NO06G02560, NO06G02560 (gene) Nannochloropsis oceanica

Overview
NameNO06G02560
Unique NameNO06G02560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1508
Alignment locationchr6:718761..720268 +

Link to JBrowse

Properties
Property NameValue
DescriptionProliferating cell nuclear antigen
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:718761..720268 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030337DNA polymerase processivity factor activity
GO:0003677DNA binding
GO:0030234enzyme regulator activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006275regulation of DNA replication
GO:0009058biosynthetic process
GO:0006259DNA metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR022649Pr_cel_nuc_antig_C
IPR022648Pr_cel_nuc_antig_N
IPR000730Pr_cel_nuc_antig
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO06G02560 vs. NCBI_GenBank
Match: EWM26272.1 (proliferating cell nuclear antigen [Nannochloropsis gaditana])

HSP 1 Score: 486.5 bits (1251), Expect = 5.200e-134
Identity = 241/259 (93.05%), Postives = 251/259 (96.91%), Query Frame = 0
Query:    1 MFEARLTEGNLLKKIIEAIKDLVQEANVDCSDTGLTMQAMDASHVSLCSLNMRSGGFDHFRCDRSISLGLNLSNLGKILKCAGNEDVVTLKAEDEPDTLTLMFEAPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSVEFQRIIRDLAVIGETCIISCTKEGVRFSVSGDLGKGNVTVRQSSAVDGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGPTVKLHMSPDVPIVVEYPMKDIGSISYFLAPKIDED 260
            MFEARLTEG+LLKKIIEAIKDLVQEANVDCS+ GLTMQAMDASHVSLCSLNMR GGFDH+RCDRSISLGLNL+NLGKILKCAGN+DVVTLKAEDEPDTLTLMFE+PNQERISDFELKLMDIETEHLGIPNEEYKCTISMPS EFQRI+RDLAVIGETCII+CTKEGV+FSVSGDLG GNVTVRQSSA DGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLG TVKLHMSPDVPIVVEYP+  IGSISYFLAPKIDED
Sbjct:    1 MFEARLTEGSLLKKIIEAIKDLVQEANVDCSEEGLTMQAMDASHVSLCSLNMRHGGFDHYRCDRSISLGLNLANLGKILKCAGNDDVVTLKAEDEPDTLTLMFESPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSGEFQRIVRDLAVIGETCIITCTKEGVKFSVSGDLGNGNVTVRQSSAADGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGSTVKLHMSPDVPIVVEYPIDGIGSISYFLAPKIDED 259          
BLAST of NO06G02560 vs. NCBI_GenBank
Match: XP_002288154.1 (pcna-like protein [Thalassiosira pseudonana CCMP1335] >EED93590.1 pcna-like protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 384.4 bits (986), Expect = 2.800e-103
Identity = 184/259 (71.04%), Postives = 224/259 (86.49%), Query Frame = 0
Query:    1 MFEARLTEGNLLKKIIEAIKDLVQEANVDCSDTGLTMQAMDASHVSLCSLNMRSGGFDHFRCDRSISLGLNLSNLGKILKCAGNEDVVTLKAEDEPDTLTLMFEAPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSVEFQRIIRDLAVIGETCIISCTKEGVRFSVSGDLGKGNVTVRQSSAVDGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGPTVKLHMSPDVPIVVEYPMKDIGSISYFLAPKIDED 260
            MFEARLT+G + K++IEA+KDLVQEAN+DC+D  +++QAMD SHVSL ++++RSGGFDHFRCDR ISLG N +N+GKILKCAGN+DV+TL+AEDE D+L L+FE+P Q+RI+DFELKLMDI+ E LGIP+ EYKCTI MPS EFQRIIRDL V+G+TC ISCTKEGV+FSVSGDLG GNV VRQ+SA + DE ++V I+M+EPV L FALRYL FFTKAT LGPTV L MSP+VP+VVEYP+ + G I Y+LAPKIDED
Sbjct:    1 MFEARLTQGKVFKQLIEALKDLVQEANIDCTDDEISIQAMDNSHVSLVAVSLRSGGFDHFRCDRPISLGFNAANMGKILKCAGNDDVITLRAEDEGDSLALVFESPGQDRIADFELKLMDIDNEQLGIPDTEYKCTIQMPSAEFQRIIRDLQVLGDTCTISCTKEGVKFSVSGDLGSGNVLVRQNSAAEKDE-EKVMIEMDEPVELTFALRYLNFFTKATSLGPTVILSMSPEVPVVVEYPIGETGHIKYYLAPKIDED 258          
BLAST of NO06G02560 vs. NCBI_GenBank
Match: CBJ25497.1 (pcna-like protein [Ectocarpus siliculosus])

