NO06G02060, NO06G02060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02060 vs. NCBI_GenBank
Match: EWM26245.1 (proteasome alpha5 isoform a [Nannochloropsis gaditana]) HSP 1 Score: 417.5 bits (1072), Expect = 4.400e-113 Identity = 208/317 (65.62%), Postives = 248/317 (78.23%), Query Frame = 0 Query: 10 TGPPCCVFLLVALLTICLISPLPTVHAAVEGASTGGRRVVEVYHPFPFTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVVGPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKD---------GVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPS 318 T PPC + +V L L++ + VHAA+E + GGRR+VEVYHPFP+TPEGLIRQLTHAQQAVNKGSL++AL AKDGVVL+G RR+LSPL+VGPTPKIG++ QH+AYVMAGLVPDGRY+VRRGR L+Q+HWF YGEEVGLP LLM+LSKV+TSAHYR P EG G KG +SFFEEIR +PSVDPIGDAEAE++KEGLPAR+FGVGFLFAGP AP ++ + G D YPPW VYEMGPSGLFVRWSARAIGE G++AEALLE+RYRP ++LE C+RLA+ +CD+V+ SS S Sbjct: 49 TNPPCLLLAIVVL----LLNFVCAVHAALESGNNGGRRLVEVYHPFPYTPEGLIRQLTHAQQAVNKGSLAMALVAKDGVVLVGSRRNLSPLLVGPTPKIGQMDQHIAYVMAGLVPDGRYVVRRGRLLSQQHWFVYGEEVGLPGLLMDLSKVLTSAHYRLPPEGPLGEKKG---ASFFEEIRPKPSVDPIGDAEAELKKEGLPARYFGVGFLFAGPLTASRAPTPVDEMNGGDNPASSADVDTTRPTEEASSTYPPWAVYEMGPSGLFVRWSARAIGERGDRAEALLESRYRPGLTLEECQRLAIHICDSVMEDSSSS 358
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_014767927.1 (PREDICTED: proteasome subunit alpha type-5-like [Octopus bimaculoides] >KOF94795.1 hypothetical protein OCBIM_22000646mg [Octopus bimaculoides]) HSP 1 Score: 110.2 bits (274), Expect = 1.500e-20 Identity = 80/296 (27.03%), Postives = 130/296 (43.92%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVVGPT-PKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLK 352 F+PEG + Q+ +A +A+ GS +I + DG+VL E+R PL+V + K+ + H+ M+GLV D R ++ R R AQ HWF Y E++ + ++ +S + + GD +A+ G +R FGV LFAG ++ + P L + M PSG F+++ A+AIG G E A+ L+ Y MSL+ ++ A+++ V+ S N+EMA +TR+ N + F K Sbjct: 15 FSPEGRLFQVEYAIEAIKLGSTAIGIQTNDGIVLAVEKRVTCPLIVASSIEKVLEIDSHIGCAMSGLVADSRTMIDRARVEAQNHWFTYNEKMSVESVTQAVSNLALA----------------------------------FGDDDAD---PGAMSRPFGVALLFAG--IDEKGPQL-------------------------FHMDPSGTFIQYDAKAIGSGSEGAQQALQDVYHKSMSLDNARKEALKILQQVMEEKLDST---------------NVEMATVTREKNFQMFSK 231
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KXJ11829.1 (Proteasome subunit alpha type-5 [Exaiptasia pallida]) HSP 1 Score: 104.4 bits (259), Expect = 8.200e-19 Identity = 76/307 (24.76%), Postives = 130/307 (42.35%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLV-VGPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQLR 363 F+PEG + Q+ +A +A+ GS +I + +GVVL E+R SPL+ KI + +H+ M+GL+ D R ++ + R AQ HWF Y E + L ++ +S + GD +A +EG +R FGV LF G ++ + P+L + + PSG F+ + A+AIG G E A+ LE Y M+L + A+ + V+ ++ N+E+A +T D + R K + +++++ Sbjct: 15 FSPEGRLFQVEYAIEAIKLGSTAIGIRTSEGVVLAVEKRITSPLMEPSSVEKIVEVDRHIGCAMSGLIADSRTMIDKARVEAQNHWFTYNESISLESITQAVSNLALE----------------------------------FGDDDA---REGAMSRPFGVALLFGG--IDDKGPSL-------------------------FHLDPSGTFIEYDAKAIGSGSEGAQHALEEAYHKSMTLSEASKSALTILKQVM---------------EEKLNATNVELATVTADNHFRMHTKEELEALVQEIK 242
