NO06G02790, NO06G02790 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G02790
Unique Name	NO06G02790
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3058
Alignment location	chr6:788748..791805 +

Link to JBrowse

Properties


Property Name	Value
Description	Armadillo-like helical

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:788748..791805 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0003723	RNA binding
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR001313	Pumilio_RNA-bd_rpt

Homology

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BLAST of NO06G02790 vs. NCBI_GenBank
Match: EWM26276.1 (Armadillo-like helical [Nannochloropsis gaditana])

HSP 1 Score: 775.4 bits (2001), Expect = 2.100e-220
Identity = 477/955 (49.95%), Postives = 584/955 (61.15%), Query Frame = 0

Query:   20 TSHGPARPRRPDSETLTYLRSLEPLIDRSVAALLQRQQQEQGRGGCRGTV--DGDDIQXXXXXXXXXXXXXXLLVSNLINELMFKVASLAMDRHAAPLLEKLARLCTRKQLARLLEGCLGYAASLASNRYSSHVLQTLLSLAGPMIEAEMRGXXXXXXXXXXXXXXXLDVDG---EETTPKSPVTLCGSASKLAEELHDSWLSLIYDICGTHSMRALFCLLTGMPVVAERRGKNAKHQHAIETAIVLDFQHCAA--EGRRAGNTGEAVNLHTTPLVMFQVPDTFSIVLDEMIAELGRIELMTLHQTLCDAYANPALCLLLQAVARKEGAARQELTLSPAGLFFNKVVQKALCTHTPSRCAEVVDAMAGESLSSRFLEAVLWHTDPSTFLVQFFEICMQGKVMEYAEDEVANFVLQTWLQRTESAKQIKVVLEELGPSFGKLVKEKRRSGVLWRLAGACLRLGKGEKKIVKALLLALGGKEGEEVKGEGTT---LTAAVRAVQTLLALRIGQEDAGGGEKKGRGVGRDDGRLYLSVPGARLLECVMRFPGREGGEMGVGWVFCQAVLELPSESLVAIAKDNVGSRTILDPLLELSSTAT-AAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLADHLADKLRGHFASLALHPVGYHVLTKCFTTGGLSLEGKRAIAQELMQAESRLAGCHFGRRALGVVGVSLFRGNRKKWEELQREGKKKKQVLDNLFEMLEREVVVAGKGQRKRQVKEGDKEEGEGGKMRSPSYEKEGK----------------DGESFLDLLMGNKQ--GKXXXXXXXXXXXXXXXXXXXDLGFVLEAIKRSGCGSETLRRSALDNGYGR--KRKISRGASSEEQERALPRRRKDVPAAN-AAPSSAVPKPKKKYRHDNDSKH---ARGTAVEKAQRLLGTRTMMSKSELLTAVEDLERDVK 940
            T H  +RPRRP+SETLTYLRSLEP+ID+S+ ALLQ+   +      RGT+  D                   LLV NLI+EL FKVASLAMDRHAAP LEK+ARLCTRKQLA LL GCLGYAA LASNRYSSHVLQT LSL GPM+EAE+ G                   G   +E  P   ++L  +A+KLAEEL  SWLSLI+D+CGTHSMRA FCLL GMP VAE+RG++AKH+H IETA+ + +Q   A     R+   GE  NLH+TPLVM +VP   + +L EM+ EL  +EL  LHQ LCD YA+PAL LL+QAVARKE A RQ+  L   G+FF ++V KALC     RCAEVV AMAGE++SSRFLEAVLWHT P+    + FE C++G+VME+AED VANFVLQTWLQRTES + +K  L+EL P   +LV E RR+GVLWRLAGACLRL  G++++V  ++  LGG  GE  K EGT    L  AV A+QT L L +GQ     G ++G      D RL+L+VPGARL EC+MRFP   G   G GW+ C+AVLELP E+LVA+A DN+GSRT+LDPLL  SS  T                                           LAD LA +L+GH+ASLA HPVG+H+LTKCF++ GLSLE K+ + QEL+ AESRLAG HFGRRAL  VGVSL+R N+ KWEE Q+EG++KK+VLD+L +MLE E  VAGKG+   Q     K  G   K R    EK  K                   S  DLLMG  +   K                    L FVLEA K + C S+T      ++   R  K++ S    SE+QERA  R+     A N ++  SA     K  R D   K    A  TA+EKAQ +LG R MMSK EL +AVE LE+++K
Sbjct:   25 TLHAYSRPRRPESETLTYLRSLEPVIDKSITALLQQNSNQ------RGTIVNDAQKRSQEVEEEENEAEERSLLVQNLIDELTFKVASLAMDRHAAPTLEKVARLCTRKQLAHLLHGCLGYAACLASNRYSSHVLQTFLSLTGPMLEAELLGIGEEEDRDEGLDDKPPFSTGSEIDEAAPGEGISLADTATKLAEELRASWLSLIFDLCGTHSMRAFFCLLAGMPAVAEKRGRHAKHKHGIETAVAVGYQGIGAGPGDVRSKTQGETGNLHSTPLVMHRVPARLADILGEMVTELANMELRDLHQALCDPYASPALGLLVQAVARKESAVRQDFHLDTDGIFFKQLVAKALCFKDADRCAEVVYAMAGETMSSRFLEAVLWHTAPTQVAARIFEACIRGRVMEFAEDSVANFVLQTWLQRTESPEHLKAALDELAPRVRRLV-ETRRAGVLWRLAGACLRLRHGQEEMVDGVVSGLGGAGGETKKEEGTNSSRLDMAVLALQTGLELDVGQ-----GHREGGHGTEHDRRLHLNVPGARLFECLMRFPTSSGKHRGSGWIICRAVLELPPETLVAVATDNIGSRTLLDPLLGASSAGTELGAATIERRERSEGGGRTAENRGEKSKKRKTSDPHRDEINSSLADRLAQRLQGHYASLAAHPVGFHILTKCFSSSGLSLEWKKNVVQELIDAESRLAGGHFGRRALREVGVSLYRVNQAKWEEAQKEGERKKEVLDDLLDMLEHEAEVAGKGRGASQ--RNGKMHG-ATKNRKEDVEKTSKXXXXXNTEQQQLEPDSQNHSVFDLLMGASKYMAKSKERRGPDEQAEGAARDSKSLEFVLEATK-TPCKSDTNIAVPSESKSKRVHKKRQSESGRSEKQERATRRQGNLQHAKNESSAPSATKSLFKSSRQDGGLKKNHLANKTAIEKAQVILGNRAMMSKRELFSAVEGLEQEIK 963

