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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr6 | genome | chr6:708214..711868 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0070461 | SAGA-type complex |
| GO:0070461 | SAGA-type complex |
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR024738 | Hfi1/Tada1 |
Homology
BLAST of NO06G02520 vs. NCBI_GenBank
Match: EWM26265.1 (hypothetical protein Naga_100145g12 [Nannochloropsis gaditana]) HSP 1 Score: 181.8 bits (460), Expect = 1.000e-41 Identity = 121/280 (43.21%), Postives = 148/280 (52.86%), Query Frame = 0
Query: 2 EGGGGCLEGLLERQQPEGHHRERRRP---PAEAHAHGNPHAPPMARQDLINLKMAVFERLSHGHMQRSNSAGSSGSARLPHPPLCRLWALYRKSLRLFLIGELTKPELDAVVIYTLGDENVQVHNALVRGLVHNVMASSLPSHPEGIAATTMSRVRGLGFEGDAND----GVLLKGRMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTLHAIFQREFGEGSAVWDVWAPMQQANHRRAAAEAAAQLAELEFRQVKSLMD 275
+G GC RQ PEG+ ERR P P H+ P R+DL LK+AVFE++S H +R++ SGSA+ PP+ RLWALYRKSLRLFLIGELTKPELDAVVIY+LGDENV VHN L+RG+V NV HP + SR G+ + + G + GR EG +Q L F+RE G SA+WDVW PM+QA+HRRA AEA A AE+EFR+VKS MD
Sbjct: 6 DGASGC-HAPTSRQPPEGYDWERRGPRSSPTRDHS-------PGLRRDLTGLKIAVFEKISRRHQRRTSGNEGSGSAQQTGPPVARLWALYRKSLRLFLIGELTKPELDAVVIYSLGDENVHVHNDLIRGVVQNVSIQESERHPGQASGVPTSRFCGISKKVVRREIGGYGNSVHGR-EG---------------NEHRKRAGDVAGDDRVEPSEGEDGEDSDTEQSQALLRAFERELGAKSALWDVWGPMRQASHRRAVAEARACRAEIEFRRVKSRMD 261
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02520 ID=NO06G02520|Name=NO06G02520|organism=Nannochloropsis oceanica|type=gene|length=3655bp
ACAGCGGCATTGCTACGTGACACGGGCCAGTGGGAAGCCCGACGCTATTG
CTAGCTTCTGCGCAAGTAACACACTCGCATCATCGTGCCGTCAATCACGC
ACCGAGGTTGACCTCTCTATAACTGGGACGGGCACAAAGAGACGTGGCAC
CAGCTGGTTGCGTTGAGGAAGGATGGAAGGTGGTGGGGGCTGCCTGGAGG
GGCTGTTGGAAAGGCAGCAACCAGAAGGACATCACCGGGAACGGAGGAGG
CCTCCAGCCGAGGCCCACGCACATGGAAACCCACACGCCCCACCGATGGC
ACGACAAGATTTAATCAACCTTAAAATGGCAGTGTTTGAAAGACTTTCGC
ATGGCCACATGCAACGGAGCAACAGTGCCGGTAGCAGTGGGAGTGCGAGG
CTGCCACACCCGCCGTTATGTCGGCTGTGGGCCTTGTATCGCAAGTCCCT
CCGCCTGTTCTTGATTGGGGAGCTGACCAAGCCGGAGTTGGATGCAGTGG
TAATATATACGCTAGGCGACGAAAATGgtacgtgcggaatgggttgacgg
atgggagagtggagctttgagtaagactttgggacaaaaaaaaatggtct
caccgagcatgtggcagcctgcatcaccattttctatcagcatacgagca
