NO06G02680, NO06G02680 (gene) Nannochloropsis oceanica

Overview
NameNO06G02680
Unique NameNO06G02680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1780
Alignment locationchr6:758665..760444 +

Link to JBrowse

Properties
Property NameValue
DescriptionRetinol dehydrogenase 13
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:758665..760444 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Homology
[Close]
BLAST of NO06G02680 vs. NCBI_GenBank
Match: EWM26286.1 (retinol dehydrogenase 13 [Nannochloropsis gaditana])

HSP 1 Score: 500.0 bits (1286), Expect = 5.900e-138
Identity = 247/328 (75.30%), Postives = 283/328 (86.28%), Query Frame = 0 
Query:    1 MLKWLVVALAIVLAIGSKYAKRKLPLVPVNLEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEWLIPISKAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAINKVLVRDAEDL--EVPEE 327
            M KWL+V +A++L +GSKYAKRKLPLVPV+L+GKHFIVTGASAGIGKETVRTLA+WNASVVMAVRN  KG AVLEDIR S+G   +PVEVWEMDL+K  SV+ FA +Y +S RPL VLINNAGLVSW+YI+TEDGHELT+QTNHLGHFLLTKLLM  L ASAPSRVIQVSS+AH+MGKIDLD+L+SSN+TYN  +TY +TKLMNV++ NEL RRFKD GVVSTSLHPGFV TEFLRD+PEW  PI  A C+LFAR+E+EGAKTQIMAATAP YE VGGVYFD+CAP+ PNKL LDE LA AFW+KSEEAI  +LV  +ED+  EV EE
Sbjct:   25 MFKWLLVVVAVLLGVGSKYAKRKLPLVPVDLDGKHFIVTGASAGIGKETVRTLAEWNASVVMAVRNVKKGTAVLEDIRLSIGRQDLPVEVWEMDLSKLSSVKDFADRYRDSGRPLHVLINNAGLVSWEYILTEDGHELTYQTNHLGHFLLTKLLMPSLLASAPSRVIQVSSDAHFMGKIDLDHLDSSNDTYNSMSTYAHTKLMNVVYANELTRRFKDVGVVSTSLHPGFVATEFLRDLPEWAQPIKNAMCSLFARNEVEGAKTQIMAATAPAYEGVGGVYFDACAPRVPNKLVLDEHLAAAFWDKSEEAIQHMLVEPSEDMSTEVAEE 352
[Close]
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_018615370.1 (PREDICTED: retinol dehydrogenase 12-like [Scleropages formosus])

HSP 1 Score: 231.9 bits (590), Expect = 3.000e-57
Identity = 136/305 (44.59%), Postives = 174/305 (57.05%), Query Frame = 0 
Query:   10 AIVLAIGSKYAKRKLPLVPVNLEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEWLIPISKA----ACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311
            AI LA+  K+    +   P  L  K  ++TGA+ GIGKET R +A+  A VVMA R+  +G    E+IR+S G   + V+  ++DLA F SVR FA +Y E    LD+LINNAG++     +T DG E     NHLGHFLLT LL+G LQ S PSRVI VSS AH  GKI  D+L  S  TYN   +Y  +KL N+LF  EL RR K SGV+S +LHPG ++TE  R V E   P+ K        L  +   EGA+T I  A     E   G YF  CA K+P   A D+ +A   WE S + +
Sbjct:   21 AISLALLRKWISGGVCYSPARLHRKTVLITGANTGIGKETARDMARRGARVVMACRDLTRGEKAAEEIRSSTGNSEVVVQ--QLDLASFASVRQFAKRYSEQEERLDILINNAGVMMCPKGLTVDGFETQFAVNHLGHFLLTNLLLGKLQKSTPSRVITVSSLAHKGGKIHFDDLSFSKTTYNSLTSYRQSKLANLLFARELARRLKGSGVMSFALHPGVIRTELGRHV-ELQNPLLKVLLYIPAFLLLKTPWEGAQTSIYCAVTEGLEGKSGSYFSDCALKKPAPEAQDDLVALRLWEVSAQLV 322
[Close]
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_023725019.1 (retinol dehydrogenase 11-like [Cryptotermes secundus] >XP_023725020.1 retinol dehydrogenase 11-like [Cryptotermes secundus] >XP_023725021.1 retinol dehydrogenase 11-like [Cryptotermes secundus] >XP_023725022.1 retinol dehydrogenase 11-like [Cryptotermes secundus] >XP_023725023.1 retinol dehydrogenase 11-like [Cryptotermes secundus] >XP_023725024.1 retinol dehydrogenase 11-like [Cryptotermes secundus] >XP_023725025.1 retinol dehydrogenase 11-like [Cryptotermes secundus] >XP_023725026.1 retinol dehydrogenase 11-like [Cryptotermes secundus] >XP_023725027.1 retinol dehydrogenase 11-like [Cryptotermes secundus] >XP_023725029.1 retinol dehydrogenase 11-like [Cryptotermes secundus] >XP_023725030.1 retinol dehydrogenase 11-like [Cryptotermes secundus] >PNF15558.1 Retinol dehydrogenase 11 [Cryptotermes secundus] >PNF15559.1 Retinol dehydrogenase 11 [Cryptotermes secundus] >PNF15560.1 Retinol dehydrogenase 11 [Cryptotermes secundus] >PNF15561.1 Retinol dehydrogenase 11 [Cryptotermes secundus] >PNF15562.1 Retinol dehydrogenase 11 [Cryptotermes secundus] >PNF15563.1 Retinol dehydrogenase 11 [Cryptotermes secundus])

