NO06G02260, NO06G02260 (gene) Nannochloropsis oceanica

Overview
NameNO06G02260
Unique NameNO06G02260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2367
Alignment locationchr6:658466..660832 +

Link to JBrowse

Properties
Property NameValue
DescriptionMeiotic recombination protein spo11 isoform 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:658466..660832 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0005524ATP binding
GO:0003677DNA binding
GO:0005524ATP binding
GO:0003824catalytic activity
GO:0003677DNA binding
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0000737DNA catabolic process, endonucleolytic
GO:0000737DNA catabolic process, endonucleolytic
GO:0006259DNA metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005694chromosome
GO:0005694chromosome
Vocabulary: INTERPRO
TermDefinition
IPR036078Spo11/TopoVI_A_sf
IPR013049Spo11/TopoVI_A_N
IPR002815Spo11/TopoVI_A
Homology
BLAST of NO06G02260 vs. NCBI_GenBank
Match: EWM26210.1 (meiotic recombination protein spo11 isoform 2 [Nannochloropsis gaditana])

HSP 1 Score: 554.3 bits (1427), Expect = 3.700e-154
Identity = 287/475 (60.42%), Postives = 340/475 (71.58%), Query Frame = 0
Query:    7 SGQPLFSSFLPPHLPARVLTSSNGKHRAYIQPN-SNVPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDITTQEVIDRIEEFIAAWIASFSNPAITEPPTFEVPRRNQSNSTYHKGATGGDDTDTMEQDRLPGLRQGSGMVVKKLK--GKG-ARSYAAIFAVLAFSHRVLLSGQIATSRELWYHYKTSRECFKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFRPLGSLMAWTECN-ASXXXXXXXXXXXXLIDSRWITEVMEIECAGGHRPRYVVVVEKECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLGLCDCNPHGIALLLTYKCGSLRMPESQLYRVPLRWLGVRPSQILQRFDLPDEVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMADEHMKCELEALNTFSGTEGRRDFLCQFVVSSLMSGDHLS 477
            S  P F    P   P+ +LTS+NGKH   +  + S+ P+                                        DI  +EVI RIEEFI AWIA+ S+  I+EPPTFEV RR ++NS Y+ G     ++      +LPGL+QG G+V+KKL   G+G ARSYAAIFA+LAFSHR+LLS Q+ATSRE+WY+YK S  CFK QADCDRAVLDAA+LLGVARHQLGIVGAAKGL AG+FRFR  GS  AW EC+               LIDS WIT+VME+EC G HRPRY+VVVEKEC+F+RL+GDGL   AGG+VLITGKGYPDLATRAC+KALVD + V V+GLCDCNPHGIALLLTYKCGS RMPESQ YR+PL WLG+RPSQ+ +RFDLPD+ FQ FSEGD  KC SL+ SPFCQAH  WREEVE MA EH+KCELEALNTFSG++GRRDFL Q+VVS+L+SGD+L+
Sbjct:   37 SNHPPFPPTSPVAQPSSLLTSANGKHNDDLSSSTSSFPN--------------------TTPFPARIDQSSHDASGVTHDIAREEVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGES----CQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTLIDSCWITDVMEVECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMPESQAYRIPLCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFLSQYVVSALLSGDYLT 487          
BLAST of NO06G02260 vs. NCBI_GenBank
Match: XP_008607094.1 (hypothetical protein SDRG_03242 [Saprolegnia diclina VS20] >EQC39822.1 hypothetical protein SDRG_03242 [Saprolegnia diclina VS20])

