NO06G02250, NO06G02250 (gene) Nannochloropsis oceanica

Overview
NameNO06G02250
Unique NameNO06G02250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1729
Alignment locationchr6:654905..656633 -

Link to JBrowse

Properties
Property NameValue
DescriptionHeat shock protein Hsp33
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:654905..656633 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR016154Heat_shock_Hsp33_C
IPR016153Heat_shock_Hsp33_N
IPR000397Heat_shock_Hsp33
Homology
BLAST of NO06G02250 vs. NCBI_GenBank
Match: EWM26243.1 (Heat shock protein Hsp33 [Nannochloropsis gaditana])

HSP 1 Score: 616.7 bits (1589), Expect = 5.600e-173
Identity = 311/372 (83.60%), Postives = 336/372 (90.32%), Query Frame = 0
Query:   66 GYNNQSYQYRRNVQRPTPRGPAFRRFMTSPPTHANAG---SDDFVPIEPATLNWEKVGPDQDVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIELREQALAAAAAGEPWPA 435
            G +  S  Y RN  RPT RGP+FR F TS P HANAG   +DDFVPI PATLNWEK+GPDQDVFISALSQNGHVNVKVISAKNMVQAI+EKRELS V+TELLGRVMLS MLVANGIKDEETLQLTF+GDG AKGVMAISDGACNVRAWIGNSDLDDL+DPET +ADIK+AVGKGTLQVVKNHPSWRIPYNGVV+IASGEVAPDVAFYLASSEQRNTALGVGL +DP +G V SAGGFY+EMMPGVEEESVLKVEVNLAV+KERFGSVD G LFA K+P+TPYKLVKMLLDGLGV MA E+ P YRCTCSAEKVFRA+SLLGEEEVE ILA+EG+I AKCEFCAE+YEL+REQL+ LRE+ALAAA AGEPWPA
Sbjct:   64 GMSFNSPPYTRNNNRPTSRGPSFRLFKTSAPLHANAGGTNNDDFVPISPATLNWEKIGPDQDVFISALSQNGHVNVKVISAKNMVQAIREKRELSAVSTELLGRVMLSAMLVANGIKDEETLQLTFSGDGAAKGVMAISDGACNVRAWIGNSDLDDLKDPETGRADIKAAVGKGTLQVVKNHPSWRIPYNGVVQIASGEVAPDVAFYLASSEQRNTALGVGLSLDPKTGEVESAGGFYIEMMPGVEEESVLKVEVNLAVLKERFGSVDPGVLFAGKQPVTPYKLVKMLLDGLGVGMAEETQPAYRCTCSAEKVFRAVSLLGEEEVESILAQEGMIAAKCEFCAEKYELSREQLVALREEALAAAEAGEPWPA 435          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: OEU10560.1 (Hsp33 domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 222.6 bits (566), Expect = 2.300e-54
Identity = 109/292 (37.33%), Postives = 184/292 (63.01%), Query Frame = 0
Query:  124 DVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQL 416
            D   SALS++G V +   +A+N+V  +     ++ V  + +GR ++  ++++NG+++E+T Q+TFN DG  +GV+AISDG  NVR ++G+  L D+  PE        A+G+G +QVVKNHP W  PYNG+  I  G++  D+  YLA SEQR+ AL     ++ +     +AGG+ +E +P    E++ +VE NLA + E+ GS D      L   +TP ++ + +LDGLG+    +  P ++C+CS++++ RAL L+  +EV++IL +EG I+A+C+FC++ Y L  +++
Sbjct:   76 DQVFSALSEDGSVKITACTARNIVNDLMIMHTMTAVPADAIGRTVVCALMMSNGMQEEQTCQITFNADGPLRGVVAISDGVGNVRGYVGSPMLGDIELPE--------ALGQGMVQVVKNHPDWSNPYNGITSIRHGDIDRDIGAYLAESEQRSCALAAATSINGIL--CTAAGGYLIEQLPNATPETLARVEKNLATLVEKDGS-DKLPANLLLNGVTPLEIAETILDGLGMVPLQQISPKFQCSCSSDRLIRALRLIPRKEVDEILEEEGKIEARCDFCSKTYALGPDEI 356          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: GAX18128.1 (molecular chaperone Hsp33 [Fistulifera solaris])

