NO06G02330, NO06G02330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02330 vs. NCBI_GenBank
Match: EWM26221.1 (Uncharacterized protein family UPF0136, Transmembrane [Nannochloropsis gaditana]) HSP 1 Score: 186.0 bits (471), Expect = 6.700e-44 Identity = 93/119 (78.15%), Postives = 106/119 (89.08%), Query Frame = 0 Query: 1 MYSFCITLPYSGMVAVGGVIGYVNKNSMPSLLAGLGLGGALALLGCGELAEYKKTGTVTKKWTLLSLLLSGGMTAAMGMKCAKSKGSLATAIFAGTSGLVSLFLAYRVMVPVPPKKEKK 120 MYSFCIT+PYSG+VA+GG+IGYV S+PSLLAGLGLG LA+LG GEL EYKKT VT+KWTLLSLL+SGGMT AMG+KCAK+KGSLA AIFA TSGLVS+FL YRV+VPVPPKK+KK Sbjct: 1 MYSFCITIPYSGIVALGGIIGYVKAGSLPSLLAGLGLGSGLAMLGYGELQEYKKTQAVTRKWTLLSLLVSGGMTIAMGLKCAKTKGSLAPAIFASTSGLVSVFLMYRVVVPVPPKKDKK 119
BLAST of NO06G02330 vs. NCBI_GenBank
Match: OQR96032.1 (H/ACA ribonucleoprotein complex subunit [Thraustotheca clavata]) HSP 1 Score: 94.4 bits (233), Expect = 2.600e-16 Identity = 47/109 (43.12%), Postives = 70/109 (64.22%), Query Frame = 0 Query: 1 MYSFCITLPYSGMVAVGGVIGYVNKNSMPSLLAGLGLGGALALLGCGELAEYKKTGTVTKKWTLLSLLLSGGMTAAMGMKCAKSKGSLATAIFAGTSGLVSLFLAYRVM 110 MY FC+TLPY G +A+GG++GYVN S+ SL AGLG G L L G +EY+++ V+K W+ LSL +S +T MG++ ++ + AGTS +SLF Y+++ Sbjct: 213 MYDFCLTLPYGGAIALGGLVGYVNSGSVISLTAGLGAGSLLLLFGTVSYSEYQQSPKVSKLWSGLSLGVSSVLTVVMGLRYKETNSLFPAGVVAGTSAAMSLFYVYKLL 321
BLAST of NO06G02330 vs. NCBI_GenBank
Match: XP_008611148.1 (hypothetical protein SDRG_07108 [Saprolegnia diclina VS20] >EQC35398.1 hypothetical protein SDRG_07108 [Saprolegnia diclina VS20]) HSP 1 Score: 91.3 bits (225), Expect = 2.200e-15 Identity = 45/108 (41.67%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 1 MYSFCITLPYSGMVAVGGVIGYVNKNSMPSLLAGLGLGGALALLGCGELAEYKKTGTVTKKWTLLSLLLSGGMTAAMGMKCAKSKGSLATAIFAGTSGLVSLFLAYRV 109 MY FC+TLPY G +A+GG++GYVN S+ SL AGLG G L L G EY+++ ++K W+ LSL +S +T MG++ ++ + AGTS +S F Y++ Sbjct: 1 MYDFCLTLPYGGAIALGGLVGYVNSGSVISLTAGLGAGSLLLLFGTASYQEYQQSPKISKLWSGLSLGVSSVLTVVMGLRYKETNSLFPAGVVAGTSAAMSAFYLYKL 108
BLAST of NO06G02330 vs. NCBI_GenBank
Match: XP_012204491.1 (hypothetical protein SPRG_09677 [Saprolegnia parasitica CBS 223.65] >KDO24844.1 hypothetical protein SPRG_09677 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 91.3 bits (225), Expect = 2.200e-15 Identity = 45/108 (41.67%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 1 MYSFCITLPYSGMVAVGGVIGYVNKNSMPSLLAGLGLGGALALLGCGELAEYKKTGTVTKKWTLLSLLLSGGMTAAMGMKCAKSKGSLATAIFAGTSGLVSLFLAYRV 109 MY FC+TLPY G +A+GG++GYVN S+ SL AGLG G L L G EY+++ ++K W+ LSL +S +T MG++ ++ + AGTS +S F Y++ Sbjct: 1 MYDFCLTLPYGGAIALGGLVGYVNSGSVISLTAGLGAGSLLLLFGTASYQEYQQSPKISKLWSGLSLGVSSVLTVVMGLRYKETNSLFPAGVVAGTSAAMSAFYLYKL 108
BLAST of NO06G02330 vs. NCBI_GenBank
Match: OQR94249.1 (hypothetical protein ACHHYP_01524 [Achlya hypogyna]) HSP 1 Score: 88.6 bits (218), Expect = 1.400e-14 Identity = 44/109 (40.37%), Postives = 67/109 (61.47%), Query Frame = 0 Query: 1 MYSFCITLPYSGMVAVGGVIGYVNKNSMPSLLAGLGLGGALALLGCGELAEYKKTGTVTKKWTLLSLLLSGGMTAAMGMKCAKSKGSLATAIFAGTSGLVSLFLAYRVM 110 MY FC+TLPY G +A+GG++GYVN S+ SL AGLG G L L G EY+++ ++K W+ LSL +S +T MG++ ++ + AGTS +S F +++ Sbjct: 1 MYDFCLTLPYGGAIALGGLVGYVNSGSVISLTAGLGAGSLLLLFGTASYQEYQQSPKISKIWSGLSLGVSSILTVVMGLRYKETNSLFPAGVVAGTSAAMSAFYVIKLL 109
BLAST of NO06G02330 vs. NCBI_GenBank