HSP 1 Score: 189.9 bits (481), Expect = 1.800e-44
Identity = 125/366 (34.15%), Postives = 183/366 (50.00%), Query Frame = 0
Query:   86 ITTQEVIDRIEEFIAAWIASFSNPAITEPPTFEVPRRNQSNSTYHKGATGGDDTDTMEQDRLPGLRQGSGMVVKKLKGKGARSYAAIFAVLAFSHRVLLSGQIATSRELWYHYKTSRECFKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFRPLGSLMAWTECNASXXXXXXXXXXXXLIDSRWITEVMEIECAGGHRPRYVVVVEKECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLGLCDCNPHGIALLLTYKCGSLRMP-ESQLYRVPLRWLGVRPSQILQRFDLPDEVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMADEHMKCELEALNT 451
            ++  E++ RI++   A++    N   T   TF   +R  S  T+        D D +       L  G      K+    AR Y  ++ VL  +H++LL  +  T REL+Y +      F SQ + D  +LD + LL V R  L I+G  KG F G   +R       W +C+ +             ++S  +T             +Y++VVEKE +F R LG+ L       +L+TGKG+PDLATR  +K L D   + VLGLCDCNP G+++LL++K GS RMP +S  Y V + W+G+RP       +LPD V   FS+ D R+ +SL A PF Q    +R EV+      +K ELEAL+T
Sbjct:    9 LSRAEILRRIQDVFQAFLEDLMNDTFT---TFHTLKRATSAMTF--------DCDALT------LSHGGEKRAIKMTSASARKYTGMWLVLQIAHQLLLEDKTVTQRELYYLH----PFFTSQQEADECILDVSGLLCVPRECLNIIGGVKGYFTGRLCYRSADK--QWIDCSLNGASGQPISRELLRLESEDMTS----------DAQYIIVVEKEGIFNR-LGEDLFYNRVPCILVTGKGFPDLATRIFVKKLRDTLRIPVLGLCDCNPFGLSILLSFKFGSARMPLDSVAYAVDMHWVGLRPLD-TALLELPDVVHTKFSKHDTRRLQSLTAHPFVQMDAAYRAEVQHWTKHPLKIELEALHT 339          
BLAST of NO06G02260 vs. NCBI_GenBank
Match: OQR86141.1 (hypothetical protein ACHHYP_10951 [Achlya hypogyna])

HSP 1 Score: 183.7 bits (465), Expect = 1.300e-42
Identity = 128/368 (34.78%), Postives = 183/368 (49.73%), Query Frame = 0
Query:   86 ITTQEVIDRIEEFIAAWIASFSNPAITEPPTFEVPRRNQSNSTYHKGATGGDDTDTMEQDRLPGLRQGSGMVVKKLKGKGARSYAAIFAVLAFSHRVLLSGQIATSRELWYHYKTSRECFKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFRPLGSLMAWTECNASXXXXXXXXXXXXLIDSR--WITEVMEIECAGGHRPRYVVVVEKECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLGLCDCNPHGIALLLTYKCGSLRMP-ESQLYRVPLRWLGVRPSQILQRFDLPDEVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMADEHMKCELEALNT 451
            +  +E+I RIEE   A++   ++   T   T              K AT   D D   Q     L         K+   GAR Y  ++ VL  +H++L   +  T REL+Y +      F +Q + D  +LD + LL V R  L IVG  KG F G   ++   +   W +C+               ++S    I  V  +  A     +YV+VVEKE +F R LG+ L       +L+TGKG+PDLATR  +K L D   V VLGLCDCNP G+++ L+YK GS RMP +S  Y V ++W+G+RP   +   +LP  V   FS+ D R+ + LLA PF Q + ++  EV+  A    K ELEAL+T
Sbjct:   11 LAREEIISRIEETFLAFLEGLASDTFTVFHTL-------------KRATNAMDFDCDAQT----LAHAGETRAIKMTTTGARKYTGMWLVLQIAHQLLRENKTVTQRELYYLH----PFFTTQQEADECILDVSGLLRVPRECLNIVGGVKGYFTGRICYQETNN--HWIDCSQDGGTGRPISRDILRLESHQMQIFGVFNLSDA-----KYVIVVEKEGIFNR-LGEDLFFNRVPCILVTGKGFPDLATRIFVKKLSDALRVPVLGLCDCNPFGLSIFLSYKFGSARMPLDSVAYAVDIKWVGLRPLDAM-ALELPKVVRTKFSKHDKRRLQGLLAHPFVQTNAQYGAEVDEWARLPQKIELEALHT 348          