HSP 1 Score: 218.8 bits (556), Expect = 3.400e-53
Identity = 120/303 (39.60%), Postives = 184/303 (60.73%), Query Frame = 0
Query:  122 DQDVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHL--FALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIELREQA 423
            ++D   SA+S +G + V V + +N++     +  ++ V T+ LGR M   +L+ANG+++E+T+Q+T  GDG  +GV+AI+ G+  VR ++G+  L ++  PE        AVGKG++QVVKNHP W  PYNG+  I  G++  DV  YLA SEQR+ AL   + V  +     SAGG+ +E +PGVE + V +VE NLA + E  G+   G+L    L +  TP  +   +LDGL +    +  P   C C+ +++ R+L LL  EEVEDILAKE  I+A+C+FC + Y L +E++ E  + A
Sbjct:   70 NRDQIFSAISGDGGIKVTVATIRNVINDASMQHTMTAVPTDALGRAMTCGLLMANGMQEEQTVQITMKGDGPLRGVVAIATGSGTVRGYVGSPMLGEMSLPE--------AVGKGSVQVVKNHPDWPRPYNGITAIRHGDIDRDVGIYLAESEQRSCALAAAVSVKGIL--CTSAGGYLIEQLPGVEPDVVKQVEKNLAQLVEMDGT---GNLPTGLLLQGQTPVDIAATILDGLDMKPLQQMEPVLVCQCTEDRLMRSLRLLPREEVEDILAKEQQIEARCQFCGKVYRLGKEEIEERLQNA 359          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: GAX10042.1 (molecular chaperone Hsp33 [Fistulifera solaris])

HSP 1 Score: 218.4 bits (555), Expect = 4.400e-53
Identity = 123/312 (39.42%), Postives = 187/312 (59.94%), Query Frame = 0
Query:  122 DQDVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHL--FALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIELREQALAAAAAGEP 432
            ++D   SA+S +G + V V + +N++     +  ++ V T+ LGR M   +L+ANG+++E+T+Q+T  GDG  +GV+AI+ G+  VR ++G+  L ++  PE        AVGKG++QVVKNHP W  PYNG+  I  G++  DV  YLA SEQR+ AL   + V  +     SAGG+ +E +PGVE + V +VE NLA + E  G+   G+L    L +  TP  +   +LDGL +    +  P   C C+ +++ R+L LL  EEVEDILAKE  I+A+C+FC + Y L +E++ E  +      A GEP
Sbjct:   69 NRDQIFSAISGDGGIKVTVATIRNVINDASMQHTMTFVPTDALGRAMTCGLLMANGMQEEQTVQITMKGDGPLRGVVAIATGSGTVRGYVGSPMLGEMSLPE--------AVGKGSVQVVKNHPDWPRPYNGITAIRHGDIDRDVGIYLAESEQRSCALAAAVSVKGIL--CTSAGGYLIEQLPGVEPDVVKQVEKNLAQLVEMDGT---GNLPTGLLLQGQTPVDIAATILDGLDMKPLQQMEPVLVCQCTEDRLMRSLRLLPREEVEDILAKEQQIEARCQFCGKVYRLGKEEIEERLQN-----ATGEP 362          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: XP_002186478.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65948.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 213.4 bits (542), Expect = 1.400e-51
Identity = 114/310 (36.77%), Postives = 186/310 (60.00%), Query Frame = 0
Query:  122 DQDVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIELREQALAAAAAGEP 432
            D  VF SA+S +G + V   + +N++  I  +  ++   T+ +GR +   +L+ANGI+DE+ +Q+T NGDG  +G++AI+ G   VR ++G+  L ++         +  AVGKG++Q+VKNHP W  PYNG+  I  G++  D+  YLA SEQR+ AL     ++ +     +AGG+ +E +PGVE E++ +VE NLA + ++ G  D      L   +TP  +  ++LDGL +    +  P   C C+ +++FR+L LL +EEV+DIL KE  I+A+C+FC + Y +      E+R++   AAA G+P
Sbjct:   65 DDQVF-SAMSGDGGIKVTAATVRNLLNDISLQHTMTATPTDAMGRTVTCGLLLANGIQDEQIVQITMNGDGPIRGIVAIASGTGQVRGYVGSPGLGEM--------SLTDAVGKGSVQIVKNHPDWPRPYNGITAIRHGDIDRDIGIYLAESEQRSCALAAATAMNGIL--CTAAGGYLIEQLPGVEPETIARVEQNLAKLVQKDGG-DELPANLLLSGVTPLDMAAIILDGLDMQPLQQIKPGLVCHCTEDRLFRSLRLLSKEEVDDILEKEEQIEARCQFCGKVYRMGAP---EIRDR--LAAAKGDP 357          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: CBN77618.1 (heat shock protein 33 [Ectocarpus siliculosus])

HSP 1 Score: 212.6 bits (540), Expect = 2.400e-51
Identity = 120/304 (39.47%), Postives = 183/304 (60.20%), Query Frame = 0
Query:  115 NWEKVGPDQDVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGL-GVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIE 418
            N   VG D D  +SA++ NG V  + ++A+N++Q    +++L  +A + LGRVM+ TML+A G+KD ET QL+F+G G   GV+AISDG   VR ++ N  + +L   +    D+   +G+G L+VV+NHP ++ PY G+  + +GEVA D A YLA SEQ++ A+  G  V      V  AGG+ +E +P   EE+   V  N+A +  R  S D   L  +   +TP  +V+ LL+GL GV   +   P + C CS E+V+ AL LL + EVE+++ KE  I+ KCEFC + Y L+ E +++
Sbjct:  115 NTAPVGNDADHMVSAVAGNGQVVARAVTARNLLQDALIRQDLYPLAADALGRVMVCTMLMAGGLKDRETFQLSFSGSGPLGGVVAISDGEGGVRGYVTNGKV-ELPLKDNGNQDVAQGIGEGLLKVVRNHPDYQRPYTGITALKTGEVAYDAASYLAESEQKSCAIAAGCFV--TDALVRQAGGYMLETLPEASEETEKTVINNIAKLLAR--SSDPSDL--MGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKTEVEELVKKEETIEVKCEFCGKLYRLSAEDVVK 411          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: XP_005705251.1 (molecular chaperone Hsp33 [Galdieria sulphuraria] >EME28731.1 molecular chaperone Hsp33 [Galdieria sulphuraria])

HSP 1 Score: 193.0 bits (489), Expect = 2.000e-45
Identity = 100/295 (33.90%), Postives = 172/295 (58.31%), Query Frame = 0
Query:  124 DVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIEL 419
            D     +S NG V++K + A  +V      +E   VAT  LGR ++  +L++ G K +ET+ + F G G  + V+A++DG   VR ++G+ ++ DL      K D+  A+G+G ++V +NH +W+ PY G+  I SGEVA D+A YL  SEQ  +A+  G+ V P  G+V++AGG+ V+++PG  EE+       L +++E   S++      ++  +    +V  L +GL +    +S P YRC CS ++V R ++LL ++E++ ++A  G +  KCEFC   Y+LT  ++ ++