HSP 1 Score: 229.2 bits (583), Expect = 1.900e-56
Identity = 128/280 (45.71%), Postives = 166/280 (59.29%), Query Frame = 0 
Query:   31 LEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEWLIPISKAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311
            L+GK  IVTGA+ GIGKET R LAQ  A V++  R+  KG    ++I AS G     VEV  +DL+   SVR FA   +++   LDVLINNAG    +  +T+DG  L  Q NH GHFLLT LL+  L+ S+PSR++ V+SE H +G +DLD+  S N  Y     Y N+KL NVL  NEL R+ K +GV   SLHPG + ++F R+    + PI K    LF +D  EGA+T I  A + + E V G YF  C     +K ALDE LA   WEKSE  +
Sbjct:   37 LDGKTVIVTGANTGIGKETARDLAQRGAKVILGCRDLEKGKKACDEIIASTGNAK--VEVQHLDLSSLASVRKFANNIIDTEPHLDVLINNAGATRVEQKLTDDGLLLGMQVNHFGHFLLTCLLVDLLKRSSPSRIVIVASELHRLGSLDLDDFNSVN-VYGSDRIYCNSKLANVLMSNELARKLKGTGVTVNSLHPGVILSDFFRNFGPIVGPIVKFFLLLFCKDVHEGAQTSIFLAVSEDVEGVSGKYFTDCKDASASKSALDEGLAKKLWEKSEALV 313
[Close]
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_019647926.1 (PREDICTED: retinol dehydrogenase 13-like [Branchiostoma belcheri])

HSP 1 Score: 228.0 bits (580), Expect = 4.300e-56
Identity = 131/309 (42.39%), Postives = 183/309 (59.22%), Query Frame = 0 
Query:   31 LEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYM-GKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVP-------EWLIPISKAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAINKVLVRDAEDLEVPEEQMEEE 332
            L+GK  ++TGA+ GIGKET R +A+  A V++A R+  K  A   +IR   G G++ +E  ++DLA  +SVR FA K   +   LD+LINNAG+++     TEDG E+   TNHLGHFLLT LL+  L+ SAPSRV+ VSS AH   GKI  D++ +  +TY  ++ YG +KL N+LF  EL+RR K +GV + SLHPG + TE  R +          L P+ +A   LF +   +GA+T I  A +   E   G YF  CAPK+P+K A D+  A   WE SEE +   L +D    E   E + ++
Sbjct:   50 LDGKTVVITGANTGIGKETARDIARRGARVILACRDLTKAEATAAEIRRDTGNGNVVME--KLDLASMKSVREFALKVNATESRLDILINNAGIMTCPQWKTEDGFEMQFGTNHLGHFLLTNLLLDKLKNSAPSRVVTVSSNAHMRGGKIHFDDI-NLEKTYTPYSAYGQSKLANILFTTELDRRLKGTGVTAYSLHPGVIATELARHMDVSFGLGFTLLKPVLRAFMLLFGKRPQQGAQTTIHCAVSEGLEEFSGQYFADCAPKKPSKEAQDDQTARRLWELSEEMVG--LKKDLAKAESAAEAIRKD 353
[Close]
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_022099436.1 (retinol dehydrogenase 12-like [Acanthaster planci] >XP_022099437.1 retinol dehydrogenase 12-like [Acanthaster planci])