BLAST of NO06G02260 vs. NCBI_GenBank
Match: XP_009824737.1 (hypothetical protein H257_02688 [Aphanomyces astaci] >ETV86265.1 hypothetical protein H257_02688 [Aphanomyces astaci])

HSP 1 Score: 182.2 bits (461), Expect = 3.800e-42
Identity = 118/329 (35.87%), Postives = 171/329 (51.98%), Query Frame = 0
Query:  150 LRQGSGMVVKKLKGKGARSYAAIFAVLAFSHRVLLSGQIATSRELWYHYKTSRECFKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFR--PLGSLMAWTECNASXXXXXXXXXXXXLIDSRWITEVMEIECAGGHRPRYVVVVEKECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLGLCDCNPHGIALLLTYKCGSLRMP-ESQLYRVPLRWLGVRPSQILQRFDLPDEVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMADEHMKCELEALNTFSGTEGRRDFLCQFVVSSLMSGDHL 476
            L  G  M   +L  +GAR Y  I+ VL  +H++LL  +  T REL+Y +      F+SQ + D ++LD    LGV R  L IVG  KG F G    +         W +C                +    I              R+++V+EK+ +   +  + L   A   +L+TGKG+PDLATR  +K L D   V VLGLCDCN  G+++LLTYK GS RMP +S  Y V ++WLG+RPSQ L+  +LP+ V +  +  D R+ +SL+  PF Q  P++R E++    +  K ELEAL+T         FL QFV  S++  D++
Sbjct:   47 LSHGGNMRTIRLNSQGARKYTGIWLVLQTAHQLLLEDKSITQRELYYLH----PFFESQKEADESILDTGGFLGVPRECLNIVGGVKGCFTGRMSIQVDHYYENGQWVDCAKDGPSGRPITRDILRLHHDQID------------ARFILVIEKDGI---MSAEDLFFDAMPCILVTGKGFPDLATRCFVKKLSDFLQVPVLGLCDCNSFGLSILLTYKFGSARMPLDSIHYAVDIQWLGLRPSQ-LEALELPNVVKKKCTNQDKRRMKSLMLHPFVQMQPQYRHEIDLWLADPYKVELEALHTKG-----FGFLGQFVQDSILHVDYI 350          
BLAST of NO06G02260 vs. NCBI_GenBank
Match: XP_008863706.1 (hypothetical protein H310_02090 [Aphanomyces invadans] >ETW07613.1 hypothetical protein H310_02090 [Aphanomyces invadans])

HSP 1 Score: 173.7 bits (439), Expect = 1.400e-39
Identity = 105/272 (38.60%), Postives = 152/272 (55.88%), Query Frame = 0
Query:  205 FKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFRPLGSLMAWTECNASXXXXXXXXXXXXLIDSRWIT-EVMEIECAGGHRPRYVVVVEKECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLGLCDCNPHGIALLLTYKCGSLRMP-ESQLYRVPLRWLGVRPSQILQRFDLPDEVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMADEHMKCELEALNTFSGTEGRRDFLCQFVVSSLMSGDH 475
            F+SQ + D  +LDA   LGV R  L IVG  KG F G    +  G    W +C+                  R IT +++ +E       ++++V+EK+ +F RL  D   D     +LITGKG+PDLATR  +K L D   V +LGLCDCN  G+++LLTYK GS RMP +S  Y V ++W+G+RPSQ+ +   LP+ V +  ++ D  + +SLL  PF Q HP ++ E+E    +  K ELEAL+T         FL QFV+ ++M+ D+
Sbjct:    5 FESQKEADECILDAGGFLGVPRECLNIVGGVKGAFTGRISIKENGQ---WVDCSKDGP------------SGRPITRDILRLE-HDDIDAKFILVIEKDGIFNRLSEDLFFDNL-PCILITGKGFPDLATRCFVKKLGDVLQVPILGLCDCNAFGLSILLTYKLGSARMPLDSIHYAVDIQWIGLRPSQV-EALALPNVVKKKCTKQDKLRTKSLLLHPFIQMHPNYQVEIELWLSDPFKVELEALHT-----NGFGFLGQFVLDAIMNADY 253          
BLAST of NO06G02260 vs. NCBI_GenBank