Sbjct:  122 DELARTISCNGKVSLKSLVATGLVDGAARIQETKPVATAALGRTLICALLLSAGKKSDETVNIEFRGSGPLRTVVAVADGLGQVRGYVGDRNV-DLPPNRKGKLDVSRAIGEGIVRVTRNHYTWKQPYQGLTRIVSGEVAEDIANYLYQSEQIFSAVAAGVFVKP-DGSVSAAGGYLVQLLPGASEET-------LKLLEETLYSLEYSPTEMIRLGMNSTDIVNKLAEGLNIQQVHKSRPLYRCHCSIDRVERTVALLPKDEIDQLVASIGTLQVKCEFCNRTYQLTPPEIEQI 407          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: XP_005538524.1 (similar to heat shock protein Hsp33 [Cyanidioschyzon merolae strain 10D] >BAM82488.1 similar to heat shock protein Hsp33 [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 190.7 bits (483), Expect = 9.900e-45
Identity = 106/299 (35.45%), Postives = 173/299 (57.86%), Query Frame = 0
Query:  124 DVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIELREQA 423
            D  ++ LS++ +V VK I A  +V+   E  E + VA   LGR +L+ +L+A+G KD ET+Q+ F GDG  + V+AI+DG  +VR ++G+  +  L      K D+  AVG+G L VV+NH +W  PY G+ EI +GE+  DV  YL  SEQ  +AL +G+ V    G+V +AGG+ V+++P    E++ +VE N+  + +R           +++ +    +V+ L+  +  +      P Y C+C A +V R ++LL  +E+E IL ++  ++AKCEFC   YEL+ ++   L   A
Sbjct:   70 DELVTCLSKDRNVVVKAIRASGLVRTASELHEATPVAAAALGRSLLAALLLASGKKDLETVQMEFRGDGPLRAVVAIADGRGHVRGYVGDPQV-QLPPTAAGKLDVGRAVGRGFLAVVRNHSTWSEPYRGITEIQTGEIGDDVLHYLVRSEQIPSALALGVFVQ--GGHVQAAGGYLVQLLPESTPETLDRVEENVLQLNKRGTPTQ-----LIRDGMDAVDIVQQLMVDIDETSLRRVQPQYSCSCDASRVRRMVALLPRDEIESILREQNRLEAKCEFCGSYYELSSDETRALLRDA 360          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: XP_002288416.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93852.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 189.5 bits (480), Expect = 2.200e-44
Identity = 117/353 (33.14%), Postives = 182/353 (51.56%), Query Frame = 0
Query:   67 YNNQSYQYRRNVQRPTPRGPAFRRFMTSPPTHANAGSDDFVPIEPATLN----WEKVGPDQDVFISALSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQL 416
            Y  + Y+    V+R T R        TS    ++  S   VP  P        ++      D   SA+S +G + V V + +N++  +  +  ++ V  + +GR  L  ++ +NG+++E+  QL+  G+G  +G + I  G    R ++GN  L D          ++ AVG GT+QVVKNHP W  PYNG+  I  G++  DV  YLA SEQR+ AL      + +     +AGG+ VE +P    E++  +E NLA + E  G  DA     L +  TP  +  +LLDGLG+      LP   C CS EK+ R+L LL  +EV+ IL +EG I+A+C+FC + Y +  E++
Sbjct:   57 YLQKQYKSSAAVERSTFRRVRGTSTSTSTWMTSDDASSQPVPSSPTATTDLTAYQNPNNLDDQVFSAMSSDGGLKVTVATIRNLLNDMMIQHTMNPVPGDAIGRSTLCALMASNGMQEEQMFQLSMKGEGPLRGCVVIVTGKGEARGFVGNPSLGD-------DFTLREAVGTGTVQVVKNHPDWPRPYNGITAIRHGDIDRDVGIYLAESEQRSCALAAATSFNGIL--CTAAGGYLVERLPDCSPETMSHMERNLARLVEMDGG-DALPTNLLLDGKTPLDIASVLLDGLGMEPLGSVLPKAFCECSDEKLMRSLRLLPRKEVDVILQEEGKIEARCQFCGKVYRMGPEEV 399          
BLAST of NO06G02250 vs. NCBI_GenBank
Match: OSX78844.1 (hypothetical protein BU14_0098s0070 [Porphyra umbilicalis])