Match: XP_009833697.1 (hypothetical protein H257_09238 [Aphanomyces astaci] >ETV76785.1 hypothetical protein H257_09238 [Aphanomyces astaci]) HSP 1 Score: 83.2 bits (204), Expect = 6.100e-13 Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 0 Query: 1 MYSFCITLPYSGMVAVGGVIGYVNKNSMPSLLAGLGLGGALALLGCGELAEYKKTGTVTKKWTLLSLLLSGGMTAAMGMKCAKSKGSLATAIFAGTSGLVSLF 104 MY FC+TLPY +AVGG++GYVN S SL AG+G G L + G E++ + V+K W+ LSL +S ++ MG++ ++ + + AGTS +SLF Sbjct: 1 MYDFCLTLPYGAAIAVGGIVGYVNSGSSASLTAGVGAGTLLLIFGYASYQEFQSSPVVSKTWSALSLGVSSVLSVVMGLRYKDTQNFVPAGVIAGTSIGMSLF 103
BLAST of NO06G02330 vs. NCBI_GenBank
Match: XP_008868656.1 (hypothetical protein H310_05665 [Aphanomyces invadans] >ETW02051.1 hypothetical protein H310_05665 [Aphanomyces invadans]) HSP 1 Score: 80.5 bits (197), Expect = 3.900e-12 Identity = 41/103 (39.81%), Postives = 63/103 (61.17%), Query Frame = 0 Query: 1 MYSFCITLPYSGMVAVGGVIGYVNKNSMPSLLAGLGLGGALALLGCGELAEYKKTGTVTKKWTLLSLLLSGGMTAAMGMKCAKSKGSLATAIFAGTSGLVSLF 104 MY FC+TLPY +AVGG++GYVN S SL AG+G G L + G E++ + V+K W+ LSL +S ++ MG++ +++ + + A TS +SLF Sbjct: 1 MYDFCLTLPYGAAIAVGGIVGYVNSGSSASLTAGVGAGTLLLVFGYASYQEFQSSPIVSKTWSALSLGVSAVLSVVMGLRYKETQNFVPAGLIASTSIGMSLF 103
BLAST of NO06G02330 vs. NCBI_GenBank
Match: GAX93850.1 (Hypothetical protein PINS_001756, partial [Pythium insidiosum]) HSP 1 Score: 79.0 bits (193), Expect = 1.100e-11 Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = 0 Query: 1 MYSFCITLPYSGMVAVGGVIGYVNKNSMPSLLAGLGLGGALALLGCGELAEYKKTGTVTKKWTLLSLLLSGGMTAAMGMKCAKSKGSLATAIFAGTSGLVSLFLAYRVMVPVPPKKEKK 120 MY FC+T+PY ++ +GG+IGYVN S S++AG G L L+G EY ++ +K W LSL +S +T MG++ + A TS +SLF +++ PK +KK Sbjct: 14 MYDFCLTIPYGVLLGIGGLIGYVNSGSATSIIAGGASGVFLTLVGYASYQEYTQSPVTSKLWPGLSLAVSAPLTVVMGLRFQNTGAFFPAGFVAATSAXMSLFYLAKLVSNPKPKYKKK 132
BLAST of NO06G02330 vs. NCBI_GenBank
Match: CBJ26023.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 73.6 bits (179), Expect = 4.800e-10 Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 0 Query: 1 MYSFCITLPYSGMVAVGGVIGYVNKNSMPSLLAGLGLGGALALLGCGELAEYKKTGTVTKKWTLLSLLLSGGMTAAMGMKCAKSKGSLATAIFAGTSGLVSLFLAYRV 109 M+ FC+T+PY +V GG+IG++ S SL+AG G G L LLG G EYK GTV++ WT+ SL++S + M + K+ + +A + L++ F AY++ Sbjct: 1 MHDFCLTIPYGMIVMFGGIIGFLAAGSKASLMAGGGSGALLMLLGYGGYMEYKAKGTVSQLWTIASLVISNVIWVMMAKRFRKTGKIMPSAPLGILALLMAFFYAYQM 108
BLAST of NO06G02330 vs. NCBI_GenBank
Match: XP_024585636.1 (transmembrane protein 14c [Plasmopara halstedii] >CEG49267.1 transmembrane protein 14c [Plasmopara halstedii]) HSP 1 Score: 72.0 bits (175), Expect = 1.400e-9 Identity = 45/120 (37.50%), Postives = 66/120 (55.00%), Query Frame = 0 Query: 1 MYSFCITLPYSGMVAVGGVIGYVNKNSMPSLLAGLGLGGA-LALLGCGELAEYKKTGTVTKKWTLLSLLLSGGMTAAMGMKCAKSKGSLATAIFAGTSGLVSLFLAYRVMVPVPPKKEKK 120 MY FC+T+PY ++ VGGVIG++N S S+ AG GL GA L+ LG EYK++ +K W LSL +S +T MG + K+ A S +S+F + + P+ +KK Sbjct: 1 MYDFCLTIPYGMLLGVGGVIGFINTGSTMSVAAG-GLSGAILSFLGYCSYNEYKQSPVTSKLWPGLSLAVSTALTITMGNRYNKTNAFFPAGFLAAYSAGMSIFYVWVLTKKSKPQYKKK 119 The following BLAST results are available for this feature:
BLAST of NO06G02330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02330 ID=NO06G02330|Name=NO06G02330|organism=Nannochloropsis oceanica|type=gene|length=360bpback to top protein sequence of NO06G02330.1 >NO06G02330.1-protein ID=NO06G02330.1-protein|Name=NO06G02330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=120bpback to top Synonyms
Publications
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