Match: ETK79829.1 (hypothetical protein L915_14321 [Phytophthora parasitica] >ETL33248.1 hypothetical protein L916_14226 [Phytophthora parasitica])

HSP 1 Score: 172.9 bits (437), Expect = 2.300e-39
Identity = 126/404 (31.19%), Postives = 197/404 (48.76%), Query Frame = 0
Query:   87 TTQEVIDRIEEFIAAWIASFSNPAITEPPTFEVPRRNQSNSTYHKGATGGDDTDTMEQDRLPGLRQGSGMVVKKLKGKGARSYAAIFAVLAFSHRVLLSGQIATSRELWYHYKTSRECFKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFRPLGSLMAWTECNASXXXXXXXXXXXXLIDSRW----------IT-EVMEIECAG-GHRPRYVVVVEKECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLGLCDCNPHGIALLLTYKCGSLRMP-ESQLYRVPLRWLGVRPSQILQRFDLPDEVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMADEHM--KCELEALNTFSGTEGRRDFLCQFVVSSLMSGDHL 476
            T ++++ RIE   A ++   S   + E    E  +R+ S   Y          D   Q +L     G+   + KL  +G R Y  I+ +L  +H +L   + AT R+++Y +      FK Q + D A+LDA ++LG+ R  + IV A KG F G             +  + +              D +W          IT E+++++          ++V+EK+ +F RL  D   +     +LITG+G+PDLATR  +  L +   + VLGLCDCNP G++++LTYK GS RMP ES  Y V ++W+GVRPSQI    DLP   F+  +  D     SL  S F QA+  +++EV+    + +  K ELEAL+    T     FL  F+ + +  G++L
Sbjct:   23 TREDILRRIEALAAEFLEILSTGKVLE---LEALKRDSSAMIY----------DHENQRQL----HGNDTRLIKLNRQGGRKYTGIWLILQTAHALLTENKTATQRDVYYLH----PFFKGQGEADEAILDAGSILGIPRDSMNIVAATKGCFTGDISVLVSLCFAMASHRHDTHFDIFCLFDFFGKRDGKWRHFGSGEEVSITHELLQLKPQEMKSNATCILVIEKDGIFNRLREDKFFEIVPS-ILITGRGFPDLATRVFVSLLRNALEIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAVDIKWVGVRPSQIAD-LDLPISSFKALTRKDLAVADSLFRSSFIQANDHFKDEVQMWLGDALPWKIELEALHVLGFT-----FLTSFLQACIEKGNYL 398          
BLAST of NO06G02260 vs. NCBI_GenBank
Match: XP_008910404.1 (hypothetical protein PPTG_23618 [Phytophthora parasitica INRA-310] >ETN04477.1 hypothetical protein PPTG_23618 [Phytophthora parasitica INRA-310] >ETP37672.1 hypothetical protein F442_14518 [Phytophthora parasitica P10297])

HSP 1 Score: 172.9 bits (437), Expect = 2.300e-39
Identity = 126/404 (31.19%), Postives = 197/404 (48.76%), Query Frame = 0
Query:   87 TTQEVIDRIEEFIAAWIASFSNPAITEPPTFEVPRRNQSNSTYHKGATGGDDTDTMEQDRLPGLRQGSGMVVKKLKGKGARSYAAIFAVLAFSHRVLLSGQIATSRELWYHYKTSRECFKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFRPLGSLMAWTECNASXXXXXXXXXXXXLIDSRW----------IT-EVMEIECAG-GHRPRYVVVVEKECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLGLCDCNPHGIALLLTYKCGSLRMP-ESQLYRVPLRWLGVRPSQILQRFDLPDEVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMADEHM--KCELEALNTFSGTEGRRDFLCQFVVSSLMSGDHL 476
            T ++++ RIE   A ++   S   + E    E  +R+ S   Y          D   Q +L     G+   + KL  +G R Y  I+ +L  +H +L   + AT R+++Y +      FK Q + D A+LDA ++LG+ R  + IV A KG F G             +  + +              D +W          IT E+++++          ++V+EK+ +F RL  D   +     +LITG+G+PDLATR  +  L +   + VLGLCDCNP G++++LTYK GS RMP ES  Y V ++W+GVRPSQI    DLP   F+  +  D     SL  S F QA+  +++EV+    + +  K ELEAL+    T     FL  F+ + +  G++L
