NO06G02440, NO06G02440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02440 vs. NCBI_GenBank
Match: XP_009032527.1 (hypothetical protein AURANDRAFT_19143 [Aureococcus anophagefferens] >EGB12903.1 hypothetical protein AURANDRAFT_19143 [Aureococcus anophagefferens]) HSP 1 Score: 92.0 bits (227), Expect = 4.400e-15 Identity = 76/319 (23.82%), Postives = 160/319 (50.16%), Query Frame = 0 Query: 64 QYENMSMAGLQDAVGQLEQSTADARMSHSDAQAEQDAFHQEHTITIQSELRVATKALTEIQKQVEDLSTDHHLELRAYRDKLIALHYYHTLNLTSVASEREQLLGKEVEAHTSSVHMIQ-----IKQQLGQSSSSSFGSGHRTRTGDEGDRLQDCLTNECIHLQQSLESNLLDIEGVCTTRFAQLQKNLELRHMKEMHGMEERADQHRQELVQQHEAVIKKLQN-------YYQNVVEEQSQRLQAREHTRITAEAKANSDRIRSKKLEEAIDQLRQPLAVAILREAELKKAVKVRARDKASLRHTRSRLRFLDAKIQE 371 +Y++M + LQ+ V L+Q A + + Q E+D + IT + E++ + + +++E + +H +E+R Y K+ L Y H NL ++A E E + +E E H + + ++ +K +L + S+ +E ++ + +++ E L ++ C R QL +LELR +H +EER + H +L++ HE + + N YY ++ + + +++ + + KA +++ + + +L++PL VA+ AEL+ +K R +D+ SLR++R+RL+ L+ ++++ Sbjct: 26 EYDSMDLEMLQEVVPMLKQQLAKCTLDRNYVQLERDTIQMFYDIT-KGEVQDIERQIAAKDREMELMEDNHRVEVRVYLQKVKHLEYEHNNNLRNIAVEGEHFMTEEHENHDNRAYELKKTKKSLKLELAEREWSN---------AEEIKQVXQQHAKNLLKMREGFEGQLGELSDRCGKRLEQLAADLELRRKVHVHEIEERKNLHINDLMRNHEKALGRAGNIQNDFNSYYNDITNDNLKLIKSLKDEVAEMKKKAVANQKLMHDISQENMRLKEPLTVAVAEVAELRAQLKDRQKDRLSLRNSRARLQVLEQQLRD 334
BLAST of NO06G02440 vs. NCBI_GenBank
Match: CBN74708.1 (PF2 [Ectocarpus siliculosus]) HSP 1 Score: 88.2 bits (217), Expect = 6.400e-14 Identity = 72/299 (24.08%), Postives = 148/299 (49.50%), Query Frame = 0 Query: 73 LQDAVGQLEQSTADARMSHSDAQAEQDAFHQEHTITIQSELRVATKALTEIQKQVEDLSTDHHLELRAYRDKLIALHYYHTLNLTSVASEREQLLGKEVEAH-TSSVHMIQIKQQLGQSSSSSFGSGHRTRTGDEGDRLQDCLTNECIHLQQSLESNLLDIEGVCTTRFAQLQKNLELRHMKEMHGMEERADQHRQELVQQHEAVIKKLQNYYQNVVEEQSQRLQAREHTRITAEAKANSDRIRSKKLEEAIDQLRQPLAVAILREAELKKAVKVRARDKASLRHTRSRLRFLDAKIQE 371 LQ+ V L+Q + + + Q E+D + IT Q E++ + +++E + +H +E+R Y K+ L Y H NL S+ + EQLLG E + H S + + K+ + + +E +++ +++ E +L ++ C R A L+ +LELR ++H +EER + H +L++ HE +++ YY ++ + + +++ + + + KA +++ + +L +PL VA+ AEL ++ + +D+ SL + ++RLR +D ++ E Sbjct: 36 LQEVVPMLKQQLEKSMLDRNYVQLERDTIQTFYDITHQ-EVKTMELKTSAKDREMELMEDNHRVEVRVYVQKVKHLEYEHQNNLKSITMDGEQLLGGEGDLHGNRSSELHRAKKDIKSEVEERY-----LLNAEEIAQVKKAHGKTLTKMREGFEVSLSELRARCDARLASLEDDLELRRKVDIHEIEERKNLHINDLMKNHEKAFGQMKAYYNDITNDNLKLIRSLKDELVEMKKKAVANQKLMLDISHENKRLSEPLTVALTDVAELHAHLRGQEKDRMSLTNAKARLRVIDEQLSE 328