HSP 1 Score: 226.9 bits (577), Expect = 9.600e-56
Identity = 125/288 (43.40%), Postives = 178/288 (61.81%), Query Frame = 0 
Query:   31 LEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDV----PEWLIPISKA----ACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311
            L+GK  I+TGA+AGIGKET R LA+  A V+MA R+ +K  +  EDIR +   G + V   ++DLA   SVRAFA K  E    L VLIN+AG++     +TEDG E+    NHLGHFLLT LL+  L++S+P+RV+ VSS AH  GKI  D++  +N TY+ F  YG +KL N+LF  EL++R + +GV +  LHPG VQT+  R +    P+ ++ ++ +    A   F +  +EGA+T I +A A E   + G+YF  CAP+ P+ +AL+E  A   W  S   +
Sbjct:   37 LDGKTVIITGANAGIGKETARDLARRGARVIMACRDVSKATSAREDIRGTTSRGQLVVR--QLDLASLASVRAFADKIKEEEPRLHVLINSAGVMMCPRQLTEDGFEMHFGVNHLGHFLLTNLLLDLLKSSSPARVVNVSSIAHGSGKIHWDDVNMTN-TYDRFDAYGQSKLANMLFTRELSKRLEGTGVTANCLHPGVVQTQLFRHIQAEKPDGVVGLAMSLINLAPGFFFKSAIEGAQTSIYSAVAEELTEISGMYFADCAPRMPSAVALNEEEARKLWTLSARLV 321
[Close]
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_007237334.2 (retinol dehydrogenase 13-like [Astyanax mexicanus])

HSP 1 Score: 225.3 bits (573), Expect = 2.800e-55
Identity = 123/283 (43.46%), Postives = 165/283 (58.30%), Query Frame = 0 
Query:   31 LEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEWLIPISKAAC---ALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311
            L+GK  ++TG++ GIGKET R LA+  A VVMA RN  +  A  E+IR S+G G++ V    ++LA   SVR FA ++L +   LD+LINNAG++     ITEDG+E+    NHLGHFLLT LL+  L+ SAPSRV+ VSS AH  G ID D+L      Y+   +Y  +KL NVLF  EL RR + +GV S SLHPG + TE  R    W   +    C    L  +   +GA+T I  A     E+  G YF  CA K+P  L  D+ +A   W++S   +
Sbjct:   42 LDGKTVLITGSNTGIGKETARDLARRGARVVMACRNLARAEAAAEEIRRSIGNGNVVVR--HLNLASLHSVREFAQEFLATEERLDILINNAGVMMCPKWITEDGYEMQLAVNHLGHFLLTNLLLKMLKNSAPSRVVTVSSIAHGGGNIDFDDLFFDKRPYSSLVSYKQSKLANVLFSKELARRLRGTGVSSYSLHPGIIYTEIGRHWESWYPLVKAILCLPSTLLMKTPWQGAQTSIYCAVTEGLENKSGCYFSDCAEKEPAPLGNDDKVAQRLWKESARLV 322
[Close]
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_017562361.1 (PREDICTED: retinol dehydrogenase 13-like isoform X2 [Pygocentrus nattereri])