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BLAST of NO06G02790 vs. NCBI_GenBank
Match: XP_005852766.1 (hypothetical protein NGA_2079800, partial [Nannochloropsis gaditana CCMP526] >EKU23068.1 hypothetical protein NGA_2079800, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 463.4 bits (1191), Expect = 1.700e-126
Identity = 251/464 (54.09%), Postives = 311/464 (67.03%), Query Frame = 0

Query:  281 NLHTTPLVMFQVPDTFSIVLDEMIAELGRIELMTLHQTLCDAYANPALCLLLQAVARKEGAARQELTLSPAGLFFNKVVQKALCTHTPSRCAEVVDAMAGESLSSRFLEAVLWHTDPSTFLVQFFEICMQGKVMEYAEDEVANFVLQTWLQRTESAKQIKVVLEELGPSFGKLVKEKRRSGVLWRLAGACLRLGKGEKKIVKALLLALGGKEGEEVKGEGTT---LTAAVRAVQTLLALRIGQEDAGGGEKKGRGVGRDDGRLYLSVPGARLLECVMRFPGREGGEMGVGWVFCQAVLELPSESLVAIAKDNVGSRTILDPLLELSSTAT-AAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLADHLADKLRGHFASLALHPVGYHVLTKCFTTGGLSLEGKRAIAQELMQAESRLAGCHFGRRALGVVGVSLFRGNRKKWEELQREGKKKKQ 741
            NLH+TPLVM +VP   + +L EM+ EL  +EL  LHQ LCD YA+PAL LL+QAVARKE A RQ+  L   G+FF ++V KALC     RCAEVV AMAGE++SSRFLEAVLWHT P+    + FE C++G+VME+AED VANFVLQTWLQRTES + +K  L+EL P   +LV E RR+GVLWRLAGACLRL  G++++V  ++  LGG  GE  K EGT    L  AV A+QT L L +GQ     G ++G      D RL+L+VPGARL EC+MRFP   G   G GW+ C+AVLELP E+LVA+A DN+GSRT+LDPLL  SS  T                                           LAD LA +L+GH+ASLA HPVG+H+LTKCF++ GLSLE K+ + QEL+ AESRLAG HFGRRAL  VGVSL+R N+ KWEE Q+EG++KK+
Sbjct:    3 NLHSTPLVMHRVPARLADILGEMVTELANMELRDLHQALCDPYASPALGLLVQAVARKESAVRQDFHLDTDGIFFKQLVAKALCFKDADRCAEVVYAMAGETMSSRFLEAVLWHTAPTQVAARIFEACIRGRVMEFAEDSVANFVLQTWLQRTESPEHLKAALDELAPRVRRLV-ETRRAGVLWRLAGACLRLRHGQEEMVDGVVSGLGGAGGETKKEEGTNSSRLDMAVLALQTGLELDVGQ-----GHREGGHGTEHDRRLHLNVPGARLFECLMRFPTSSGKHRGSGWIICRAVLELPPETLVAVATDNIGSRTLLDPLLGASSAGTELGAATIERRERSEGGGRTAENRGEKSKKRKTSDPHRDEINSSLADRLAQRLQGHYASLAAHPVGFHILTKCFSSSGLSLEWKKNVVQELIDAESRLAGGHFGRRALREVGVSLYRVNQAKWEEAQKEGERKKE 460

[Close]

BLAST of NO06G02790 vs. NCBI_GenBank
Match: XP_005852764.1 (rrna processing protein, partial [Nannochloropsis gaditana CCMP526] >EKU23066.1 rrna processing protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 272.7 bits (696), Expect = 4.400e-69
Identity = 153/274 (55.84%), Postives = 181/274 (66.06%), Query Frame = 0

Query:   20 TSHGPARPRRPDSETLTYLRSLEPLIDRSVAALLQRQQQEQGRGGCRGTV--DGDDIQXXXXXXXXXXXXXXLLVSNLINELMFKVASLAMDRHAAPLLEKLARLCTRKQLARLLEGCLGYAASLASNRYSSHVLQTLLSLAGPMIEAEMRGXXXXXXXXXXXXXXXLDVDG---EETTPKSPVTLCGSASKLAEELHDSWLSLIYDICGTHSMRALFCLLTGMPVVAERRGKNAKHQHAIETAIVLDFQHCAA--EGRRAGNTGEAVNLHTTP 287
            T H  +RPRRP+SETLTYLRSLEP+ID+S+ ALLQ+   +      RGT+  D                   LLV NLI+EL FKVASLAMDRHAAP LEK+ARLCTRKQLA LL GCLGYAA LASNRYSSHVLQT LSL GPM+EAE+ G                   G   +E  P   ++L  +A+KLAEEL  SWLSLI+D+CGTHSMRA FCLL GMP VAE+RG++AKH+H IETA+ + +Q   A     R+   GE  NLH+TP
Sbjct:   38 TLHAYSRPRRPESETLTYLRSLEPVIDKSITALLQQNSNQ------RGTIVNDAQKRSQEVEEEENEAEERSLLVQNLIDELTFKVASLAMDRHAAPTLEKVARLCTRKQLAHLLHGCLGYAACLASNRYSSHVLQTFLSLTGPMLEAELLGIGEEEDRDEGLDDKPPFSTGSEIDEAAPGEGISLADTATKLAEELRASWLSLIFDLCGTHSMRAFFCLLAGMPAVAEKRGRHAKHKHGIETAVAVGYQGIGAGPGDVRSKTQGETGNLHSTP 305

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BLAST of NO06G02790 vs. NCBI_GenBank
Match: XP_009841102.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV69245.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 233.4 bits (594), Expect = 2.900e-57
Identity = 196/658 (29.79%), Postives = 302/658 (45.90%), Query Frame = 0