HSP 1 Score: 185.3 bits (469), Expect = 4.100e-43
Identity = 109/289 (37.72%), Postives = 164/289 (56.75%), Query Frame = 0
Query:  130 LSQNGHVNVKVISAKNMVQAIKEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAISDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIPYNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFYVEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKMLLDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAKCEFCAERYELTREQLIEL 419
            +S NG V V+ +SA  +V A       S VA+   GR +LS +L+A G K  ET QL F  DG  +G+M +++G   VR ++G   +  L        ++ +AVG+G L VV+N P ++ P+ G+  I +GEV  ++A YLASSEQ  +ALGVG+ V    G V SA GF V+++PG  E SV  VE N+  + ER G V               ++V +L+ GL      E+ P + C CS E+V R + LLG ++ E+++A+ G +DA CEFC   Y LT ++++ +
Sbjct:    1 MSANGEVTVRAVSATGLVAASCHLHRTSPVASAAFGRSLLSGLLLAAGKKGAETTQLEFRCDGPLRGIMIVANGVGEVRGYVGEPRV-VLPPKADGSLNVGAAVGRGILAVVRNAPHYKKPFTGLTSIVTGEVGDEIAEYLASSEQTPSALGVGVGVG-ADGRVTSASGFLVQILPGASEASVATVERNVKALGER-GVVGR----------AADEMVGVLMGGLDPLTLVETAPRFTCHCSVERVKRTVRLLGRKDCEELVAERGGVDATCEFCGRSYGLTGDEVLAM 276          
The following BLAST results are available for this feature:
BLAST of NO06G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26243.15.600e-17383.60Heat shock protein Hsp33 [Nannochloropsis gaditana... [more]
OEU10560.12.300e-5437.33Hsp33 domain-containing protein [Fragilariopsis cy... [more]
GAX18128.13.400e-5339.60molecular chaperone Hsp33 [Fistulifera solaris][more]
GAX10042.14.400e-5339.42molecular chaperone Hsp33 [Fistulifera solaris][more]
XP_002186478.11.400e-5136.77predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBN77618.12.400e-5139.47heat shock protein 33 [Ectocarpus siliculosus][more]
XP_005705251.12.000e-4533.90molecular chaperone Hsp33 [Galdieria sulphuraria] ... [more]
XP_005538524.19.900e-4535.45similar to heat shock protein Hsp33 [Cyanidioschyz... [more]
XP_002288416.12.200e-4433.14predicted protein [Thalassiosira pseudonana CCMP13... [more]
OSX78844.14.100e-4337.72hypothetical protein BU14_0098s0070 [Porphyra umbi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000235NSK000235Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02250.1NO06G02250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597290gene_6541Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100025g51gene4285Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02250.1NO06G02250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02250 ID=NO06G02250|Name=NO06G02250|organism=Nannochloropsis oceanica|type=gene|length=1729bp
