NO06G02690, NO06G02690 (gene) Nannochloropsis oceanica

Overview
NameNO06G02690
Unique NameNO06G02690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1341
Alignment locationchr6:760505..761845 +

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Properties
Property NameValue
Description3-oxoacyl-ACP reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:760505..761845 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Homology
[Close]
BLAST of NO06G02690 vs. NCBI_GenBank
Match: XP_005855154.1 (3-oxoacyl-ACP reductase, partial [Nannochloropsis gaditana CCMP526] >EKU21204.1 3-oxoacyl-ACP reductase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 447.6 bits (1150), Expect = 3.100e-122
Identity = 222/263 (84.41%), Postives = 250/263 (95.06%), Query Frame = 0 
Query:   37 MALSMKGSRRALITGAGSGIGEGIAISLAIEHGWEIIATDLNFEAAQGTAAQIKARGGEAEAYALNVADNSQITALVEELKAGRKRIDVLVNNAGLQHVARLEDFPSEKWGFMIQVMLTGVADLTRSILPIMRKQGFGRIVNIGSIHSVIASPYKSAYVAAKHGLIGFSKVMALETSDVDVTINTICPSYVKTPLVDSQIANQAKTHGISEEDVINKIMLEPMPKKAFISMEELVGTTVFLSSNAARNMTGQALVLDGGWTVR 300
            M LS++GSRRA ITGAGSGIG GIA SLA+EHGWE+IATD+N EAAQGTAAQIKA+ G+AEAYALNVADN+QI +L+E+LK   K +DVL+NNAGLQHVARLEDFP+EKWGFMIQVMLTGVADLTR+ILP+M +QGFGRIVNIGSIHSVIASP+KSAYVAAKHGLIGFSKV+ALETSDVD+TINTICPSYVKTPLVD+QIANQAKTHGISE++VINKIMLEPMPKKAFIS++ELVGTT+FL+S+AARNMTGQ LVLDGGWTVR
Sbjct:   14 MELSLQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 276
[Close]
BLAST of NO06G02690 vs. NCBI_GenBank
Match: EWM26283.1 (3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 447.6 bits (1150), Expect = 3.100e-122
Identity = 222/263 (84.41%), Postives = 250/263 (95.06%), Query Frame = 0 
Query:   37 MALSMKGSRRALITGAGSGIGEGIAISLAIEHGWEIIATDLNFEAAQGTAAQIKARGGEAEAYALNVADNSQITALVEELKAGRKRIDVLVNNAGLQHVARLEDFPSEKWGFMIQVMLTGVADLTRSILPIMRKQGFGRIVNIGSIHSVIASPYKSAYVAAKHGLIGFSKVMALETSDVDVTINTICPSYVKTPLVDSQIANQAKTHGISEEDVINKIMLEPMPKKAFISMEELVGTTVFLSSNAARNMTGQALVLDGGWTVR 300
            M LS++GSRRA ITGAGSGIG GIA SLA+EHGWE+IATD+N EAAQGTAAQIKA+ G+AEAYALNVADN+QI +L+E+LK   K +DVL+NNAGLQHVARLEDFP+EKWGFMIQVMLTGVADLTR+ILP+M +QGFGRIVNIGSIHSVIASP+KSAYVAAKHGLIGFSKV+ALETSDVD+TINTICPSYVKTPLVD+QIANQAKTHGISE++VINKIMLEPMPKKAFIS++ELVGTT+FL+S+AARNMTGQ LVLDGGWTVR
Sbjct:    1 MELSLQGSRRAFITGAGSGIGAGIASSLALEHGWEVIATDVNLEAAQGTAAQIKAKDGKAEAYALNVADNTQIVSLIEQLKREGKNVDVLINNAGLQHVARLEDFPAEKWGFMIQVMLTGVADLTRAILPMMHEQGFGRIVNIGSIHSVIASPFKSAYVAAKHGLIGFSKVIALETSDVDITINTICPSYVKTPLVDAQIANQAKTHGISEDEVINKIMLEPMPKKAFISIQELVGTTLFLTSDAARNMTGQTLVLDGGWTVR 263
[Close]
BLAST of NO06G02690 vs. NCBI_GenBank
Match: WP_093299323.1 (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. CF385] >SDQ84623.1 3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. CF385])

