NO06G02370, NO06G02370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02370 vs. NCBI_GenBank
Match: EWM26242.1 (hypothetical protein Naga_100025g64 [Nannochloropsis gaditana]) HSP 1 Score: 273.1 bits (697), Expect = 1.000e-69 Identity = 151/285 (52.98%), Postives = 183/285 (64.21%), Query Frame = 0 Query: 1 MPRFNLLPP--ASLLMLLLLLGPSPISQAFPISGYFSPRQRAFLWRAQAGAECFDDDNGSLPLFRLYFQGEFDNAAQVVSERAQGIEAGPAGGHEQIHCILTPLDLPAGSFGGDAQFFLGATYYFDGRPEAVFRCRVYSFHXXXXXXXXXXXXXXXXXXXXXXXXFLEMRLHRFTPEFEGMMRQNKYDLNLLPQTQVELAEVVEELEGCSVIWSVSNFKTSDEED-------------DGVSFRGVMRDGFCLVQSQRDAGIQLKIEDDLLLTREMLCVNDRGTD 271 +PR NLLPP A L +LLLL P ++AF + ++A WR Q GA +D +G L FR +FQGEFDNA QV SERAQGIEAG GGHEQIHC+L PL+L G G D+ F +GATYYFDGRP+AVFRCRVYSFH X F EMRLHRFTP+FE +MR+N YD+ LL + +LA+VVEEL GCS++WSV + +D G F+G MR+GFCLV SQR+A ++LKIEDDLLLT +ML VNDRGTD Sbjct: 32 LPRHNLLPPLAAVLCLLLLLSRPDATTEAFVLH-----LRQAKQWRIQGGATTTEDGDGLLSHFRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHCVLEPLELAHGVLGNDSLFCVGATYYFDGRPDAVFRCRVYSFH-PPPXSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRKNNYDMRLLQEPCNQLAQVVEELTGCSILWSVCTERIVIGQDIVGNGEGERPEVVHGARFQGEMREGFCLVDSQREANVRLKIEDDLLLTADMLSVNDRGTD 310
BLAST of NO06G02370 vs. NCBI_GenBank
Match: EJK75900.1 (hypothetical protein THAOC_02359 [Thalassiosira oceanica]) HSP 1 Score: 90.9 bits (224), Expect = 7.300e-15 Identity = 82/300 (27.33%), Postives = 122/300 (40.67%), Query Frame = 0 Query: 25 SQAFPISGYFSPRQRAFLWRAQAGAECFDDDNGSLPLFRLY---FQGEFDNAAQVVSERAQGIEAGPAGGHEQIHCILTPLDLPAGSFGGDAQ------FFLGATYYFDGRPEAVFRCRVYSFHXXXXXXXXXXXXXXXXXXXXXXXXFLEMRLHRFTPEFEGMMR---------------------QNKYDLNLLPQTQVELAEVVEELEGCSVIWS-----------VSNFKTSDEEDDGVSF-------------RGVMRDGFCLVQSQRDAGIQLKIEDDLLLTREMLCVNDRGTD 271 S+A P S + RQR+ + R A D D S FR FQG+FDN QVV +R G+ G GGHE IHC L +P FG DA+ ++ A +YF+G P+ +FR R Y + M+L+ +P E +R + K+ +++P +Q + +V L+GC V+W + N SDE +D SF G + D ++ QR + I+D+L L + +NDRG D Sbjct: 42 SRASPHSNSKTARQRSTIVRTIARE--VDCDKSSGEYFRRLTSTFQGDFDNYNQVVLDRQHGLTPGAGGGHEHIHCTL----VPCPDFGDDAEGDTRRSRWILAAFYFNGNPQQIFRFRAYQL------------WAPDHDGMDDGSAVVRMKLNTLSPILEQALRKRSEEPCSWWRTAWKVWSGEDKKKFHEDIIPWSQF-IPSLVSPLQGCDVLWEEDWDAAKHSYLLDNAYNSDESNDITSFCDTSFHATMEAGSSGAIVDSISMIPGQR-----ILIKDELSLWEDKFWINDRGYD 317
BLAST of NO06G02370 vs. NCBI_GenBank
Match: OSX78305.1 (hypothetical protein BU14_0112s0004, partial [Porphyra umbilicalis]) HSP 1 Score: 85.1 bits (209), Expect = 4.000e-13 Identity = 56/150 (37.33%), Postives = 68/150 (45.33%), Query Frame = 0 Query: 62 FRLYFQGEFDNAAQVVSERAQGIEAGPAGGHEQIHCILTPLDLPAGSFGGDAQFFLGATYYFDGRPEAVFRCRVYSFHXXXXXXXXXXXXXXXXXXXXXXXXFLEMRLHRFTPEFEGMMRQNKYDLNLLPQTQVELAEVVEELEGCSVIW 212 F +F G+FDN QVV ERA G+ GGHE IHC LT L GD F A YYF+G P VFR R+Y LEMR++R E E +R YD+ L T A+V + L+GC V W Sbjct: 14 FLAWFAGDFDNHEQVVEERAAGLSPREGGGHEHIHCTLTSL--------GDGWLF--AKYYFNGDPSVVFRSRLY----------------RVLPVVESPVGLLEMRIYRLFAEAEASLRATGYDVRGLSFTD---ADVYDWLQGCEVYW 134
BLAST of NO06G02370 vs. NCBI_GenBank