HSP 1 Score: 223.8 bits (569), Expect = 8.200e-55
Identity = 119/283 (42.05%), Postives = 164/283 (57.95%), Query Frame = 0 
Query:   31 LEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEW---LIPISKAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311
            L+GK  ++TGA+ GIGKET R LA+  A VVMA R+  +     E+I+ + G G++ +    ++LA   SVR FA  +L +   LD+L+NNAG++     ITEDG+E     NHLGHFLLT LL+  L++S PSRV+ VSS AH  GK+D D++      YN   +Y  +KL NVLF  EL RR + +GV S SLHPG ++TE  R V  W   L  +    C L  +   +GA+T I  A     ES  G YF  C  +QP+    D+ +A   WE+S   +
Sbjct:   42 LDGKTALITGANTGIGKETARDLARRGARVVMACRDLTRAENAAEEIQRTTGNGNVVIR--HLNLASLYSVREFAKDFLATEERLDILVNNAGVMMCPKWITEDGYETQLAVNHLGHFLLTNLLLDLLKSSTPSRVVTVSSIAHVGGKVDFDDMFFDKRPYNSLVSYKQSKLANVLFSRELARRMRGTGVTSYSLHPGVIRTELGRHVESWHPLLKTVLSLPCILLMKTPWQGAQTTIYCAVTEGLESKSGCYFSDCVERQPSPEGKDDEVARRLWEESARLV 322
[Close]
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_022617707.1 (retinol dehydrogenase 13-like [Seriola dumerili])

HSP 1 Score: 223.4 bits (568), Expect = 1.100e-54
Identity = 127/303 (41.91%), Postives = 173/303 (57.10%), Query Frame = 0 
Query:   11 IVLAIGSKYAKRKLPLVPVNLEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEW---LIPISKAACALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311
            I +A+  K+    +    V L+GK  ++TGA+ GIGKET R LA+  A VVMA R+  +     E+IR + G G++ +    +DLA   SVR FA  +L+S   LD+LINNAG++     +TEDG E     NHLGHFLLT LL+  L++SAPSRV+ VSS AH  G+IDLD+L  S  TY+   +Y  +KL NVLF  EL RR + SGV S  LHPG ++TE  R V  W   L  +      L  +   +G++T +  A  P  E   G YF  CA K+      D+ +A   WE+S   +
Sbjct:   51 ICVAVLRKWIAGGVCRCSVRLDGKTVLITGANTGIGKETSRDLARRGARVVMACRDLTRAERAAEEIRRTTGNGNVVIR--HLDLASVYSVRQFAKDFLDSEDRLDILINNAGVMMCPKWLTEDGFETQLAVNHLGHFLLTNLLLPKLKSSAPSRVVNVSSIAHRGGRIDLDDLFFSRRTYSSLESYRQSKLANVLFSRELARRLRGSGVSSFCLHPGVIRTELGRHVQGWFPLLGALLSLPSLLLMKTPTQGSQTTVYCAVTPGLEERSGRYFSDCAEKEVAPEGQDDVMARKLWEESSRLV 351
[Close]
BLAST of NO06G02680 vs. NCBI_GenBank
Match: KPP73165.1 (retinol dehydrogenase 12-like, partial [Scleropages formosus])

HSP 1 Score: 223.0 bits (567), Expect = 1.400e-54
Identity = 125/284 (44.01%), Postives = 163/284 (57.39%), Query Frame = 0 
Query:   31 LEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEWLIPISKAA----CALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311
            L+GK  ++TG++ GIGKET R +A+  A VVMA R+  +     E+IR S G GS+ V    +DLA   SV+ F  +Y+ + + LD+LINNAG++      TEDG+E     NHLGHFLLT LL+G L++SAPSRVI VSS AH  GKI  D+L      YN   +Y  +KL NVLF  EL RR K +GV S SLHPG ++TE  R +  W  P+ K        L  +   EGA+T I  A     E   G YF  CA K+P     D+  A   WE S + +
Sbjct:   31 LDGKTVMITGSNTGIGKETARDMARRGARVVMACRDLTRAEKAAEEIRRSTGNGSVVVR--HLDLASLYSVKEFTKEYIATEQRLDILINNAGVMMCPKWHTEDGYETQLAVNHLGHFLLTNLLLGKLKSSAPSRVINVSSMAHKGGKIHFDDLCFEKIPYNSLVSYRQSKLANVLFSKELARRTKGTGVTSYSLHPGVIRTELSRHIETW-FPLLKMVLLIPSMLLMKTPWEGAQTSIYCAVTEGLEEKSGCYFSDCAVKEPAPEGKDDLTALRLWEVSAQLV 311
[Close]
BLAST of NO06G02680 vs. NCBI_GenBank
Match: XP_018620320.1 (PREDICTED: retinol dehydrogenase 12-like isoform X1 [Scleropages formosus])

