E+ V EG WE+LF Sbjct: 115 PRAVQEQPARSEASGETGAAVAPKASSKLVLVVGGTGGVGQLVVASLLSR-NIKSRLLLRNPEKAESLFGKQDESVLQVYKGDTRNPNDLDPQMFEGVTHVICCTGTTAFPSKRWDGDNTPERVDWDGIRNLVSAL-----PRTIKRLIFVSSIGVTKYNEIPWSIMNLFGVLKYKKMAEDFVRS----SGIPFTIIRPGRLTDGPYTSYDLNTLLKATAGERRAVVIGKGDKLVGEVSRLVVAEACIQALDIESTEGQIYEINSVKGEGPGTDPVKWEQLF 386
BLAST of NO06G02950 vs. NCBI_GenBank
Match: XP_019449341.1 (PREDICTED: uncharacterized protein At2g37660, chloroplastic [Lupinus angustifolius]) HSP 1 Score: 168.7 bits (426), Expect = 2.800e-38 Identity = 108/255 (42.35%), Postives = 149/255 (58.43%), Query Frame = 0 Query: 53 VVVIGSTGGCGQLIAARLANAGKYKVRAIGRSQTKLQDVLGSNSGIDLDV--ADSTNLDSLLAPLSD-ADCVIIATGTSAFPSPRWKNGNTPDAVDRKGVQNILQALTSKPRKRPVKKVIFLSSIGVLRAKSLPYSILNLFGVLDAKRDSEEFLKSMATTEDFDYVIVRPGRLVGGPWTNTDVSALLKVEEGTRKRVVVEKGDALVGDAARISVAELVARALDR--PEAVGKELCLVNEEGSPFSEGDWERLFEG 303 V+++G++GG GQL+AA L K R I R K + G L V AD+ N D L + + VI TGT+AFPS RW + NTP+ VD GV+N++ AL S VK+V+ +SSIGV ++ LP+SI+NLFGVL K+ E+FL+S F + I+RPGRL GP+T+ D++ LL+ G R+ V++ +GD LVG+A+RI VAE +ALD E E+ V EG W LFEG Sbjct: 88 VLLLGASGGVGQLVAAALLQR-NVKSRLILRDPEKATTLFGKQDVEKLQVYKADTRNQDDLDPSIFEGVTHVICCTGTTAFPSKRWDDNNTPERVDWVGVKNVVSALPS-----TVKRVVLVSSIGVTKSNELPWSIMNLFGVLKYKKMGEDFLRS----SGFPFTIIRPGRLTDGPYTSYDLNTLLRATAGQRRAVLIGQGDKLVGEASRIVVAEACIQALDLEITENQVYEISSVEGEGPGNEVKKWHELFEG 332
BLAST of NO06G02950 vs. NCBI_GenBank
Match: PSC76139.1 (nucleoside diphosphate sugar epimerase [Micractinium conductrix]) HSP 1 Score: 167.9 bits (424), Expect = 4.800e-38 Identity = 100/260 (38.46%), Postives = 147/260 (56.54%), Query Frame = 0 Query: 47 LKTGDRVVVIGSTGGCGQLIAARLANAGKYKVRAIGRSQTKLQDVLGSNSGIDLDVADSTNLDSLLAPLSDADCVIIATGTSAFPSPRWKNGNTPDAVDRKGVQNILQALTSKPRKRPVKKVIFLSSIGVLRAKSLPYSILNLFGVLDAKRDSEEFLKSMATTEDFDYVIVRPGRLVGGPWTNTDVSALLKVEEGTRKRVVVEKGDALVGDAARISVAELVARALDRPEAVGKELCLVNEEG-SPFSE-GDWERLFEGLK 305 ++ G V+V G+TGG GQL+ A+L G YKVRA+ RS K+Q G G+ +AD + SL A L D V TGT+AFPS RW GN P+ D V N+++A +K+ +S GV R+ P++ILNLFGVL KR E+ L+S +V++RPGRL GP+T+ D++ L + G+R+ V + D L G+A+RI+VAE + ++L G+ L ++EG P + W LF G++ Sbjct: 39 VEPGSTVLVAGATGGVGQLLTAKLLERG-YKVRALSRSAEKVQQQFGGAEGLTTAIADLRDPSSLGAALGGVDAVCCCTGTTAFPSKRWDGGNNPEQTDYVSVSNLIKACPPS-----LKRFTLTTSAGVERSGQFPFAILNLFGVLKFKRMGEQVLES----SGLPWVVIRPGRLTDGPYTSFDLNTLFQATSGSRQDVQLSLADDLSGEASRIAVAEAIVQSLLLDFVEGRHYALSSKEGDGPGKDPAKWRTLFAGVR 288 The following BLAST results are available for this feature:
BLAST of NO06G02950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02950 ID=NO06G02950|Name=NO06G02950|organism=Nannochloropsis oceanica|type=gene|length=1040bpback to top protein sequence of NO06G02950.1 >NO06G02950.1-protein ID=NO06G02950.1-protein|Name=NO06G02950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bpback to top Synonyms
Publications
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