NO06G02850, NO06G02850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02850 vs. NCBI_GenBank
Match: EWM26298.1 (replication factor c subunit 3 [Nannochloropsis gaditana]) HSP 1 Score: 642.1 bits (1655), Expect = 1.000e-180 Identity = 318/357 (89.08%), Postives = 340/357 (95.24%), Query Frame = 0 Query: 1 MLWVDKHRPMTLAKLDYHDDLTQRLQALSKDGEIPHLLFYGPPGAGKKTRIMALLREIYGAGVEKTRLEHKTFKTPTKRTIELTILASAYHQEINAAEAGSGDRFVVQEVIKEIAQSYNPTAALGLAGGRAFKVVVLTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGVRVPAPSHEIICTILNKISKKEACGTLPEELAMRVAQHSDRNLRRALLMLEACRVQQHPFTADQEVKVADWEEYIGKLATMLIEEQSPPRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVYWAAFYEHRVQVGSKEIFHLEAFVAKFMALYKAFVINMFGF 358 MLWVDKHRP TLAK+DYH+DLT RL+ALS+DGE+PHLLFYGPPGAGKKTRIMALLR+++GAGVEKTRLEHKTFKTPTKRTIELTILASA+HQEINAAEAGSGDRFVVQEVIKEIAQSYNP AA+G AGGRA+KVV+LTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLG+RV APSHE IC ILNK+SKKE+CG LPE LAMR+AQ S RNLRRALLMLEACRVQQHPF+A+QEVKV DWEEYI KLA +L EEQSP RLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVV+WAAFYEHRV++GSKEIFHLEAFVAKFMALYKAFVIN FGF Sbjct: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRTIELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTFGF 357
BLAST of NO06G02850 vs. NCBI_GenBank
Match: CBJ27673.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 447.6 bits (1150), Expect = 3.700e-122 Identity = 226/361 (62.60%), Postives = 286/361 (79.22%), Query Frame = 0 Query: 1 MLWVDKHRPMTLAKLDYHDDLTQRLQALSKDGEIPHLLFYGPPGAGKKTRIMALLREIYGAGVEKTRLEHKTFKTPTKRTIELTILASAYHQEINAAEAGSGDRFVVQEVIKEIAQSYNPTAALGLAGGR------AFKVVVLTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGVRVPAPSHEIICTILNKISKKEACGTLPEELAMRVAQHSDRNLRRALLMLEACRVQQHPFTADQEVKVADWEEYIGKLATMLIEEQSPPRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVYWAAFYEHRVQVGSKEIFHLEAFVAKFMALYKAFVINMF 356 MLWVDKHRP +L LD H +LT RL A+S+DGEIPHLLFYGP G+GKKTR++ALL+ IYG G E+ RLEH++FKTP+ R +ELT +AS YH E++ +AG DR+VVQ++IKEIAQ+ + +A++G G KVVVL VDRL++QAQA LRRTME+YT++CRLIL C+S S+VIEPVRSRCLGVRVPAPS +C++L + +KE+ TLP LA RVA+ S RNLRRA+LM+EACRVQQ+PF+ DQEV++ DWE YI +LA ++ EQSP RL+ AR+ LYELLTNCIP+D+ILKTL REL+ LD +L EV WAAFYEHR+ +GSKEI HLEAFVAKFM++YKA++I F Sbjct: 1 MLWVDKHRPKSLDSLDVHPELTTRLAAMSEDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYVVQDIIKEIAQNRSISASMGGGGSDDKKSKIGHKVVVLVGVDRLTKQAQAGLRRTMERYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPSESEVCSVLTSVCRKESL-TLPPALAARVAKVSKRNLRRAVLMIEACRVQQYPFSEDQEVQMTDWENYITQLAREVVLEQSPRRLLEAREKLYELLTNCIPADIILKTLTRELVKNLDCKLWGEVFKWAAFYEHRLHMGSKEILHLEAFVAKFMSIYKAYIIAEF 360