Sbjct:  147 TREDILRRIEALAAEFLEILSTGKVLE---LEALKRDSSAMIY----------DHENQRQL----HGNDTRLIKLNRQGGRKYTGIWLILQTAHALLTENKTATQRDVYYLH----PFFKGQGEADEAILDAGSILGIPRDSMNIVAATKGCFTGDISVLVSLCFAMASHRHDTHFDIFCLFDFFGKRDGKWRHFGSGEEVSITHELLQLKPQEMKSNATCILVIEKDGIFNRLREDKFFEIVPS-ILITGRGFPDLATRVFVSLLRNALEIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAVDIKWVGVRPSQIAD-LDLPISSFKALTRKDLAVADSLFRSSFIQANDHFKDEVQMWLGDALPWKIELEALHVLGFT-----FLTSFLQACIEKGNYL 522          
BLAST of NO06G02260 vs. NCBI_GenBank
Match: ETP09573.1 (hypothetical protein F441_14559 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 172.9 bits (437), Expect = 2.300e-39
Identity = 126/404 (31.19%), Postives = 197/404 (48.76%), Query Frame = 0
Query:   87 TTQEVIDRIEEFIAAWIASFSNPAITEPPTFEVPRRNQSNSTYHKGATGGDDTDTMEQDRLPGLRQGSGMVVKKLKGKGARSYAAIFAVLAFSHRVLLSGQIATSRELWYHYKTSRECFKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFRPLGSLMAWTECNASXXXXXXXXXXXXLIDSRW----------IT-EVMEIECAG-GHRPRYVVVVEKECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLGLCDCNPHGIALLLTYKCGSLRMP-ESQLYRVPLRWLGVRPSQILQRFDLPDEVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMADEHM--KCELEALNTFSGTEGRRDFLCQFVVSSLMSGDHL 476
            T ++++ RIE   A ++   S   + E    E  +R+ S   Y          D   Q +L     G+   + KL  +G R Y  I+ +L  +H +L   + AT R+++Y +      FK Q + D A+LDA ++LG+ R  + IV A KG F G             +  + +              D +W          IT E+++++          ++V+EK+ +F RL  D   +     +LITG+G+PDLATR  +  L +   + VLGLCDCNP G++++LTYK GS RMP ES  Y V ++W+GVRPSQI    DLP   F+  +  D     SL  S F QA+  +++EV+    + +  K ELEAL+    T     FL  F+ + +  G++L
Sbjct:  139 TREDILRRIEALAAEFLEILSTGKVLE---LEALKRDSSAMIY----------DHENQRQL----HGNDTRLIKLNRQGGRKYTGIWLILQTAHALLTENKTATQRDVYYLH----PFFKGQGEADEAILDAGSILGIPRDSMNIVAATKGCFTGDISVLVSLCFAMASHRHDTHFDIFCLFDFFGKRDGKWRHFGSGEEVSITHELLQLKPQEMKSNATCILVIEKDGIFNRLREDKFFEIVPS-ILITGRGFPDLATRVFVSLLRNALEIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAVDIKWVGVRPSQIAD-LDLPISSFKALTRKDLAVADSLFRSSFIQANDHFKDEVQMWLGDALPWKIELEALHVLGFT-----FLTSFLQACIEKGNYL 514          
BLAST of NO06G02260 vs. NCBI_GenBank
Match: ETL86535.1 (hypothetical protein L917_14017 [Phytophthora parasitica])

HSP 1 Score: 172.6 bits (436), Expect = 3.000e-39
Identity = 126/404 (31.19%), Postives = 196/404 (48.51%), Query Frame = 0
Query:   87 TTQEVIDRIEEFIAAWIASFSNPAITEPPTFEVPRRNQSNSTYHKGATGGDDTDTMEQDRLPGLRQGSGMVVKKLKGKGARSYAAIFAVLAFSHRVLLSGQIATSRELWYHYKTSRECFKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFRPLGSLMAWTECNASXXXXXXXXXXXXLIDSRW----------IT-EVMEIECAG-GHRPRYVVVVEKECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLGLCDCNPHGIALLLTYKCGSLRMP-ESQLYRVPLRWLGVRPSQILQRFDLPDEVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMADEHM--KCELEALNTFSGTEGRRDFLCQFVVSSLMSGDHL 476