Query:   90 LLVSNLINELMFKVASLAMDRHAAPLLEKLARLCTRKQLARLLEGCLGYAASLASNRYSSHVLQTLLSLAGPMIEAEMRGXXXXXXXXXXXXXXXLDVDGEETTPKSPVTLCGSASKLAEELHDSWLSLIYDICGTHSMRALFCLLTGMPVVAERRGKNAKHQHAIETAIVLDFQHCAAEGRRAGNTGEAVNLHTTPLVMFQVPDTFSIVLDEMIAELGRIELMTLHQTLCDAYANPALCLLLQAVARKEGAARQELTLSPAGLFFNKVVQKALCTHTPSRCAEVVDAMAGESLSSRFLEAVLWHTDPSTFLVQFFEICMQGKVMEYAEDEVANFVLQTWLQRTESAKQIKVVLEELGPSFGKLVKEKRRSGVLWRLAGACLRLGKGEKKIVKALLLALGGKEGEEVKGEGTTLTAAVRAVQTLLALRIGQEDAGGGEKKGRGVGRDDGRLYLSVPGARLLECVMRFPGREGGEMGVGWVFCQAVLELPSESLVAIAKDNVGSRTILDPLLELSSTATAAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLADHLADKLRGHFASLALHPVGYHVLTKCFTTGGLSLEGKRAIAQELMQAESRLAGCHFGRRALGVVGVSLFRGNRKKWEELQREGKKKKQVLDNLFE 748
            +L+ N++ E+  +VAS A DRHA   +E L    + +QL   L    GY + L +NRYSSHVLQ LLS  G ++  E++G                D D +      P++    A  +  E+   WL+LI D+  +H MRA+FC L G   V E+RGK  KH+        L FQ        A  T E+ +          VP  F   L EM+  +       L + + DA+A P L + ++              ++P+ +  +KV+ K L  + P R ++     A +S++S FLEAV    D   +    FE C+QG+++E++E  ++NFV+Q ++QRT ++   + VL+EL  +   L+    R+GV+WRLA  C R    EK    AL+ A+  ++ E  K E     A    V  L+ L++                  + RL L+VPGAR++E +++FPG       V     Q++L+L S  LVA+AKD+ GSR +++P+   S    A +                                           L +KL+G F SL L   G   + KCF    +S+  K AIA+EL   + +LAG HF    L    V  F+ NR+KW       KK K++  +  +
Sbjct:   57 MLLWNVLEEIAPRVASAASDRHACEFIEVLVDHMSAQQLRFFLHKMEGYFSHLWTNRYSSHVLQRLLSKVGTIVGNEVKGEADD------------DDDPDRAADVPPMSSLIVA--MCSEVQAEWLTLINDVSASHVMRAVFCALAGRAPVLEKRGKKGKHK-------ALQFQ-------SAQTTAESTS----------VPREFEDTLSEMLELVLGSSDGRLVELMSDAHAGPVLSMAVR--------------VAPSAV-QSKVIFKLLKWNDPERSSQRFYDFAADSVASHFLEAVCHSCDEDVW-AAIFERCLQGRLLEFSEHPISNFVVQNFIQRTPTSDLAETVLDELQGALWSLL-SSHRAGVIWRLAELCERFKLREKSFFLALVAAI--EKLEAAKPE----VARRDVVSALIGLQLS--------------NNQNSRLTLNVPGARIVETLLKFPG------DVSVPLVQSILKLNSLQLVALAKDSTGSRCLVEPIW-ASDNQDAKLA------------------------------------------LFEKLQGQFGSLVLDRNGSFTVLKCFDV--VSVAEKTAIAEELSAVDGKLAGSHFASMVLTHCNVHEFKSNREKWLSSHERKKKVKELFSDFMD 588

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BLAST of NO06G02790 vs. NCBI_GenBank
Match: XP_008874672.1 (hypothetical protein H310_10170 [Aphanomyces invadans] >ETV96895.1 hypothetical protein H310_10170 [Aphanomyces invadans])

HSP 1 Score: 230.7 bits (587), Expect = 1.900e-56
Identity = 200/655 (30.53%), Postives = 301/655 (45.95%), Query Frame = 0

Query:   90 LLVSNLINELMFKVASLAMDRHAAPLLEKLARLCTRKQLARLLEGCLGYAASLASNRYSSHVLQTLLSLAGPMIEAEMRGXXXXXXXXXXXXXXXLDVDGEETTPKSPVTLCGSASKLAEELHDSWLSLIYDICGTHSMRALFCLLTGMPVVAERRGKNAKHQHAIETAIVLDFQHCAAEGRRAGNTGEAVNLHTTPLVMFQVPDTFSIVLDEMIAELGRIELMTLHQTLCDAYANPALCLLLQAVARKEGAARQELTLSPAGLFFNKVVQKALCTHTPSRCAEVVDAMAGESLSSRFLEAVLWHTDPSTFLVQFFEICMQGKVMEYAEDEVANFVLQTWLQRTESAKQIKVVLEELGPSFGKLVKEKRRSGVLWRLAGACLRLGKGEKKIVKALLLALGGKEGEEVKGEGTTLTAAVRAVQTLLALRIGQEDAGGGEKKGRGVGRDDGRLYLSVPGARLLECVMRFPGREGGEMGVGWVFCQAVLELPSESLVAIAKDNVGSRTILDPLLELSSTATAAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLADHLADKLRGHFASLALHPVGYHVLTKCFTTGGLSLEGKRAIAQELMQAESRLAGCHFGRRALGVVGVSLFRGNRKKWEELQREGKKKKQVLDN 745
            +L+ N++ E+  ++AS A DRHA   +E L    + +QL   L    GY + L +NRYSSHVLQ +LS  G ++E E++G    XXXXX          G        VT+C        E+ + WL+LI D+  +H MRA+FC L G   V E+RGK  KH+        L FQ          N  +A +  T      +VP  F   L EM+  +       L + + D++A P L + ++              ++PA +  +KV+ K L  +   R  +     AG+S++S FLEAV    D   +    FE C+QG+++E+AE  ++NFV+Q ++QRT + +  + VL+EL  +   L+    R+GV+WRLA  C+R    EK     L L  G ++ E  K E     A    V  L+ L++                  + RL L+VPGAR++E +++FP        V     Q++L+L S  LVA+AKD+ GSR +++P+    S                                            +LA  L +KL+G F SL L   G   + KCF    + L  K AI  EL   + +LAG HF    L    V  F+ NR+KW       KK K++  +
Sbjct:   52 MLLWNVLEEIAPRIASAASDRHACAYIEVLVDHMSAQQLRFFLHKMEGYFSHLWTNRYSSHVLQRVLSKVGAIVENEVKGETADXXXXXR-------AAGVPEMATLVVTMCA-------EVQNEWLTLINDVSASHVMRAVFCALAGRAPVVEKRGKKGKHK-------ALQFQ---------ANPSDAASGST------EVPAAFQDTLAEMLELVLASSDGKLMELMSDSHAGPVLSMAVR--------------VAPASI-QSKVIFKLLKWNDEERSKQRFYDFAGDSVASHFLEAVCHSCDEDVW-TAVFERCLQGRLLEFAEHAISNFVVQNFIQRTPTPEFAETVLDELQGALWSLL-SMHRAGVIWRLAELCVRFKLREKSFF--LALVAGVEKLESAKPE----PARRDVVSALIGLQLS--------------NNQNSRLTLNVPGARIIETMLKFP------TDVATPLTQSILKLNSLQLVALAKDSTGSRCLVEPIWASES-----------------------------------------DDAKLA--LYEKLKGQFGSLVLDRNGSFTVLKCFDV--MPLAEKTAIVDELAAVDGKLAGSHFASMVLTHCNVHEFKSNREKWLSSHERKKKVKELFSD 582