HSP 1 Score: 363.6 bits (932), Expect = 5.100e-97
Identity = 171/258 (66.28%), Postives = 215/258 (83.33%), Query Frame = 0
Query:    1 MFEARLTEGNLLKKIIEAIKDLVQEANVDCSDTGLTMQAMDASHVSLCSLNMRSGGFDHFRCDRSISLGLNLSNLGKILKCAGNEDVVTLKAEDEPDTLTLMFEAPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSVEFQRIIRDLAVIGETCIISCTKEGVRFSVSGDLGKGNVTVRQSSAVDGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGPTVKLHMSPDVPIVVEYPMKDIGSISYFLAPKIDE 259
            M+EARL + +LLKKIIEA+++LV +AN+DCS++G++MQAMD+SHVSLC+L +RS GF H+RCDRS+SLGL+  ++ KILKCAGN+D VTLKAED  D LT+MFE+P Q+RISDFELKLMDI++EHLGIP  EY C I MPS EF RI+RDL VIG+TC I+C K+GV FSVSGD+GKGN+ VR +++VD  E+D+V + MEEPVTL FALRYL  F KATPLGPTV + M+PD P+VVEYP+   G + Y+LAPKIDE
Sbjct:    1 MYEARLLQASLLKKIIEAVRELVTDANLDCSESGISMQAMDSSHVSLCALMIRSDGFQHYRCDRSLSLGLSTGSISKILKCAGNDDTVTLKAEDTADALTIMFESPKQDRISDFELKLMDIDSEHLGIPKTEYNCIIQMPSAEFARIMRDLQVIGDTCTIACDKDGVNFSVSGDMGKGNIMVRNNTSVD-KEEDKVTVTMEEPVTLKFALRYLSLFAKATPLGPTVTISMTPDNPVVVEYPIDTFGYVRYYLAPKIDE 257          
BLAST of NO06G02560 vs. NCBI_GenBank
Match: EJK74768.1 (hypothetical protein THAOC_03537 [Thalassiosira oceanica])

HSP 1 Score: 352.1 bits (902), Expect = 1.500e-93
Identity = 180/305 (59.02%), Postives = 221/305 (72.46%), Query Frame = 0
Query:    1 MFEARLTEGNLLKKIIEAIKDLVQEANVDCSDTGLTMQAMDASHVSLCSLNMRSGGFDHFRCDRSISLGLNLSNLGKILKCAGNEDVVTLKAEDEPDTLTLMFEAPNQERISDF----------------------------------------------ELKLMDIETEHLGIPNEEYKCTISMPSVEFQRIIRDLAVIGETCIISCTKEGVRFSVSGDLGKGNVTVRQSSAVDGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGPTVKLHMSPDVPIVVEYPMKDIGSISYFLAPKIDED 260
            MFEARLT G +LK++IEA+KDLVQEAN+DCSD  +++QAMD SHVSL ++++RSGGFDHFRCDR +SLG N +N+GKILKCAGNED +TLKAED+ D+L+++FE PNQ+RI+DF                                              ELKLMDI++E LGIP+ +YK TI MPS EFQRIIRD+ V+G+T  ISCTKEGV+F V GDLG GNV +RQ++  + DE D+V I+MEEPV L FALRYL FFTKAT LGPTV L+MSPDVPIVVEYP+ + G I Y+LAPKIDED
Sbjct:   92 MFEARLTSGKILKQLIEALKDLVQEANIDCSDDEISIQAMDNSHVSLVAVSLRSGGFDHFRCDRPLSLGFNATNMGKILKCAGNEDAITLKAEDDGDSLSMVFEGPNQDRIADFGEFARGARGSDSPPGSRREKCWKIDFNFATMRGVGVLVVIFDRKIYELKLMDIDSEQLGIPDTDYKVTIQMPSGEFQRIIRDMQVLGDTLSISCTKEGVKFGVQGDLGTGNVLIRQNAHAEKDE-DRVMIEMEEPVELTFALRYLNFFTKATNLGPTVILNMSPDVPIVVEYPIGETGHIKYYLAPKIDED 395          
BLAST of NO06G02560 vs. NCBI_GenBank
Match: XP_005825576.1 (proliferating cell nuclear antigen [Guillardia theta CCMP2712] >EKX38596.1 proliferating cell nuclear antigen [Guillardia theta CCMP2712])

