NO06G02140, NO06G02140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO06G02140 vs. NCBI_GenBank
Match: EWM26241.1 (hypothetical protein Naga_100025g46 [Nannochloropsis gaditana]) HSP 1 Score: 338.6 bits (867), Expect = 5.500e-89 Identity = 374/827 (45.22%), Postives = 459/827 (55.50%), Query Frame = 0 Query: 14 HDERDRNDSAPPFFGASSASLSPLRSSVHRREGNSCSGTSSSPSPHQWGDRNAPFIASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHYDSSRLQSLIISKEKELHDINHFRIHTLESLLKDRDRALAENNEKIQRLKTDFQYNLHLIEERDAELDRADAAIASLQETLRTQVHENEDMRQALTEAEQAGRRKAARIEAETXXXXXXXXXXXXXXXXXXXXXXXXEWMRRHTSEMESMKREYEGQMLAREDGWRAVEEGLRGEISRLEERKAALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLKAAEAAFEQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVRERLLRAEERAARAEKGMRDLRKEMEERVMGKMREGEAAELQHAEEIERKEVLILDVKTSLWEAEAEGRRMTLRVGEMGKMIEGKEREMGKMKEQIEHLRTLLVEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSEGEAARLRAQ------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDLLEEGALVEENVRLRTAISEMRHEMERLKFID-AGRSRDVGRVTAAGEGDGGNGESR----------------TMTTEGKWGGMLLLENRRLREENKKLSGTCDKLMGISSELNARLNKLSTWAPALEGDGHDWQGRNDDGEDMEEGSHTGPPARTKKPHPHRALQQRNPTTSTTASNTRGEGLFLDGQPQMTTTSVSTTRRLLNPP---LASARETQGQKDALSRLKSRKGAAAASLAAAKQKVRNYNER 815 HD RD D APPFFGASS S SPLR S+ R + S +G +S +Q GD AP IAS YDSSRLQSLI+SKEKELHDIN FRIHTLESLLKDR+RAL ENN+KIQ LK DFQYNL LIEERDAELDRADA +A L++T+R Q HE+E +RQAL EAEQ +R+AARI A+ XXXXXXXXXXX +H + +ES+++E+E + LA+E+ WR + L E SR+E +AA + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +R++R+EMEER+ ++RE +A E HA+E+ERKE L++ +K+ LWE+EAEGR +T+RVG++GK IE K+RE+ + +EQ+E RTLLVEER R S+ EA+ LRA+ L+EEGALV+ENVRLRT IS+MRHEMERL D GR+R + G G GG+ E +TEGK G MLL ENRR STW L+G + R DG ME+G P R K P + +P S AS +R L + G+ + +V+T++ P LASARETQGQK+AL+RL+SR AA+ +AA +QKVRNYNER Sbjct: 33 HDYRDHRDDAPPFFGASSTSTSPLR-SIDRSKAPSNTGLNSVHHRYQCGD--APSIASYSPTHPHSVPSRPHLLDDSVPPASADPPL---------------YDSSRLQSLIMSKEKELHDINQFRIHTLESLLKDRERALKENNDKIQGLKADFQYNLQLIEERDAELDRADATVAKLEDTVRAQAHESEALRQALAEAEQGSKRQAARIAADMEAAFARREQEMGQXXXXXXXXXXXXXXXQHRAHIESLRQEWESEWLAKEEAWRERVDRLGEETSRMERERAAREQAVARGAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQALREVRREMEERMATRLREEDAREGLHAQEVERKEALLVKMKSQLWESEAEGRELTMRVGDLGKRIEEKDRELVRTREQLEQFRTLLVEER----QESERRVAEEGQGRHPGGKTVEVEELKAELRASQREASTLRARAADLEDVARRSTPKGDERAARQQEAVLDDTLAARRTASLVEEGALVQENVRLRTIISDMRHEMERLTLADKGGRAR-----SGQGRGQGGDREDHATAAGDEAVGVSIPFAATSTEGKLGNMLLSENRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTW--TLQGGVE--EARGIDG--MEKG-----PVRAKGGKPRSLHRTDSPPPSAQAS-SREASLSIAGR----SAAVATSKADYQAPGSFLASARETQGQKNALNRLRSR--TAASGVAALRQKVRNYNER 814
BLAST of NO06G02140 vs. NCBI_GenBank
