NO06G02580, NO06G02580 (gene) Nannochloropsis oceanica

Overview
NameNO06G02580
Unique NameNO06G02580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6111
Alignment locationchr6:721305..727415 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:721305..727415 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR019400Peptidase_C65_otubain
IPR001202WW_dom
Homology
The following BLAST results are available for this feature:
BLAST of NO06G02580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000202NSK000202Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02580.1NO06G02580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|122241gene_6577Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02580.1NO06G02580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02580 ID=NO06G02580|Name=NO06G02580|organism=Nannochloropsis oceanica|type=gene|length=6111bp
AAACACAGCTGACCAGACCAGATCTGGCCCATCTACGCACGATGATGGTG
GCCTGTGCCACCAAATCATGAACCCCACGACCGCTGCCGCCCATATAAGA
CCTCCAGCTACCAATGGATGACACCTTTGGTGATATGACGCCCACTCTGC
GGGATGGCGTGGAGGATGACTATCCGGCGGAGGAAGAGTACGACTACGGC
TACACTGACAGTACCACCATGGAGGGCGATGACGGCTTTAACATGCCTGT
GTCCGGAGAGGCCGACGGTCAAGGCAACCTGTTGAGCTCCCAGAACAACC
TGAATGTGGAGGAAAATGACAACCTTGCATTTGGTAAACCCAGGATAGAT
CCCGCTAGTGGGAACATCGACGACCCCAACGCGGACGTCAGCTTCGACCG
GAACTCCACGCGATTCACCCTCAATGGCAATTTAGCCAAATGGAGGGTCA
AGCACAGGCCTGTCAAAATCTCTCAAAATGGGACTCAGCTCTGTGGCACA
AAGATGAGTTTCACAAGTTATTTTCAAAGCCTGTTGCACCGTGCATATGC
CGCCACCTTTTCTCCTTTCTCTGGGTCGTCATCGAGCTCAAGCTCAAGTG
GCAAGAACACCAACACCAGCGGTACTTCGGGCAGTGACGACACCATTACT
ACTGTAGCATGTAGCACTGCCTCCTCCACGTCCTTCTCGCCGAGAAAGTC
CGTGATCCAAAAACTCAACTGCGCGCGGAGTCAACGTCGCACGGGACAGA
GCGGACAGGCCTCCCGAGGTGGCAATGTTGAAGCTTTCCGAGGAAAGGAG
AATGGAATTATGACAAAATTTGAATCCACTCCCTCCTCTTCTTCTCCTGT
GCCTCCTTTGTCTCCAGCACTCGAGGACATGATCTCTCCGCGTGTATTTA
ATACCACGGGGCAGGGTGTGGGTGAGGGCAGGAGGGACGGGGATAAGGTG
GAGGAGGAGAAACGGCGAACATTTAATGGACCAGTTTGGCAGACGACCTT
GACAATTATGCAGGTACGTGAGGCTGAGGAAGAAGGGGAGGATGGGATTG
AGGAGGAATGGCGCTTGGCTGGGATGCCGAAAAAAGAGGATAATTTTCAC
GAAGACGAGCAAGATGTACGTCATCCCGGTGACGACGATGGTGGGAAATA
TGACATTCCTTTGCCTTTAGCGGTGGATACGCAAACGGGAATCGATTTGG
ATGATGCAATGGTAACAAGGGTAGAAGCTACAGCAGCAAGCAAAGCAGCA
GCAGCAGCAGCAACATCAACAGAAACGGCAGCTGAAGAGGGAAGGGGCAA
GGAGTCCGACGCCATGTTTGTCCTTTCCTCCCCGCCACATGTAGCGGCAC
CGAGACAAGCACCAGCTATGGTGTCTTCATCTCCACTATCATCACCTCTA