HSP 1 Score: 350.1 bits (897), Expect = 5.800e-93
Identity = 168/258 (65.12%), Postives = 217/258 (84.11%), Query Frame = 0
Query:    1 MFEARLTEGNLLKKIIEAIKDLVQEANVDCSDTGLTMQAMDASHVSLCSLNMRSGGFDHFRCDRSISLGLNLSNLGKILKCAGNEDVVTLKAEDEPDTLTLMFEAPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSVEFQRIIRDLAVIGETCIISCTKEGVRFSVSGDLGKGNVTVRQSSAVDGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGPTVKLHMSPDVPIVVEYPMKDIGSISYFLAPKIDE 259
            MFEARL +G+LLKK+IEAI++LV +AN D S +G+++QAMD SHVSL SL +R  GF+HFRCDRS+SLGLNL+++ K+LKCA N+D +TLKAED+ DTLTLMFE+PNQ+RISDFE+KLMDI++EHLGIP+ EYK T+ M + EFQRI+RDL+ IG+T  ISCTKE V+FSV GD+G+GNV +R ++AVD +++  + I++EEPV+L FALRYL  FTKATPL  TV L MSPDVP+V EY + D+G+I +FLAPKIDE
Sbjct:    1 MFEARLAQGSLLKKLIEAIRELVTDANFDVSTSGVSLQAMDTSHVSLVSLLLREDGFEHFRCDRSLSLGLNLASITKMLKCANNDDAITLKAEDQGDTLTLMFESPNQDRISDFEIKLMDIDSEHLGIPDTEYKATVKMSAAEFQRIMRDLSTIGDTVSISCTKEAVKFSVEGDIGQGNVIMRHNAAVDKEDEATI-IELEEPVSLTFALRYLNLFTKATPLSSTVTLSMSPDVPLVTEYKVGDMGNIRFFLAPKIDE 257          
BLAST of NO06G02560 vs. NCBI_GenBank
Match: XP_013397320.1 (proliferating cell nuclear antigen [Lingula anatina] >XP_013410417.1 proliferating cell nuclear antigen-like [Lingula anatina])

HSP 1 Score: 341.7 bits (875), Expect = 2.100e-90
Identity = 158/258 (61.24%), Postives = 213/258 (82.56%), Query Frame = 0
Query:    1 MFEARLTEGNLLKKIIEAIKDLVQEANVDCSDTGLTMQAMDASHVSLCSLNMRSGGFDHFRCDRSISLGLNLSNLGKILKCAGNEDVVTLKAEDEPDTLTLMFEAPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSVEFQRIIRDLAVIGETCIISCTKEGVRFSVSGDLGKGNVTVRQSSAVDGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGPTVKLHMSPDVPIVVEYPMKDIGSISYFLAPKIDE 259
            MFEARL +G+LLKK++EA+KDL+ + + +CSD G+++QAMD+SHVSL SL +RS GFD FRCDR++SLG+NL+++ KILKCAGN+DVVT+KA D PDT+T MFE+PNQ+++SD+E+KL+D++ +HLGIP  +Y C I +PS EFQRI RDL+ I E+ +I CTKEGVRFS SGD+G GN+ + Q+S VD  E++ V I+M+EPVTL FALRYL FFTKATPL   V L MSP++P+VVEY + D+G + Y+LAPKI++
Sbjct:    1 MFEARLVQGSLLKKVLEAVKDLLTDGSFECSDNGISLQAMDSSHVSLVSLLLRSEGFDTFRCDRNMSLGINLASMAKILKCAGNDDVVTIKAVDNPDTVTYMFESPNQDKVSDYEMKLVDLDGDHLGIPETDYSCVIKLPSAEFQRICRDLSQISESVVICCTKEGVRFSASGDMGTGNIKLVQNSNVD-KEEEAVTIEMQEPVTLTFALRYLNFFTKATPLSNQVTLSMSPEIPLVVEYKIADMGHVRYYLAPKIED 257          
BLAST of NO06G02560 vs. NCBI_GenBank
Match: XP_023233455.1 (proliferating cell nuclear antigen-like [Centruroides sculpturatus])