BLAST of NO06G02850 vs. NCBI_GenBank
Match: XP_009032296.1 (hypothetical protein AURANDRAFT_69595 [Aureococcus anophagefferens] >EGB12635.1 hypothetical protein AURANDRAFT_69595 [Aureococcus anophagefferens]) HSP 1 Score: 442.2 bits (1136), Expect = 1.500e-120 Identity = 223/355 (62.82%), Postives = 277/355 (78.03%), Query Frame = 0 Query: 1 MLWVDKHRPMTLAKLDYHDDLTQRLQALSKDGEIPHLLFYGPPGAGKKTRIMALLREIYGAGVEKTRLEHKTFKTPTKRTIELTILASAYHQEINAAEAGSGDRFVVQEVIKEIAQSYNPTAALGLAGGRAFKVVVLTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGVRVPAPSHEIICTILNKISKKEACGTLPEELAMRVAQHSDRNLRRALLMLEACRVQQHPFTADQEVKVADWEEYIGKLATMLIEEQSPPRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVYWAAFYEHRVQVGSKEIFHLEAFVAKFMALYKAFVINMF 356 MLWVDKHRP+ L K+ YH +L++RL L+ DG+IPHLLFYGP GAGKKTRIMALLR +YGAG EK RLEH+ FKTPT + IE+T +AS YH EIN ++AG+ DR+VVQEVIKEIAQS + G G +KVV+L EVDRL+RQAQA LRRTMEK T++CRLILCCN+ S+VI+P+RSRCLG+RV AP+ I +L+ ++ +E LP LA R+A+ S RNLRRA+L LE C+VQQ+PF A Q V + DWE+Y+ +A+ + EQSP RL+ RD LYELL+ CIP+DVILKTL RELL LDD++K EV+ WAAFYEHR+ G+KEIFHLEAFVAKFM LYK F++ MF Sbjct: 1 MLWVDKHRPLELGKMSYHGELSERLATLAADGDIPHLLFYGPSGAGKKTRIMALLRALYGAGAEKQRLEHRDFKTPTNKAIEVTTVASNYHIEINPSDAGNNDRYVVQEVIKEIAQS--GSLHKGDKGRVGYKVVLLVEVDRLTRQAQAGLRRTMEKCTSSCRLILCCNNPSKVIDPLRSRCLGIRVAAPTEAEIVAVLDDVAARERL-DLPPALAARIAKASKRNLRRAILSLEECKVQQYPFDAAQAVPLPDWEQYVVAIASDIAREQSPQRLLATRDKLYELLSKCIPADVILKTLARELLKNLDDEMKAEVLKWAAFYEHRITQGNKEIFHLEAFVAKFMCLYKKFMMEMF 352
BLAST of NO06G02850 vs. NCBI_GenBank
Match: XP_002288929.1 (replication factor C 37 KD subunit [Thalassiosira pseudonana CCMP1335] >EED94365.1 replication factor C 37 KD subunit [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 432.2 bits (1110), Expect = 1.600e-117 Identity = 218/362 (60.22%), Postives = 281/362 (77.62%), Query Frame = 0 Query: 1 MLWVDKHRPMTLAKLDYHDDLTQRLQALSKD-GEIPHLLFYGPPGAGKKTRIMALLREIYGAGVEKTRLEHKTFKTPTKRTIELTILASAYHQEINAAEAGSGDRFVVQEVIKEIAQSYNPTAALGLAGGRAFKVVVLTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGVRVPAPSHEIICTILNKISKKEACGTLPEELAMRVAQHSDRNLRRALLMLEACRV-----QQHPFTADQEVKVADWEEYIGKLATMLIEEQSPPRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVYWAAFYEHRVQVGSKEIFHLEAFVAKFMALYKAFVINMFG 357 MLWVDKHRP L +L YH LT RL++LS D G +PHLLFYGPPG+GKKTRI ALLR ++G G E+ RL+ +TF TPT RT+E+ +++S YH E++ +AG DRFV+Q+VIKE+A S N A +G A +KVVVL EVD+L+RQAQAALRRTMEKY+++CRLILCCN+ S+VI+PVRSRCLG+RV APSH+ I T+L +++KE+ TLP+ELA+ +A+ S+RNLRRALLMLE+C V +Q + DWE