NO06G02080, NO06G02080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02080 vs. NCBI_GenBank
Match: EWM26232.1 (Chromatin associated protein KTI12 [Nannochloropsis gaditana]) HSP 1 Score: 232.6 bits (592), Expect = 1.700e-57 Identity = 152/335 (45.37%), Postives = 207/335 (61.79%), Query Frame = 0 Query: 1 MCGLPGAGKSYWASRLHSSAISRKGGETRFDDDVRHVDFDAVEAGLLREGSGKDNSNRIDTWHSARVMALEQAQDILLEE--------VAERHRVVVVLDDNMYYASMRREAYQLAARYGVGYGCLHVATPLDVALVQNKSRPAGRSVTEEVIRRMHTKLQVPDPNTRSWEANTVAIGNITTLETQDNE--AETLRKIWTVIERGYKTPATIVEVSSAEEEVAKEEARQRTRGSLLHATELMLRKIIGTAMQLVAAGDGLFNVKPSSFGPRFSAAKAAVMREVGKGNAQSFTQDWILQQADAKNILVGKLFIAMR-EKGREEETAALLELERQTL 325 MCGLP AGKSYW RL SA SR G+ + +V+ ++FDA+EA L E G + I WH AR AL QA+ IL +E +++ R +++LDDNMYYASMRR+ Y +AAR G GYGC+HV ++ AL QN RP + V E+VIRRM+ +L+ P+ +TR WE NT+ I E Q+ E A TL KIW+V+ERG++ PA I + S EEE KE RQ+ R S++H EL LR++IGTAM L+A D + SS G F AK VM+ + +A TQD L++ D + +L LF A+R E G +E+T + ELE++TL Sbjct: 11 MCGLPAAGKSYWGCRLQDSASSRYPGK---ECEVQRIEFDAIEARLREEDEG---LHPIAVWHRARSKALAQAESILHQERGSSTPVGLSKPSRRILILDDNMYYASMRRKVYLMAARNGAGYGCVHVDISVEDALSQNMKRPLRQRVDEKVIRRMNARLEAPNKSTRRWETNTLVI------ERQEEEVGARTLDKIWSVVERGWEAPAFIPK-SCFEEEAKKERDRQKVRESVVHTAELALRRVIGTAM-LLAGTDVRLSGTLSSLGRGFQVAKTEVMKRFREKSAFFVTQD-TLEKRDVE-LLTKSLFAAIRGEFGNDEKTWS--ELEKKTL 327
BLAST of NO06G02080 vs. NCBI_GenBank
Match: XP_004353408.1 (chromatin associated protein kti12 protein [Acanthamoeba castellanii str. Neff] >ELR23880.1 chromatin associated protein kti12 protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 111.7 bits (278), Expect = 4.400e-21 Identity = 70/206 (33.98%), Postives = 105/206 (50.97%), Query Frame = 0 Query: 1 MCGLPGAGKSYWASRLHSSAISRKGGETRFDDDVRHVDFDAVEAGLLREGSGKDNSNRI----DTWHSARVMALEQAQDILLEEVAERH-------RVVVVLDDNMYYASMRREAYQLAARYGVGYGCLHVATPLDVALVQNKSRPAGRSVTEEVIRRMHTKLQVPDPNTRSWEANTVAIGNITTLETQDNEAET---LRKIWTVI 193 +CGLPGAGKS A RL S+ + GE + +V H+ FD V+ G + S + I D W +R +AL + + + E + R ++V+DDNMYY SMR + Y LA ++ V YG ++V PL VAL +N R V +E+I RMH + + P P WE +T + E + +A L+++W I Sbjct: 10 LCGLPGAGKSTLARRLAQSSATHIDGELQV--EVHHISFDDVDIGGVVAASSEVEEVAIDFEADRWCRSRALALLEVERRIDESRQTNNSIGTCVSRRLIVVDDNMYYRSMRHQCYLLAKKHEVPYGQVYVEVPLAVALARNARRTGSARVPDEIIERMHARFEAPQPADHGWERHTCVVHPQREEEEPEGDAAADLDLQRLWQAI 213
BLAST of NO06G02080 vs. NCBI_GenBank