HSP 1 Score: 339.7 bits (870), Expect = 7.800e-90
Identity = 160/258 (62.02%), Postives = 215/258 (83.33%), Query Frame = 0
Query:    1 MFEARLTEGNLLKKIIEAIKDLVQEANVDCSDTGLTMQAMDASHVSLCSLNMRSGGFDHFRCDRSISLGLNLSNLGKILKCAGNEDVVTLKAEDEPDTLTLMFEAPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSVEFQRIIRDLAVIGETCIISCTKEGVRFSVSGDLGKGNVTVRQSSAVDGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGPTVKLHMSPDVPIVVEYPMKDIGSISYFLAPKIDE 259
            MFEARL +G LLKK++EAIKDL+ EA  DC+ TG+++QAMD SHVSL SLN+RS GFD FRCDR++S+G+NL+++ KILKCA N+D++T+KA+D+ DT+T +FEAPNQE+ISD+E+KLM+++TEHLGIP+ EY   + MPS EFQRI RDL+ IG++  I+CTK+GV+FSVSGDLG GNV + Q++ VD  E++ V I M+EPV+L FALRYL  FTKATPL P V++ +S DVP+VVEY ++D+G I Y+LAPKI++
Sbjct:    1 MFEARLVQGALLKKVLEAIKDLINEATWDCAATGISLQAMDNSHVSLVSLNLRSDGFDKFRCDRNLSMGINLTSMSKILKCAANDDIITIKAQDDADTVTFVFEAPNQEKISDYEMKLMNLDTEHLGIPDTEYSVVVKMPSSEFQRICRDLSQIGDSVSITCTKDGVKFSVSGDLGTGNVKLSQTANVD-KEEEAVIIDMQEPVSLTFALRYLNSFTKATPLSPQVQISISADVPLVVEYKIEDMGYIRYYLAPKIED 257          
BLAST of NO06G02560 vs. NCBI_GenBank
Match: XP_002500879.1 (predicted protein [Micromonas commoda] >ACO62137.1 predicted protein [Micromonas commoda])

HSP 1 Score: 339.0 bits (868), Expect = 1.300e-89
Identity = 156/259 (60.23%), Postives = 216/259 (83.40%), Query Frame = 0
Query:    1 MFEARLTEGNLLKKIIEAIKDLVQEANVDCSDTGLTMQAMDASHVSLCSLNMRSGGFDHFRCDRSISLGLNLSNLGKILKCAGNEDVVTLKAEDEPDTLTLMFEAPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSVEFQRIIRDLAVIGETCIISCTKEGVRFSVSGDLGKGNVTVRQSSAVDGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGPTVKLHMSPDVPIVVEYPMKDIGSISYFLAPKIDED 260
            MFEARL +G+LLKK++E+IKDLV +AN DCS+ G  +QAMD+SHVSL +L +RS GF+H+RCDR++++G+NLSN+ K+LKCAGNED++T+KA+D  D +T MFE+P+Q++ISDFELKLMDI++EHLGIP+ EY  T+ MPS EF RI RDL+ IG+T  IS +K+GV+FS +GD+G+ N+T RQ+++VD +E  Q  I+++EPVTL FALRYL  FTKATPL PTV+L MS ++P+VV+Y + D+G + Y+LAPKI++D
Sbjct:    1 MFEARLVQGSLLKKVLESIKDLVTDANFDCSNNGFALQAMDSSHVSLVALLLRSDGFEHYRCDRNMTMGMNLSNMSKMLKCAGNEDIITMKADDTGDVVTFMFESPDQDKISDFELKLMDIDSEHLGIPDTEYAATVKMPSSEFMRICRDLSSIGDTVTISVSKDGVKFSTTGDIGQANITCRQNTSVDKEE--QTIIELQEPVTLTFALRYLNSFTKATPLAPTVQLQMSKELPVVVQYLIADMGYVRYYLAPKIEDD 257          
BLAST of NO06G02560 vs. NCBI_GenBank
Match: AFV81453.1 (proliferating cell nuclear antigen, partial [Scrobicularia plana])