Match: OEU19745.1 (hypothetical protein FRACYDRAFT_235801 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 82.0 bits (201), Expect = 3.400e-12 Identity = 63/238 (26.47%), Postives = 93/238 (39.08%), Query Frame = 0 Query: 65 YFQGEFDNAAQVVSERAQGIEAGPAGGHEQIHCILTPLDLPAGSFGGDAQFFLGATYYFDGRPEAVFRCRVYSFHXXXXXXXXXXXXXXXXXXXXXXXXFLEMRLHRFTPEFEGMMRQNKYDLNLLPQ----------------------TQVELAEVVEELEGCSVIWS----------VSNFKTSDEEDDGVSFRGVMRDGFCLVQSQRDAGIQLKIEDDLLLTREMLCVNDRGTD 271 +FQG+FDN AQVV +R G+ GGHE HC L P+ + A ++FDG P +FR R Y +EMRL+ PE E +++ + D P + V L C ++WS +S+ D+E + +S VM G +V S G+Q++I D L L + + +NDRG D Sbjct: 99 WFQGDFDNYAQVVEDRKNGLLPREGGGHEHFHCTLVPV----------TESTRLAAFFFDGNPNRIFRFRYYEL--------LTPTIINDVDHQHSNNVTVEMRLNTLHPELEQLLKSHSTDPLSWPDIFKNFQHEGVSSXXXXXXXXXXXXXXXNQKVIPLSKCEIVWSFDKDPIQHSYISSDDGKDDEAENMSLHAVMVHGEQVVNSTIVPGMQIRILDQLSLYQHVFYINDRGFD 318
BLAST of NO06G02370 vs. NCBI_GenBank
Match: XP_002183185.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45403.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 77.4 bits (189), Expect = 8.300e-11 Identity = 67/212 (31.60%), Postives = 91/212 (42.92%), Query Frame = 0 Query: 66 FQGEFDNAAQVVSERAQGIEAGPAGGHEQIHCILTPLDLPAGSFGGDAQFFLGATYYFDGRPEAVFRCRVYSFHXXXXXXXXXXXXXXXXXXXXXXXXFLEMRLHRFTPEFEGMMRQNKYDLNLLPQTQVELAEV--VEELEGCSVIWS-----VSNFKTSDEEDDGVSFRGVMRDGFCLVQSQRDAGIQLKIEDDLLLTREMLCVNDRGTD 271 FQG+FDN QV+ +R +G+ GGHE IHC L P+ A A +YFDG P A+FR R Y ++ LH PE E +R+ D + P E V+ L C V WS V + DE +G+ VM G LV+SQ G ++ I+D L L + L ++DRG D Sbjct: 70 FQGDFDNYNQVIHDRKKGLLPREGGGHEHIHCSLVPVSETARL----------AAFYFDGVPGAIFRFRFYDL-------------------IPVDESTIDTVLHTLHPELERRLRRCP-DPSSWPLFFEEFGVKGRVQLLPKCDVRWSWVLDPVQHDYALDEGPNGL--HAVMVHGEALVESQMMPGQKILIKDQLSLWPDELWIHDRGFD 249
BLAST of NO06G02370 vs. NCBI_GenBank
Match: KOO29974.1 (hypothetical protein Ctob_013023 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 72.0 bits (175), Expect = 3.500e-9 Identity = 64/224 (28.57%), Postives = 94/224 (41.96%), Query Frame = 0 Query: 59 LPLFRLYFQGEFDNAAQVVSERAQGIEAGPAGGHEQIHCILTPL---DLPAGSFGGDAQFFLGATYYFDGRPEAVFRCRVYSFHXXXXXXXXXXXXXXXXXXXXXXXXFLEMRLHRFTPEFEGMMRQNKYDLNLLPQTQVELAEVVEELEGCSVIWSVS---NFKTSDEEDD------GVSFRGVMRDGFCLVQSQRDAGIQLKIEDDLLLTREMLCVNDRGTD 271 L F +G FDN QV +E+ G+ GGHE IHC L P+ D P G ++ A+YYF+G P+AVFR R+Y+ L R P+F +R Y + L ++ + + V WS + + E D G F G MR + S+R +G +++ DD+ L ++ L VNDR TD Sbjct: 29 LSRFXXXXRGHFDNHEQVETEKLAGLTPREGGGHEHIHCSLQPVTLHDRPQGQ-------YVLASYYFNGDPDAVFRERLYAID----------------------------ELPR-DPQFGTCVRMRIYKMRLSTAERLRAGMTLND-----VAWSAAEDLHASLHVPEADVFWRWCGERFEGSMRTQSIEIISER-SGRAIRVRDDVALWQDALWVNDRATD 210 The following BLAST results are available for this feature:
BLAST of NO06G02370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02370 ID=NO06G02370|Name=NO06G02370|organism=Nannochloropsis oceanica|type=gene|length=972bpback to top protein sequence of NO06G02370.1 >NO06G02370.1-protein ID=NO06G02370.1-protein|Name=NO06G02370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=299bpback to top Synonyms
Publications
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