NO06G02120, NO06G02120 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02120 vs. NCBI_GenBank
Match: EWM26217.1 (wd repeat containing protein [Nannochloropsis gaditana]) HSP 1 Score: 181.4 bits (459), Expect = 6.300e-42 Identity = 236/331 (71.30%), Postives = 260/331 (78.55%), Query Frame = 0 Query: 95 CTPPSGPYRSAGVLGRRCKAVSSLKFSGNGQLLAAASADTTITIWDPIKRTQVRELKGGHTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXETGQEMGKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVKWAPNGEYVLVSSLDSMIRLWGMRSPSRVVKTYQGHRNERLCMSAAFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSGSEDGKVYLWDVRTGRFVQALGGHKAAVLSLAVHPSRGVLASGGTSGDGVIRLW 426 C P +GPY++AG LG++ +AVSSLKFSG+G+LLAAASADTTI+IWDP KR VRELKGG XXXXXXXXXXXXXXXXXXXXXXXXXXXX TGQE+G+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V++APNG VLVS+LDS +RLW + SPS V KTYQGH+N RLC A + V SGSEDGKVY+WDV++ VQ LGGH+ AVLSLA HP+ GVLASGGT+ D IRLW Sbjct: 81 CAPEAGPYQAAGSLGKQRRAVSSLKFSGSGELLAAASADTTISIWDPKKRLLVRELKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGQELGRFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSHVRYAPNGRSVLVSTLDSTVRLWKVASPSAVTKTYQGHQNLRLCTFACY--------------CAPDGAAASGQGHKNGPQYVSSGSEDGKVYVWDVQSQALVQTLGGHQDAVLSLAAHPTDGVLASGGTTADRSIRLW 397
BLAST of NO06G02120 vs. NCBI_GenBank
Match: ADD95799.1 (GF13915 [uncultured organism MedDCM-OCT-S08-C3] >ADD96407.1 GF13915 [uncultured organism MedDCM-OCT-S09-C25]) HSP 1 Score: 108.2 bits (269), Expect = 6.800e-20 Identity = 55/138 (39.86%), Postives = 72/138 (52.17%), Query Frame = 0 Query: 288 VKWAPNGEYVLVSSLDSMIRLWGMRSPSRVVKTYQGHRNERLCMSAAFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSGSEDGKVYLWDVRTGRFVQALGGHKAAVLSLAVHPSRGVLASGGTSGDGVIRLW 426 VK++PNG Y+LV +LD +RLW + +PSR VKTYQGH N C+ + F VVSGSED VYLW ++ VQ L GH VLS++ HP+ +ASGG+ D +RLW Sbjct: 98 VKYSPNGRYILVGTLDDRLRLWNVSNPSRCVKTYQGHTNRSFCIFSTF------------------------STTHTRTPLVVSGSEDKSVYLWHLQNRSIVQKLEGHTDTVLSVSCHPTEHRIASGGSGQDKTVRLW 211
BLAST of NO06G02120 vs. NCBI_GenBank
Match: PSN64379.1 (WD40 repeat-like protein [Corynespora cassiicola Philippines]) HSP 1 Score: 97.1 bits (240), Expect = 1.600e-16 Identity = 55/139 (39.57%), Postives = 74/139 (53.24%), Query Frame = 0 Query: 288 VKWAPNGEYVLVSSLDSMIRLWG-MRSPSRVVKTYQGHRNERLCMSAAFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSGSEDGKVYLWDVRTGRFVQALGGHKAAVLSLAVHPSRGVLASGGTSGDGVIRLW 426 V ++PNG+YVL +LDS IRLW + + VKTYQGH N+R +S AF V SGSEDG++ LWDV + +Q L GH AVLS+A HP++ ++ASGG D +R+W Sbjct: 208 VIFSPNGKYVLAWTLDSCIRLWNYIEGKGKCVKTYQGHINKRYSLSGAF--------------------GTYGGQPPYQYAFVASGSEDGEIVLWDVSSKNVLQRLEGHSEAVLSVATHPTQELIASGGL--DRTVRIW 324
BLAST of NO06G02120 vs. NCBI_GenBank
