NO06G02240, NO06G02240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02240 vs. NCBI_GenBank
Match: EWM26251.1 (co-chaperone hsc20 [Nannochloropsis gaditana]) HSP 1 Score: 376.3 bits (965), Expect = 1.100e-100 Identity = 186/267 (69.66%), Postives = 217/267 (81.27%), Query Frame = 0 Query: 85 SRQQPRPPTFLRSAGLASTAHNHDTHKPPPFCCGNPNCEHQGADLKEDGYNYENEEXXXXXXXXXXXXXDELPPCWACGKPTGCCNFFCACGKIQPLIGHCSYFETFGLPKSYDLDPKELERAFFELQKTMHPDRYMQKSSTEQDFSRSNSTYVNVAYRTLKDPTLRAKYLLQLEGVRALDERSKTADPALLMEVMELREEVDESRKPEALIRLIRRNRKAIDAVKKELIQLYTEKEWTRMVALTNRLQYLSKVGFEAREKLDLLEG 352 +R++PRPP+ + S ASTAHNHDT+ PPFCCGNPNCEHQ + + +++ + ++LPPCWACGKPTGCCNFFCACGKIQPLIGHCSYFETFGLPK YDLD K+LE+ FF LQKTMHPDRY QKSSTEQDFSRSNSTY+NVAYRTLKDP RAKYLLQLEGV+ALDERSKTADPALLMEVMELREEV+ES E L L+ RN++A++ VK+EL +K+W+RMV+LTNRLQYLSKV FEARE+L+LLEG Sbjct: 60 TRRRPRPPSTVGSDRFASTAHNHDTYHQPPFCCGNPNCEHQQSHEDDSSGKHDHPQ----------SHTEDLPPCWACGKPTGCCNFFCACGKIQPLIGHCSYFETFGLPKVYDLDVKQLEQTFFNLQKTMHPDRYGQKSSTEQDFSRSNSTYLNVAYRTLKDPISRAKYLLQLEGVKALDERSKTADPALLMEVMELREEVEESGSAENLRALMARNQRAMEGVKEELTARCRQKDWSRMVSLTNRLQYLSKVDFEARERLELLEG 316
BLAST of NO06G02240 vs. NCBI_GenBank
Match: XP_008617831.1 (hypothetical protein SDRG_13516 [Saprolegnia diclina VS20] >EQC28836.1 hypothetical protein SDRG_13516 [Saprolegnia diclina VS20]) HSP 1 Score: 155.6 bits (392), Expect = 3.100e-34 Identity = 85/197 (43.15%), Postives = 118/197 (59.90%), Query Frame = 0 Query: 159 CWACGKPTGCCNFFC-ACGKIQPL--IGHCSYFETFGLPKSYDLDPKELERAFFELQKTMHPDRYMQKSSTEQDFSRSNSTYVNVAYRTLKDPTLRAKYLLQLEGVRALDERSKTADPALLMEVMELREEVDESRKPEALIRLIRRNRKAIDAVKKELIQLYT-EKEWTRMVALTNRLQYLSKVGFEAREKLDLLEG 352 CW CGKP CC FFC C IQPL G C+YF+ FG+P+++ +DPK +E+ ++ LQK MHPD Y KS TE++ S +NS +N AY LK PT RA YLL L G+ AL + + DPA+LM +ME RE+VD+ + L L + N I+A ++ + + LT +LQYL K+ +K + LEG Sbjct: 53 CWNCGKPNDCCVFFCGTCNHIQPLNPSGACNYFKIFGIPENFSIDPKAVEQLYWSLQKKMHPDLYGHKSETEKELSVTNSAVINTAYNMLKAPTTRANYLLHLHGIDALGDNTTLMDPAILMHIMEAREQVDDCTSVDELEPLKKANATDIEACVVQITSAFDGSHDLESSKRLTVQLQYLMKLAEAIVDKEEELEG 249
BLAST of NO06G02240 vs. NCBI_GenBank
Match: OQR90699.1 (hypothetical protein THRCLA_22517 [Thraustotheca clavata]) HSP 1 Score: 155.2 bits (391), Expect = 4.000e-34 Identity = 86/197 (43.65%), Postives = 117/197 (59.39%), Query Frame = 0 Query: 159 CWACGKPTGCCNFFC-ACGKIQPL--IGHCSYFETFGLPKSYDLDPKELERAFFELQKTMHPDRYMQKSSTEQDFSRSNSTYVNVAYRTLKDPTLRAKYLLQLEGVRALDERSKTADPALLMEVMELREEVDESRKPEALIRLIRRNRKAIDAVKKELIQLYT-EKEWTRMVALTNRLQYLSKVGFEAREKLDLLEG 352 CW CGK CC FFC +C +IQPL G C+YF+ FG+P+++ +DPK +E+ ++ LQK MHPD Y KS TE++ S NS +N AY LK PT RA YLL L G+ AL + + DPA+LM +ME RE+VD+ E L L + N I+ E+ + + LT +LQYL K+ EK + LEG Sbjct: 50 CWNCGKANDCCAFFCNSCNRIQPLHPNGACNYFKIFGIPENFSIDPKAVEQLYWSLQKKMHPDLYGHKSETEKELSVVNSAVINTAYNMLKAPTTRANYLLHLHGIDALSDNTTLLDPAILMHIMESREQVDDCSSLEELEPLKKENAADIEKCVVEITSAFDGSHDLETSKRLTVQLQYLMKLAEAIVEKEEALEG 246
