NO06G02030, NO06G02030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO06G02030 vs. NCBI_GenBank
Match: EWM26252.1 (hypothetical protein Naga_100025g27 [Nannochloropsis gaditana]) HSP 1 Score: 306.6 bits (784), Expect = 6.400e-80 Identity = 165/216 (76.39%), Postives = 180/216 (83.33%), Query Frame = 0 Query: 12 LFLACCFTTFAFVGHSALPSTRISTVLTAIRATRTRGVMTAGLFDGLFLSDTEKEDAYQKQQEILRARQNPEKQKAYFQEVNKRRATASQNFKEKFNLSKNGQQDPAVKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDEGYVDESASLGNTLKRLFGFGKESKPTTLPQGPGSDGPGAARGKGKSGYGGGKKK 228 L L C T AFV P+ ++S + R RGVMTAGLFDGLFLSD+EKE+AYQKQQEILRARQNP+KQKAYFQEVNKRRA A++N+KEKFNLSKNG+QDPA+KWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVD+GYVDESASLGNT+KRLFGFGK SKPT LPQG SDGP + K G GG KK Sbjct: 10 LLLTCASTALAFV---VRPAYQVS------QLRRIRGVMTAGLFDGLFLSDSEKEEAYQKQQEILRARQNPDKQKAYFQEVNKRRAEANKNYKEKFNLSKNGKQDPAIKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDDGYVDESASLGNTIKRLFGFGKASKPTMLPQGLDSDGPNS-----KKGAKGGNKK 211
BLAST of NO06G02030 vs. NCBI_GenBank
Match: XP_005535702.1 (hypothetical protein CYME_CMF025C [Cyanidioschyzon merolae strain 10D] >BAM79416.1 hypothetical protein CYME_CMF025C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 87.8 bits (216), Expect = 4.700e-14 Identity = 71/190 (37.37%), Postives = 94/190 (49.47%), Query Frame = 0 Query: 42 RATRTRG---VMTAGLFDGL--FLSDTEKEDAYQKQQEILRARQNPEKQKAYFQEVNKRR--------ATASQNFKEKFNLSKNGQ--QDPAVKWMELRKKGVIGEREKYEQYG-ETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDEGYVDESASLGNTLKRLFGFGKESKPTTLPQGP--GSDGPGAA 214 RA RTR + AGLFD D E + A KQ E R R+ E+Q+ +++ RR A Q +E+ N + + +DP + W R+K K YG E RGII+P FG ++D GERFDLRLPYVDEGYVDE A + + FG+ KP + P G +G AA Sbjct: 37 RAPRTRATSRAVIAGLFDAFKPLFGDGENDRAQNKQLESQREREIAEQQRIMREKLEARRAGRHLEGVAERRQAVQEQLNAKEKPKPGEDPLIAWERQREKERTAGTWKEVGYGEEPKRGIILPWPSFGIPRFDYGERFDLRLPYVDEGYVDEDADIMGKV-----FGRRRKPPESQRSPENGDNGTNAA 221
BLAST of NO06G02030 vs. NCBI_GenBank
Match: XP_005647199.1 (hypothetical protein COCSUDRAFT_63797 [Coccomyxa subellipsoidea C-169] >EIE22655.1 hypothetical protein COCSUDRAFT_63797 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 82.4 bits (202), Expect = 2.000e-12 Identity = 56/142 (39.44%), Postives = 75/142 (52.82%), Query Frame = 0 Query: 64 EKEDAYQKQQEILRARQNPEKQKAYFQEVNKRRATASQNFKEKFNLSKNGQQDPAVKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDEGYVDESASLGNTLKRLFGFGKESKPTTLPQGP 206 EKEDAY+ QQ++LR R+ QK +VN RRA +K+N ++ K E ++ + ER N IIIP PFG +YD+GERFDL+ Y D G+VDE A G +KR FG GK+ +GP Sbjct: 18 EKEDAYRAQQDVLRRRREGSWQK----DVNARRAKV-----KKYNTDPEYKK----KIDEDKRARALAERPPDPIVNAFN--IIIPLAPFGIPEYDQGERFDLKAKYCDNGWVDEEAEFGKQVKRFFGMGKKKSDDESEEGP 144