GTACGCTCTACTGCATCGCCAACGATGCAACAACCGCCGCGGCAGTCTCA
TGCATCACAAGGTCAATCTCCCATGGAGCATAAATCAGCAGCAGCAGCAG
CAGCAGCAATGCCACCACCACCACCACCACCACCACCACAACGTCCCATG
AGATCTCAAGCGCCGCAGCTTCCACGATCGCGGCCATCACCACCATCGCT
TTCTGTGCCTCCTTTGCCACCACATGTACGGGAAAGATCCCCCAAATCTC
TCCCACCTACATCACTACCCCTCCAGCCGTCATGGCAAGCTCCGCCCGTT
GCGCCTAGAGAGCGTCCGTCAGCCGAGAAAGCGCCATCTCCAGTGCGGGA
TAGAGCTTTCAAATTTAATTCACAGCTTGCCTTTCCACCTTCATTATCGC
AACCACCCCTGCAGCAGCAGATGCGGCCTCGTCCAATTCCCGAGCGAGGC
TCAGTGAAAACAGGACCAATGGCAGGAATGCCTGTGAGCCCCCTTCGTTC
ATCTCCACCTTTCCAAGCACCCGTGCAGCGGGTGACACTACCAACGACAT
CGCAGCAGGCCTGTGAGATGAATGCCCGCGCTCCTCCGGTGCGAGCGTCC
GCAACACAAGGACGGTCGCCTCCCCTCCCTCCCCTTCACTCTCAAGCAAT
GGGAGCACTCACACGGGTAGCAGCAGAAGCAGCGGCAACAGCAAAATTTA
TACCAACAGCCACAAATATGGCTCCAGCGATGAGGACAACACCTCTTTCG
TCTGCAACTGCTCCCCTTCCTTTCGCACAGTCGGCATTTTTATTGTTACC
CACGCCAGCCCAGGTATTTTCAAGAGGAAAACGTCGCCCGCGTGCGGGAC
TTCAGACTTCGTCGTCACCATCACTGTTGAACGGAAAGACAAAGCGAAAA
TTTTCAGCTTATGAGGGTACGGAGGGCCAACAAGTAACTTGCATGGCTCC
ACTCCCCATGCTGCCTGCACTACCGTCGACGGCGGACGCGTTGGGCCTCC
TTCCGCTAAGGCTGACACTGAATTTACAGCAGCAGAAGCAGCGCCAGCAG
CAGAGACAGCAGCGGCGGCAGCGCCAGCAGCAGAGGCAGGATAAGCACCG
CCAACAATACCGGCAGAAGCAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACATCAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACATGTAAGCCGGCTCTGTCAG
CATTGGCGGCAGCAGCAGCAGCAGCAGCAACATCAATCGCAACAGTACGG
CAGAATCCAGCATCACCAGGAACCGGAGCAGGTGAAGAAACAGCAGCCAA
TCTTGCCGCAGAGGTCTTCAAGTCCGGAATCATTGTCTCCTCAGGAAGAG
CAATCTCACTCCCGACCCATGTCGCAGCCACAATCCCTGCCGCTGTTATG
CCTCCAGCACGAAGTTGAAGTGCAGCCATTGCATCTTCAGGGGCCTCATC
AGCTTTCCCCCGCACGATCGAGGACGCTCTCGCCGCTCCCTTCATTTTCC
TCGCCTCCCCACTCTCCTTCAAGGAAGCCGGACAAGCAAACGGCACCCAG
CATGGCCTTACCCATCGCGTCGACAGGAAGCCTCCCTTCTGCAGACGCCT
CCTTGCCTTCCCGCCCACCCTCAAGGACAAGCAGCACTCAAACGGCACCC
GACTCGTCTGTGTCTGCTGTACAAACAGCAAGACCCTCTGCTATCCCTCC
CCCCCTCGCCTTGCTTCCGCGTCCTCCCTCAAGGGCAACCAGTACGCAAA
CAGAAGCTGACACACCCTCGCCCGCTCTGCCCTCTGCACCGCTCTCTCCC
TGTCTTCAATCGGCCTCGCCTGCAAGGCCTCTCTGGAACCTACCCACCGG
CATGAGCCCGCCCTATCCCACCTCGGCCCTGCCTTCTTCTCCGCCGGTCC
CTTGCTCTGCTCCTCCTGCCTCCCCCCTGCAATCATTGCTTCAAAATGGT
ATGACCGGTGACGGGAAAACACTTACACTTGCCAGACAAGGCTTAAGAGA
CACCACTATCCTCACCCACCTCTATCGACGACGACTCCTTCAACACGGCA
GCAGTGGTAGCAGCAGCATAACCCTGGGTTCCATCCTCCTCTCTCTCGAC
CTGTCCTTCAATAATCTCGAAATCGTAAATGGATTGCGAAATTTCTGTGA
ATTGAAGCATTTGGACCTCTCACATAACAATTTGACAGACATCCGTTGTC