BLAST of NO06G02440 vs. NCBI_GenBank
Match: OMJ66940.1 (hypothetical protein SteCoe_36040 [Stentor coeruleus]) HSP 1 Score: 69.3 bits (168), Expect = 3.100e-8 Identity = 67/297 (22.56%), Postives = 139/297 (46.80%), Query Frame = 0 Query: 68 MSMAGLQDAVGQLEQSTADARMSHSDAQAEQDAFHQEHTITIQSELRVATKALTEIQKQVEDLSTDHHLELRAYRDKLIALHYYHTLNLTSVASEREQLLGKEVEAHTSSVHMIQIKQQLGQSSSSSFGSGHRTRTGDEGDRLQDCLTNECIHLQQSLESNLLDIEGVCTTRFAQLQKNLELRHMKEMHGMEERADQHRQELVQQHEAVIKKLQNYYQNVVEEQSQRLQAREHTRITAEAKANSDRIRSKKLEEAIDQLRQPLAVAILREAELKKAVKVRARDKASLRHTRSRLRFL 365 M +A LQ + Q D ++ + Q E+D Q + +T + + + ++E L DH +E++ Y K+ L Y H +L + + ++ + +EV H ++ + +I ++ + + + R E + Q L +++S + ++ IE + + L++NLELR E+H +EER ++HR EL+ +HE + +++YY ++ ++++ + + E +I L++ D L+ PL A +L+ + DK SL + + L+ L Sbjct: 29 MDIATLQREIEVWRQKHFDTKVLRNKNQNEKDLIKQFYDVT-KRNVEETGSLIRNKDTEMEKLEDDHRVEVKVYMQKIKHLEYDHQTSLKKLEIDSKEAVKEEVNYHYTTENKAKIYKKDLKKQINEMELSNVYRVQKEMEAYQMGLE----AIKKSNDDKIIGIEAIYKQKLQTLKENLELRLKVEIHEVEERKNKHRNELMVKHEKAFRNIKDYYNDITRGNLEKIRELKEEKKKLEQNQTDHKIAIDDLKKENDTLKNPLEDAKAELNKLEDRLTNYNLDKVSLFNAKKHLKTL 320
BLAST of NO06G02440 vs. NCBI_GenBank
Match: OMJ94824.1 (hypothetical protein SteCoe_1843 [Stentor coeruleus]) HSP 1 Score: 69.3 bits (168), Expect = 3.100e-8 Identity = 67/305 (21.97%), Postives = 144/305 (47.21%), Query Frame = 0 Query: 68 MSMAGLQDAVGQLEQSTADARMSHSDAQAEQDAFHQEHTITIQSELRVATKALTEIQKQVEDLSTDHHLELRAYRDKLIALHYYHTLNLTSVASEREQLLGKEVEAHTSSVHMIQIKQQLGQSSSSSFGSGHRTRTGDEGDRLQDCLTNECIHLQQSLESNLLDIEGVCTTRFAQLQKNLELRHMKEMHGMEERADQHRQELVQQHEAVIKKLQNYYQNVVEEQSQRLQAREHTRITAEAKANSDRIRSKKLEEAIDQLRQPLAVAILREAELKKAVKVRARDKASLRHTRSRLRFLDAKIQEAE 373 M +A LQ + Q D ++ + Q E+D Q + +T + + + ++E L DH +E++ Y K+ L Y H +L + + ++ + +EV H ++ + +I ++ + + + R E + Q L +++S + ++ IE + + L++NLELR E+H +EER ++HR EL+ +HE + +++YY ++ ++++ + + E +I L++ D L+ PL A +L+ + DK SL + + L+ L ++++ + Sbjct: 29 MDIATLQREIEVWRQKHFDTKVLRNKNQNEKDLIKQFYDVT-KRNVEETGSLIRNKDTEMEKLEDDHRVEVKVYMQKIKHLEYDHQTSLKKLEIDSKEAVKEEVNYHYTTENKAKIYKKDLKKQINEMELSNVYRVQKEMEAYQMGLE----AIKKSNDDKIIGIEAIYKQKLQTLKENLELRLKVEIHEVEERKNKHRNELMVKHEKAFRNIKDYYNDITRGNLEKIRELKEEKKKLEQNQTDHKIAIDDLKKENDTLKNPLEDAKAELNKLEDRLTNYNLDKVSLFNAKKHLKTLLYQLEKCK 328
BLAST of NO06G02440 vs. NCBI_GenBank
Match: XP_002766804.1 (Growth-arrest-specific protein, putative [Perkinsus marinus ATCC 50983] >EEQ99521.1 Growth-arrest-specific protein, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 66.2 bits (160), Expect = 2.600e-7 Identity = 66/312 (21.15%), Postives = 144/312 (46.15%), Query Frame = 0 Query: 58 DFSVNQQYENMSMAGLQDAVGQLEQSTADARMSHSDAQAEQDAFHQEHTITIQSELRVATKALTEIQKQVEDLSTDHHLELRAYRDKLIALHYYHTLNLTSVASEREQLLGKEVEAHTSSVHMIQIKQQLGQSSSSSFGSGHRTRTGDEGDRLQDCLTNECIHLQQSLESNLLDIEGVCTTRFAQLQKNLELRHMKEMHGMEERADQHRQELVQQHEAVIKKLQNYYQNVVEEQSQRLQAREHTRITAEAKANSDRIRSKKLEEAIDQLRQPLAVAILREAELKKAVKVRARDKASLRHTRSRLRFLDAKIQ 370 D + Q +++ LQ+ + E A + + E+D ++ +TIT + E+ A+ ++Q E + +H ++++ + K+ +L Y+ T + E E L+ +E + H + ++ + ++ S S R +E ++ L+++ E N +E C L ++LE+R E+H M ER + H EL + H ++++ YYQ++ ++ + +Q+ + + +++ R +L L +PLA A+L + +K + DK +L + R R L+ +++ Sbjct: 20 DDIIPQDLLDLTEPQLQEKIESWEYRRNKAATERNYMEMERDLVNRFYTIT-KREIEQLEAAILCKERQTEVVEKEHRVKMKVHEHKVHSLVYHQTRENEDITKEAEALIMEEDDRH---IKLLTQWHEENEALKESLQSKKLARE-EEVKLMERGFAKSLEKLKETYECNQAQLEEECRDEVENLGRDLEVRRRVEIHEMRERKNLHMNELTENHNEAFEQIKGYYQDITQDNVKLIQSMKDEIALMRDREKANKERMTQLIAENKTLSEPLAEKEEERAKLMELLKNYSTDKIALENLRGRRAMLEKRLK 326 The following BLAST results are available for this feature:
BLAST of NO06G02440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02440 ID=NO06G02440|Name=NO06G02440|organism=Nannochloropsis oceanica|type=gene|length=1212bpback to top protein sequence of NO06G02440.1 >NO06G02440.1-protein ID=NO06G02440.1-protein|Name=NO06G02440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=404bpback to top Synonyms
Publications
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