Match: XP_008608029.1 (hypothetical protein SDRG_04146 [Saprolegnia diclina VS20] >EQC38437.1 hypothetical protein SDRG_04146 [Saprolegnia diclina VS20]) HSP 1 Score: 111.7 bits (278), Expect = 4.400e-21 Identity = 83/273 (30.40%), Postives = 130/273 (47.62%), Query Frame = 0 Query: 1 MCGLPGAGKSYWASRLHSSAISRKGGETRFDDDVRHVDFDAVEAGLLREGSGKDNSNRIDTWHSARVMALEQAQDILLEEVAERHRVVVVLDDNMYYASMRREAYQLAARYGVGYGCLHVATPLDVALVQNKSRPAGRSVTEEVIRRMHTKLQVPDPNTRSWEANTVAIGNITTLETQDNEAETLRKIWTVIERGYKTPATIVEVSSAEEE-VAKEEARQRTRGSLLHATELMLRKIIGTAMQLVAAGDGLFNVKPSSFGPRFSAAKAAVMRE 273 +CGLPGAGKS +A L +A+ +V ++ FD V + + D S + W A + + L V++LDDNMYY SMR++ QL + VG+G +HV TP D+ +N +RP V + V RRM Q P P+ + WEA ++ I L T D+ L +I P EV +A+E + KE +R T S+LH +L+LR+++G+ ++ + + + AK AV+R+ Sbjct: 7 LCGLPGAGKSTFARALADAALRTY--------EVHYISFDDV---FVARFAANDGSFAPEQWKDAVAAIYVEVELALAAASMSGKPRVLLLDDNMYYRSMRKKYLQLCRQRNVGFGVIHVDTPPDLCRARNAARP--NPVPDVVFRRMQALFQPPRPSAQPWEARSIVI----DLSTADSTPHALCAALAMIAEAVAAP----EVDTAQESMLEKERSRAATIASVLHRADLVLRQLVGSILRDAKESN---TTSLPTLAKHLARAKEAVLRD 255
BLAST of NO06G02080 vs. NCBI_GenBank
Match: XP_008879884.1 (hypothetical protein H310_13978 [Aphanomyces invadans] >ETV91432.1 hypothetical protein H310_13978 [Aphanomyces invadans]) HSP 1 Score: 99.8 bits (247), Expect = 1.700e-17 Identity = 72/247 (29.15%), Postives = 124/247 (50.20%), Query Frame = 0 Query: 1 MCGLPGAGKSYWASRLHSSAISRKGGETRFDDDVRHVDFDAVEAGLLREGSGKDNSNRIDTWHSARVMALEQAQDILLE-----EVAERHRVVVVLDDNMYYASMRREAYQLAARYGVGYGCLHVATPLDVALVQNKSRPAGRSVTEEVIRRMHTKLQVPDPNTRSWEANTVAIGNITTLETQDNEAETLRKIWTVIERGYKTPATIVEVSSAEEEVAKEEARQRTRGSLLHATELMLRKIIGTAMQ 243 MCGLPGAGKS S + A + G+ + V + +D + R D W R+ + + Q L E ++ V ++DDNMYY SMR+ +QLA + G+G + V T ++ +N++RP V E V RM + L+VPD ++ +WE++T+ + T L+ D T+ +W + + P + + ++A E KE +R+ R S++H + LR+++GT ++ Sbjct: 10 MCGLPGAGKS---SLCQALATHYESGD---NVSVEWICYDDIFDSFRRHDETFDPL----AWRDMRMAVVNRIQSRLREFADTADIVNHILHVFLVDDNMYYRSMRKRFHQLAREFRAGFGQVFVTTSNEICWQRNQTRPV--PVPESVFGRMASLLEVPDASSNAWESHTLQVALETELQRDDAVVRTMEFVWRIAQH----PESSLHDANALE---KEASRESNRRSVVHCLDGRLRRLVGTILR 237
BLAST of NO06G02080 vs. NCBI_GenBank
Match: GBG34490.1 (L-seryl-tRNASec kinase [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 95.1 bits (235), Expect = 4.300e-16 Identity = 86/252 (34.13%), Postives = 119/252 (47.22%), Query Frame = 0 Query: 3 GLPGAGKSYWASRLHSSAISRKGGETRFDDDVRHVDFDAVEAGLLREGSGKDNSNRIDT--WHSARVMALEQAQDIL------LEEVAERHRVVVVLDDNMYYASMRREAYQLAARYGVGYGCLHVATPLDVALVQNKSRPAGRSVTEEVIRRMHTKLQVPDPNTRSWEANTVAIGNITTLETQDNEAETLRKIWTVIERGYKTPATIVEVSSAEEEVAKEEARQRTRGSLLHATELMLRKIIGTAMQLVAA 247 GLPGAGKS R+ + A R G D V + FD E L E + K+ DT WH AR ALE+A+ L ++E ++ +V++V DDNMYY SMR QLA R G GY + V L+ A+ +N R + V +V+RRM +L+ P P RS + D++ ETL + + P E S A E A +R S H EL LR+I+G ++ V A Sbjct: 15 GLPGAGKSSLCQRIENYA--RVSGH---KDRVVLISFDDEEQSLSSECNNKETLTDFDTDIWHKARERALEKAKQALAATNDPIDESSKSIQVLLV-DDNMYYQSMRVPFRQLAERVGAGYLEIAVDCELEEAMRRNALRESPHRVPADVLRRMAGRLEPPTPGRRSLHVKS------------DDDLETL---FCAMRAASAEPEVNHEASRAAEAAA---SRASVNASATHQRELQLRRIVGEFIKKVPA 242