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BLAST of NO06G02790 vs. NCBI_GenBank
Match: CBN78788.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 228.0 bits (580), Expect = 1.200e-55
Identity = 215/641 (33.54%), Postives = 316/641 (49.30%), Query Frame = 0

Query:   91 LVSNLINELMFKVASLAMDRHAAPLLEKLARLCTRKQLARLLEGCLGYAASLASNRYSSHVLQTLLSLAGPMIEAEMRGXXXXXXXXXXXXXXXLD------VDGEETTPKSPVTLCGSASKLAEELHDSWLSLIYDICGTHSMRALFCLLTGMPVVAERRGKNAKHQHAIETAI-------------VLDFQHCAAEGRRAGNTG---EAVNLHTTPLVMFQVPDTFSIVLDEMIAELGRIELMTLHQTLCDAYANPALCLLLQAVARKEGAARQELTLSPAGL----FFNKVVQKALCTHTPSRCAEVVDAMAGESLSSRFLEAVLWHTDPSTFLVQFFEICMQGKVMEYAEDEVANFVLQTWLQRTESAKQIKVVLEELGPSFGKLVKEKRRSGVLWRLAGACLRL---GKGEKKIVKALLLALGGKEGEEVKGEGTTLTAAVRAVQTLLALRIGQEDAGGGEKKGR------------GVGRDDGRLYLSVPGARLLECVMRFPGREGGEMGVGWVFCQAVLELPSESLVAIAKDNVGSRTILDPLLELSSTATAAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLADHLADKLRGHFASLALHPVGYHVLTKCFTTGGLSLEGKR 691
            L+ N++ EL  + AS+  DR  + + EK+AR  +  QL  +L  C GY  SLA+NRYSSHVLQTLLS+AG ++E E+ GXXXXXXXXXXXXXXX         DG +   K    L      L  EL  +W  L  DI G+H  R    +L GMPV++E+RG+ ++H H+I TA+               +     AEG+ + +     EA+   +TP    +VP +F   L E+ +EL  +    L    C  +  P L +LL+       A+    T+    L       K+V+K L      R A+VV A++GE+ +S FLEAVLW   P +F  + +  C + K++E+ E  V+NF++Q  LQR +     + ++E +  +  +L+K  RR+GVLWR A AC+RL    K + KI++ + LA+             T  +  +A Q   A            K  R            G G  D RL+L+VPGAR+++  + F      +  V     +AV  LP + L A+A+DN+GSR +LDP+LE +        XXXXXXXXXXX                               +    +GH  ++A   V +H+L KCF   G+ ++ KR
Sbjct:   61 LMDNILEELKHQTASIMEDRQGSVVAEKMARRLSPLQLRTMLGRCRGYMLSLANNRYSSHVLQTLLSVAGQVVEDEISGXXXXXXXXXXXXXXXXXPGTAAVSDGSKKIDKMQDILL----SLVSELSGAWAELFADISGSHVGRGFLQVLGGMPVLSEKRGRQSRHAHSIGTAVGPARMGGRSNNXXXGNGSSVGAEGKSSASPAVDPEALEKWSTP-YKHRVPRSFVAALGEVTSELEALPASELQTLACGTFGCPLLVMLLRVHGNLATASSAAETMVLPCLEHESMAMKIVKKVLEWDDQERSAQVVYAISGENTASHFLEAVLW-LSPRSFFEELYHRCFESKLLEFCEHGVSNFLIQAALQRADDKALAEKMVEAISDNASELLK-ARRAGVLWRAAQACVRLRLKPKTQAKILQDIALAVQAGHTGSAPPPTPTDESNPKAEQDKAAASDSPPSIADAFKAARTWVPALLSPRLPGEGGLD-RLFLNVPGARIMQNALLF------DPPVAAPVLKAVAALPDDVLAAVARDNMGSRCLLDPILEAAGXXXXXXXXXXXXXXXXXXARRA---------------------------ILRAFKGHLVAMACDRVAWHILLKCFR--GVDMKEKR 658

[Close]

BLAST of NO06G02790 vs. NCBI_GenBank
Match: XP_024583017.1 (armadillo-like helical [Plasmopara halstedii] >CEG46648.1 armadillo-like helical [Plasmopara halstedii])

HSP 1 Score: 213.4 bits (542), Expect = 3.100e-51
Identity = 179/662 (27.04%), Postives = 304/662 (45.92%), Query Frame = 0