BLAST of NO06G02240 vs. NCBI_GenBank
Match: XP_009836135.1 (Fe-S protein assembly co-chaperone HscB [Aphanomyces astaci] >ETV74477.1 Fe-S protein assembly co-chaperone HscB [Aphanomyces astaci]) HSP 1 Score: 154.8 bits (390), Expect = 5.200e-34 Identity = 86/196 (43.88%), Postives = 120/196 (61.22%), Query Frame = 0 Query: 159 CWACGKPTGCCNFFCA-CGKIQPL--IGHCSYFETFGLPKSYDLDPKELERAFFELQKTMHPDRYMQKSSTEQDFSRSNSTYVNVAYRTLKDPTLRAKYLLQLEGVRALDERSKTADPALLMEVMELREEVDESRKPEALIRLIRRNRKAIDAVKKELIQLY-TEKEWTRMVALTNRLQYLSKVGFEAREKLDLLE 351 CW CG+PT CC+FFCA C IQPL G C+YF+ FG+P+S+ +D K++E+ ++ LQK MHPD Y KS E++ S NS VN AY LK PT RA YLL L G+ AL + + DPA LM +ME REE++E + L R N I+A ++L + + + +++ LT LQYL K+ +K D L+ Sbjct: 42 CWKCGQPTDCCSFFCASCSHIQPLRAEGVCNYFKIFGIPESFAIDAKKVEQLYWSLQKKMHPDLYGSKSDVEKELSVVNSALVNQAYNLLKAPTSRANYLLHLHGIDALGDTTTFVDPATLMAIMEAREEIEECTSMDELDRHKAHNANQIEACMQKLAEAFDSNQDFDTSKRLTVELQYLVKLSEAILDKQDHLD 237
BLAST of NO06G02240 vs. NCBI_GenBank
Match: OQR86988.1 (hypothetical protein ACHHYP_09618 [Achlya hypogyna]) HSP 1 Score: 154.5 bits (389), Expect = 6.800e-34 Identity = 86/197 (43.65%), Postives = 116/197 (58.88%), Query Frame = 0 Query: 159 CWACGKPTGCCNFFCA-CGKIQPL--IGHCSYFETFGLPKSYDLDPKELERAFFELQKTMHPDRYMQKSSTEQDFSRSNSTYVNVAYRTLKDPTLRAKYLLQLEGVRALDERSKTADPALLMEVMELREEVDESRKPEALIRLIRRNRKAIDAVKKELIQLYT-EKEWTRMVALTNRLQYLSKVGFEAREKLDLLEG 352 CW CGK CC FFCA C IQPL G C+YF+ FG+P+++ +DPK +E+ ++ LQK MHPD Y KS TE++ S NS +N AY LK PT RA YLL L G+ AL + + DPA+LM +ME RE+VD+ E L L + N I+ ++ + + LT +LQYL K+ EK + LEG Sbjct: 57 CWNCGKTNDCCVFFCASCNHIQPLHANGACNYFKIFGIPENFSIDPKAVEQLYWSLQKKMHPDLYGSKSQTEKELSVVNSAVINTAYNMLKAPTTRANYLLHLHGIDALSDNTTYMDPAILMHIMECREQVDDCTTLEELAPLKKENANDIERCVVQITSAFDGSHDLETSKRLTVQLQYLMKLAEAIVEKEEALEG 253
BLAST of NO06G02240 vs. NCBI_GenBank
Match: XP_024584894.1 (fe-s protein assembly co-chaperone [Plasmopara halstedii] >CEG48525.1 fe-s protein assembly co-chaperone [Plasmopara halstedii]) HSP 1 Score: 147.9 bits (372), Expect = 6.400e-32 Identity = 82/198 (41.41%), Postives = 117/198 (59.09%), Query Frame = 0 Query: 159 CWACGKPTGCCNFFC-ACGKIQPLIG--HCSYFETFGLPKSYDLDPKELERAFFELQKTMHPDRYMQKSSTEQDFSRSNSTYVNVAYRTLKDPTLRAKYLLQLEGVRALDERSKT-ADPALLMEVMELREEVDESRKPEALIRLIRRNRKAIDAVKKELIQLYTEK-EWTRMVALTNRLQYLSKVGFEAREKLDLLEG 