tatgaatattttgcactgcaattcgaaggcacctcatcaatttcggaatt
aaatctgatttatatctgcgttctatcctccacatttactttcacattca
tgcagTACAAGTGCACAACGCTCTAGTCCGAGGTCTAGTCCATAACGTCA
TGGCCTCAAGCCTGCCCTCCCATCCTGAAGGAATAGCAGCAACGACAATG
AGCAGAGTTCGAGGCCTGGGGTTTGAGGGCGATGCCAATGATGGGGTCTT
ATTGAAAGGTCGGATGGAAGGAGAGGGGAGCGCTGGTTCTCCGAATAACA
GCAGCAGCAGCGGCAGCGGCAGCGGTCAAAAACGAATACGACTAAAAGAA
CAGACAAAAGAAGAAGAGGATGGGGATAAGGATGAGGACGAGGATGAGGA
GACAGAGCGCGCTCAGACGCTACATGCAATTTTTCAGAGAGAATTTGGGG
AAGGCAGTGCGGTGTGGGATGTATGGGCGCCAATGCAGCAAGCTAATCAT
CGACGCGCGGCAGCAGAAGCAGCTGCCCAACTAGCAGAGCTGGAGTTTCG
GCAGGTCAAGTCCCTCATGGACTTTCGTATGGTGAATGGGCTGCCGTCGT
TTTCATCCATTCCTCCCCCTCCTTCTCCGCCCACTTCCTGTCCTAGTTCG
GCTTCTGCTTCCCAACGGCCGACCACGGCCTATTCAGGCTCGGTAGGTTC
TTCGTCGTCGTCGTCGTCTCCCGCTTCCTCATTCACATCCCCTTCCAGAT
GCGCGCAACCTGTGATAATGTCCGCGCCAGCAGTAGCAGTAGCAGCAGCA
GCAGCAGCAGCAGCAATAACGACACGATCGGCAAGTGAAGAGACTGAGGA
AGGATTAGGAAAGGAGGGAGGAAAAGAAGAATCTGGAGCGAGGGCCGGGT
CCTCCCCTCCACCATCAGGTGCAGCAGCAGTAGAGCTAGCTAGAAAGAAA
AAGGGGATGGAAAACAGAAAAGGAGGAGGGAGGGGGGGAAAGGACGTTGT
CGATAGCGCTGGCATACTGTCAAGAGCCAGTGCTGCATCAGAACTAGAAC
CACGGGCGGCTGTGGCAGCAACAGCAGGAGCAGGTATGACTGCGGCAACA
ATCGGAGATAGGAAAGATGAAGGCAAGGATGGGTCTGACGCGAGCCCTGC
AATTGTATCACGAGCAGGAACACATATCTCGGCGCCTATCCTGGCCGTTG
GGGCAGCTCCAACAACACCAGCAGCAATAACAGCACCATCAACACTAACC
TCACCAACAGCACCAGAAGCGCAACCAGCCAGCAAGGGGACATATGGGAT
AGGGCCAGAAGGAGGGCAATCAGAGCCGCAGGAGGACGATGGAAATGTGG
TTCCCGCTCTGCCAGCGCTACCACCATTACCGCCATTGGCAGCAAGCGCA
TTCTCGTTGGGTGCCGCTGCAGCTGGTGGCATCAACCCACCGGATGAAAA
CCAGAAGGAATCAGAGAAGGAGGAGGAAGAGTCGGAGAAGGCATTAGTGA
GTGCTTCAGCAACAGGAGCAGTGGTAGCTCCATCTGCACCAGCACCAACA
GCACCAGCAGAGCCAGCAGCACCAGCAACATCGGCATCATCATCGTCCCA
ACCACGCGCCCCTCCAGTGGCGGTGGTGGCAGCTGCTGCTGATGAGGCAC
CAAAAAAAGAGGGATATGGGACACATGCGATTGACGTTGTCATACTTACC
CCTTCCTCTTCACCTCCTATTATTTCTGCTGCAGCTACTTCTCCTTCCTC
AGAGCGACCTGCCTCTCCTTCTTCTACATTCAAGAGCGCAGCACCCACAG
GCAGACTCTCGCCTCCCCCACCTCCACCACCGCCTTCCTCCGCTCCTTCC
TTGCAGCAGCAGCAGCAGCAACAAGAGCAGCAGCATCAGTGGCAACCCAT
GCCCACACTCAAGCACGAAGATAAATGTGAGGAGCCACCTGTGGTGACCG
AAGCCTCCTACCTTCCCGAGGCATGCATGCCCCACCCCCTAATCATCCAC
TTCCTCCTACGCACTGCCGGTGCCACCGACTCCGAGCTTGGGTCACGTCT
TGCTCATTCAGCAGTAGCAGCAGCAGCGGGAAGAGGTGGTGGAGGGGAAA
