NO06G02480, NO06G02480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02480 vs. NCBI_GenBank
Match: XP_005855298.1 (hypothetical protein NGA_2102500, partial [Nannochloropsis gaditana CCMP526] >EKU21063.1 hypothetical protein NGA_2102500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 263.5 bits (672), Expect = 3.900e-67 Identity = 123/143 (86.01%), Postives = 133/143 (93.01%), Query Frame = 0 Query: 1 MSDPQARLQAAVTASMDKLDRAYIRQLSKKAYSCMATCHDQSSYTSQDIQQCVGACSMGLQEVNALIGNELQYFQNRLQRCQQSCEDEVRDAQAKMGGGKPDPSQQTKLQGVYDKCVGKCIDSHLPLINAMESKLAGECKRRL 144 M+DPQARLQAAVT MDKLDRAYIR+LSK AYSCMA CHD SSYTSQD+QQCVGACS GLQE+NALI NELQYFQNRLQRCQQSCEDEVRD QAK GGGKPDPSQQ KLQG+YDKCVGKC+D+HLPL+NAME+KLAGECK+RL Sbjct: 16 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL 158
BLAST of NO06G02480 vs. NCBI_GenBank
Match: EWM26263.1 (uncharacterized protein Naga_100145g7 [Nannochloropsis gaditana]) HSP 1 Score: 263.5 bits (672), Expect = 3.900e-67 Identity = 123/143 (86.01%), Postives = 133/143 (93.01%), Query Frame = 0 Query: 1 MSDPQARLQAAVTASMDKLDRAYIRQLSKKAYSCMATCHDQSSYTSQDIQQCVGACSMGLQEVNALIGNELQYFQNRLQRCQQSCEDEVRDAQAKMGGGKPDPSQQTKLQGVYDKCVGKCIDSHLPLINAMESKLAGECKRRL 144 M+DPQARLQAAVT MDKLDRAYIR+LSK AYSCMA CHD SSYTSQD+QQCVGACS GLQE+NALI NELQYFQNRLQRCQQSCEDEVRD QAK GGGKPDPSQQ KLQG+YDKCVGKC+D+HLPL+NAME+KLAGECK+RL Sbjct: 1 MTDPQARLQAAVTTCMDKLDRAYIRKLSKNAYSCMAACHDHSSYTSQDVQQCVGACSTGLQEINALISNELQYFQNRLQRCQQSCEDEVRDTQAKAGGGKPDPSQQAKLQGIYDKCVGKCVDTHLPLVNAMEAKLAGECKKRL 143
BLAST of NO06G02480 vs. NCBI_GenBank
Match: CCI45809.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 94.7 bits (234), Expect = 2.400e-16 Identity = 47/131 (35.88%), Postives = 73/131 (55.73%), Query Frame = 0 Query: 5 QARLQAAVTASMDKLDRAYIRQLSKKAYSCMATCHDQSSYTSQDIQQCVGACSMGLQEVNALIGNELQYFQNRLQRCQQSCEDEVRDAQAKMGGGKPDPSQQTKLQGVYDKCVGKCIDSHLPLINAMESKL 136 + ++ AV M++LD +IR K+ Y C A C D + +S+ IQ CV C +Q++ +I ELQ FQNRLQRC C+D RD+ K D Q+++Q + CVG+C+D + I ++ +L Sbjct: 3 EQKINDAVHGMMEQLDVKFIRDFQKRGYLCSAQCFDDKTSSSEQIQNCVERCQFPMQQLQNVIQQELQSFQNRLQRCAMDCQDRARDSIPI--NEKVDHMTQSRMQKEMEACVGQCVDKQIQCIPTLQKRL 131
BLAST of NO06G02480 vs. NCBI_GenBank