HSP 1 Score: 338.6 bits (867), Expect = 1.700e-89
Identity = 156/259 (60.23%), Postives = 211/259 (81.47%), Query Frame = 0
Query:    1 MFEARLTEGNLLKKIIEAIKDLVQEANVDCSDTGLTMQAMDASHVSLCSLNMRSGGFDHFRCDRSISLGLNLSNLGKILKCAGNEDVVTLKAEDEPDTLTLMFEAPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSVEFQRIIRDLAVIGETCIISCTKEGVRFSVSGDLGKGNVTVRQSSAVDGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGPTVKLHMSPDVPIVVEYPMKDIGSISYFLAPKIDED 260
            MFEARL +G+L KKII+AIKDL+ EA  DC+ +G+T+QAMD SHVSL SL++R  GFD FRCDR++++G+NL ++ KI++CAGN+DV+T+K  D  DT+T +FE+PNQE++SD+E++L+D++TEHLGIP  +Y C + MPS EFQRI RDL+ IGE+ I+ CTKEGV+FS SGDLG GN+ + Q+S+ D  E+D V I+M E VTL FALRYL FFTKATPL P VKL MSP+VP+VVEY + ++G + Y+LAPK+++D
Sbjct:    1 MFEARLVQGSLWKKIIDAIKDLLTEAIFDCNSSGITLQAMDGSHVSLVSLSLRCEGFDTFRCDRNLAMGINLPSMAKIIRCAGNDDVITVKTGDNADTVTFVFESPNQEKVSDYEVRLVDLDTEHLGIPETDYSCVVRMPSAEFQRICRDLSQIGESVIVCCTKEGVKFSASGDLGTGNIKLAQTSSCD-KEEDNVVIEMNEAVTLTFALRYLNFFTKATPLSPQVKLSMSPEVPLVVEYKVAEMGHLRYYLAPKLEDD 258          
BLAST of NO06G02560 vs. NCBI_GenBank
Match: XP_009022843.1 (hypothetical protein HELRODRAFT_185039 [Helobdella robusta] >ESN98905.1 hypothetical protein HELRODRAFT_185039 [Helobdella robusta])