HSP 1 Score: 334.3 bits (856), Expect = 3.800e-88
Identity = 170/259 (65.64%), Postives = 208/259 (80.31%), Query Frame = 0 
Query:   41 MKGSRRALITGAGSGIGEGIAISLAIEHGWEIIATDLNFEAAQGTAAQIKARGGEAEAYALNVADNSQITALVEELKAGRKRIDVLVNNAGLQHVARLEDFPSEKWGFMIQVMLTGVADLTRSILPIMRKQGFGRIVNIGSIHSVIASPYKSAYVAAKHGLIGFSKVMALETSDVDVTINTICPSYVKTPLVDSQIANQAKTHGISEEDVINKIMLEPMPKKAFISMEELVGTTVFLSSNAARNMTGQALVLDGGWTVR 300
            M+ +   LITGA SGIG GIA  LA E G  +I +DLN +AA+  AAQI+A GG AEA AL+V     I A    L A  + IDVLVNNAGLQHV+ LEDFP EKW F++QVML GVA LTR++LP MR++GFGRIVNIGSIH+++ASPYKSAYVAAKHGL+GFSKV+ALET+D D+TINT+CPSYVKTPLVD QIA+QA+T GISE DV++++ML+PMPK  FI ++EL G T FL+S AARN+TGQ +V+DGGWTV+
Sbjct:    1 MQNTHTLLITGAASGIGAGIAAQLA-EAGRHVIVSDLNLDAAEAVAAQIRAAGGSAEAVALDVTSQDSIDA---ALAAVSRPIDVLVNNAGLQHVSPLEDFPIEKWDFLVQVMLVGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVLALETADTDITINTVCPSYVKTPLVDKQIADQARTRGISEADVVSQVMLKPMPKGVFIGLDELAGITAFLTSPAARNITGQTIVVDGGWTVQ 255
[Close]
BLAST of NO06G02690 vs. NCBI_GenBank
Match: WP_097122401.1 (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas wuyuanensis] >SOD55136.1 3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas wuyuanensis])

HSP 1 Score: 333.2 bits (853), Expect = 8.400e-88
Identity = 173/259 (66.80%), Postives = 207/259 (79.92%), Query Frame = 0 
Query:   41 MKGSRRALITGAGSGIGEGIAISLAIEHGWEIIATDLNFEAAQGTAAQIKARGGEAEAYALNVADNSQITALVEELKAGRKRIDVLVNNAGLQHVARLEDFPSEKWGFMIQVMLTGVADLTRSILPIMRKQGFGRIVNIGSIHSVIASPYKSAYVAAKHGLIGFSKVMALETSDVDVTINTICPSYVKTPLVDSQIANQAKTHGISEEDVINKIMLEPMPKKAFISMEELVGTTVFLSSNAARNMTGQALVLDGGWTVR 300
            M+ +   LITGA SGIG GIA  LA E G  II +DLN EAA+  A +I+A GG AEA  L+V  ++ + A    L A  + +DVLVNNAGLQHV+ LEDFP EKW F+IQVML GVA LTR++LP MR++GFGRIVNIGSIH+++ASPYKSAYVAAKHGL+GFSKV+ALET+D D+TINT+CPSYVKTPLVD QIA+QA+T GI E +VIN+IML+PMPK  FI ++EL G T FLSS AARNMTGQ LVLDGGWTV+
Sbjct:    1 MQQTHTYLITGAASGIGAGIAAQLA-EAGRHIIVSDLNLEAAEAVAEKIRADGGSAEAVVLDVTSDASVAA---ALAAISRPVDVLVNNAGLQHVSPLEDFPIEKWDFLIQVMLVGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVIALETADTDITINTVCPSYVKTPLVDKQIADQARTRGIPEAEVINQIMLKPMPKGVFIEIDELAGVTAFLSSPAARNMTGQTLVLDGGWTVQ 255
[Close]
BLAST of NO06G02690 vs. NCBI_GenBank
Match: WP_055943913.1 (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. Root65] >KRA51009.1 3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. Root65])