GTTACCCACCCCGGCTCGAAACCCTCAAATTAAGCCACAATAAAATCACA
TCCGTTGCAGGCCTGGACGGGATGGAGGCAGGCCTGCTCCGCGTGCTTGA
CCTGTCGCATAACCCCCTTTGGATGGTCGATGGCATTATGCACCTCAAGG
GGTTGACAGAGCTAGATCTCTCGCACACCCGTTTGAGGAAACCACTGGAC
GTTCGCCTCCTCTCCTTCAATGCTTCCTTGCAGTCTCTCTCTATCATAGG
CACGCCTCTTGCCCAAAAGTGTGTAAAGAGCGGAAAGATCGTCATCATGT
CCCTCCTCCCTGATCTCCGTCTCTTCAACCACAATCCATCCTCCTCCCGT
CGGGCCAAGTGCCAAGACCGGAACAAAAACGAGATAGCCCTCACCCGCCT
CTCCACGTCCTCCACCAGCACCTCCCCCTCCGCCCGCACCCGCGCCGTTC
AACAGCAAAAGGATTCTCAACGCAGCTACCACTATCTCCAGCAATGCCGC
GCTCGGGAAAAGGCGAAACTTCTCCAGGAACTTGCATTTGAAAATTCATT
TAAACAGCCCCCACACGTCCCGGCAGAATTGCAGCGAGTCCATGTCGCAT
ATCTAAGTGTGCCGAAGACGAGTAATCCTTATGGGCATCTGCTTTGTCGA
CTTTTGCATGCTCGACGGGAGACGCAGCAGCGGGGTGGGAGGAAGAGGAG
GAGAAGGAGGGAGAGAAAGCAGGAGGAGCAGGAGGGGGGGCAGAAAGAAG
AGGATGGGCAGGAGGAGCAGGAGCAGGAGCAGGAAGAGGAAGAGGAGGAG
AAGGAGGGAGACCGCACCTCAGAGTCTTCTTTTCTTTTGTCGGCGGAGCG
TAGGCGATTACTCTTGCAGAAGGTGGTCCTGCGTGAGGTCGTGGCCCGAC
GATGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGTTT
AAGCATCGACGACCACAACAGGAGGGAGAGGATATAGATGGAGCCGCAGC
AGATGAAGAAAGAGACTCAACACCACATGTTGCTGCTGCTCCTGCTTTTA
CAGCTCCTGCTTCTACTCCTGCAGCCGGCGAACTACTGCCCTCCACCTCT
CGTTTCATGCCTCAGGATAAGATCCCTCCTTCAGAGGTGGAGGCTTTCCT
GGCAGCTATTGAGGAGGACTTGGTGACCACAATTGCGGCTTTGCATGTCG
CTGTCCAAAGTGTAAATGGCATTGACAGAAATGGAGACGAAGATGAAGAG
GAGGAGGGCGCGAATGATGGGACAGGAGGGGGGAGGGGGGAGAAATACGG
GGAGGGGGTATTAACGAGGGTAGGGAGACGATTGAAGGGTTATTATGGGC
AGATGAAAGTCTTAGAGCCTTTTCGTGTTCCTTTTGATTTCAAGCTTGAG
GCAAGGAAGAGGAGGGAGGGAGTGGGGGAGGGAGGGGCTGTAGGGAGGGT
GGAAGAGGAGGTGTTGAAGAAGGTGGAGAAAGGAAATGAGATGAAGAGGG
AGTTGAGGACCTTGCTGGATTTGATGGTGAAGGGGGGGATTGTTGGGGCC
TTGACGTTAGCGGAGATGTTACGGAACAAGTATAGGGTGGATGAGGAAGA
GGAGGACGAGAATGAAGACGAGGAGGGGGAGGAGGCTTCGGAAAGCAGGT
GGCCTTCGCTTGTGGACGAGGACGAGGAAGGCAAAGTGGATATGTCTGAA
TACAAATCTCCTGTGACGGCTCCGAAACGGCAGGGAAAGATTAAGAAGAG
GGGGGAAAGATTCGCCTCGGAAGCTTTGTGGGGAAGAGAAGAGGTGGGGA
GGACGGGGAGGCAATGGGAAGGAGGAGATGGCGAGGAAGAGGAAGAGGGG
GACGAGGAGTACGAGGAGGGCGAGGACGAGGAGGAATTGTCTCGGTTGCT
TGAAGAAGAAGGGGAGGAGGAGCAAGAGGAGGAGGAGGAGGAGGAAGTCG
TGTGGACAGAGAGTTTTGATAGGCACTACCAGGCATTTTTCTACTTCAAT
GAACGGACAGGAAAGAGTCAGTGGCACAAGCCCAAGGCGCCTTATGTCGC
TTATGATGAAGAGGAGGGTGATGACGTGTGAAAGAGGGTGGAAATGAGGA
AGGTGGGGGGGGAGAAGGAGGAGAAAGTGGGGGGGGAGAAAGGGGAGGAG
GACGACGACGAGGAGAAGGAGAAGGAGGAGGAGAAGGAGGAAGAAGAAAA
CGAGGAGGAAAAAGATTTGTAAAGGCAGATTAAGAAAGTGTTACTTTATT