Query:   90 LLVSNLINELMFKVASLAMDRHAAPLLEKLARLCTRKQLARLLEGCLGYAASLASNRYSSHVLQTLLSLAGPMIEAEMRGXXXXXXXXXXXXXXXLDVDGEETTPKSPVTLCGSASKLAEELHDSWLSLIYDICGTHSMRALFCLLTGMPVVAERRGKNAKHQHAIETAIVLDFQHCAAEGRRAGNTGEAVNLHTTPLVMFQVPDTFSIVLDEMIAELGRIELMTLHQTLCDAYANPALCLLLQAVARKEGAARQELTLSPAGLFFNKVVQKALCTHTPSRCAEVVDAMAGESLSSRFLEAVLWHTDPSTFLVQFFEICMQGKVMEYAEDEVANFVLQTWLQRTESAKQIKVVLEELGPSFGKLVKEKRRSGVLWRLAGACLRLGKGEKKIVKALLLALGGKEGEEVKGEGTTLTAAVRAVQTLLALRIGQEDAGGGEKKGRGVGRDDGRLYLSVPGARLLECVMRF-PGREGGEMGVGWVFCQAVLELPSESLVAIAKDNVGSRTILDPLLELSSTATAAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLADHLADKLRGHFASLALHPVGYHVLTKCFTTGGLSLEGKRAIAQELMQAESRLAGCHFGRRALGVVGVSLFRGNRKKWEELQREGKKKKQVLDNLFEMLE 751
            LL+ N++ EL  + AS A DRHA  LLE      +  QL  LL    GY + L +NRYSSHVLQ +LS A  ++  EM G                ++D E    K    +      + +E+   W+SL+ D+  +H +R++F +L G P+VAE+RGK  KH+       V+ FQ    E   A +  E         V F VP TF+++ DE++A + +  +  L   L D  + P +  +L+    K                  K+ +  L  +    C     ++A ++++S  LE+ L+ +  + F  + FE C++GK+++ AE E+AN+V+Q  ++R         VLEEL PS   L+    R GV+WR+   C++    +K+I +AL+ A+  +E  + +      T     V +LL +++                    ++ L+V GA+++E + +F PG     +  G      +L   +  L+A+AKD+ GSR +++P+ E     TA                                         + + L  +  G F SLA+  +G   + KC+    +SLE K AI  EL+  E++L+G HF +  +    +  ++ NR+KW  L     K+++++D   +M+E
Sbjct:   53 LLLWNVLEELAPRAASAASDRHAGELLEVCLPRMSDAQLRFLLHKMAGYMSHLWTNRYSSHVLQNILSRASAVVANEMSGAEEDKD----------EIDDENDRMKEIPMMSDVIVNMVKEVKSEWISLMNDVSASHVLRSVFAVLAGKPLVAEKRGKKGKHR-------VVTFQ----EASPAKDGSE---------VTFDVPTTFNLMFDELLAMVIKCPIHDLQNLLYDQNSGPLIASVLKLAPSKSR---------------RKLAKHILHWNDEHLCESGFFSLAADAVTSHVLES-LFESASNKFFTKVFERCLRGKMLQLAEHEIANYVVQHAVRRIRIKAVAVHVLEELEPSLWTLL-TMGRPGVIWRVVEMCVQHKLRQKEIFEALVAAVIKQESRKPE------TVRKNFVASLLNVQL-------------STSATSAKVQLNVMGAKIIEQLQQFEPGAYLKPLYEG------ILSFNAVQLMALAKDSTGSRCVVEPIWESKDPNTA----------------------------------------WVREQLYQRFVGKFGSLAMDRLGAFSVMKCYE--DVSLEKKEAIVHELLAVETQLSGSHFSQLVINTCHLFDYKQNREKWVALY---TKQQKIVDLFKDMVE 597

[Close]

BLAST of NO06G02790 vs. NCBI_GenBank
Match: POM63867.1 (ARM repeat-containing protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 209.1 bits (531), Expect = 5.900e-50
Identity = 184/733 (25.10%), Postives = 317/733 (43.25%), Query Frame = 0

Query:   26 RPRRPDSETLTYLRSLEPLIDRSVAALLQRQQQEQGRGGCRGTVDGDDIQXXXXXXXXXXXXXXLLVSNLINELMFKVASLAMDRHAAPLLEKLARLCTRKQLARLLEGCLGYAASLASNRYSSHVLQTLLSLAGPMIEAEMRGXXXXXXXXXXXXXXXLDVDGEETTPKSPVTLCGSASKLAEELHDSWLSLIYDICGTHSMRALFCLLTGMPVVAERRGKNAKHQHAIETAIVLDFQHCAAEGRRAGNTGEAVNLHTTPLVMFQVPDTFSIVLDEMIAELGRIELMTLHQTLCDAYANPALCLLLQAVARKEGAARQELTLSPAGLFFNKVVQKALCTHTPSRCAEVVDAMAGESLSSRFLEAVLWHTDPSTFLVQFFEICMQGKVMEYAEDEVANFVLQTWLQRTESAKQIKVVLEELGPSFGKLVKEKRRSGVLWRLAGACLRLGKGEKKIVKALLLALGGKEGEEVKGEGTTLTAAVRAVQTLLALRIGQEDAGGGEKKGRGVGRDDGRLYLSVPGARLLECVMRFPGREGGEMGVGWVFCQAVLELPSESLVAIAKDNVGSRTILDPLLELSSTATAAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLADHLADKLRGHFASLALHPVGYHVLTKCFTTGGLSLEGKRAIAQELMQAESRLAGCHFGRRALGVVGVSLFRGNRKKWEELQREGKKKKQVLDNLFEMLEREVVVAGK 759
            RPRR + +TL+YL+ +  ++ ++                     D DD++              LL+ N++ EL  + AS A DRHA  LLE      +  QL  LL    GY + L +NRYSSHVLQ LLS A  ++  E+ G                D   EE  P S + +      + +E+ + W++L+ D+  +H +R++  +L G P+V E+RGK AKH+       V+ F        R G  G  V         + VPD+F  +  E++A L +     L   L D  + P +   L+    K                  K+ +  L       C      +AG+S++S  LEA L+ +    F  + FE C++GK++  AE  +AN+V+Q  +    +      VLEEL  S   L+    R GV+WR+   C++    +K++ +AL+ A+  +E ++ +       A++  VQ                           ++ ++V GA+++E + +F   E GE        + +L   S  L+A+AKD+ GSR +++P+ E    +TA                                         +   L ++  G F +LA+  +G   + KC+    L L+ K A+  EL++ E++L+G HF    +    +  ++ +R+KWE L     K+K++ D   ++++ E +  G+
Sbjct:   17 RPRRLEPDTLSYLKEVTEMLTQA-------------------GEDADDVE--------------LLLWNVLEELAPRAASAASDRHAGELLEVFLPKMSDAQLRFLLHKMAGYMSHLWTNRYSSHVLQHLLSRASVVVAKEVDGTEEVEE----------DERMEEIPPMSHIIV-----NVVKEVENEWITLMNDVSASHVLRSVLAVLAGKPLVPEKRGKKAKHR-------VVTFTEA-----RPGKDGSEVT--------YDVPDSFEKLFKELLAVLIQSSTQELQNLLYDQNSGPLIASALKLAPSKSR---------------RKLAEHILQWEDEESCENGFFDLAGDSVTSHLLEA-LFESASDKFFTKVFERCIRGKMLGLAEHNIANYVVQHAIMLVRTEALALEVLEELESSLWTLL-TMGRPGVIWRVVEMCVKFKLHQKEVFEALVNAVAKQESKKPEAVRKNFVASLLNVQL-------------------STSATSAKVQVNVMGAKIIEQMQQF---EAGEYLT--PLYKGILSFNSAQLMALAKDSTGSRCVIEPIWESKDQSTA----------------------------------------WVRGELYERFAGKFGTLAMDRLGAFSVMKCYE--DLPLDKKEAVVHELLEVEAQLSGSHFSELVMNTCHLFEYKQSREKWEALY---SKQKKIADLFRDVVKEEALEEGR 595

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BLAST of NO06G02790 vs. NCBI_GenBank
Match: POM75914.1 (ARM repeat-containing protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 208.4 bits (529), Expect = 1.000e-49
Identity = 188/733 (25.65%), Postives = 321/733 (43.79%), Query Frame = 0