BLAST of NO06G02080 vs. NCBI_GenBank
Match: XP_005188129.1 (PREDICTED: L-seryl-tRNA(Sec) kinase [Musca domestica]) HSP 1 Score: 93.6 bits (231), Expect = 1.200e-15 Identity = 72/246 (29.27%), Postives = 115/246 (46.75%), Query Frame = 0 Query: 1 MCGLPGAGK-SYWASRLHSSAISRKGGETRFDDDVRHVDFDAVEAGLLREGSGKDNSNRIDTWHSARVMALEQAQDILLEEVAERHRVVVVLDDNMYYASMRREAYQLAARYGVGYGCLHVATPLDVALVQNKSRPAGRSVTEEVIRRMHTKLQVPDPNTRSWEANTVAIGNITTLETQDNEAETLR-KIWTVIERGYKTPATIVEVSSAEEEVAKEEARQRTRGSLLHATELMLRKIIGTAMQLV 245 + GLP GK S+ L ++ +D+ + + + V R+ N I W S++++ + + R+R++++ DDN +Y SMR YQ+A +YG+ YG + LD+AL QN R V EEV+ RM+TKL+VPD SWE NT TL T++ E + + I R + P +E A T+ S +H +L++RK IGT + + Sbjct: 9 LIGLPAVGKTSFCKLLLQIESVPFNVCHICYDEFIDISEENLVNYKEQRDKLLNTLDNLIGAWKSSKMINETLMKSCSAYKDNGRNRLLILCDDNHFYGSMRYRLYQIARKYGLSYGQIFFDCTLDLALQQNTVREGSHRVPEEVVTRMYTKLEVPDLKNNSWEQNTF------TLATENLNKEYISLNLVPFIVRNFAVPLKPLEF----------PATCPTKQSQVHELDLLMRKHIGTVISKI 238
BLAST of NO06G02080 vs. NCBI_GenBank
Match: XP_022086645.1 (L-seryl-tRNA(Sec) kinase-like isoform X1 [Acanthaster planci]) HSP 1 Score: 93.2 bits (230), Expect = 1.600e-15 Identity = 63/211 (29.86%), Postives = 108/211 (51.18%), Query Frame = 0 Query: 66 RVMALEQAQDILLEE---VAERHRVVVVLDDNMYYASMRREAYQLAARYGVGYGCLHVATPLDVALVQNKSRPAGRSVTEEVIRRMHTKLQVPDPNTRSWEANTVAIGNITTLETQDNEAETLRKIWTVIERGYKTPATIVEVSSAEEEVAKEEARQRTRGSLLHATELMLRKIIGTAMQLVAAGDGLFNVKPSSFGPRFSAAKAAVMREV 274 ++++L+Q Q E V VV+++DDNM+Y SMR E YQLA +Y + +++ +VAL +N R V EE +R+M +++VPD SWE +T+ I + +NEA TL +W +I P +EV +AEE +E +R S +H + LR+ + A+ G L + + G + + + V++++ Sbjct: 155 QIVSLKQPQPTSWAEGKQVQPASSVVLLIDDNMFYRSMRYEYYQLARKYNTSFCQVYLQCNTEVALARNSQR--RNVVPEETVRKMANRMEVPDRQVASWEKHTLCI----EAKGLENEA-TLSTVWALIAEALLDPVLPMEVENAEE---REASRVVCAASAIHQADQSLRRCVAEAVTAAKEGGSLSKAELRNLGSKLNDVRQTVLQKI 355
BLAST of NO06G02080 vs. NCBI_GenBank
Match: XP_022086646.1 (L-seryl-tRNA(Sec) kinase-like isoform X2 [Acanthaster planci]) HSP 1 Score: 93.2 bits (230), Expect = 1.600e-15 Identity = 63/211 (29.86%), Postives = 108/211 (51.18%), Query Frame = 0 Query: 66 RVMALEQAQDILLEE---VAERHRVVVVLDDNMYYASMRREAYQLAARYGVGYGCLHVATPLDVALVQNKSRPAGRSVTEEVIRRMHTKLQVPDPNTRSWEANTVAIGNITTLETQDNEAETLRKIWTVIERGYKTPATIVEVSSAEEEVAKEEARQRTRGSLLHATELMLRKIIGTAMQLVAAGDGLFNVKPSSFGPRFSAAKAAVMREV 274 ++++L+Q Q E V VV+++DDNM+Y SMR E YQLA +Y + +++ +VAL +N R V EE +R+M +++VPD SWE +T+ I + +NEA TL +W +I P +EV +AEE +E +R S +H + LR+ + A+ G L + + G + + + V++++ Sbjct: 91 QIVSLKQPQPTSWAEGKQVQPASSVVLLIDDNMFYRSMRYEYYQLARKYNTSFCQVYLQCNTEVALARNSQR--RNVVPEETVRKMANRMEVPDRQVASWEKHTLCI----EAKGLENEA-TLSTVWALIAEALLDPVLPMEVENAEE---REASRVVCAASAIHQADQSLRRCVAEAVTAAKEGGSLSKAELRNLGSKLNDVRQTVLQKI 291
