NO06G02290, NO06G02290 (gene) Nannochloropsis oceanica

Overview
NameNO06G02290
Unique NameNO06G02290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1894
Alignment locationchr6:664972..666865 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:664972..666865 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR008906HATC_dom_C
Homology
The following BLAST results are available for this feature:
BLAST of NO06G02290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02290.1NO06G02290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02290.1NO06G02290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02290 ID=NO06G02290|Name=NO06G02290|organism=Nannochloropsis oceanica|type=gene|length=1894bp
TGGGGCTGTTCTGTGATTCTCCGACTGTCGGCGCAACATTCGATTTTCGA
TCTACTGGAGCGGCTCGCCAAATAATTAAAATTTCTTTCAAACGACTTAT
ACTGCATCCTGGAAGTGGGAGATAATCAAATAGGCGCAAGTGATCCAAGG
CGTATCCCCAGGTCTACAGAAGAATTGGGTTTGACGCGTCCAATAGATGT
CGATCGACTCACGTCACGTCATCCTGGCAAGTCTCACCGTTGACGTTTTT
TGACGTACGTATTGACAATGTGCAGACCAAACTCCATCTCCACTGAACTT
GGCATGTCGACGCCCCTCAACGCAGGCACGATTTCCTGACAGGCGTCTTG
GTCCGAAACCTCCTACCCTCTTATCTCATCAATGGTGACGGTTTTAAGGA
TTTTGTGTCCGCCATCCCCCCAATACAAGCTGCCGACGAACTGGACTGTG
CGCAAGTATACGGAAGCGATATTCGACTAACCCAAGGCGCTGACCTCCAA
GGCTGCCAGTAGTGCAGTATCTGGTTTGACCGCCTGCCTTGTCACAGATG
GATGGGCCACACGGAACGGAAGGTCGTACATCGGCACGTTTGCCGCTACG
CTGGACGACGAGTTCAGGGTTCGAACCATCTGCCTCGACATGACGGAGTG
CCAGAAGAAGCATCACACGGCCGCCGAGATCACCGGACTGCTGGCCAAGA
CGGTGGAGGATTTCGATAATTTGCCTGCAGCCGTCTACGAAGCACGACGC
TGGGTCCATCGTAAAGAAATgtgcgtgatcgtgacaattttaggtgtctc
attcatccaattctaatctcaaggtccacatagGCGTCCCCGAAGCTGGC
CTCAAGTCCTCCGCCTGTACACATGCAGCGTAAAATCATTAGCTTGATCA
GCACCGTCCCTGCGGGACACGTTTGCGGTGGCATCCCACCTCGACCCGCG
CTTCAAGGCGCTCTGCGATTACTACGTACCCGAGCAGCATGTAAAAGGAT
GCAAGCCTGCCTGCGCGTAGCACAGGGCACGGCCATCACGCAGTTCAAGG
ATGCGGGCACATACAGTGGCAGGGGCGCGAAGCAGGACGCAGAGGGCAGT
GGCATTGTCGACAACTTGGACCCCTTGGCCGCCGAGAATTTGGCCTCCAG
AAGCTGTATTCTAGGCGATAGGACGGAGAACATTCTCAACGTTGAGGAGG
TAACCCGTGATCTGGCCGAGTACATCCGCACGCCTGTCGAGCTTTCAAAG
ACATGCCTGCTGGAATGGTGGTGGCGCAATAAGCAGTCCTTCCCTGCCCT
GGCGGCGCTTGCGCGGCAGTACCTCTTAATACCTGCAATCTCCTTGGAGG
TTGAATGATATTTTTTTTTGCGTGCCCGTCGATCAGCCACCTTTGGACGC
GGCTGGGCATCCAGTCTATTCAGCAGACTCTGTTCCTCCAGCTGAATTGG
GACACTCGCATAACCACTGAGGTCACGGGCGCGGCTCTAGAGGAGGCCAA
AGAGGGCGACTAGGGGGATGGGATGATGAATATCGTGCATGATGACGGGC
CGAGCTATAAGGGGAAGGATCGTATAAATGAGGAGGAAGAACGCCGCTCT
CTTCCCCATCGGTTTCGAGGGCAAGAACTTCGCTTTCCTTGATGACAAGA
CCGAATATGGTGTGGCAGATTTCTCTTCGTCTTGATCGGAGCCACTTCGT
CCTTCTCCAAGGCAGATACGCATCATTCAACAACACGATCACGATCACCG
TGTCCATCGCAACCTATGTCAAGGCAGGGCTGGTTCTCTCGCCCCCACGA
GAGAATTTCTACAAGCCGAGTTGTTGCGAAGGAATGACAAGAAACGATAA
CATACCATAAAAATATAGCGAAAACAAAAGCATCGTTCAGCCAA
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protein sequence of NO06G02290.1

>NO06G02290.1-protein ID=NO06G02290.1-protein|Name=NO06G02290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=162bp
MQRKIISLISTVPAGHVCGGIPPRPALQGALRLLRTRAACKRMQACLRVA
QGTAITQFKDAGTYSGRGAKQDAEGSGIVDNLDPLAAENLASRSCILGDR
TENILNVEEVTRDLAEYIRTPVELSKTCLLEWWWRNKQSFPALAALARQY
LLIPAISLEVE*
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Synonyms
Publications