Match: XP_008879143.1 (hypothetical protein H310_13426 [Aphanomyces invadans] >ETV92179.1 hypothetical protein H310_13426 [Aphanomyces invadans]) HSP 1 Score: 94.0 bits (232), Expect = 4.100e-16 Identity = 43/131 (32.82%), Postives = 68/131 (51.91%), Query Frame = 0 Query: 5 QARLQAAVTASMDKLDRAYIRQLSKKAYSCMATCHDQSSYTSQDIQQCVGACSMGLQEVNALIGNELQYFQNRLQRCQQSCEDEVRDAQAKMGGGKPDPSQQTKLQGVYDKCVGKCIDSHLPLINAMESKL 136 +A + AV M+ LD+ R L K Y C C D +S+ +Q C+ C + +V + E+Q FQNRLQRC C+D +D+ + +P SQ Q +KCV KC+D H+ L+ ++ ++ Sbjct: 3 EADINQAVNKMMESLDKGTFRPLQKNGYVCSVKCFDNKDISSEQLQHCIERCQQPMAQVQNYLSQEMQSFQNRLQRCAMDCQDRAQDSLS----SQPSESQIATAQAGMEKCVSKCVDGHIKLLPTLKKRI 129
BLAST of NO06G02480 vs. NCBI_GenBank
Match: XP_009836327.1 (hypothetical protein H257_11172 [Aphanomyces astaci] >ETV74221.1 hypothetical protein H257_11172 [Aphanomyces astaci]) HSP 1 Score: 93.6 bits (231), Expect = 5.400e-16 Identity = 42/131 (32.06%), Postives = 70/131 (53.44%), Query Frame = 0 Query: 5 QARLQAAVTASMDKLDRAYIRQLSKKAYSCMATCHDQSSYTSQDIQQCVGACSMGLQEVNALIGNELQYFQNRLQRCQQSCEDEVRDAQAKMGGGKPDPSQQTKLQGVYDKCVGKCIDSHLPLINAMESKL 136 +A + AV M+ LD+ R L + AY C C D +++ +Q C+ C + +V + E+Q FQNRLQRC C+D +D+ + +P SQ + Q +KCV KC+D H+ L+ ++ ++ Sbjct: 3 EADINQAVAKMMESLDKGTFRPLQRNAYVCSVKCFDNKDVSAEQLQHCIERCQQPMAQVQNYMSQEMQTFQNRLQRCAMECQDRAKDSLS----SQPSESQISAAQAGMEKCVSKCVDGHIKLLPTLKKRI 129
BLAST of NO06G02480 vs. NCBI_GenBank
Match: CCI45810.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 92.8 bits (229), Expect = 9.200e-16 Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 0 Query: 16 MDKLDRAYIRQLSKKAYSCMATCHDQSSYTSQDIQQCVGACSMGLQEVNALIGNELQYFQNRLQRCQQSCEDEVRDAQAKMGGGKPDPSQQTKLQGVYDKCVGKCIDSHLPLINAMESKL 136 M++LD +IR K+ Y C A C D + +S+ IQ CV C +Q++ +I ELQ FQNRLQRC C+D RD+ K D Q+++Q + CVG+C+D + I ++ +L Sbjct: 2 MEQLDVKFIRDFQKRGYLCSAQCFDDKTSSSEQIQNCVERCQFPMQQLQNVIQQELQSFQNRLQRCAMDCQDRARDSIPI--NEKVDHMTQSRMQKEMEACVGQCVDKQIQCIPTLQKRL 119
BLAST of NO06G02480 vs. NCBI_GenBank
Match: XP_005094393.1 (PREDICTED: protein FAM136A-like [Aplysia californica]) HSP 1 Score: 92.4 bits (228), Expect = 1.200e-15 Identity = 43/142 (30.28%), Postives = 80/142 (56.34%), Query Frame = 0 Query: 1 MSDPQARLQAAVTASMDKLDRAYIRQLSKKAYSCMATCHDQSSYTSQDIQQCVGACSMGLQEVNALIGNELQYFQNRLQRCQQSCEDEVRDAQAKMGGGKPDPSQQTKLQGVYDKCVGKCIDSHLPLINAMESKLAGECKRR 143 M QAR+Q A++ ++ LD +R++ Y+C A C + Y+ ++Q+C+ CS+ + A + NE++ FQNRLQRC SC+D+++D +P + + + ++CV +C DSH+ L+ + K+ K++ Sbjct: 1 MDGAQARVQEAISKMVNTLDTGCLRKMQVDMYNCSAKCCENPKYSLDEVQKCIEDCSLDVNRAQAYLQNEIESFQNRLQRCAMSCQDKLKDQMPV----QPSDADVQRGRSSLEQCVVQCADSHVGLVPDLTKKMLETLKKK 138
BLAST of NO06G02480 vs. NCBI_GenBank