BLAST of NO06G02080 vs. NCBI_GenBank
Match: XP_022287831.1 (L-seryl-tRNA(Sec) kinase-like [Crassostrea virginica]) HSP 1 Score: 91.7 bits (226), Expect = 4.700e-15 Identity = 58/204 (28.43%), Postives = 114/204 (55.88%), Query Frame = 0 Query: 75 DILLEEVAERH--RVVVVLDDNMYYASMRREAYQLAARYGVGYGCLHVATPLDVALVQNKSRPAGRSVTEEVIRRMHTKLQVPDPNTRSWEANTVAIGNITTLETQDNEAETLRKIWTVIERGYKTPATIVEVSSAEEEVAKEEARQRTRGSLLHATELMLRKIIGTAMQLVAAGDGLFNVKPSSFGPRFSAAKAAVMREVGKG 277 ++ L+ + R VV+++DDNMYY+SMR + YQLA +YGV + +H+ ++AL++N+ R R V ++VI +M + +VP+P+ SWE +++ + + E +N +L + V++R P T V + ++EE R+ +++H +L++RK+I M+ A+G + S K+ +++++ +G Sbjct: 117 ELFLQSLTHREDGTVVILIDDNMYYSSMRHKYYQLARKYGVAFCQVHIECDPNLALIRNRQR-LSRQVPDDVILKMAMRFEVPNPDQNSWEKHSITVNTNSGPEALEN---SLIETIEVVQRALADPMT--PVLEEVDPASREEDRKICSENMIHQADLIMRKLIAENMK-KASGRTADKTFVRTLSASLSDIKSDILQKLKRG 313
BLAST of NO06G02080 vs. NCBI_GenBank
Match: OQS00753.1 (hypothetical protein THRCLA_05870 [Thraustotheca clavata]) HSP 1 Score: 89.7 bits (221), Expect = 1.800e-14 Identity = 75/274 (27.37%), Postives = 128/274 (46.72%), Query Frame = 0 Query: 1 MCGLPGAGKSYWASRLHSSAISRKGGETRFDDDVRHVDFDAVEAGLLREGSGKDNSNRI-DTWHSARVMALEQAQDILLEEVAER--HRVVVVLDDNMYYASMRREAYQLAARYGVGYGCLHVATPLDVALVQNKSRPAGRSVTEEVIRRMHTKLQVPDPNTRSWEANTVAIGNITTLETQDNEAETLRKIWTVIERGYKTPATIVEVSSAEEEVAKEEARQRTRGSLLHATELMLRKIIGTAMQLVAAGDGLFNVKPSSFGPRFSAAKAAVMR 272 +CGLPGAGKS + + + S D+ ++ FD + A + KD++ + + W S+ Q L E + + + +LDDNMYY SMR++ YQL ++ G+ ++V T + N SR V + V RM T Q P+P +WE +T+ I ++ +N ++ + T+ E+ +K P S E +E +R+ S+LH +L LR+++G QL+ + SF A K A+++ Sbjct: 10 LCGLPGAGKSTLSKYILQAFSS--------SYDIDYLCFDTIFA-----NTSKDSTEFVPEQWQSSISSIYLHVQQSLQEHIQSTTLTKKIFLLDDNMYYRSMRKKYYQLCRQWNAGFCQIYVNTNSVICQTHNASRVF--PVPQVVFNRMETLFQAPNPTLCTWETHTLEIDHV------ENSSQITFHMETLFEKAFKNPILDHSQSLKNE---RETSRRSNEKSVLHQADLALRQLVG---QLLKDAKQTGSNNLPSFAKHLHAKKEALLQ 256 The following BLAST results are available for this feature:
BLAST of NO06G02080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02080 ID=NO06G02080|Name=NO06G02080|organism=Nannochloropsis oceanica|type=gene|length=993bpback to top protein sequence of NO06G02080.1 >NO06G02080.1-protein ID=NO06G02080.1-protein|Name=NO06G02080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=331bpback to top Synonyms
Publications
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