CGTGTCTGTGCATGCATATTAAATTGCCGATAATGATATGGTAACGAGCC
GACCAACTCATACACTGAACAGCATATGAAAACTTGAAAGTCAAATAACA
GATAGAGATGA
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protein sequence of NO06G02580.1

>NO06G02580.1-protein ID=NO06G02580.1-protein|Name=NO06G02580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1906bp
MDDTFGDMTPTLRDGVEDDYPAEEEYDYGYTDSTTMEGDDGFNMPVSGEA
DGQGNLLSSQNNLNVEENDNLAFGKPRIDPASGNIDDPNADVSFDRNSTR
FTLNGNLAKWRVKHRPVKISQNGTQLCGTKMSFTSYFQSLLHRAYAATFS
PFSGSSSSSSSSGKNTNTSGTSGSDDTITTVACSTASSTSFSPRKSVIQK
LNCARSQRRTGQSGQASRGGNVEAFRGKENGIMTKFESTPSSSSPVPPLS
PALEDMISPRVFNTTGQGVGEGRRDGDKVEEEKRRTFNGPVWQTTLTIMQ
VREAEEEGEDGIEEEWRLAGMPKKEDNFHEDEQDVRHPGDDDGGKYDIPL
PLAVDTQTGIDLDDAMVTRVEATAASKAAAAAATSTETAAEEGRGKESDA
MFVLSSPPHVAAPRQAPAMVSSSPLSSPLVRSTASPTMQQPPRQSHASQG
QSPMEHKSAAAAAAAMPPPPPPPPPQRPMRSQAPQLPRSRPSPPSLSVPP
LPPHVRERSPKSLPPTSLPLQPSWQAPPVAPRERPSAEKAPSPVRDRAFK
FNSQLAFPPSLSQPPLQQQMRPRPIPERGSVKTGPMAGMPVSPLRSSPPF
QAPVQRVTLPTTSQQACEMNARAPPVRASATQGRSPPLPPLHSQAMGALT
RVAAEAAATAKFIPTATNMAPAMRTTPLSSATAPLPFAQSAFLLLPTPAQ
VFSRGKRRPRAGLQTSSSPSLLNGKTKRKFSAYEGTEGQQVTCMAPLPML
PALPSTADALGLLPLRLTLNLQQQKQRQQQRQQRRQRQQQRQDKHRQQYR
QKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQHVSRLCQHWRQQQQQQQHQSQQYGRIQH
HQEPEQVKKQQPILPQRSSSPESLSPQEEQSHSRPMSQPQSLPLLCLQHE
VEVQPLHLQGPHQLSPARSRTLSPLPSFSSPPHSPSRKPDKQTAPSMALP
IASTGSLPSADASLPSRPPSRTSSTQTAPDSSVSAVQTARPSAIPPPLAL
LPRPPSRATSTQTEADTPSPALPSAPLSPCLQSASPARPLWNLPTGMSPP
YPTSALPSSPPVPCSAPPASPLQSLLQNGMTGDGKTLTLARQGLRDTTIL
THLYRRRLLQHGSSGSSSITLGSILLSLDLSFNNLEIVNGLRNFCELKHL
DLSHNNLTDIRCRYPPRLETLKLSHNKITSVAGLDGMEAGLLRVLDLSHN
PLWMVDGIMHLKGLTELDLSHTRLRKPLDVRLLSFNASLQSLSIIGTPLA
QKCVKSGKIVIMSLLPDLRLFNHNPSSSRRAKCQDRNKNEIALTRLSTSS
TSTSPSARTRAVQQQKDSQRSYHYLQQCRAREKAKLLQELAFENSFKQPP
HVPAELQRVHVAYLSVPKTSNPYGHLLCRLLHARRETQQRGGRKRRRRRE
RKQEEQEGGQKEEDGQEEQEQEQEEEEEEKEGDRTSESSFLLSAERRRLL
LQKVVLREVVARRWQQQQQQQQQQQQQRFKHRRPQQEGEDIDGAAADEER
DSTPHVAAAPAFTAPASTPAAGELLPSTSRFMPQDKIPPSEVEAFLAAIE
EDLVTTIAALHVAVQSVNGIDRNGDEDEEEEGANDGTGGGRGEKYGEGVL
TRVGRRLKGYYGQMKVLEPFRVPFDFKLEARKRREGVGEGGAVGRVEEEV
LKKVEKGNEMKRELRTLLDLMVKGGIVGALTLAEMLRNKYRVDEEEEDEN
EDEEGEEASESRWPSLVDEDEEGKVDMSEYKSPVTAPKRQGKIKKRGERF
ASEALWGREEVGRTGRQWEGGDGEEEEEGDEEYEEGEDEEELSRLLEEEG
EEEQEEEEEEEVVWTESFDRHYQAFFYFNERTGKSQWHKPKAPYVAYDEE
EGDDV*
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Synonyms
Publications