AACACAAGCACAGAGATGAAGGACACGAGATCCCTTACCTTCTTTTTCGC
TCCCTTCCGTTGGTATTCCCTATCTTTGTGTTGTTGTTGCCTGTTGCTCT
TCCCGACCATGCTTTCCGCCTTGATCACCACGACCTCCCGCCTCCGGCCC
AACTTGAGCGGCCGCCGCGCGTTGACTACGACCACCAGCATGCGCGCTGG
AATTGGTGGAGGCTATAACAATCAGTCGTACCAGTACCGTCGCAATGTGC
AGCGGCCTACGCCTCGGGGCCCGGCCTTCCGGCGCTTCATGACCAGTCCC
CCCACTCATGCCAATGCCGGCAGCGATGACTTCGTGCCCATCGAGCCTGC
GACTCTGAATTGGGAAAAGGTTGGCCCGGACCAAGATGTATTTATAAGTG
CCTTGTCGCAAAATGGCCATGTAAATGTGAAGGTTATCTCGGCTAAGAAC
ATGGTGCAGGCCATAAAGGAAAAGAGGGAGTTGTCAGGAGTCGCCACGGA
GCTCCTTGGGCGAGTCATGCTTAGCACGATGCTGGTGGCCAACGGCATCA
AGGACGAAGAGACCTTGCAGCTCACTTTCAACGGTGATGGGCAAGCCAAG
GGAGTCATGGCCATTTCGGACGGAGCATGCAACGTCCGTGCGTGGATTGG
TAATAGCGACTTGGATGATTTACGGGACCCCGAAACACTTAAAGCGGACA
TTAAATCCGCAGTCGGGAAAGGCACCTTACAAGTTGTCAAGAACCATCCA
TCCTGGCGTATTCCTTATAATGGGGTGGTGGAGATTGCCTCAGGGGAGGT
GGCCCCGGATGTGGCGTTCTACCTGGCGTCTTCCGAGCAGCGCAATACGG
CGTTAGGTGTCGGGTTGCAGGTGGATCCATTGAGCGGGAACGTCGCTTCC
GCCGGTGGGTTTTATGTGGAAATGATGCCTGGGGTGGAGGAGGAGAGTGT
GCTGAAGGTGGAAGTGAATCTAGCGGTGATCAAGGAGCGGTTTGGGAGCG
TGGATGCGGGGCATTTGTTTGCGCTAAAGGAGCCGATAACGCCTTACAAG
CTGGTGAAGATGCTCTTAGATGgtaaatggggaaaagggggagggagaga
agggagggaagaaggagagagagacgtagggcgtgcgcggaaggtaggtt
gtcaacgttgagggaaccggtggcgctgtgtgtgacggtcaggacggtgt
tggactaaacggggggagaaaggagggagggagggagggagggagggaca
gaagggagggaggaatgggtggtttggacgtgtagatataagtgtaacgt
gtgactggtttgtagtaggttgacaggcggctccacattttgtgtcccaa
cacttacgttgtctctgtagattcacttacccatcgtcctctcccctccg
accctccatccctccctcccccagGCCTCGGCGTCAGCATGGCTTCCGAA
AGCCTGCCAACCTACCGCTGCACCTGCTCGGCAGAAAAGGTCTTTCGTGC
CTTGAGCCTACTGGGGGAGGAGGAGGTTGAGGACATCCTGGCAAAAGAGG
GGGTTATTGACGCGAAATGTGAGTTCTGTGCCGAGAGGTATGAGTTGACT
AGGGAGCAGTTGATTGAGCTTAGAGAGCAGGCGCTGGCGGCGGCGGCGGC
GGGGGAGCCCTGGCCGGCGACCCGGTGAGAGAGAGAGAGGAGAAGCACAG
GAGCAAAATGGCTAAGAATTATAATATTA
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protein sequence of NO06G02250.1

>NO06G02250.1-protein ID=NO06G02250.1-protein|Name=NO06G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=437bp
MKDTRSLTFFFAPFRWYSLSLCCCCLLLFPTMLSALITTTSRLRPNLSGR
RALTTTTSMRAGIGGGYNNQSYQYRRNVQRPTPRGPAFRRFMTSPPTHAN
AGSDDFVPIEPATLNWEKVGPDQDVFISALSQNGHVNVKVISAKNMVQAI
KEKRELSGVATELLGRVMLSTMLVANGIKDEETLQLTFNGDGQAKGVMAI
SDGACNVRAWIGNSDLDDLRDPETLKADIKSAVGKGTLQVVKNHPSWRIP
YNGVVEIASGEVAPDVAFYLASSEQRNTALGVGLQVDPLSGNVASAGGFY
VEMMPGVEEESVLKVEVNLAVIKERFGSVDAGHLFALKEPITPYKLVKML
LDGLGVSMASESLPTYRCTCSAEKVFRALSLLGEEEVEDILAKEGVIDAK
CEFCAERYELTREQLIELREQALAAAAAGEPWPATR*
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Synonyms
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