Query:   26 RPRRPDSETLTYLRSLEPLIDRSVAALLQRQQQEQGRGGCRGTVDGDDIQXXXXXXXXXXXXXXLLVSNLINELMFKVASLAMDRHAAPLLEKLARLCTRKQLARLLEGCLGYAASLASNRYSSHVLQTLLSLAGPMIEAEMRGXXXXXXXXXXXXXXXLDVDGEETTPKSPVTLCGSASKLAEELHDSWLSLIYDICGTHSMRALFCLLTGMPVVAERRGKNAKHQHAIETAIVLDFQHCAAEGRRAGNTGEAVNLHTTPLVMFQVPDTFSIVLDEMIAELGRIELMTLHQTLCDAYANPALCLLLQAVARKEGAARQELTLSPAGLFFNKVVQKALCTHTPSRCAEVVDAMAGESLSSRFLEAVLWHTDPSTFLVQFFEICMQGKVMEYAEDEVANFVLQTWLQRTESAKQIKVVLEELGPSFGKLVKEKRRSGVLWRLAGACLRLGKGEKKIVKALLLALGGKEGEEVKGEGTTLTAAVRAVQTLLALRIGQEDAGGGEKKGRGVGRDDGRLYLSVPGARLLECVMRFPGREGGEMGVGWVFCQAVLELPSESLVAIAKDNVGSRTILDPLLELSSTATAAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLADHLADKLRGHFASLALHPVGYHVLTKCFTTGGLSLEGKRAIAQELMQAESRLAGCHFGRRALGVVGVSLFRGNRKKWEELQREGKKKKQVLDNLFEMLEREVVVAGK 759
            RPRR + +TL+YL+ +  ++ ++                     D DD++              LL+ N++ EL  + AS A DRHA  LLE      +  QL  LL    GY + L +NRYSSHVLQ LLS A  ++  E+ G   XXXXX            EE  P S + +      + +E+ + W++L+ D+  +H +R++  +L G P+V E+RGK AKH+       V+ F        R G  G  V         + VPD+F  +  E++A L +     L   L D  + P +   L+    K                  K+ +  L       C      +AG+S++S  LEA L+ +    F  + FE C++GK++  AE  +AN+V+Q  +    +      VLEEL  S   L+    R GV+WR+   C++    +K++ +AL+ A+  +E ++ +       A++  VQ                           ++ ++V GA+++E + +F   E GE        + +L   S  L+A+AKD+ GSR +++P+ E    +TA                                         +   L ++  G F +LA+  +G   + KC+    L L+ K A+  EL++ E++L+G HF    +    +  ++ +R+KWE L     K+K++ D   ++++ E +  G+
Sbjct:   17 RPRRLEPDTLSYLKEVTEMLTQA-------------------GEDADDVE--------------LLLWNVLEELAPRAASAASDRHAGELLEVFLPKMSDAQLRFLLHKMAGYMSHLWTNRYSSHVLQHLLSRASVVVAKEVDGTEEXXXXXRM----------EEIPPMSHIIV-----NVVKEVENEWITLMNDVSASHVLRSVLAVLAGKPLVPEKRGKKAKHR-------VVTFTEA-----RPGKDGSEVT--------YDVPDSFEKLFKELLAVLIQSSTQELQNLLYDQNSGPLIASALKLAPSKSR---------------RKLAEHILQWEDEESCENGFFDLAGDSVTSHLLEA-LFESASDKFFTKVFERCIRGKMLGLAEHNIANYVVQHAIMLVRTEALALEVLEELESSLWTLL-TMGRPGVIWRVVEMCVKFKLHQKEVFEALVNAVAKQESKKPEAVRKNFVASLLNVQL-------------------STSATSAKVQVNVMGAKIIEQMQQF---EAGEYLT--PLYKGILSFNSAQLMALAKDSTGSRCVIEPIWESKDQSTA----------------------------------------WVRGELYERFAGKFGTLAMDRLGAFSVMKCYE--DLPLDKKEAVVHELLEVEAQLSGSHFSELVMNTCHLFEYKQSREKWEALY---SKQKKIADLFRDVVKEEALEEGR 595

[Close]

BLAST of NO06G02790 vs. NCBI_GenBank
Match: XP_012209049.1 (hypothetical protein SPRG_14482 [Saprolegnia parasitica CBS 223.65] >KDO20236.1 hypothetical protein SPRG_14482 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 204.5 bits (519), Expect = 1.500e-48
Identity = 181/722 (25.07%), Postives = 315/722 (43.63%), Query Frame = 0

Query:   26 RPRRPDSETLTYLRSLEPLIDRSVAALLQRQQQEQGRGGCRGTVDGDDIQXXXXXXXXXXXXXXLLVSNLINELMFKVASLAMDRHAAPLLEKLARLCTRKQLARLLEGCLGYAASLASNRYSSHVLQTLLSLAGPMIEAEMRGXXXXXXXXXXXXXXXLDVDGEETTPKSPVTLCGSASKLAEELHDSWLSLIYDICGTHSMRALFCLLTGMPVVAERRGKNAKHQHAIETAIVLDFQHCAAEGRRAGNTGEAVNLHTTPLVMFQVPDTFSIVLDEMIAELGRIELMTLHQTLCDAYANPALCLLLQAVARKEGAARQELTLSPAGLFFNKVVQKALCTHTPSRCAEVVDAMAGESLSSRFLEAVLWHTDPSTFLVQFFEICMQGKVMEYAEDEVANFVLQTWLQRTESAKQIKVVLEELGPSFGKLVKEKRRSGVLWRLAGACLRLGKGEKKIVKALLLALGGKEGEEVKGEGTTLTAAVR--AVQTLLALRIGQEDAGGGEKKGRGVGRDDGRLYLSVPGARLLECVMRFPGREGGEMGVGWVFCQAVLELPSESLVAIAKDNVGSRTILDPLLELSSTATAAMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLADHLADKLRGHFASLALHPVGYHVLTKCFTTGGLSLEGKRAIAQELMQAESRLAGCHFGRRALGVVGVSLFRGNRKKWEELQREGKKKKQVLDNL 746
            RPRR + +T  YL  ++  +  S+                    DGDD +              +L+ N++ EL  ++AS A DRHA  ++E L    + +QL+  +    GY + L +NRYSSHVLQ +LS  G +++AE+ G                  + ++   K+  T+      +  E+ D W++L+ D+  +H +R + C L G   VAE+RGK  KH         + F++   +     +  E +N      V + VP TF+  L +++  +       L + + D +A P L +   AV     A RQ+L          +  +K    +            AG++++S FLEA L  T         F+ CMQ +++E++E  ++N+V+Q ++    +A   ++VL+E+  +   L+    R GV+WRLA  C+R     ++   +L  A+  +E ++         AAV+   V  L+AL +                  + +L L+V GAR++E +++FP        +     +++L L +  LVA++KD+VGSR +++P+    +                                            +    L +K +G F +LA+   G   + KCF T  +SLE K  IA+EL   +++L G HF    L    V  F+ N +KW       +K K++  +L
Sbjct:   15 RPRRLEPDTTAYLLEVKTSLLESLGD------------------DGDDTK-------------SILLWNVLEELAPRIASAASDRHACEIVEVLVEHMSPRQLSFFVHKMEGYYSHLWTNRYSSHVLQRILSKVGAIVQAEVDGSLE-------------TTEDDDERSKNVPTMATLIVAMCTEVKDEWITLVDDVSASHVLRGVLCALAGRAPVAEKRGKKGKHG-------AVKFENLPKK-----SDDEKLN-----AVQYTVPATFTSTLTDIVEVMMDAPDHKLAELMFDHHAGPFLSI---AVRVCPDALRQDLVFRLLNWDDEESSKKRFYDY------------AGDTVASHFLEA-LCQTASEDLWTSVFDRCMQSRLLEFSEHAISNYVVQNFISHVPTAAYAEIVLDEMKDALWTLL-SMHRPGVIWRLAECCVRFKLHFERFFNSLTAAVAKQESKK--------PAAVQKDVVPALIALELSNS--------------QNAKLSLNVAGARIVETLLQFPA------SITAPLVKSILGLNALQLVALSKDSVGSRCLVEPIWNSEN-------------------------------------------DEAKIELFNKFKGQFGTLAMDRNGAFSVIKCFNT--MSLEYKTMIAEELSFMDAKLVGNHFASMVLTNCNVHEFKTNEEKWRSTYERKRKVKELFSDL 585