            T ++++ RIE   A ++   S   + E    E  +R+ S   Y          D   Q +L     G+   + KL  +G R Y  I+ +L  +H +L   + AT R+++Y +      FK Q + D A+LDA ++LG+ R  + IV A KG F G             +  + +              D +W          IT E+++++          ++V+EK+ +F RL  D   +     +LITG+G+PDLATR  +  L     + VLGLCDCNP G++++LTYK GS RMP ES  Y V ++W+GVRPSQI    DLP   F+  +  D     SL  S F QA+  +++EV+    + +  K ELEAL+    T     FL  F+ + +  G++L
Sbjct:   23 TREDILRRIEALAAEFLEILSTGKVLE---LEALKRDSSAMIY----------DHENQRQL----HGNDTRLIKLNRQGGRKYTGIWLILQTAHALLTENKTATQRDVYYLH----PFFKGQGEADEAILDAGSILGIPRDSMNIVAATKGCFTGDISVLVSLCFAMASHRHDTHFDIFCLFDFFGKRDGKWRHFGSGEEVSITHELLQLKPQEMKSNATCILVIEKDGIFNRLREDKFFEIVPS-ILITGRGFPDLATRVFVSLLRSALEIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLQYAVDIKWVGVRPSQIAD-LDLPISSFKALTRKDLAVADSLFRSSFIQANDHFKDEVQMWLGDALPWKIELEALHVLGFT-----FLTSFLQACIEKGNYL 398          
BLAST of NO06G02260 vs. NCBI_GenBank
Match: ETO68442.1 (hypothetical protein F444_14705 [Phytophthora parasitica P1976])

HSP 1 Score: 172.2 bits (435), Expect = 4.000e-39
Identity = 125/404 (30.94%), Postives = 197/404 (48.76%), Query Frame = 0
Query:   87 TTQEVIDRIEEFIAAWIASFSNPAITEPPTFEVPRRNQSNSTYHKGATGGDDTDTMEQDRLPGLRQGSGMVVKKLKGKGARSYAAIFAVLAFSHRVLLSGQIATSRELWYHYKTSRECFKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFRPLGSLMAWTECNASXXXXXXXXXXXXLIDSRW----------IT-EVMEIECAG-GHRPRYVVVVEKECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLGLCDCNPHGIALLLTYKCGSLRMP-ESQLYRVPLRWLGVRPSQILQRFDLPDEVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMADEHM--KCELEALNTFSGTEGRRDFLCQFVVSSLMSGDHL 476
            T ++++ RIE   A ++   S   + E    E  +R+ S   Y          D   Q +L     G+   + KL  +G R Y  I+ +L  +H +L   + AT R+++Y +      FK Q + D A+LDA ++LG+ R  + IV A KG F G             +  + +              D +W          IT E+++++          ++V+EK+ +F RL  D   +     +LITG+G+PDLATR  +  L     + VLGLCDCNP G++++LTYK GS RMP +S  Y V ++W+GVRPSQI+   DLP   F+  +  D     SL  S F QA+  +++EV+    + +  K ELEAL+    T     FL  F+ + +  G++L
Sbjct:  147 TREDILRRIEALAAEFLEILSTGKVLE---LEALKRDSSAMIY----------DHENQRQL----HGNDTRLIKLNRQGGRKYTGIWLILQTAHALLTENKTATQRDVYYLH----PFFKGQGEADEAILDAGSILGIPRDSMNIVAATKGCFTGDISVLVSLCFAMASHRHDTHFDIFCLFDFFGKRDGKWRHFGSGEEVSITHELLQLKPQEMKSNATCILVIEKDGIFNRLREDKFFEIVPS-ILITGRGFPDLATRVFVSLLRSALEIPVLGLCDCNPFGLSIMLTYKLGSARMPLDSLQYAVDIKWVGVRPSQIVD-LDLPISSFKALTRKDLAVADSLFRSSFIQANDHFKDEVQMWLGDALPWKIELEALHVLGFT-----FLTSFLQACIEKGNYL 522          
The following BLAST results are available for this feature:
BLAST of NO06G02260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26210.13.700e-15460.42meiotic recombination protein spo11 isoform 2 [Nan... [more]
XP_008607094.11.800e-4434.15hypothetical protein SDRG_03242 [Saprolegnia dicli... [more]
OQR86141.11.300e-4234.78hypothetical protein ACHHYP_10951 [Achlya hypogyna... [more]
XP_009824737.13.800e-4235.87hypothetical protein H257_02688 [Aphanomyces astac... [more]
XP_008863706.11.400e-3938.60hypothetical protein H310_02090 [Aphanomyces invad... [more]
ETK79829.12.300e-3931.19hypothetical protein L915_14321 [Phytophthora para... [more]
XP_008910404.12.300e-3931.19hypothetical protein PPTG_23618 [Phytophthora para... [more]
ETP09573.12.300e-3931.19hypothetical protein F441_14559 [Phytophthora para... [more]
ETL86535.13.000e-3931.19hypothetical protein L917_14017 [Phytophthora para... [more]
ETO68442.14.000e-3930.94hypothetical protein F444_14705 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000233NSK000233Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02260.1NO06G02260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO06G02260.2NO06G02260.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597300gene_6542Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100025g52gene4284Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02260.1NO06G02260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO06G02260.2NO06G02260.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02260 ID=NO06G02260|Name=NO06G02260|organism=Nannochloropsis oceanica|type=gene|length=2367bp
ACCCAAAACAAACCCATTCTTTTCGTCATATAAGTATTAATTTCCTTACA
TCGACATTTTACATTCCTGGTATGCCCGGGGATAATAAGGTCACCTCCAC
TCACACTCCTCCATTTCCTCCCTCACATCAATCCAAAGGCAAAGTTGATG
CAGCGACACCCAATTTCGGGCCAGCCGCTCTTCTCCTCTTTTCTTCCTCC
TCATCTGCCTGCCCGCGTTCTCACATCGTCTAACGGCAAGCACCGCGCCT
ACATCCAGCCAAATTCAAATGTTCCTTCACTTCCCTCCTCTTCTTCCTCT
TCTTCTTCCTCTTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCTTCCTCCTCCTTCTCGTCATCGATCCCCACGGCTGCAGCGGTCGCGG
ACATAACTACTCAAGAAGTTATCGATCGCATCGAAGAGTTCATTGCCGCC
TGGATTGCGTCCTTCAGCAACCCCGCCATCACGGAACCCCCTACATTTGA
GGTCCCTCGACGCAACCAATCCAACTCCACCTACCACAAGGGCGCCACCG
GTGGCGATGACACCGACACGATGGAGCAAGACCGACTGCCGGGCCTGCGA
CAAGGAAGTGGAATGGTCGTGAAAAAGCTGAAAGGGAAGGGCGCGCGTTC
TTATGCTGCCATTTTTGCCGTGTTGGCTTTCTCACACCGCGTGCTGCTTT
CGGGGCAGATTGCGACCAGTCGAGAGTTGTGGTATCACTACAAGACGTCG
CGGGAGTGCTTCAAGAGCCAGGCGGACTGTGATCGGGCCGTGCTTGATGC
AGCGGCGCTGTTGGGCGTTGCGAGGCATCAACTAGGGATAGTGGGGGCGG
CGAAGGGGTTGTTTGCAGGGTATTTCCGGTTTCGACCGTTGGGAAGTTTG
ATGGCCTGGACGGAGTGTAATGCGAGTGGAGGAGAGGGAGGAGGTGGAGG
AGGGGGTGGAACGTTGATTGATAGTCGCTGGATAACTGAGGTGATGGAGA
TTGAGTGCGCGGGGGGGCATCGACCAAGATATGTGGTGGTGGTGGAGAAA
GAGTGTGTTTTCCAACGGCTGCTGGGGGATGGATTATGCGACGCGGCCGG
AGGTGTGGTACTTATTACAGGGAAAGGCTACCCGGATTTGGCCACGCGCG
CTTGTTTGAAGGCTTTGGTGGATTGTTGGGGAGTTACGGTGCTCGGCCTA