HSP 1 Score: 338.2 bits (866), Expect = 2.300e-89
Identity = 160/259 (61.78%), Postives = 209/259 (80.69%), Query Frame = 0
Query:    1 MFEARLTEGNLLKKIIEAIKDLVQEANVDCSDTGLTMQAMDASHVSLCSLNMRSGGFDHFRCDRSISLGLNLSNLGKILKCAGNEDVVTLKAEDEPDTLTLMFEAPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSVEFQRIIRDLAVIGETCIISCTKEGVRFSVSGDLGKGNVTVRQSSAVDGDEKDQVKIQMEEPVTLNFALRYLGFFTKATPLGPTVKLHMSPDVPIVVEYPMKDIGSISYFLAPKIDED 260
            MFEARL +G+LLKK++EA+KDL+ EA  DC+ TG+++QAMD+SHVSL SL +RS GFD +RCDR+IS+G+NL ++ KIL+CAGNED +T+KA D  DT+T MFE+PN E++SD+E+KLMD++TEHLGIP  +Y C I +PS EFQRI RDL+ IGE+ +I CTKEGV+FS +GDLG GN+ + QS+ VD  E + V I+M+E VTL FALRYL FFTKATPL   V L MS DVP+VVEY + D+G I Y+LAPKI+++
Sbjct:    1 MFEARLVQGSLLKKVLEAVKDLLNEATWDCNGTGMSLQAMDSSHVSLVSLCLRSDGFDTYRCDRNISMGINLGSMSKILRCAGNEDAITVKANDTTDTITFMFESPNGEKVSDYEMKLMDLDTEHLGIPETDYSCVIKLPSSEFQRICRDLSQIGESVVICCTKEGVKFSANGDLGTGNIKLAQSANVD-KEDEAVVIEMQEAVTLTFALRYLNFFTKATPLSARVSLSMSADVPLVVEYKIGDMGYIRYYLAPKIEDN 258          
The following BLAST results are available for this feature:
BLAST of NO06G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26272.15.200e-13493.05proliferating cell nuclear antigen [Nannochloropsi... [more]
XP_002288154.12.800e-10371.04pcna-like protein [Thalassiosira pseudonana CCMP13... [more]
CBJ25497.15.100e-9766.28pcna-like protein [Ectocarpus siliculosus][more]
EJK74768.11.500e-9359.02hypothetical protein THAOC_03537 [Thalassiosira oc... [more]
XP_005825576.15.800e-9365.12proliferating cell nuclear antigen [Guillardia the... [more]
XP_013397320.12.100e-9061.24proliferating cell nuclear antigen [Lingula anatin... [more]
XP_023233455.17.800e-9062.02proliferating cell nuclear antigen-like [Centruroi... [more]
XP_002500879.11.300e-8960.23predicted protein [Micromonas commoda] >ACO62137.1... [more]
AFV81453.11.700e-8960.23proliferating cell nuclear antigen, partial [Scrob... [more]
XP_009022843.12.300e-8961.78hypothetical protein HELRODRAFT_185039 [Helobdella... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000204NSK000204Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02560.1NO06G02560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597382gene_6575Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100145g17gene4254Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02560.1NO06G02560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02560 ID=NO06G02560|Name=NO06G02560|organism=Nannochloropsis oceanica|type=gene|length=1508bp
AAGAAAAGTGCCTTCCCCGCGCACACGGCCGACTTTATTTTGCCTTCTCG
TCCCTAAAGTTATCGCCCACACCAGGCTGCACGTCTATTTGTGCCGGAGC
GTCCAGTGTGTGCTGCCACACAGTCACCTAGTCTGGTACGGAAGGTTACC
GTATCGCCTCCAGCGAAGCTCCGCCTCTTTCTGCACCGCCGAAGCCTCCT
TCCTTTTCTGTGGCGTGATGCGTTTTCCACAACCGCAGGAAAGACACTTC
CCACGGCACATCCACTAAGATCGCGGCCACCTTGATTTGCAGTGCGTTAC
CCTAGTAGCCACAATCCAGCTGCGGAACAGGACGTGCCAAGCTGGCTCTC
GTATCAAGCCCGCGGAAAAGGCATCCCCTGCCCCTTTCTGTGCCTCACTT
TTCCCTCCCTTCCCCCGCACCTCACATTACAGTCAGCCCCCTCCTCACAC
CACCATGTTTGAAGCCCGGCTTACGGAGGGAAACCTCCTGAAGAAGATCA
TCGAGGCCATCAAGGACCTGGTCCAAGAAGCTAACGTGGACTGCTCCGAC
ACGGGACTGACCATGCAGGCTATGGATGCTTCCCACGTCTCCCTCTGCTC
CCTCAACATGCGCTCCGGCGGCTTTGACCACTTCAGGTGCGATCGCTCAA
TCTCCTTGGGTCTGAACTTAAGCAACCTCGGCAAGATCCTCAAGTGCGCA
GGGAACGAGGACGTAGTTACGCTCAAGGCGGAAGACGAGCCCGATACATT
GACCCTCATGTTCGAAGCCCCCAACCAAGAGCGCATCTCCGACTTCGAGC
TCAAACTGATGGACATTGAGACAGAGCACCTGGGCATTCCCAATGAGGAG
TACAAATGCACGATTTCCATGCCCTCCGTTGAGTTTCAACGCATTATTCG
CGACTTGGCCGTGATTGGCGAGACGTGCATCATCAGCTGCACCAAGGAAG
GAGTCCGCTTCTCAGTCTCAGGGGACCTGGGCAAGGGGAATGTAACGGTG
CGTCAATCATCGGCGGTGGACGGCGACGAGAAGGATCAGGTGAAGATCCA
GATGGAGGAGCCTGTCACGCTGAACTTTGCTTTGCGATACTTAGGTTTCT
TCACCAAGGCAACCCCCCTTGGCCCGACGGTGAAATTGCACATGTCCCCA
GATGTGCCCATCGTGGTGGAGTACCCGATGAAAGACATTGGTTCGATCTC
TTACTTCTTGGCGCCCAAGATCGATGAAGATTAACAGGGGTGCGGGGGAG
AGCGAAGGAAGGAGGGAGGGAAGGTGAGAAAGTAGCGGGGGAAAGCAGGA
AACGCAATTATTTTAGATGTTAAGAGTGCAGGAAAAGTAAGAAGAAAGGT
GTGTGTCCTGAATAGATGATGAACTGCATTGGGCAGGGGTTCCCTTGACG
AGAAAGGCCGTGAGTGTCCACGAGGAAGGAAGGGTGGGAGGGGAAGGGAG
AGAGGGACTGAAGAGAGCACCAAAGAATATAACACATACGTATCAAATGT
CTCATCAC
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protein sequence of NO06G02560.1

>NO06G02560.1-protein ID=NO06G02560.1-protein|Name=NO06G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=260bp
MFEARLTEGNLLKKIIEAIKDLVQEANVDCSDTGLTMQAMDASHVSLCSL
NMRSGGFDHFRCDRSISLGLNLSNLGKILKCAGNEDVVTLKAEDEPDTLT
LMFEAPNQERISDFELKLMDIETEHLGIPNEEYKCTISMPSVEFQRIIRD
LAVIGETCIISCTKEGVRFSVSGDLGKGNVTVRQSSAVDGDEKDQVKIQM
EEPVTLNFALRYLGFFTKATPLGPTVKLHMSPDVPIVVEYPMKDIGSISY
FLAPKIDED*
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