352 CW C T CC+FFC +C IQP+ HC +FE F +PK++D+ + +ER +++LQK +HPD Y KS TE++ + NS VN AY+ LK P +R KYLL L G+ AL E + T DP LLM+ ME+RE + ++ P AL + + IDA+ K L ++Y K + T LQY+ K E K + L+G Sbjct: 45 CWKCHHATDCCSFFCKSCNVIQPIDKGCHCDFFEIFRVPKTFDIGQRAIERTYWDLQKRLHPDLYGSKSQTEKEIAAVNSAVVNDAYKMLKKPNMRVKYLLALHGIDALGETASTDVDPELLMQTMEIRERIADTTDPNALHEIREEVSRHIDAIIKNLKEVYDMKQDLTATTRYAIELQYMVKCAEEIEMKEEKLDG 242
BLAST of NO06G02240 vs. NCBI_GenBank
Match: XP_009520437.1 (hypothetical protein PHYSODRAFT_359419 [Phytophthora sojae] >EGZ25149.1 hypothetical protein PHYSODRAFT_359419 [Phytophthora sojae]) HSP 1 Score: 141.4 bits (355), Expect = 6.000e-30 Identity = 82/199 (41.21%), Postives = 116/199 (58.29%), Query Frame = 0 Query: 157 PPCWACGKPTGCCNFFC-ACGKIQPL--IGHCSYFETFGLPKSYDLDPKELERAFFELQKTMHPDRYMQKSSTEQDFSRSNSTYVNVAYRTLKDPTLRAKYLLQLEGVRALDERSKTA-DPALLMEVMELREEVDESRKPEALIRLIRRNRKAIDAVKKELIQLY-TEKEWTRMVALTNRLQYLSKVGFE---AREKLD 348 P CW C T CC+FFC +C IQP+ HC YFE F +PK ++L+ + +E+ ++ LQK +HPD Y KS E++ S N+ +N AY+ LK P R KYLL L G+ AL E + TA DP LLM+ ME+RE + E++ +AL + + IDAV +L ++Y +K+ LQY+ K E EKLD Sbjct: 46 PDCWKCHHATDCCSFFCGSCNAIQPINKSCHCDYFEMFKIPKHFNLEQRSIEKTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVINDAYKMLKKPNTRVKYLLALHGIDALGETASTAVDPELLMQTMEIRERIAEAQDVDALHEIRKEISDHIDAVINKLGEVYDKDKDLEATKQFAVELQYMVKCAEEIDLREEKLD 244
BLAST of NO06G02240 vs. NCBI_GenBank
Match: GAY04882.1 (Hypothetical protein PINS_012707 [Pythium insidiosum]) HSP 1 Score: 139.8 bits (351), Expect = 1.700e-29 Identity = 82/200 (41.00%), Postives = 119/200 (59.50%), Query Frame = 0 Query: 159 CWACGKPTGCCNFFC-ACGKIQPLIG--HCSYFETFGLPKSYDLDPKELERAFFELQKTMHPDRYMQKSSTEQDFSRSNSTYVNVAYRTLKDPTLRAKYLLQLEGVRALDERSKTA-DPALLMEVMELREEVDESRKPEALIRLIRRNRKAIDAVKKELIQLYTEK---EWTRMVALTNRLQYLSKVGFEAREKLDLLEG 352 CW C T CC+FFC AC IQP+ G HC YF F +PK+++++ +++E+ ++ LQK +HPD Y KS E++ S N+ VN AY+ LK P R KYLL L G+ AL E + TA DP LL++ +E+RE +D++ L L IDAV +L + Y +K + TR +A+ LQY+ K E + + LEG Sbjct: 467 CWNCSHATDCCSFFCGACNAIQPIHGGQHCDYFALFQIPKNFNVEQRKMEQTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVVNEAYKMLKTPNTRVKYLLALHGIDALSETASTAVDPRLLLQTIEIRERIDDASSLADLDALRVEISAQIDAVIGKLGEAYDQKKDLDATRQLAV--ELQYMVKCAEEIDHREEQLEG 664
BLAST of NO06G02240 vs. NCBI_GenBank