Match: XP_002601822.1 (hypothetical protein BRAFLDRAFT_121154 [Branchiostoma floridae] >EEN57834.1 hypothetical protein BRAFLDRAFT_121154 [Branchiostoma floridae]) HSP 1 Score: 92.0 bits (227), Expect = 1.600e-15 Identity = 46/118 (38.98%), Postives = 73/118 (61.86%), Query Frame = 0 Query: 1 MSDPQARLQAAVTASMDKLDRAYIRQLSKKAYSCMATCHDQSSYTSQDIQQCVGACSMGLQEVNALIGNELQYFQNRLQRCQQSCEDEVRDAQAKMGGGKPDPSQQTKLQGVYDKCVG 119 M+D QAR++ +V + ++R YIR++ K + C ATC D SS + D+ +C+ CS L L+ NEL FQ+RLQRC ++C+D+V+D KM G + Q +L G+ ++C+G Sbjct: 1 MADAQARVEESVKTLVTDIERDYIRKMQSKMFKCSATCCDDSSASMDDVGRCIDRCSQPLSRSQQLVTNELNEFQSRLQRCARTCQDQVQD---KMKAGN---TNQAELTGMMEQCIG 112
BLAST of NO06G02480 vs. NCBI_GenBank
Match: XP_021375503.1 (protein FAM136A-like [Mizuhopecten yessoensis] >OWF55055.1 hypothetical protein KP79_PYT17038 [Mizuhopecten yessoensis]) HSP 1 Score: 92.0 bits (227), Expect = 1.600e-15 Identity = 44/135 (32.59%), Postives = 73/135 (54.07%), Query Frame = 0 Query: 1 MSDPQARLQAAVTASMDKLDRAYIRQLSKKAYSCMATCHDQSSYTSQDIQQCVGACSMGLQEVNALIGNELQYFQNRLQRCQQSCEDEVRDAQAKMGGGKPDPSQQTKLQGVYDKCVGKCIDSHLPLINAMESKL 136 M QAR+Q AVTA ++L++ IR + + Y C C + SY+ +D C+ CS + ++ + +E++ +QNRLQRC C+D+ RD P K++G +KC+ C DSH+ L+ M ++ Sbjct: 1 MEAAQARVQNAVTARSEELEKGQIRSVEAEMYKCNLKCVENQSYSVEDKDHCLERCSSRMMQIQKYVQSEMEAYQNRLQRCAMDCQDKARDKMP----ASPKDGVVDKIRGELEKCMINCADSHVELVGPMFKRM 131
BLAST of NO06G02480 vs. NCBI_GenBank
Match: XP_009537213.1 (hypothetical protein PHYSODRAFT_431768, partial [Phytophthora sojae] >EGZ07647.1 hypothetical protein PHYSODRAFT_431768, partial [Phytophthora sojae]) HSP 1 Score: 90.5 bits (223), Expect = 4.600e-15 Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 0 Query: 6 ARLQAAVTASMDKLDRAYIRQLSKKAYSCMATCHDQSSYTSQDIQQCVGACSMGLQEVNALIGNELQYFQNRLQRCQQSCEDEVRDAQAKMGGGKPDPSQQTKLQGVYDKCVGKCIDSH---LPLINAMESKLAGECKRR 143 ++LQ AV +D+LDR+ +R + + Y C A + S++S + V C M Q++N + E+Q FQ+R+QR Q C+D +D+ GG P+ +Q + Q +KCV C+D+H LP INA + + K++ Sbjct: 4 SKLQDAVNKMVDRLDRSVLRGMQRDGYLCAAKVFENKSWSSDQLAAAVERCQMPTQQINQFMQQEMQNFQHRIQRGVQDCQDRAQDSLP--AGGAPNEAQIARAQKEMEKCVSSCVDAHIKLLPNINARIEQAVAQVKQQ 141 The following BLAST results are available for this feature:
BLAST of NO06G02480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02480 ID=NO06G02480|Name=NO06G02480|organism=Nannochloropsis oceanica|type=gene|length=638bpback to top protein sequence of NO06G02480.1 >NO06G02480.1-protein ID=NO06G02480.1-protein|Name=NO06G02480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=144bpback to top Synonyms
Publications
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