YI +LA+ + EQSP RL++AR+ LYELL NCIP+ ILKTL+ ELLP LDD +K EVV WAAFYEHR+ +GSKEIFHLEAF+AKFM++YK ++ +MFG Sbjct: 1 MLWVDKHRPTRLTQLTYHGTLTARLESLSADPGGLPHLLFYGPPGSGKKTRIAALLRSVFGHGSERLRLDKRTFTTPTNRTVEINMISSNYHIEMSPGDAGLNDRFVIQDVIKEMASSKN-IATVGTANNE-YKVVVLVEVDKLTRQAQAALRRTMEKYSSSCRLILCCNNPSKVIDPVRSRCLGIRVAAPSHDEIATVLKTVARKESI-TLPDELAISLARSSNRNLRRALLMLESCHVTTRDDSPKELKPNQPIPHTDWERYISQLASEITREQSPKRLIMAREKLYELLINCIPAQTILKTLVMELLPTLDDSIKGEVVTWAAFYEHRIALGSKEIFHLEAFIAKFMSIYKRYINDMFG 359
BLAST of NO06G02850 vs. NCBI_GenBank
Match: XP_008899859.1 (hypothetical protein PPTG_07433 [Phytophthora parasitica INRA-310] >ETI54607.1 hypothetical protein F443_02615 [Phytophthora parasitica P1569] >ETM00954.1 hypothetical protein L917_02398 [Phytophthora parasitica] >ETM54129.1 hypothetical protein L914_02492 [Phytophthora parasitica] >ETN15283.1 hypothetical protein PPTG_07433 [Phytophthora parasitica INRA-310] >ETO83361.1 hypothetical protein F444_02615 [Phytophthora parasitica P1976] >ETP52395.1 hypothetical protein F442_02591 [Phytophthora parasitica P10297] >KUF80072.1 Replication factor C subunit 3 [Phytophthora nicotianae] >KUF96724.1 Replication factor C subunit 3 [Phytophthora nicotianae]) HSP 1 Score: 424.9 bits (1091), Expect = 2.500e-115 Identity = 212/359 (59.05%), Postives = 278/359 (77.44%), Query Frame = 0 Query: 1 MLWVDKHRPMTLAKLDYHDDLTQRLQALSKDGEIPHLLFYGPPGAGKKTRIMALLREIYGAGVEKTRLEHKTFKTPTKRT-IELTILASAYHQEINAAEAGSGDRFVVQEVIKEIAQSYNPTAALGLAGGRAFKVVVLTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGVRVPAPSHEIICTILNKISKKEA---CGTLPEELAMRVAQHSDRNLRRALLMLEACRVQQHPFTADQEVKVADWEEYIGKLATMLIEEQSPPRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVYWAAFYEHRVQVGSKEIFHLEAFVAKFMALYKAFVINMF 356 MLWVDK+RP +L+ LD+H ++T+RL LS+ ++PHLL YGP GAGKKTRIMALLR +YG G K RLEHK+FK P + T +E+T +AS +H E+N ++ G+ DR VVQEV+KEIAQ + R FKVV+L EVDRLS+ AQ ALRRTMEKYTA CRLILCCN+ S+VI+P+RSRCLGVRV AP+ + ICTIL + KKE C L +E+A++ S+RNLRRALLMLE CRVQ +PF+ DQ++++ WEEYI LA ++++EQSP L+ AR+M+YEL++NC+PS+VILK L REL+ +LDD LKHE+V WA++YEHR+Q GSK+IFH EAF+AKFM LYK F++ ++ Sbjct: 1 MLWVDKYRPTSLSSLDFHPEVTKRLSNLSQSSDLPHLLVYGPSGAGKKTRIMALLRALYGDGALKVRLEHKSFKAPNRSTKVEITTVASNFHIEMNPSDVGNNDRLVVQEVLKEIAQYH----LADTNSQRPFKVVLLMEVDRLSKNAQHALRRTMEKYTATCRLILCCNNPSKVIDPLRSRCLGVRVGAPTMDDICTILQGVCKKEGLDYCAPLGKEIALK----SERNLRRALLMLETCRVQSYPFSPDQQIQLPAWEEYICSLAKVVLQEQSPAGLLKAREMIYELISNCVPSEVILKVLCRELMSRLDDDLKHELVQWASYYEHRMQRGSKDIFHFEAFLAKFMTLYKKFLLELY 351
BLAST of NO06G02850 vs. NCBI_GenBank