TGTGACTGTAATCCgtgagtatttcttacggttctggttggagggatgcg
tgtatgcgcgtgtgtgcgtctatctgtgtcccttttacagtgctagtcag
gtcagtgtcagagtcttcgccctccctcccccgctttttccctccccctc
ctctcacattcagGCACGGCATCGCTCTCCTCCTCACCTACAAATGCGGC
TCCTTGCGCATGCCCGAGTCCCAGCTTTACCGCGTGCCACTGCGCTGGCT
CGGTGTGCGGCCTTCGCAGATTTTGCAGCGTTTTGACCTACCCGACGAGG
TTTTTCAGGACTTTTCGGAGGGGGACGCGAGGAAGTGTCGGTCGTTACTG
GCGTCTCCTTTTTGTCAGGCGCACCCCAGGTGGAGGGAGGAGGTGGAGGC
AATGGTATGCTTTTCTCATGTGTGTATATGTGCTGTTTGGCTTTCACGAT
TCGCGGCGGTACTGATGTTCGTACTTTGTCCACCACTCGCTTTCTCCCTC
TCGCCCTCCCCCGGTCCCGCGCACACACAGGCCGACGAACACATGAAATG
CGAGCTCGAGGCGCTCAACACCTTCTCGGGCACTGAGGGTCGACGTGATT
TTCTATGCCAGTTTGTCGTGTCCTCCTTGATGTCAGGAGACCACCTGAGC
TAAGCTGTGCGCGAAGGGGGGGGAGGGGGAGGGGCAGGAGATGGGGAGAG
TGAAAGGGAAGAGATCTGCGGAAGTGAGGCTGGTCAAGCGCACTGGACAG
TACAAGCGTATAGGACAGGAGAAGTGAAGCATGGAGAGGGAGTGGGAGAA
GTTGTTACTATAGCTGCTCGAGAGAAAAAGAAAAGTGGGGCGGCAAAAAT
GTAGAGGAGCATGCCTTTTGTTACAGCCCCTGTCGCATTTCATCCAGTTT
TTGCCCTCTCCATATGTCCCTATCCACCACATATGTGTTGGCCCCCCTAC
ATGTCTGCATTCTCATTATTCCATCGGGCGGGAACCCGGCCCCACAAGGG
TATAGCTATAGCATGGGCATGGGGGCTCGCTGATGACGCCGCCGCTCGCA
ACTGCCTCATCGCAGATTCCATTCCAGGGAACGTTGTCCATTTCGCATTT
GCACTGCATTGTCGGCTCTGGCTCATTCAAGTCAAAAAGGTGGACCTTAG
GCACTCCTTGCTCTTTG
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protein sequence of NO06G02260.1

>NO06G02260.1-protein ID=NO06G02260.1-protein|Name=NO06G02260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=477bp
MQRHPISGQPLFSSFLPPHLPARVLTSSNGKHRAYIQPNSNVPSLPSSSS
SSSSSSSSSSSSSSSSSSSSSSFSSSIPTAAAVADITTQEVIDRIEEFIA
AWIASFSNPAITEPPTFEVPRRNQSNSTYHKGATGGDDTDTMEQDRLPGL
RQGSGMVVKKLKGKGARSYAAIFAVLAFSHRVLLSGQIATSRELWYHYKT
SRECFKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFRPLGS
LMAWTECNASGGEGGGGGGGGTLIDSRWITEVMEIECAGGHRPRYVVVVE
KECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLG
LCDCNPHGIALLLTYKCGSLRMPESQLYRVPLRWLGVRPSQILQRFDLPD
EVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMADEHMKCELEALNT
FSGTEGRRDFLCQFVVSSLMSGDHLS*
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protein sequence of NO06G02260.2

>NO06G02260.2-protein ID=NO06G02260.2-protein|Name=NO06G02260.2|organism=Nannochloropsis oceanica|type=polypeptide|length=519bp
MQRHPISGQPLFSSFLPPHLPARVLTSSNGKHRAYIQPNSNVPSLPSSSS
SSSSSSSSSSSSSSSSSSSSSSFSSSIPTAAAVADITTQEVIDRIEEFIA
AWIASFSNPAITEPPTFEVPRRNQSNSTYHKGATGGDDTDTMEQDRLPGL
RQGSGMVVKKLKGKGARSYAAIFAVLAFSHRVLLSGQIATSRELWYHYKT
SRECFKSQADCDRAVLDAAALLGVARHQLGIVGAAKGLFAGYFRFRPLGS
LMAWTECNASGGEGGGGGGGGTLIDSRWITEVMEIECAGGHRPRYVVVVE
KECVFQRLLGDGLCDAAGGVVLITGKGYPDLATRACLKALVDCWGVTVLG
LCDCNPHGIALLLTYKCGSLRMPESQLYRVPLRWLGVRPSQILQRFDLPD
EVFQDFSEGDARKCRSLLASPFCQAHPRWREEVEAMVCFSHVCICAVWLS
RFAAVLMFVLCPPLAFSLSPSPGPAHTQADEHMKCELEALNTFSGTEGRR
DFLCQFVVSSLMSGDHLS*
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Synonyms
Publications