HSP 1 Score: 223.0 bits (567), Expect = 1.400e-54
Identity = 125/284 (44.01%), Postives = 163/284 (57.39%), Query Frame = 0 
Query:   31 LEGKHFIVTGASAGIGKETVRTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFESVRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLLTKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNTKLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEWLIPISKAA----CALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALATAFWEKSEEAI 311
            L+GK  ++TG++ GIGKET R +A+  A VVMA R+  +     E+IR S G GS+ V    +DLA   SV+ F  +Y+ + + LD+LINNAG++      TEDG+E     NHLGHFLLT LL+G L++SAPSRVI VSS AH  GKI  D+L      YN   +Y  +KL NVLF  EL RR K +GV S SLHPG ++TE  R +  W  P+ K        L  +   EGA+T I  A     E   G YF  CA K+P     D+  A   WE S + +
Sbjct:   42 LDGKTVMITGSNTGIGKETARDMARRGARVVMACRDLTRAEKAAEEIRRSTGNGSVVVR--HLDLASLYSVKEFTKEYIATEQRLDILINNAGVMMCPKWHTEDGYETQLAVNHLGHFLLTNLLLGKLKSSAPSRVINVSSMAHKGGKIHFDDLCFEKIPYNSLVSYRQSKLANVLFSKELARRTKGTGVTSYSLHPGVIRTELSRHIETW-FPLLKMVLLIPSMLLMKTPWEGAQTSIYCAVTEGLEEKSGCYFSDCAVKEPAPEGKDDLTALRLWEVSAQLV 322
The following BLAST results are available for this feature:
BLAST of NO06G02680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26286.15.900e-13875.30retinol dehydrogenase 13 [Nannochloropsis gaditana... [more]
XP_018615370.13.000e-5744.59PREDICTED: retinol dehydrogenase 12-like [Scleropa... [more]
XP_023725019.11.900e-5645.71retinol dehydrogenase 11-like [Cryptotermes secund... [more]
XP_019647926.14.300e-5642.39PREDICTED: retinol dehydrogenase 13-like [Branchio... [more]
XP_022099436.19.600e-5643.40retinol dehydrogenase 12-like [Acanthaster planci]... [more]
XP_007237334.22.800e-5543.46retinol dehydrogenase 13-like [Astyanax mexicanus][more]
XP_017562361.18.200e-5542.05PREDICTED: retinol dehydrogenase 13-like isoform X... [more]
XP_022617707.11.100e-5441.91retinol dehydrogenase 13-like [Seriola dumerili][more]
KPP73165.11.400e-5444.01retinol dehydrogenase 12-like, partial [Scleropage... [more]
XP_018620320.11.400e-5444.01PREDICTED: retinol dehydrogenase 12-like isoform X... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000189NSK000189Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02680.1NO06G02680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597432gene_6594Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100073g10gene4244Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02680.1NO06G02680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02680 ID=NO06G02680|Name=NO06G02680|organism=Nannochloropsis oceanica|type=gene|length=1780bp