Match: ETK94467.1 (hypothetical protein L915_02498 [Phytophthora parasitica] >ETL47844.1 hypothetical protein L916_02469 [Phytophthora parasitica] >ETP24441.1 hypothetical protein F441_02573 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 422.9 bits (1086), Expect = 9.700e-115 Identity = 211/359 (58.77%), Postives = 278/359 (77.44%), Query Frame = 0 Query: 1 MLWVDKHRPMTLAKLDYHDDLTQRLQALSKDGEIPHLLFYGPPGAGKKTRIMALLREIYGAGVEKTRLEHKTFKTPTKRT-IELTILASAYHQEINAAEAGSGDRFVVQEVIKEIAQSYNPTAALGLAGGRAFKVVVLTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGVRVPAPSHEIICTILNKISKKEA---CGTLPEELAMRVAQHSDRNLRRALLMLEACRVQQHPFTADQEVKVADWEEYIGKLATMLIEEQSPPRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVYWAAFYEHRVQVGSKEIFHLEAFVAKFMALYKAFVINMF 356 MLWVDK+RP +L+ LD+H ++T+RL LS+ ++PHLL YGP GAGKKTRIMALLR +YG G K RLEHK+FK P + T +E+T +AS +H E+N ++ G+ DR VVQEV+KEIAQ + R FKVV+L EVDRLS+ AQ ALRRTMEKYTA CRLILCCN+ S+VI+P+RSRCLGVRV AP+ + ICTIL + KKE C L +E+A++ S+RNLRRALLMLE CRVQ +PF+ DQ++++ WEE+I LA ++++EQSP L+ AR+M+YEL++NC+PS+VILK L REL+ +LDD LKHE+V WA++YEHR+Q GSK+IFH EAF+AKFM LYK F++ ++ Sbjct: 1 MLWVDKYRPTSLSSLDFHPEVTKRLSNLSQSSDLPHLLVYGPSGAGKKTRIMALLRALYGDGALKVRLEHKSFKAPNRSTKVEITTVASNFHIEMNPSDVGNNDRLVVQEVLKEIAQYH----LADTNSQRPFKVVLLMEVDRLSKNAQHALRRTMEKYTATCRLILCCNNPSKVIDPLRSRCLGVRVGAPTMDDICTILQGVCKKEGLDYCAPLGKEIALK----SERNLRRALLMLETCRVQSYPFSPDQQIQLPAWEEHICSLAKVVLQEQSPAGLLKAREMIYELISNCVPSEVILKVLCRELMSRLDDDLKHELVQWASYYEHRMQRGSKDIFHFEAFLAKFMTLYKKFLLELY 351
BLAST of NO06G02850 vs. NCBI_GenBank
Match: XP_002997106.1 (replication factor C subunit 3 [Phytophthora infestans T30-4] >EEY69694.1 replication factor C subunit 3 [Phytophthora infestans T30-4]) HSP 1 Score: 422.9 bits (1086), Expect = 9.700e-115 Identity = 211/359 (58.77%), Postives = 277/359 (77.16%), Query Frame = 0 Query: 1 MLWVDKHRPMTLAKLDYHDDLTQRLQALSKDGEIPHLLFYGPPGAGKKTRIMALLREIYGAGVEKTRLEHKTFKTPTKRT-IELTILASAYHQEINAAEAGSGDRFVVQEVIKEIAQSYNPTAALGLAGGRAFKVVVLTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGVRVPAPSHEIICTILNKISKKEA---CGTLPEELAMRVAQHSDRNLRRALLMLEACRVQQHPFTADQEVKVADWEEYIGKLATMLIEEQSPPRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVYWAAFYEHRVQVGSKEIFHLEAFVAKFMALYKAFVINMF 356 MLWVDK+RP +L+ LD+H ++T+RL LS+ ++PHLL YGP GAGKKTRIMALLR +YG G K RLEHK+FK P + T +E+T +AS +H E+N ++ G+ DR VVQEV+KEIAQ + R FKVV+L EVDRLS+ AQ ALRRTMEKYTA CRLILCCN+ S+VI+P+RSRCLGVRV AP+ + ICTIL + KE C L +E+A++ S+RNLRRALLMLE CRVQ +PF+ DQ++++ WEEYI LA ++++EQSP L+ AR+M+YEL++NC+PS+VILK L REL+ +LDD LKHE+V WA++YEHR+Q