HSP 1 Score: 332.8 bits (852), Expect = 1.100e-87
Identity = 168/259 (64.86%), Postives = 207/259 (79.92%), Query Frame = 0 
Query:   41 MKGSRRALITGAGSGIGEGIAISLAIEHGWEIIATDLNFEAAQGTAAQIKARGGEAEAYALNVADNSQITALVEELKAGRKRIDVLVNNAGLQHVARLEDFPSEKWGFMIQVMLTGVADLTRSILPIMRKQGFGRIVNIGSIHSVIASPYKSAYVAAKHGLIGFSKVMALETSDVDVTINTICPSYVKTPLVDSQIANQAKTHGISEEDVINKIMLEPMPKKAFISMEELVGTTVFLSSNAARNMTGQALVLDGGWTVR 300
            M+ +   LITGA SGIG GIA  LA E G  +I +DLNFEAA+  A QI+  GG AEA AL+V     I A +  +    + IDVLVNNAGLQHV+ LEDFP EKW F++QVML GVA LTR++LP MR++GFGRIVNIGSIH+++ASPYKSAYVAAKHGL+GFSKV+ALET+D D+TINT+CPSYVKTPLVD QIA+QA+T GISE DV++++ML+PMPK  FI ++EL G T FL+S AARN+TGQ +V+DGGWTV+
Sbjct:    1 MQPTHTLLITGAASGIGAGIAAQLA-EAGRHVIVSDLNFEAAEAVATQIRTEGGSAEAVALDVTSQDSIEAALATIS---RPIDVLVNNAGLQHVSPLEDFPIEKWDFLVQVMLVGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVLALETADTDITINTVCPSYVKTPLVDKQIADQARTRGISEVDVVSQVMLKPMPKGVFIGLDELAGITAFLTSPAARNITGQTIVVDGGWTVQ 255
[Close]
BLAST of NO06G02690 vs. NCBI_GenBank
Match: WP_093490649.1 (MULTISPECIES: 3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas] >SFV36357.1 3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. YR558] >PPJ43835.1 3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. KAs_5_3])

HSP 1 Score: 332.0 bits (850), Expect = 1.900e-87
Identity = 170/259 (65.64%), Postives = 207/259 (79.92%), Query Frame = 0 
Query:   41 MKGSRRALITGAGSGIGEGIAISLAIEHGWEIIATDLNFEAAQGTAAQIKARGGEAEAYALNVADNSQITALVEELKAGRKRIDVLVNNAGLQHVARLEDFPSEKWGFMIQVMLTGVADLTRSILPIMRKQGFGRIVNIGSIHSVIASPYKSAYVAAKHGLIGFSKVMALETSDVDVTINTICPSYVKTPLVDSQIANQAKTHGISEEDVINKIMLEPMPKKAFISMEELVGTTVFLSSNAARNMTGQALVLDGGWTVR 300
            M+ +   LITGA SGIG GIA  LA E G  +I +DLN  AA+  AAQI+A GG AEA AL+V     I A    L A  + IDVLVNNAGLQHV+ LEDFP EKW F++QVML GVA LTR++LP MR++GFGRIVNIGSIH+++ASPYKSAYVAAKHGL+GFSKV+ALET+D D+TINT+CPSYVKTPLVD QIA+QA+T GISE DV++++ML+PMPK  FI ++EL G T FL+S AARN+TGQ +V+DGGWTV+
Sbjct:    1 MQKTHTLLITGAASGIGAGIAAQLA-EAGRHVIVSDLNLAAAEAVAAQIRADGGSAEAVALDVTSQDSIDA---ALAAVSRPIDVLVNNAGLQHVSPLEDFPIEKWDFLVQVMLVGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVLALETADTDITINTVCPSYVKTPLVDKQIADQARTRGISEADVVSQVMLKPMPKGVFIGLDELAGITAFLTSPAARNITGQTIVVDGGWTVQ 255
[Close]
BLAST of NO06G02690 vs. NCBI_GenBank
Match: WP_056881238.1 (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. Root630] >KRA42445.1 3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas sp. Root630])