Match: XP_012397298.1 (WD repeat-containing protein 5-like [Sarcophilus harrisii]) HSP 1 Score: 96.3 bits (238), Expect = 2.700e-16 Identity = 49/142 (34.51%), Postives = 70/142 (49.30%), Query Frame = 0 Query: 288 VKWAPNGEYVLVSSLDSMIRLWGMRSPSRVVKTYQGHRNERLCMSAAFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSGSEDGKVYLWDVRTGRFVQALGGHKAAVLSLAVHPSRGVLASGGTSGDGVIRLWCTKE 430 VK+ PNGEY+L+++LD+ ++LW + +KTY GH+NE+ C+ A F +VSGSED VY+W++ T VQ L GH V+S A HP ++AS D I+LW E Sbjct: 215 VKFTPNGEYILIATLDNTLKLWDF-GKGKCLKTYTGHKNEKYCIFANF--------------------------SETNPQQIVSGSEDNIVYIWNIDTEEIVQKLYGHTDTVISTACHPKESIIASAALEKDKTIKLWKNSE 329
BLAST of NO06G02120 vs. NCBI_GenBank
Match: OAL44971.1 (WD40 repeat-like protein [Pyrenochaeta sp. DS3sAY3a]) HSP 1 Score: 95.9 bits (237), Expect = 3.500e-16 Identity = 72/151 (47.68%), Postives = 90/151 (59.60%), Query Frame = 0 Query: 288 VKWAPNGEYVLVSSLDSMIRLWG-MRSPSRVVKTYQGHRNERLCMSAAFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSGSEDGKVYLWDVRTGRFVQALGGHKAAVLSLAVHPSRGVLASGGTSGDGVIRLWCTKEEAQEVLME 438 V+++PNG+YVL +LDS IRLW + + VKTYQGH NER +S AF XXXXXXXXXXXXXXX + SGSEDG + LWDV + +Q L GH AVLS+ HP+ ++AS G D +RL EE E +E Sbjct: 283 VRFSPNGKYVLAWTLDSSIRLWNYIDGKGKCVKTYQGHANERFSLSGAF----GTYLTVXXXXXXXXXXXXXXXPAHVEYAFIASGSEDGSIVLWDVSSKNVLQRLDGHSDAVLSVDTHPTEKIIASAGL--DRTVRLNGLGEEDMETDLE 427
BLAST of NO06G02120 vs. NCBI_GenBank
Match: KOB58077.1 (Will die slowly, partial [Operophtera brumata]) HSP 1 Score: 94.4 bits (233), Expect = 1.000e-15 Identity = 47/138 (34.06%), Postives = 71/138 (51.45%), Query Frame = 0 Query: 288 VKWAPNGEYVLVSSLDSMIRLWGMRSPSRVVKTYQGHRNERLCMSAAFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSGSEDGKVYLWDVRTGRFVQALGGHKAAVLSLAVHPSRGVLASGGTSGDGVIRLW 426 VK++PNG+Y+L ++LD+ ++LW S + +KTY GH+NE+ C+ A F +VSGSED VY+W++++ VQ L GH VL A HP+ ++AS D I+LW Sbjct: 25 VKFSPNGKYILAATLDNTLKLWDY-SRGKCLKTYNGHKNEKYCIFANF----------SVTGGKSPLFPILWVDPNVCLQWIVSGSEDNLVYIWNLQSKEIVQRLSGHTDTVLCTACHPTENIIASAALENDKTIKLW 151
BLAST of NO06G02120 vs. NCBI_GenBank
Match: XP_007783252.1 (hypothetical protein W97_07432 [Coniosporium apollinis CBS 100218] >EON67935.1 hypothetical protein W97_07432 [Coniosporium apollinis CBS 100218]) HSP 1 Score: 94.0 bits (232), Expect = 1.300e-15 Identity = 51/142 (35.92%), Postives = 70/142 (49.30%), Query Frame = 0 Query: 288 VKWAPNGEYVLVSSLDSMIRLWGMRSPSRVVKTYQGHRNERLCMSAAFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSGSEDGKVYLWDVRTGRFVQALGGHKAAVLSLAVHPSRGVLASGGTSGDGVIRLWCTKE 430 V+++PNG+YVL +LDS +RLW R VKTYQGH+NER + AF + SGSEDG ++LWDV + +Q L GH V+ + HPS L SGG D +R+W + + Sbjct: 295 VRFSPNGKYVLAWTLDSSVRLWNY-VEGRCVKTYQGHKNERFSLGGAF---------------------GTYGDVANPHAFIASGSEDGSIFLWDVSSKNVLQRLEGHDGPVMGVHTHPSERKLVSGGL--DKTVRVWVSDD 412