CGGATCTGTCTCCATGCCTTTGCTTCTTTTGTTCAATCTTGACTTCTACT
ACCATCCAATTACGTACAAATTCCAGTCAAAATTTAGATCCCTCTTCCTT
CCAGTGGAGGTGCCCTTGCCGGACTTGGCACAGCGTGCAAACAAGGCTAT
AGGTCGCCACACTTCCAAGTTCATCATGTCCGTGAGTCACGTTGTCACGT
CGGTCCCACGAATCATGTTCTTCGTCAGCAGCCCCCCCTTTGCCGGCGGA
GCGGGACCGCTCGTCAAAACTACACGTAGCCCGCACGCGCACCAGACTTT
TGCACGCCTAGCAGGCCATCTTGGCTTGTATTTTTTAGGGTGCTTGCTCG
CGGAGGATCGAGCAGACCGACATACACAAGGCGAAGGCCGCCTGTACGCC
TGGGACACATATCCATGTGGACGCGTACGCATCCCCCCCCCTCCCCACGC
GAACACTCACACATGCCCACACACACATACACACATAGGACAATAGTTTA
AATTTGCTTCAAATCATGCTCAAATGGCTCGTTGTTGCCCTCGCCATTGT
CCTGGCTATTGGCTCAAAGTATGCGAAGAGGAAGCTTCCCTTGGTGCCCG
TCAACTTGGAAGGCAAGCATTTCATTGTCACTGGCGCCAGTGCCGGTATC
GGCAAGGAAACCGTCCGTACCCTAGCACAATGGAACGCCAGTGTGGTCAT
GGCCGTACGTAACACAAACAAGGGTAACGCCGTGCTGGAGGACATCCGCG
CATCGCTTGGAGGAGGCAGTATTCCCGTGGAAGTATGGGAGATGGATTTA
GCGAAATTTGAATCCGTTCGGGCGTTCGCTGCCAAGTACCTGGAATCTAG
TCGCCCTTTAGATGTTTTGATCAACAATGCGGGGCTGGTCTCGTGGGATT
ATATCATAACGGAGGATGGTCATGAGCTCACTCACCAGACTAATCACCTC
GGGCATTTCTTGCTTACCAAGCTTTTGATGGGCCCGCTCCAGGCCTCGGC
GCCCTCGCGAGTGATTCAAGTTTCTTCAGAAGCTCACTATATGGGCAAGA
TCGATTTGGgtgagtcggagagggggagggggcagtgaggatgatggctt
tgcgaagcatcaccgttgaaatgcagcatccttccttccttctctcttac
gtgaccctgcttttttcacttttaccgacacagACAACCTCGAATCTTCC
AACGAGACCTACAATCACTTTGCCACCTATGGCAACACCAAGCTCATGAA
TGTCCTGTTCGGCAATGAGCTCAACCGCCGCTTCAAGGACTCAGGCGTTG
TCTCCACCTCCCTCCATCCCGGATTCGTCCAAACGGAGTTCCTGAGAGAC
GTCCCTGAATGGCTGATACCAATCAGCAAAGCTGCATGTGCTTTATTTGC
TCGTGATGAAATGGAGGGGGCCAAGACCCAGATCATGGCTGCCACGGCAC
CGGAGTACGAAAGTGTGGGAGGTGTGTATTTTGATTCGTGTGCGCCAAAG
CAACCAAATAAGCTTGCGTTGGACGAGGCGTTGGCCACGGCATTTTGGGA
GAAGTCCGAGGAGGCTATCAACAAAGTGCTGGTTCGAGATGCGGAGGATT
TAGAGGTGCCGGAAGAGCAGATGGAAGAGGAGGTGTTCAAGGATGCCGTC
GAGGCGTAACGAGTGATGTGTATTGGCTGAGGCCTGATATGGGAATTCGG
AAAATAAACTGGACATAAGAAAGTACTATGTTGTTTTATCCTAATTGAAC
TGTTTTCCTTTCGAACCTTGATCATTCAAT
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protein sequence of NO06G02680.1

>NO06G02680.1-protein ID=NO06G02680.1-protein|Name=NO06G02680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=340bp
MLKWLVVALAIVLAIGSKYAKRKLPLVPVNLEGKHFIVTGASAGIGKETV
RTLAQWNASVVMAVRNTNKGNAVLEDIRASLGGGSIPVEVWEMDLAKFES
VRAFAAKYLESSRPLDVLINNAGLVSWDYIITEDGHELTHQTNHLGHFLL
TKLLMGPLQASAPSRVIQVSSEAHYMGKIDLDNLESSNETYNHFATYGNT
KLMNVLFGNELNRRFKDSGVVSTSLHPGFVQTEFLRDVPEWLIPISKAAC
ALFARDEMEGAKTQIMAATAPEYESVGGVYFDSCAPKQPNKLALDEALAT
AFWEKSEEAINKVLVRDAEDLEVPEEQMEEEVFKDAVEA*
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Synonyms
Publications