HSP 1 Score: 330.5 bits (846), Expect = 5.500e-87
Identity = 167/259 (64.48%), Postives = 207/259 (79.92%), Query Frame = 0 
Query:   41 MKGSRRALITGAGSGIGEGIAISLAIEHGWEIIATDLNFEAAQGTAAQIKARGGEAEAYALNVADNSQITALVEELKAGRKRIDVLVNNAGLQHVARLEDFPSEKWGFMIQVMLTGVADLTRSILPIMRKQGFGRIVNIGSIHSVIASPYKSAYVAAKHGLIGFSKVMALETSDVDVTINTICPSYVKTPLVDSQIANQAKTHGISEEDVINKIMLEPMPKKAFISMEELVGTTVFLSSNAARNMTGQALVLDGGWTVR 300
            M+ +   LITGA SGIG GIA  LA E G  +I +DLN +AA+  A QI+A GG AEA AL+V     I A +  +    + IDVLVNNAGLQHV+ LEDFP EKW F++QVML GVA LTR++LP MR++GFGRIVNIGSIH+++ASPYKSAYVAAKHGL+GFSKV+ALET+D D+TINT+CPSYVKTPLVD QIA+QA+T GISE DV++++ML+PMPK  FI ++EL G T FL+S AARN+TGQ +V+DGGWTV+
Sbjct:    1 MQPTHTLLITGAASGIGAGIAAQLA-EAGRHVIVSDLNLDAAEAVATQIRADGGSAEAVALDVTSQDSIDAALATIS---RPIDVLVNNAGLQHVSPLEDFPIEKWDFLVQVMLVGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVLALETADTDITINTVCPSYVKTPLVDKQIADQARTRGISEADVVSQVMLKPMPKGVFIGLDELAGITAFLTSPAARNITGQTIVVDGGWTVQ 255
[Close]
BLAST of NO06G02690 vs. NCBI_GenBank
Match: WP_024869540.1 (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas suwonensis])

HSP 1 Score: 329.7 bits (844), Expect = 9.300e-87
Identity = 167/255 (65.49%), Postives = 204/255 (80.00%), Query Frame = 0 
Query:   45 RRALITGAGSGIGEGIAISLAIEHGWEIIATDLNFEAAQGTAAQIKARGGEAEAYALNVADNSQITALVEELKAGRKRIDVLVNNAGLQHVARLEDFPSEKWGFMIQVMLTGVADLTRSILPIMRKQGFGRIVNIGSIHSVIASPYKSAYVAAKHGLIGFSKVMALETSDVDVTINTICPSYVKTPLVDSQIANQAKTHGISEEDVINKIMLEPMPKKAFISMEELVGTTVFLSSNAARNMTGQALVLDGGWTVR 300
            R  LITGA SGIG GIA  LA   G  +I +DL+ + A+  AA I+ +GG AEA AL+V  +  + A    L A  + +DVLVNNAGLQHV+ LE+FP  KW F++QVMLTGVA LTR++LP MR++GFGRIVNIGSIH+++ASPYKSAYVAAKHGL+GFSKV+ALET D D+TINT+CPSYVKTPLVD QIA+QA+T GISE DV++++ML+PMPK  FI M+EL GTT FL S+AARNMTGQ LVLDGGWTV+
Sbjct:    2 RSILITGAASGIGAGIAHELAAA-GHHVIVSDLSLDGAEAVAADIRGKGGSAEAVALDVTSDESVAA---ALAAVSRPVDVLVNNAGLQHVSPLEEFPIAKWDFLVQVMLTGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVIALETGDTDITINTVCPSYVKTPLVDKQIADQARTRGISESDVVSQVMLKPMPKGVFIEMDELAGTTAFLISHAARNMTGQTLVLDGGWTVQ 252
[Close]
BLAST of NO06G02690 vs. NCBI_GenBank
Match: WP_062356574.1 (3-hydroxybutyrate dehydrogenase [Pseudoxanthomonas mexicana])