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_020904721.1 (proteasome subunit alpha type-5-like [Exaiptasia pallida]) HSP 1 Score: 104.4 bits (259), Expect = 8.200e-19 Identity = 76/307 (24.76%), Postives = 130/307 (42.35%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLV-VGPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQLR 363 F+PEG + Q+ +A +A+ GS +I + +GVVL E+R SPL+ KI + +H+ M+GL+ D R ++ + R AQ HWF Y E + L ++ +S + GD +A +EG +R FGV LF G ++ + P+L + + PSG F+ + A+AIG G E A+ LE Y M+L + A+ + V+ ++ N+E+A +T D + R K + +++++ Sbjct: 85 FSPEGRLFQVEYAIEAIKLGSTAIGIRTSEGVVLAVEKRITSPLMEPSSVEKIVEVDRHIGCAMSGLIADSRTMIDKARVEAQNHWFTYNESISLESITQAVSNLALE----------------------------------FGDDDA---REGAMSRPFGVALLFGG--IDDKGPSL-------------------------FHLDPSGTFIEYDAKAIGSGSEGAQHALEEAYHKSMTLSEASKSALTILKQVM---------------EEKLNATNVELATVTADNHFRMHTKEELEALVQEIK 312
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_022784486.1 (proteasome subunit alpha type-5-like [Stylophora pistillata] >PFX29337.1 Proteasome subunit alpha type-5 [Stylophora pistillata]) HSP 1 Score: 104.4 bits (259), Expect = 8.200e-19 Identity = 85/309 (27.51%), Postives = 133/309 (43.04%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVVGPT--PKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSL-EACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQLR 363 F+PEG + Q+ +A +A+ GS +I + +GVVL E+R SPL + PT KI + H+ M+GL+ D R +V + R AQ HWF Y E++ + ++ +S + GD +A +EG +R FGV LF G V+ + P L Y + PSG F ++ A+AIG G E A+ LE Y M+L EACK A+ + V+ ++ N+E+ T D N R F K + +++++ Sbjct: 15 FSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPL-MEPTSVEKIVEIDSHIGCAMSGLIADSRTMVDKARVEAQNHWFTYNEKMSVESVTQAVSNLALE----------------------------------FGDDDA---REGAMSRPFGVALLFGG--VDAKGPQL-------------------------YHLDPSGTFFQYDAKAIGSGSEGAQQALEEVYHKSMTLREACKS-ALTILKQVM---------------EEKLNATNVELGTSTPDKNFRMFTKEEIETLVQEIK 242
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_001747531.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ87611.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 104.0 bits (258), Expect = 1.100e-18 Identity = 83/312 (26.60%), Postives = 131/312 (41.99%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLV-VGPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQLRGRVSE 368 F+PEG I Q+ +A +A+ GS +I + K+GV++ E+R SPL+ KI + H+A M+GL D R L+ R R AQ +WF Y E + + ++ + + E E + G +R FGV LFAG + EG + R V+Y PSG F+R+ A+AIG G + A++ L+ +Y MS + LA+ V+ + T +N+E+A + D +PF S EE+ + R+ E Sbjct: 15 FSPEGRIFQVEYAIEAIKLGSTAIGIQTKEGVIIAVEKRITSPLMDPSSIEKIVEIDSHIACAMSGLTADARTLIERARVEAQNYWFTYNEPMSVESVTQAVCNLAMQF------------------------------------GEGEDAESGSMSRPFGVALLFAGVDT----------------EGTDKRP-------VLYHADPSGTFIRFDAKAIGSGSQGAQSTLQEKYDATMSFADAETLALSTLKQVM---------------EEVITSKNVEVAAVKAD---KPF-HLYSKEEVEAILQRLEE 248
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_011447862.1 (PREDICTED: proteasome subunit alpha type-5-like [Crassostrea gigas]) HSP 1 Score: 103.2 bits (256), Expect = 1.800e-18 Identity = 81/307 (26.38%), Postives = 132/307 (43.00%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLV-VGPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSL-EACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQL 362 F+PEG + Q+ +A +A+ GS +I + +GVVL E+R SPL+ K+ + H+A M+GL+ D R L+ R R AQ HWF Y ++ + ++ +S + GD +A+ G +R FGV LFAG ++ + P L Y M PSG F+++ A+AIG G E A+ L+ Y M+L EACK A+ + V+ S+ N+EM +T++ F K+ ++ ++ + Sbjct: 15 FSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSPLIEASSIEKVFEVDDHIACAMSGLIADSRTLIDRARVEAQNHWFTYNAKMSVESVTQAVSNLALQ----------------------------------FGDDDAD---PGAMSRPFGVALLFAG--IDNKGPQL-------------------------YHMDPSGTFIQYDAKAIGSGSEGAQQALQDTYHKSMTLKEACKS-ALTILKQVMEEKLNSS---------------NVEMGTVTKEKKYHMFSKQELEDVIKDI 241