The following BLAST results are available for this feature:

BLAST of NO06G02790 vs. NCBI_GenBank

BLAST of NO06G02790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM26276.1	2.100e-220	49.95	Armadillo-like helical [Nannochloropsis gaditana]	[more]
XP_005852766.1	1.700e-126	54.09	hypothetical protein NGA_2079800, partial [Nannoch...	[more]
XP_005852764.1	4.400e-69	55.84	rrna processing protein, partial [Nannochloropsis ...	[more]
XP_009841102.1	2.900e-57	29.79	hypothetical protein, variant [Aphanomyces astaci]...	[more]
XP_008874672.1	1.900e-56	30.53	hypothetical protein H310_10170 [Aphanomyces invad...	[more]
CBN78788.1	1.200e-55	33.54	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_024583017.1	3.100e-51	27.04	armadillo-like helical [Plasmopara halstedii] >CEG...	[more]
POM63867.1	5.900e-50	25.10	ARM repeat-containing protein [Phytophthora palmiv...	[more]
POM75914.1	1.000e-49	25.65	ARM repeat-containing protein [Phytophthora palmiv...	[more]
XP_012209049.1	1.500e-48	25.07	hypothetical protein SPRG_14482 [Saprolegnia paras...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL091	nonsL091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR028	ncniR028	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR147	ngnoR147	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000178	NSK000178	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO06G02790.1	NO06G02790.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|122881	gene_6605	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100073g21	gene4235	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO06G02790.1	NO06G02790.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO06G02790 ID=NO06G02790|Name=NO06G02790|organism=Nannochloropsis oceanica|type=gene|length=3058bp
ACAGGCCTCGTCTTTTGCCCTTGCTTTCCAGGAAAGTATTGTATCCTTGG
CCATTTACCCCCACCGACCTCCCCCATCTCCATCCCATGCGGGATCAAGT
GCCTGACAACCACGAGGCCAATGGCGCGATGGCGACGGATGGGACCTCTC
ACGGCCCTGCGCGGCCTCGGCGGCCCGACAGCGAGACGCTGACATACCTG
CGCTCATTGGAGCCTTTGATCGACAGAAGCGTGGCGGCCCTGCTCCAGCG
GCAGCAGCAAGAACAAGGCCGAGGAGGATGTAGGGGCACAGTGGATGGAG
ACGATATCCAACAACCGACGGAGGAAGACGAAGAGGAAGCGGAGGAACGG
GCCTTGCTGGTGAGCAACTTGATCAACGAACTGATGTTCAAGGTGGCCAG
CTTGGCCATGGACAGGCACGCGGCGCCGTTGCTGGAAAAACTGGCTCGTC
TGTGTACGCGCAAGCAGCTCGCACGTCTTTTAGAGGGTTGCTTAGGGTAT
GCGGCTAGCTTGGCGAGTAATCGATACTCTTCGCATGTGCTGCAGACGCT
CTTGTCATTGGCGGGGCCTATGATTGAGGCAGAGATGCGTGGGGAGGACG
AGGACGAGGGGGAGGACGAGGACGCCGACGCCCCTGTGCTTGATGTGGAC
GGCGAGGAAACTACCCCCAAAAGCCCCGTGACATTATGTGGCTCAGCAAG
TAAATTGGCGGAGGAGTTGCACGATTCGTGGTTGTCCTTGATTTACGATA
TCTGTGGGACTCACAGCATGCGAGCTCTTTTCTGTCTGTTGACGGGTATG
CCGGTCGTGGCCGAACGCAGGGGAAAAAACGCCAAGCACCAGCATGCGAT
CGAGACGGCAATTGTTTTGGATTTCCAACATTGTGCCGCGGAAGGACGGA
GGGCGGGGAACACAGGCGAAGCTGTAAATCTCCACACGACCCCCCTAGTC
ATGTTTCAAGTGCCTGATACTTTCTCCATCGTTTTGGATGAAATGATCGC
CGAATTGGGCAGAATAGAGCTCATGACTTTGCATCAAACGCTTTGCGATG
CCTATGCCAATCCTGCTCTATGCTTGCTCCTTCAAGCAGTGGCTCGAAAG
GAAGGTGCGGCGCGACAAGAATTGACTCTCTCCCCCGCTGGCCTCTTTTT
CAACAAAGTGGTTCAAAAAGCCCTGTGCACACACACACCCTCCCGATGCG
CCGAAGTCGTTGATGCCATGGCCGGTGAGAGCCTGAGCAGCCGCTTTCTA
GAAGCCGTGCTCTGGCATACCGATCCAAGCACGTTCCTCGTGCAATTTTT
TGAGATATGCATGCAGGGGAAGGTGATGGAATATGCCGAAGATGAGGTGG
CGAATTTTGTCCTTCAAACATGGTTGCAACGGACAGAAAGTGCTAAACAA
ATCAAGGTGGTTTTGGAGGAACTAGGACCGTCTTTTGGTAAGCTGGTGAA
GGAAAAACGAAGGTCGGGGGTGTTGTGGCGCTTGGCGGGGGCATGTCTAA
GGCTGGGAAAGGGGGAGAAAAAGATTGTCAAGGCCTTATTGCTTGCATTG
GGTGGGAAAGAGGGAGAGGAGGTGAAGGGGGAAGGGACAACTTTAACGGC
TGCTGTACGGGCGGTGCAGACACTGCTGGCTTTGAGAATAGGCCAAGAAG
ATGCAGGGGGAGGGGAGAAGAAAGGACGCGGCGTTGGTAGAGATGATGGT
CGCCTGTATTTGAGTGTGCCGGGGGCACGGCTGCTTGAGTGTGTCATGCG
GTTCCCGGGTCGGGAAGGGGGAGAAATGGGAGTTGGATGGGTGTTTTGTC
AGGCCGTGTTAGAATTACCTTCCGAGAGTCTCGTCGCGATTGCGAAAGAC
AATGTGGGAAGTCGTACGATTCTTGACCCGCTCTTGGAGCTCTCGTCTAC
AGCGACTGCAGCGATGACAGAGGCAACAGCTACGGCTGGGGACACCAAGA
AGAGAAAGGAGAATGGTTGTGGTAAGAATTGCAGCGGCAGTGGCGGCGGT
AGCAGCAGCAGCGGCCGCAGCAGTACCAGTCAATTGGCGGATCATTTGGC
AGACAAATTACGCGGGCATTTTGCGTCATTAGCGCTGCATCCTGTTGGAT
ACCATGTGTTGACTAAATGCTTCACTACTGGTGGGTTGAGCTTAGAAGGG
AAACGTGCGATCGCTCAGGAACTGATGCAAGCGGAAAGCAGACTTGCTGG
CTGTCATTTCGGCCGAAGGGCTTTGGGTGTGGTAGGGGTGAGTTTGTTCA
GAGGGAATAGGAAGAAGTGGGAGGAACTGCAGAGGGAGGGGAAGAAGAAG
AAGCAGGTGTTGGACAATTTGTTTGAAATGCTGGAGAGGGAGGTAGTGGT
GGCTGGAAAGGGGCAAAGGAAGCGGCAAGTGAAGGAAGGAGACAAGGAAG
AGGGGGAGGGAGGGAAGATGAGGAGTCCTTCGTACGAAAAGGAAGGCAAG
GATGGTGAGTCATTTTTGGACCTTCTGATGGGAAATAAGCAGGGTAAGAA
GGAGACGGAGAAAAAGAAGGAGGAAGAGGGACGAGAGGAGGAAGAGGGTG
GTGGGGATTTGGGTTTTGTGCTGGAGGCGATTAAGCGAAGCGGCTGTGGC
AGTGAGACACTAAGACGGTCTGCTCTAGACAACGGTTACGGGCGTAAGAG
GAAGATCAGTCGTGGCGCCAGCTCCGAGGAGCAGGAGCGGGCACTGCCAC
GACGAAGGAAAGATGTGCCAGCTGCCAATGCTGCTCCTTCCTCGGCTGTT
CCCAAGCCCAAGAAGAAGTACCGACACGACAACGACTCAAAGCATGCACG
GGGGACGGCGGTGGAAAAGGCTCAGCGCCTATTGGGGACGCGGACGATGA
TGAGCAAGAGCGAGCTCCTCACGGCCGTGGAGGACTTGGAGCGAGACGTC
AAGGGGGGGAGAAACGGTGGCGGCAGTCGCAACGATGCGCCCGAGGTTGT
GAAGACCGAGAAAAAGAGTAGTAGCAAGACATGACGAAAGCAAGTATATG
TGTTTGTGTAAAAGTAAATTACAAGAACGAGGAACAAAATTTAAAAAACC
AAAAAGCA