Match: ETI46729.1 (Fe-S protein assembly co-chaperone HscB [Phytophthora parasitica P1569] >ETK86651.1 Fe-S protein assembly co-chaperone HscB [Phytophthora parasitica] >ETL40062.1 Fe-S protein assembly co-chaperone HscB [Phytophthora parasitica] >ETM46487.1 Fe-S protein assembly co-chaperone HscB [Phytophthora parasitica] >ETP16522.1 Fe-S protein assembly co-chaperone HscB [Phytophthora parasitica CJ01A1] >ETP44580.1 Fe-S protein assembly co-chaperone HscB [Phytophthora parasitica P10297]) HSP 1 Score: 138.7 bits (348), Expect = 3.900e-29 Identity = 82/201 (40.80%), Postives = 119/201 (59.20%), Query Frame = 0 Query: 157 PPCWACGKPTGCCNFFC-ACGKIQPLIG--HCSYFETFGLPKSYDLDPKELERAFFELQKTMHPDRYMQKSSTEQDFSRSNSTYVNVAYRTLKDPTLRAKYLLQLEGVRALDERSKTA-DPALLMEVMELREEVDESRKPEALIRLIRRNRKAIDAVKKELIQLY---TEKEWTRMVALTNRLQYLSKVGFE---AREKLD 348 P CW C T CC+FFC +C IQP+ HC YFE F +PK+++L+ + +E+ ++ LQK +HPD Y KS E++ S N+ +N AY+ LK P R KYLL L G+ AL E + TA DP LLM+ ME+RE + E+ AL + + + ID++ +L ++Y + E T+ A+ LQY+ K E EKLD Sbjct: 66 PDCWKCHHATDCCSFFCKSCNAIQPIDKGCHCDYFEMFKVPKNFNLEQRSIEKTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVINDAYKMLKTPNTRVKYLLALHGIDALGETASTAVDPELLMQTMEIRERIAEAPDVNALHEIRKEISEHIDSIINKLGEVYDKDQDLESTKQYAV--ELQYMVKCAEEIDLREEKLD 264
BLAST of NO06G02240 vs. NCBI_GenBank
Match: XP_008905798.1 (Fe-S protein assembly co-chaperone HscB [Phytophthora parasitica INRA-310] >ETN09237.1 Fe-S protein assembly co-chaperone HscB [Phytophthora parasitica INRA-310] >ETO75426.1 Fe-S protein assembly co-chaperone HscB [Phytophthora parasitica P1976] >KUF79951.1 Iron-sulfur cluster co-chaperone protein HscB [Phytophthora nicotianae]) HSP 1 Score: 138.7 bits (348), Expect = 3.900e-29 Identity = 82/201 (40.80%), Postives = 119/201 (59.20%), Query Frame = 0 Query: 157 PPCWACGKPTGCCNFFC-ACGKIQPLIG--HCSYFETFGLPKSYDLDPKELERAFFELQKTMHPDRYMQKSSTEQDFSRSNSTYVNVAYRTLKDPTLRAKYLLQLEGVRALDERSKTA-DPALLMEVMELREEVDESRKPEALIRLIRRNRKAIDAVKKELIQLY---TEKEWTRMVALTNRLQYLSKVGFE---AREKLD 348 P CW C T CC+FFC +C IQP+ HC YFE F +PK+++L+ + +E+ ++ LQK +HPD Y KS E++ S N+ +N AY+ LK P R KYLL L G+ AL E + TA DP LLM+ ME+RE + E+ AL + + + ID++ +L ++Y + E T+ A+ LQY+ K E EKLD Sbjct: 47 PDCWKCHHATDCCSFFCKSCNAIQPIDKGCHCDYFEMFKVPKNFNLEQRSIEKTYWNLQKRLHPDLYGSKSEFEKELSAVNAAVINDAYKMLKTPNTRVKYLLALHGIDALGETASTAVDPELLMQTMEIRERIAEAPDVNALHEIRKEISEHIDSIINKLGEVYDKDQDLESTKQYAV--ELQYMVKCAEEIDLREEKLD 245 The following BLAST results are available for this feature:
BLAST of NO06G02240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02240 ID=NO06G02240|Name=NO06G02240|organism=Nannochloropsis oceanica|type=gene|length=2580bpback to top protein sequence of NO06G02240.1 >NO06G02240.1-protein ID=NO06G02240.1-protein|Name=NO06G02240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=381bpback to top Synonyms
Publications
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