BLAST of NO06G02030 vs. NCBI_GenBank
Match: CEM34457.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 80.5 bits (197), Expect = 7.500e-12 Identity = 50/124 (40.32%), Postives = 73/124 (58.87%), Query Frame = 0 Query: 62 DTEKEDAYQKQQEILRARQNPEKQKAYFQEVNKRRATAS--QNFKEKFNLSKNGQ------QDPAVKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDEGYVD 178 D K + ++KQQEIL+ R+NPEK K Y+ ++ RRA AS + K++ + G+ Q W R++G+IG + Y E R I +P PFG KYD+GERFDLR P+V+ G+V+ Sbjct: 44 DPVKAERFKKQQEILQRRRNPEKLKEYYSDLADRRAKASKLEILKKQAWAERPGETAAQRKQRIEATWESFREQGLIG-KPGTSTYEEPERSIPLPVAPFGLEKYDQGERFDLRSPWVESGWVN 166
BLAST of NO06G02030 vs. NCBI_GenBank
Match: OSX78965.1 (hypothetical protein BU14_0093s0008 [Porphyra umbilicalis]) HSP 1 Score: 74.7 bits (182), Expect = 4.100e-10 Identity = 51/141 (36.17%), Postives = 72/141 (51.06%), Query Frame = 0 Query: 61 SDTEKEDAYQKQQEILRARQNPEKQKAYFQEVNKRRATASQNFKEKFNLSKNGQQDPAVKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDEGYVDESASLGNTLKRLFGFGK---ESKP 199 S+ +++ Q+ +L R++ + Y EV +RRA +F+ L +DP W +G+I + YE E GI +P FG KYD GERFDLRLP+V+ GY D A + + R FGFGK E KP Sbjct: 7 SEEQRQAEVDAQRAMLARRRDEKAAAKYMAEVEQRRADTEAHFQSN-KLDIQPGEDPIEAWRRKEARGLI-KPLGYEDVPE--GGIPMPMASFGIPKYDNGERFDLRLPHVEVGYEDPDADIMGKIGRFFGFGKKPQEKKP 143
BLAST of NO06G02030 vs. NCBI_GenBank
Match: OEU09305.1 (hypothetical protein FRACYDRAFT_195476 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 72.8 bits (177), Expect = 1.600e-9 Identity = 61/169 (36.09%), Postives = 82/169 (48.52%), Query Frame = 0 Query: 43 ATRTRGVM--TAGLFDGLFLSDT----EKEDAYQKQQEILRARQNPEKQK-AYFQEVNKRRATA----SQNFKEKFNLSKNGQQDPAVKWMELRKKGVIGEREKYEQYGETNR--GIIIPQVPFG-------NTKYDEGERFDLRLPYVDEGYVDESASLGNTLKRLFG 192 +TRT+ M G+FD T E D Y KQQ IL R+ P+ Q+ YFQ+V +RR TA S N+ + K G +DP +W + R G IG+ E +QYG+ + GI +P FG LRLPY D+GYVDE + + L FG Sbjct: 3 STRTQHSMELQMGMFDNWRAGGTAGGDELNDEYAKQQRILEERRAPKSQRDKYFQKVEQRRQTADKERSDNWAWQTKTYKKG-EDPIDEWKKRRADGTIGDLE--DQYGDPKKIGGIPLPMASFGVGGXXXXXXXXXXXXXXXLRLPYADQGYVDEDSDVMGKLSGFFG 168
BLAST of NO06G02030 vs. NCBI_GenBank