BLAST of NO06G02120 vs. NCBI_GenBank
Match: ORY01341.1 (WD40-repeat-containing domain protein, partial [Clohesyomyces aquaticus]) HSP 1 Score: 94.0 bits (232), Expect = 1.300e-15 Identity = 51/143 (35.66%), Postives = 71/143 (49.65%), Query Frame = 0 Query: 288 VKWAPNGEYVLVSSLDSMIRLWG-MRSPSRVVKTYQGHRNERLCMSAAFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSGSEDGKVYLWDVRTGRFVQALGGHKAAVLSLAVHPSRGVLASGGTSGDGVIRLWCTKE 430 V+++PNG+Y+L +LDS +RLW + + VKTYQGH N + +S AF + SGSEDG + LWDV + +Q L GH A VLS+ HP+ + SGG D +R+W KE Sbjct: 281 VRFSPNGKYILAWTLDSCVRLWNYIDGKGKCVKTYQGHENNKFSISGAF--------------------GTYGAEPPHQYAFIASGSEDGGIVLWDVSSKNVLQRLAGHSAPVLSVDTHPTEQAIVSGGL--DKTVRIWRYKE 401
BLAST of NO06G02120 vs. NCBI_GenBank
Match: XP_003037535.1 (hypothetical protein SCHCODRAFT_47625 [Schizophyllum commune H4-8] >EFJ02633.1 hypothetical protein SCHCODRAFT_47625 [Schizophyllum commune H4-8]) HSP 1 Score: 91.7 bits (226), Expect = 6.600e-15 Identity = 48/138 (34.78%), Postives = 71/138 (51.45%), Query Frame = 0 Query: 288 VKWAPNGEYVLVSSLDSMIRLWGMRSPSRVVKTYQGHRNERLCMSAAFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSGSEDGKVYLWDVRTGRFVQALGGHKAAVLSLAVHPSRGVLASGGTSGDGVIRLW 426 V++ PN ++VL S+ DS +RLW + SR KTY GH N C+ + F V+SGSED +VY+WD+++ + VQ L GHK VL ++VHP++ +LA+ D IR+W Sbjct: 244 VRFTPNSKFVLASTQDSTVRLWNYHA-SRPAKTYTGHVNRTYCIPSCFA------------------------TSRTGERLVLSGSEDARVYIWDLQSRQLVQVLEGHKDVVLGVSVHPTKCMLATAAMEKDLTIRIW 356
BLAST of NO06G02120 vs. NCBI_GenBank
Match: OCL04777.1 (WD40 repeat-like protein [Glonium stellatum]) HSP 1 Score: 91.3 bits (225), Expect = 8.600e-15 Identity = 51/146 (34.93%), Postives = 71/146 (48.63%), Query Frame = 0 Query: 288 VKWAPNGEYVLVSSLDSMIRLWG-MRSPSRVVKTYQGHRNERLCMSAAFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSGSEDGKVYLWDVRTGRFVQALGGHKAAVLSLAVHPSRGVLASGGTSGDGVIRLWCTKEEAQ 433 V ++PNG+Y+L +LDS IRLW + R VKTYQGH N + +S AF V SGSED + LWDV + +Q L GH VL + HP++ ++ SGG D +R+W + E+ Q Sbjct: 287 VCFSPNGKYILAWTLDSCIRLWNYVEGKGRCVKTYQGHTNNKYSISGAF---------------------GVYGCPPCQYAFVASGSEDKTIVLWDVSSKNVMQRLEGHTGVVLGVDTHPTQAIIVSGG--ADRTVRIWRSDEDMQ 409 The following BLAST results are available for this feature:
BLAST of NO06G02120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02120 ID=NO06G02120|Name=NO06G02120|organism=Nannochloropsis oceanica|type=gene|length=1664bpback to top protein sequence of NO06G02120.1 >NO06G02120.1-protein ID=NO06G02120.1-protein|Name=NO06G02120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=460bpback to top Synonyms
Publications
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