HSP 1 Score: 329.3 bits (843), Expect = 1.200e-86
Identity = 165/259 (63.71%), Postives = 207/259 (79.92%), Query Frame = 0 
Query:   41 MKGSRRALITGAGSGIGEGIAISLAIEHGWEIIATDLNFEAAQGTAAQIKARGGEAEAYALNVADNSQITALVEELKAGRKRIDVLVNNAGLQHVARLEDFPSEKWGFMIQVMLTGVADLTRSILPIMRKQGFGRIVNIGSIHSVIASPYKSAYVAAKHGLIGFSKVMALETSDVDVTINTICPSYVKTPLVDSQIANQAKTHGISEEDVINKIMLEPMPKKAFISMEELVGTTVFLSSNAARNMTGQALVLDGGWTVR 300
            M+ +   L+TGA SGIG GIA  LA E G  +I +DLN +AA   A QI++ GG AEA AL+V   + I A +  +    + IDVLVNNAGLQHV+ LEDFP EKW F++QVML GVA LTR++LP MR++GFGRIVNIGSIH+++ASPYKSAYVAAKHGL+GFSKV+ALET+D D+TINT+CPSYVKTPLVD QIA+QA+T GISE DV++++ML+PMPK  FI ++EL G T FL+S AARN+TGQ +V+DGGWTV+
Sbjct:    1 MQPTHTVLVTGAASGIGAGIAAQLA-EAGRHVIVSDLNLDAAAAVATQIRSEGGSAEAVALDVTSQASIDAALATIS---RPIDVLVNNAGLQHVSPLEDFPIEKWDFLVQVMLVGVARLTRAVLPGMRERGFGRIVNIGSIHALVASPYKSAYVAAKHGLVGFSKVLALETADTDITINTVCPSYVKTPLVDKQIADQARTRGISEADVVSQVMLKPMPKGVFIGLDELAGITAFLTSPAARNITGQTIVVDGGWTVQ 255
[Close]
BLAST of NO06G02690 vs. NCBI_GenBank
Match: WP_049726228.1 (3-hydroxybutyrate dehydrogenase [Wenzhouxiangella marina] >AKS42685.1 3-hydroxybutyrate dehydrogenase [Wenzhouxiangella marina])