GSK+IFH EAF+AKFM LYK F++ ++ Sbjct: 1 MLWVDKYRPTSLSSLDFHPEVTKRLSNLSQSSDLPHLLVYGPSGAGKKTRIMALLRALYGDGALKVRLEHKSFKAPNRSTKVEITTVASNFHIEMNPSDVGNNDRLVVQEVLKEIAQYH----LADTNAHRPFKVVLLMEVDRLSKNAQHALRRTMEKYTATCRLILCCNNPSKVIDPLRSRCLGVRVGAPTTDDICTILQGVCSKEGLDYCAPLGKEIALK----SERNLRRALLMLETCRVQNYPFSPDQQIQLPAWEEYICSLAKVVLQEQSPAGLLKAREMIYELISNCVPSEVILKVLCRELMSRLDDDLKHELVQWASYYEHRMQRGSKDIFHFEAFLAKFMTLYKKFLLELY 351
BLAST of NO06G02850 vs. NCBI_GenBank
Match: XP_003219205.1 (PREDICTED: replication factor C subunit 3 [Anolis carolinensis]) HSP 1 Score: 422.2 bits (1084), Expect = 1.600e-114 Identity = 213/350 (60.86%), Postives = 263/350 (75.14%), Query Frame = 0 Query: 2 LWVDKHRPMTLAKLDYHDDLTQRLQALSKDGEIPHLLFYGPPGAGKKTRIMALLREIYGAGVEKTRLEHKTFKTPTKRTIELTILASAYHQEINAAEAGSGDRFVVQEVIKEIAQSYNPTAALGLAGGRAFKVVVLTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGVRVPAPSHEIICTILNKISKKEACGTLPEELAMRVAQHSDRNLRRALLMLEACRVQQHPFTADQEVKVADWEEYIGKLATMLIEEQSPPRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVYWAAFYEHRVQVGSKEIFHLEAFVAKFMALYKAFV 352 LWVDKHRP +L KLDYH + RL+ L + G+ PHLL YGP GAGKKTRIM LLRE+YGAGVEK R+EH+ P+K+ IE++ +AS YH E+N ++AG DR V+QE++K +AQS L + R FKVV+LTEVD+L++ AQ ALRRTMEKY A CRLILCCNS S+VI P+RSRCL VRVPAPS IC++L+ + KKE LP+ELA R+A+ S RNLR+ALLM EACRVQQHPFT DQ++ DWE Y+ + A ++ EQ+P RL R LYELLT+CIP ++I+K LL ELL D QLK EV AAFYEHR+Q+GSK I+HLEAFVAKFMALYK F+ Sbjct: 3 LWVDKHRPTSLGKLDYHKEQAARLRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELYGAGVEKLRIEHQIITAPSKKKIEISTIASNYHLEVNPSDAGISDRVVIQELLKTVAQSQQ----LETSTQRDFKVVILTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCLAVRVPAPSIGDICSVLSNVCKKEGL-VLPQELAQRIAEKSGRNLRKALLMCEACRVQQHPFTPDQDISETDWEVYLRETANAIVSEQTPQRLFEVRGRLYELLTHCIPPEIIIKGLLCELLNNCDGQLKGEVAQMAAFYEHRLQLGSKAIYHLEAFVAKFMALYKKFM 347
BLAST of NO06G02850 vs. NCBI_GenBank
Match: XP_006879648.1 (PREDICTED: replication factor C subunit 3 [Elephantulus edwardii]) HSP 1 Score: 421.0 bits (1081), Expect = 3.700e-114 Identity = 212/350 (60.57%), Postives = 268/350 (76.57%), Query Frame = 0 Query: 2 LWVDKHRPMTLAKLDYHDDLTQRLQALSKDGEIPHLLFYGPPGAGKKTRIMALLREIYGAGVEKTRLEHKTFKTPTKRTIELTILASAYHQEINAAEAGSGDRFVVQEVIKEIAQSYNPTAALGLAGGRAFKVVVLTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGVRVPAPSHEIICTILNKISKKEACGTLPEELAMRVAQHSDRNLRRALLMLEACRVQQHPFTADQEVKVADWEEYIGKLATMLIEEQSPPRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVYWAAFYEHRVQVGSKEIFHLEAFVAKFMALYKAFV 352 LWVDK+RP +L++LD+H + +L+ L + G+ PHLL YGP GAGKKTRIM +LRE+YGAGVEK R+EH+T TP+K+ IE++ +AS YH E+N ++AG+ DR V+QE++K +AQS L R FKVV+LTEVD+L++ AQ ALRRTMEKY + CRLILCCNS S+VI P+RSRCL VRVPAPS E IC +L+ + KKE TLP LA R+A+ S RNLRRALLM EACRVQQ+PFTADQE+ ADWE Y+ + A ++ +QSPPRL+ R LYELLT+CIP ++I+K LL ELL D QLK EV AA YEHR+Q+GSK ++HLEAFVAKFMALYK F+ Sbjct: 3 LWVDKYRPCSLSRLDFHREQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGAGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ----LETGSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIAPIRSRCLAVRVPAPSTEDICQVLSTVCKKEGL-TLPAPLAQRLAEKSGRNLRRALLMCEACRVQQYPFTADQEIPEADWEVYLRETAHAIVSQQSPPRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKAEVAQAAASYEHRLQLGSKAVYHLEAFVAKFMALYKKFM 347
BLAST of NO06G02850 vs. NCBI_GenBank
Match: XP_007889461.1 (PREDICTED: replication factor C subunit 3 [Callorhinchus milii]) HSP 1 Score: 420.2 bits (1079), Expect = 6.300e-114 Identity = 209/350 (59.71%), Postives = 269/350 (76.86%), Query Frame = 0 Query: 2 LWVDKHRPMTLAKLDYHDDLTQRLQALSKDGEIPHLLFYGPPGAGKKTRIMALLREIYGAGVEKTRLEHKTFKTPTKRTIELTILASAYHQEINAAEAGSGDRFVVQEVIKEIAQSYNPTAALGLAGGRAFKVVVLTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGVRVPAPSHEIICTILNKISKKEACGTLPEELAMRVAQHSDRNLRRALLMLEACRVQQHPFTADQEVKVADWEEYIGKLATMLIEEQSPPRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVYWAAFYEHRVQVGSKEIFHLEAFVAKFMALYKAFV 352 LWVDK+RP L KLDYH D +L+ L + G+ PHLL YGP G+GKKTRIM LLRE+YGAG+EK R+EH++ TP+K+ +E++ +AS YH E+NA++AG+ DR V+QE+IK +AQS L + R FKVVVLTEVDRL++ AQ ALRRTMEKY + CRLILCCNS S+VI P+RSRCL VRVPAPS E IC +L+ + KKE C LP+ELA ++A+ S+RNLR+ALLM EACRVQQ+PF+ DQ++ DWE Y+ + A ++ +Q+P RL+ R LYELLT+CIP ++I+K LL ELL D QLK EV AA+YEHR+Q+GSK I+HLEAFVAKFMA+YK F+ Sbjct: 3 LWVDKYRPTALGKLDYHKDQAGQLRNLVQCGDFPHLLVYGPSGSGKKTRIMCLLRELYGAGIEKLRIEHQSITTPSKKKLEISTIASNYHLEVNASDAGNNDRVVIQELIKTVAQSQQ----LETSTQRDFKVVVLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVISPIRSRCLAVRVPAPSIEEICHVLSGVCKKE-CLILPQELARKIAEQSNRNLRKALLMCEACRVQQYPFSVDQDIPETDWEVYLRETANAIVNQQTPQRLLEVRARLYELLTHCIPPEIIMKGLLSELLNNCDGQLKGEVSQMAAYYEHRLQLGSKAIYHLEAFVAKFMAIYKQFM 347 The following BLAST results are available for this feature:
BLAST of NO06G02850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02850 ID=NO06G02850|Name=NO06G02850|organism=Nannochloropsis oceanica|type=gene|length=1432bpback to top protein sequence of NO06G02850.1 >NO06G02850.1-protein ID=NO06G02850.1-protein|Name=NO06G02850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=358bpback to top Synonyms
Publications
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