Match: CBJ25779.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 83.6 bits (205), Expect = 3.200e-12 Identity = 46/103 (44.66%), Postives = 72/103 (69.90%), Query Frame = 0 Query: 121 LQSLIISKEKELHDINHFRIHTLESLLKDRDRALAENNEKIQRLKTDFQYNLHLIEERDAELDRADAAIASLQETLRTQVHENEDMRQALTEAEQAGRRKAAR 224 L+ LI +KE+ELH+I+ FR+ +LE LL++R+ LA++ + +LK DF++NL LIE+RD EL R +AA+ L+E+LR + E +++ L EA R+ AAR Sbjct: 161 LRQLIETKERELHEIHDFRLRSLEGLLEEREATLADSFARYDKLKEDFKFNLGLIEDRDVELGRYEAALQGLKESLRDKEVEASEVKMRLDEALCVNRQAAAR 263
BLAST of NO06G02140 vs. NCBI_GenBank
Match: XP_002904709.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY53091.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 83.6 bits (205), Expect = 3.200e-12 Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 0 Query: 114 AHYDSSRLQSLIISKEKELHDINHFRIHTLESLLKDRDRALAENNEKIQRLKTDFQYNLHLIEERDAELDRADAAIASLQETLRTQVHENEDMR 208 A S ++SLI+ KEKELHDIN +RI TLE+LL+D++ A +K+ +L+ DF+YNL L+E RD EL DA ASL+ LR + E + R Sbjct: 16 ARVGPSNIRSLILEKEKELHDINEYRIRTLEALLRDKETAATAAKQKLSKLQEDFKYNLKLLEGRDEELALYDANFASLKNVLRDREAELSENR 109
BLAST of NO06G02140 vs. NCBI_GenBank
Match: XP_009520635.1 (hypothetical protein PHYSODRAFT_487404 [Phytophthora sojae] >EGZ25347.1 hypothetical protein PHYSODRAFT_487404 [Phytophthora sojae]) HSP 1 Score: 82.4 bits (202), Expect = 7.000e-12 Identity = 48/110 (43.64%), Postives = 70/110 (63.64%), Query Frame = 0 Query: 114 AHYDSSRLQSLIISKEKELHDINHFRIHTLESLLKDRDRALAENNEKIQRLKTDFQYNLHLIEERDAELDRADAAIASLQETLRTQVHENEDMR----QALTEAEQAGRR 220 A ++SLI+ KEKELHDIN +RI TLE+LL+D++ A +K+ +L+ DF+YNL L+E RD EL DA ASL+ LR + E ++R + L E ++A +R Sbjct: 13 ARVGPGNIRSLILEKEKELHDINEYRIRTLEALLRDKETAAGAAKQKLGKLQEDFKYNLKLLEGRDEELALYDANFASLKTVLRDREAELSELRAREAELLAELQRAKQR 122
BLAST of NO06G02140 vs. NCBI_GenBank
Match: ETI46965.1 (hypothetical protein F443_08718 [Phytophthora parasitica P1569]) HSP 1 Score: 80.1 bits (196), Expect = 3.500e-11 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0 Query: 114 AHYDSSRLQSLIISKEKELHDINHFRIHTLESLLKDRDRALAENNEKIQRLKTDFQYNLHLIEERDAELDRADAAIASLQETLRTQVHENED--MRQALTEAEQAGRRKAA 223 A ++SLI+ KEKELHDIN +RI TLE+LL+D++ A +K+ +L+ DF+YNL L+E RD EL DA ASL+ +R + E + R+A +AE +K A Sbjct: 16 ARVGPGNIRSLILEKEKELHDINEYRIRTLEALLRDKETAATAAKQKLNKLQEDFKYNLKLLEGRDEELALYDANFASLKNVVRDREAELSESRAREAEFQAELQRAKKRA 126
BLAST of NO06G02140 vs. NCBI_GenBank
Match: ETK86902.1 (hypothetical protein L915_08544 [Phytophthora parasitica]) HSP 1 Score: 80.1 bits (196), Expect = 3.500e-11 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0 Query: 114 AHYDSSRLQSLIISKEKELHDINHFRIHTLESLLKDRDRALAENNEKIQRLKTDFQYNLHLIEERDAELDRADAAIASLQETLRTQVHENED--MRQALTEAEQAGRRKAA 223 A ++SLI+ KEKELHDIN +RI TLE+LL+D++ A +K+ +L+ DF+YNL L+E RD EL DA ASL+ +R + E + R+A +AE +K A Sbjct: 16 ARVGPGNIRSLILEKEKELHDINEYRIRTLEALLRDKETAATAAKQKLNKLQEDFKYNLKLLEGRDEELALYDANFASLKNVVRDREAELSESRAREAEFQAELQRAKKRA 126
BLAST of NO06G02140 vs. NCBI_GenBank