HSP 1 Score: 328.9 bits (842), Expect = 1.600e-86
Identity = 171/259 (66.02%), Postives = 209/259 (80.69%), Query Frame = 0 
Query:   41 MKGSRRALITGAGSGIGEGIAISLAIEHGWEIIATDLNFEAAQGTAAQIKARGGEAEAYALNVADNSQITALVEELKAGRKRIDVLVNNAGLQHVARLEDFPSEKWGFMIQVMLTGVADLTRSILPIMRKQGFGRIVNIGSIHSVIASPYKSAYVAAKHGLIGFSKVMALETSDVDVTINTICPSYVKTPLVDSQIANQAKTHGISEEDVINKIMLEPMPKKAFISMEELVGTTVFLSSNAARNMTGQALVLDGGWTVR 300
            M  +   LITGAGSGIG GIA  LA   G  +I TDL+  AA+ TA +I+A GG+A A AL+V+  + I ALVE L A    +DVLVNNAGLQHVARLEDFP EKW  +IQVML GVA L+R++LP MR++GFGRIVNIGSIHS++ASP+KSAYVAAKHGLIGFSKV+ALET+D D+TINT+CP+YVKTPLV+ QIA+QA+ HG+SE++V+ +IML+PMPK  FIS EEL G T FL   AARN+TGQA+V+DGGWTV+
Sbjct:    1 MSQTLNILITGAGSGIGAGIACELA-GQGHALIVTDLDTSAAEATARRIQAAGGQATAAALDVSSEASIDALVEGLPA---PVDVLVNNAGLQHVARLEDFPMEKWDQLIQVMLVGVARLSRALLPGMRERGFGRIVNIGSIHSLVASPFKSAYVAAKHGLIGFSKVIALETADCDITINTVCPTYVKTPLVEKQIADQARNHGLSEDEVVEQIMLKPMPKGVFISFEELAGITAFLIGPAARNITGQAIVVDGGWTVQ 255
The following BLAST results are available for this feature:
BLAST of NO06G02690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855154.13.100e-12284.413-oxoacyl-ACP reductase, partial [Nannochloropsis ... [more]
EWM26283.13.100e-12284.413-hydroxybutyrate dehydrogenase [Nannochloropsis g... [more]
WP_093299323.13.800e-8865.643-hydroxybutyrate dehydrogenase [Pseudoxanthomonas... [more]
WP_097122401.18.400e-8866.803-hydroxybutyrate dehydrogenase [Pseudoxanthomonas... [more]
WP_055943913.11.100e-8764.863-hydroxybutyrate dehydrogenase [Pseudoxanthomonas... [more]
WP_093490649.11.900e-8765.64MULTISPECIES: 3-hydroxybutyrate dehydrogenase [Pse... [more]
WP_056881238.15.500e-8764.483-hydroxybutyrate dehydrogenase [Pseudoxanthomonas... [more]
WP_024869540.19.300e-8765.493-hydroxybutyrate dehydrogenase [Pseudoxanthomonas... [more]
WP_062356574.11.200e-8663.713-hydroxybutyrate dehydrogenase [Pseudoxanthomonas... [more]
WP_049726228.11.600e-8666.023-hydroxybutyrate dehydrogenase [Wenzhouxiangella ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000188NSK000188Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02690.1NO06G02690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597435gene_6595Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100073g11gene4243Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02690.1NO06G02690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02690 ID=NO06G02690|Name=NO06G02690|organism=Nannochloropsis oceanica|type=gene|length=1341bp
GTTGAATTTTCCATTCGCTATTAGTTGCATAGTATTAGTTCAAATCAACG
CGTGATTCCTATATATCATGAAACAAACTATTTATGGTCATAATATGCAC
CGACACCCGGTCTAATTTTTCGTATTCAAAGGGAACGGCAAATCTACGTC
ACAGCCGCTCATCTAAAATTCCAACGGACGACGACACCGACGAATCAGCC
GTTGGCAAGCAACCTGTTTTGTCCCCTCCACACGCCTGGTTCTCAAGCGT
TGCGTGCCGTATAATTACGTCTTTTTAAGTCCCATCATGTACCAGGCAAT
GTTTTGGTCTTATATGGCATGGAAACCATGCCCTTTTCCCAAACACAAAC
AGACAGGTGCCACACCACACTTCGCTCTTGGCGCAAACCACACCATGGCG
CTATCAATGAAGGGGTCGCGCCGCGCCTTGATCACGGGCGCGGGTAGTGG
TATCGGGGAGGGTATTGCTATCTCCTTGGCCATTGAGCATGGGTGGGAGA
TCATCGCTACGGATTTGAATTTCGAGGCGGCACAAGGAACGGCTGCGCAG
ATAAAGGCCCGGGGCGGCGAGGCCGAGGCATATGCGCTCAATGTAGCCGA
CAACTCTCAGATAACGGCACTCGTTGAGGAGCTCAAGGCGGGACGAAAAC
GAATTGATGTGTTGGTCAACAACGCAGGATTGCAGCACGTAGCGCGCTTG
GAAGATTTCCCGTCGGAGAAGTGGGGGTTTATGATCCAAGTCATGCTCAC
GGGGGTGGCCGACTTGACCCGGTCCATCTTGCCTATCATGCGTAAGCAAG
GCTTCGGCCGCATTGTGAACATTGGTTCTATCCACAGTGTGATTGCGTCT
CCATACAAGTCTGCATACGTGGCGGCGAAACACGGTTTGATTGGCTTTTC
TAAGGTCATGGCTTTGGAGACCAGTGACGTCGACGTCACAATCAATACTA
TCTGTCCTTCATATGTCAAAACACCCTTGGTGGATTCTCAAATTGCTAAC
CAGGCCAAGACTCATGGGATTAGTGAGGAGGATGTGATCAATAAAATTAT
GCTTGAACCCATGCCGAAAAAAGCGTTTATCTCGATGGAGGAGCTGGTGG
GGACAACGGTATTTTTGTCGTCCAACGCTGCGAGGAATATGACGGGGCAG
GCGTTGGTATTGGATGGGGGTTGGACAGTACGTTAATATATATCATTTAA
AGAAAGGAAGTACGTGGTGTGCACGTAAGAATTATGACTCGGTAGGCGAG
AGGATATACGCGAAGGGAAAGGTTGGTTTGCTTATGGGAGAGCGCGCCTT
TAAACAAAAATGAACAGGCGAACAACAAACGTTGCAGTGGA
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protein sequence of NO06G02690.1

>NO06G02690.1-protein ID=NO06G02690.1-protein|Name=NO06G02690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=300bp
MYQAMFWSYMAWKPCPFPKHKQTGATPHFALGANHTMALSMKGSRRALIT
GAGSGIGEGIAISLAIEHGWEIIATDLNFEAAQGTAAQIKARGGEAEAYA
LNVADNSQITALVEELKAGRKRIDVLVNNAGLQHVARLEDFPSEKWGFMI
QVMLTGVADLTRSILPIMRKQGFGRIVNIGSIHSVIASPYKSAYVAAKHG
LIGFSKVMALETSDVDVTINTICPSYVKTPLVDSQIANQAKTHGISEEDV
INKIMLEPMPKKAFISMEELVGTTVFLSSNAARNMTGQALVLDGGWTVR*
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Synonyms
Publications