GGGCAAGCCCCTCCCCGACGAAGCGTGCAAGGAAGAATCATGCATATACA
AGGCATTTGGCCGTGTCAGTGGAAGCGATGGAAGGCCTAGATGAAGGTGC
GGAGCTGTTTGTGAAACGCTTGCTGGCCCGGTGTGTTCATGTGTCCAAGA
GGCAACAAGAGGGAGGCAGTACCGTTGTCATTCCTCCTTTTCCCATGCCT
CGGCTTGGGACTGAGGGAGGTATTGGTGCAAAAGTAGGAGCAGTAGGAGC
AGCAGAAGCAGCAGCAGTGCCTGTGAGAGGAGAGGCATTAGGGCAAATTG
AGTCGTCTCAGTCTGGTGCCGCCATTTTGGAGATACAGATGGTGAGAACC
GATGAAGAAGACGTGCCGAATACAACGACTGCAGTGGCGGCGGGGCAGGA
TGGCTGCAGCAACAGAAAGGAAGATGGCGATGCGGGTGCTGGATCACGTG
CAGAGGAGACGGCGAAGAAAAAGAATGGTGGCGCGGTAATGATTGATGCA
GCAATGCTGTTCAAAGCTTTGCGTGTGCCCAGCACGGATGACCGGGACCC
GCTGGGACGTTTGTTCCCACCGGACGGACTACTGGAAGAGCTAGTGGCCT
CGTCTGGTATCTAGGGAGGAAAATAAGCGTGGGAAAAGGAAGGATGCGAT
GGGAAGAAAGGGGATAATAAGGAGAGAAAAGAGGTTGTCTTACCGACCAG
GATGAAGCGAAAGCGTGTGAATTACCAAAGAATCGACTTTGGATGTAAAC
AGTGCACAAACCCGCGTTTGTACAATAAGATCAGAAAAGGAAAGGGGTCG
AGGAAAAGGTGTTTGTCGGTCTGTGTGCGTAAGAACCAAGACCAGCACAC
GCACTGACAAGGAGCGGTGCGATCCCAAAATGAATAACAAAAGACTTTGT
CACGA back to topprotein sequence of NO06G02520.1 >NO06G02520.1-protein ID=NO06G02520.1-protein|Name=NO06G02520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=988bp
MEGGGGCLEGLLERQQPEGHHRERRRPPAEAHAHGNPHAPPMARQDLINL
KMAVFERLSHGHMQRSNSAGSSGSARLPHPPLCRLWALYRKSLRLFLIGE
LTKPELDAVVIYTLGDENVQVHNALVRGLVHNVMASSLPSHPEGIAATTM
SRVRGLGFEGDANDGVLLKGRMEGEGSAGSPNNSSSSGSGSGQKRIRLKE
QTKEEEDGDKDEDEDEETERAQTLHAIFQREFGEGSAVWDVWAPMQQANH
RRAAAEAAAQLAELEFRQVKSLMDFRMVNGLPSFSSIPPPPSPPTSCPSS
ASASQRPTTAYSGSVGSSSSSSSPASSFTSPSRCAQPVIMSAPAVAVAAA
AAAAAITTRSASEETEEGLGKEGGKEESGARAGSSPPPSGAAAVELARKK
KGMENRKGGGRGGKDVVDSAGILSRASAASELEPRAAVAATAGAGMTAAT
IGDRKDEGKDGSDASPAIVSRAGTHISAPILAVGAAPTTPAAITAPSTLT
SPTAPEAQPASKGTYGIGPEGGQSEPQEDDGNVVPALPALPPLPPLAASA
FSLGAAAAGGINPPDENQKESEKEEEESEKALVSASATGAVVAPSAPAPT
APAEPAAPATSASSSSQPRAPPVAVVAAAADEAPKKEGYGTHAIDVVILT
PSSSPPIISAAATSPSSERPASPSSTFKSAAPTGRLSPPPPPPPPSSAPS
LQQQQQQQEQQHQWQPMPTLKHEDKCEEPPVVTEASYLPEACMPHPLIIH
FLLRTAGATDSELGSRLAHSAVAAAAGRGGGGERASPSPTKRARKNHAYT
RHLAVSVEAMEGLDEGAELFVKRLLARCVHVSKRQQEGGSTVVIPPFPMP
RLGTEGGIGAKVGAVGAAEAAAVPVRGEALGQIESSQSGAAILEIQMVRT
DEEDVPNTTTAVAAGQDGCSNRKEDGDAGAGSRAEETAKKKNGGAVMIDA
AMLFKALRVPSTDDRDPLGRLFPPDGLLEELVASSGI* back to top
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