Match: XP_008905554.1 (hypothetical protein PPTG_11060 [Phytophthora parasitica INRA-310] >ETN08993.1 hypothetical protein PPTG_11060 [Phytophthora parasitica INRA-310]) HSP 1 Score: 80.1 bits (196), Expect = 3.500e-11 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0 Query: 114 AHYDSSRLQSLIISKEKELHDINHFRIHTLESLLKDRDRALAENNEKIQRLKTDFQYNLHLIEERDAELDRADAAIASLQETLRTQVHENED--MRQALTEAEQAGRRKAA 223 A ++SLI+ KEKELHDIN +RI TLE+LL+D++ A +K+ +L+ DF+YNL L+E RD EL DA ASL+ +R + E + R+A +AE +K A Sbjct: 16 ARVGPGNIRSLILEKEKELHDINEYRIRTLEALLRDKETAATAAKQKLNKLQEDFKYNLKLLEGRDEELALYDANFASLKNVVRDREAELSESRAREAEFQAELQRAKKRA 126
BLAST of NO06G02140 vs. NCBI_GenBank
Match: ETP16761.1 (hypothetical protein F441_08691 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 80.1 bits (196), Expect = 3.500e-11 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0 Query: 114 AHYDSSRLQSLIISKEKELHDINHFRIHTLESLLKDRDRALAENNEKIQRLKTDFQYNLHLIEERDAELDRADAAIASLQETLRTQVHENED--MRQALTEAEQAGRRKAA 223 A ++SLI+ KEKELHDIN +RI TLE+LL+D++ A +K+ +L+ DF+YNL L+E RD EL DA ASL+ +R + E + R+A +AE +K A Sbjct: 16 ARVGPGNIRSLILEKEKELHDINEYRIRTLEALLRDKETAATAAKQKLNKLQEDFKYNLKLLEGRDEELALYDANFASLKNVVRDREAELSESRAREAEFQAELQRAKKRA 126
BLAST of NO06G02140 vs. NCBI_GenBank
Match: KUF88876.1 (Coiled-coil domain-containing protein 57 [Phytophthora nicotianae]) HSP 1 Score: 80.1 bits (196), Expect = 3.500e-11 Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0 Query: 114 AHYDSSRLQSLIISKEKELHDINHFRIHTLESLLKDRDRALAENNEKIQRLKTDFQYNLHLIEERDAELDRADAAIASLQETLRTQVHENED--MRQALTEAEQAGRRKAA 223 A ++SLI+ KEKELHDIN +RI TLE+LL+D++ A +K+ +L+ DF+YNL L+E RD EL DA ASL+ +R + E + R+A +AE +K A Sbjct: 16 ARVGPGNIRSLILEKEKELHDINEYRIRTLEALLRDKETAATAAKQKLNKLQEDFKYNLKLLEGRDEELALYDANFASLKNVVRDREAELSESRAREAEFQAELQRAKKRA 126
BLAST of NO06G02140 vs. NCBI_GenBank
Match: ETL40320.1 (hypothetical protein L916_08470 [Phytophthora parasitica]) HSP 1 Score: 79.7 bits (195), Expect = 4.600e-11 Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 0 Query: 114 AHYDSSRLQSLIISKEKELHDINHFRIHTLESLLKDRDRALAENNEKIQRLKTDFQYNLHLIEERDAELDRADAAIASLQETLRTQVHENEDMRQALTEAEQAGRRKAAR 224 A ++SLI+ KEKELHDIN +RI TLE+LL+D++ A +K+ +L+ DF+YNL L+E RD EL DA ASL+ +R + E + R E + +R R Sbjct: 16 ARVGPGNIRSLILEKEKELHDINEYRIRTLEALLRDKETAATAAKQKLNKLQEDFKYNLKLLEGRDEELALYDANFASLKNVVRDREAELSESRAREAEFQAELQRAKQR 125 The following BLAST results are available for this feature:
BLAST of NO06G02140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02140 ID=NO06G02140|Name=NO06G02140|organism=Nannochloropsis oceanica|type=gene|length=3183bpback to top protein sequence of NO06G02140.1 >NO06G02140.1-protein ID=NO06G02140.1-protein|Name=NO06G02140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=815bpback to top Synonyms
Publications
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