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KRZ09209.1 (Proteasome subunit alpha type-5, partial [Trichinella zimbabwensis] >KRZ74198.1 Proteasome subunit alpha type-5, partial [Trichinella papuae]) HSP 1 Score: 103.2 bits (256), Expect = 1.800e-18 Identity = 80/306 (26.14%), Postives = 133/306 (43.46%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQL 362 F+PEG + Q+ +A +A+ GS +I + +DGV+L+ E+R S L++ KI ++ H+ +GL+ D R LV R R A +WF YG+++ + + ++ + GD +AE +R FGV LFAG + R G ++ Y M PSG F++ A+AIG G E A+ L+ +Y +MSL K+LA+ + V+ ++ T N+E+A +T+D + LS +E+ L Sbjct: 17 FSPEGRLFQVEYAIEAIKLGSTAIGILTRDGVLLVCEKRITSTLMIPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAGYD----------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYEANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTKDSG----FEILSKDEVENL 238
BLAST of NO06G02060 vs. NCBI_GenBank
Match: XP_005538150.1 (20S core proteasome subunit alpha 5 [Cyanidioschyzon merolae strain 10D] >BAM82114.1 20S core proteasome subunit alpha 5 [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 102.8 bits (255), Expect = 2.400e-18 Identity = 85/294 (28.91%), Postives = 122/294 (41.50%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVVGPT-PKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPF 350 F+PEG + Q+ +A +A+ GS ++ + DGVVL E+R SPL+ + KI + H+ M+GL D R LV+ R AQ H F Y E M + V + A R G++G + +R FGV L AG + PAL Y PSG + RW A+AIG GGE A+ +LE RYR D+SL + +A+QV V+ ++ +N+EMA + DG F Sbjct: 15 FSPEGRLFQVEYALEAIKLGSTAVGIQCADGVVLAVEKRVTSPLIEPRSIEKIVEIDTHICATMSGLTADARTLVQHARTEAQNHRFNYEEP-------MPVESVAQAVCDLALRFGESG--------YXXXXXXXXXXXXXXXXXXXXXNNAPVMSRPFGVALLLAG--CDERGPAL-------------------------YTTDPSGTYTRWLAKAIGAGGESAQVVLEERYRRDLSLAEAEAIALQVLRQVM---------------EEKLGAKNIEMARVVPDGKSGRF 251
BLAST of NO06G02060 vs. NCBI_GenBank
Match: KRY49967.1 (Proteasome subunit alpha type-5 [Trichinella britovi]) HSP 1 Score: 102.8 bits (255), Expect = 2.400e-18 Identity = 82/305 (26.89%), Postives = 134/305 (43.93%), Query Frame = 0 Query: 57 FTPEGLIRQLTHAQQAVNKGSLSIALAAKDGVVLIGERRDLSPLVV-GPTPKIGRLAQHVAYVMAGLVPDGRYLVRRGRALAQKHWFEYGEEVGLPALLMELSKVVTSAHYRAPREGKTGGNKGEKSSSFFEEIRSRPSVDPIGDAEAEVRKEGLPARHFGVGFLFAGPEVECEAPALLEPLVEGGREGEEMRKDGVYPPWVVYEMGPSGLFVRWSARAIGEGGEQAEALLEARYRPDMSLEACKRLAVQVCDTVLAASSPSAPLPSSFTARQEETIENLEMACLTRDGNGRPFLKRLSDEELRQ 361 F+PEG + Q+ +A +A+ GS +I ++ ++GV+L+ E+R S L+V KI ++ H+ +GL+ D R LV R R A +WF YG+++ + + ++ + GD +AE +R FGV LFAG C+ R G ++ Y M PSG F++ A+AIG G E A+ L+ +Y +MSL K+LA+ + V+ ++ T N+E+A +T+D F DE+L Q Sbjct: 37 FSPEGRLFQVEYAIEAIKLGSTAIGISTREGVLLVCEKRITSTLMVPSSVEKIMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKITVEGVTQAVANLALE----------------------------------FGDDDAEAAM----SRPFGVAVLFAG----CD------------RYGPQL-----------YNMDPSGTFIQCQAKAIGSGCESAQQALQEKYDANMSLLEAKKLAISILKQVM---------------EEKITSTNIEIATVTQDSG---FAILSKDEQLFQ 258 The following BLAST results are available for this feature:
BLAST of NO06G02060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02060 ID=NO06G02060|Name=NO06G02060|organism=Nannochloropsis oceanica|type=gene|length=1536bpback to top protein sequence of NO06G02060.1 >NO06G02060.1-protein ID=NO06G02060.1-protein|Name=NO06G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=384bpback to top Synonyms
Publications
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