protein sequence of NO06G02790.1

>NO06G02790.1-protein ID=NO06G02790.1-protein|Name=NO06G02790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=966bp
MRDQVPDNHEANGAMATDGTSHGPARPRRPDSETLTYLRSLEPLIDRSVA
ALLQRQQQEQGRGGCRGTVDGDDIQQPTEEDEEEAEERALLVSNLINELM
FKVASLAMDRHAAPLLEKLARLCTRKQLARLLEGCLGYAASLASNRYSSH
VLQTLLSLAGPMIEAEMRGEDEDEGEDEDADAPVLDVDGEETTPKSPVTL
CGSASKLAEELHDSWLSLIYDICGTHSMRALFCLLTGMPVVAERRGKNAK
HQHAIETAIVLDFQHCAAEGRRAGNTGEAVNLHTTPLVMFQVPDTFSIVL
DEMIAELGRIELMTLHQTLCDAYANPALCLLLQAVARKEGAARQELTLSP
AGLFFNKVVQKALCTHTPSRCAEVVDAMAGESLSSRFLEAVLWHTDPSTF
LVQFFEICMQGKVMEYAEDEVANFVLQTWLQRTESAKQIKVVLEELGPSF
GKLVKEKRRSGVLWRLAGACLRLGKGEKKIVKALLLALGGKEGEEVKGEG
TTLTAAVRAVQTLLALRIGQEDAGGGEKKGRGVGRDDGRLYLSVPGARLL
ECVMRFPGREGGEMGVGWVFCQAVLELPSESLVAIAKDNVGSRTILDPLL
ELSSTATAAMTEATATAGDTKKRKENGCGKNCSGSGGGSSSSGRSSTSQL
ADHLADKLRGHFASLALHPVGYHVLTKCFTTGGLSLEGKRAIAQELMQAE
SRLAGCHFGRRALGVVGVSLFRGNRKKWEELQREGKKKKQVLDNLFEMLE
REVVVAGKGQRKRQVKEGDKEEGEGGKMRSPSYEKEGKDGESFLDLLMGN
KQGKKETEKKKEEEGREEEEGGGDLGFVLEAIKRSGCGSETLRRSALDNG
YGRKRKISRGASSEEQERALPRRRKDVPAANAAPSSAVPKPKKKYRHDND
SKHARGTAVEKAQRLLGTRTMMSKSELLTAVEDLERDVKGGRNGGGSRND
APEVVKTEKKSSSKT*

Synonyms

Publications