Match: XP_002951388.1 (hypothetical protein VOLCADRAFT_120951 [Volvox carteri f. nagariensis] >EFJ47564.1 hypothetical protein VOLCADRAFT_120951 [Volvox carteri f. nagariensis]) HSP 1 Score: 72.4 bits (176), Expect = 2.000e-9 Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 0 Query: 62 DTEKEDAYQKQQEILRARQNPEKQKAYFQEVNKRRATASQNF--------KEKFNLSKNGQQDPAVKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDEGYVDES-----ASLGNTLKRLFGFGKESKPTTL 202 D+EKE+ ++ QQE+++ R K +E N+RR ++ +EK L++ D W K+ I E+ N GI++P +PFG KYDEGERFDLR PY D G+VD A L ++ F +S+PT L Sbjct: 41 DSEKEEQWRLQQELIQKR----KTGQLIKEANERRKKVAEELASRKELRRREKDALARGEMPDTLKSWKPYDKE--IDEK--------ANSGIVVPLLPFGIKKYDEGERFDLRSPYSDAGWVDPEEQDAWAGLKKIGTKILNFSGKSEPTEL 179
BLAST of NO06G02030 vs. NCBI_GenBank
Match: KXZ47774.1 (hypothetical protein GPECTOR_33g656 [Gonium pectorale]) HSP 1 Score: 68.6 bits (166), Expect = 2.900e-8 Identity = 49/153 (32.03%), Postives = 75/153 (49.02%), Query Frame = 0 Query: 62 DTEKEDAYQKQQEILRARQNPEKQKAYFQEVNKRRATASQNF--------KEKFNLSKNGQQDPAVKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDEGYVDES-----ASLGNTLKRLFGFGKESKPTTL 202 D EKE+ ++ QQE++ R++ + +E N+RR ++ +EK L++ D W K+ I E+ N GI++P +PFG KYDEGERFDLR PY D G+VD + L ++ F +S+P L Sbjct: 23 DDEKEEQWRVQQELMEKRRSGQ----LIKEANERRKKVAETVESRKELRRREKEALARGEMPDTLQNWKPYDKE--IDEK--------ANSGIVVPLLPFGIKKYDEGERFDLRSPYSDAGWVDPDEQDAWSGLKKIGTKILNFSGKSEPAEL 161
BLAST of NO06G02030 vs. NCBI_GenBank
Match: GAX84385.1 (hypothetical protein CEUSTIGMA_g11807.t1 [Chlamydomonas eustigma]) HSP 1 Score: 67.0 bits (162), Expect = 8.600e-8 Identity = 59/178 (33.15%), Postives = 84/178 (47.19%), Query Frame = 0 Query: 21 FAFVGHSALPSTRISTVLTAIRATRTRGVMTAGLFDGLFLSDTEKEDAYQKQQEILRARQ--------NPEKQKAYFQEVNKRRATASQNFKEKFNLSKNGQQDPAVKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDEGYVD-ESASLGNTLKRL 190 F HS++ ST L+ RT + G T+K+D ++ QQE+L AR+ N ++K QE R A Q +EK +L+K D W + K + GI+IP +PFG +YDEGERFDLR PY DEG+VD E + + LK++ Sbjct: 3 FQIKSHSSINST---DRLSRHPRVRTNALFGWGKDKESTQKSTDKDDQFRIQQELLAARRTGSLIKEANDRRRKV--QETVAERKAARQ--QEKDSLAKGIIPDSLKDW----------KNYKTRDAEQGTSGIVIPLLPFGKKEYDEGERFDLRSPYADEGWVDPEETDMWSGLKKI 163
BLAST of NO06G02030 vs. NCBI_GenBank
Match: XP_001696005.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 65.5 bits (158), Expect = 2.500e-7 Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = 0 Query: 68 AYQKQQEILRARQNPEKQKAYFQEVNKRRATASQNFKEKFNLSKNGQQDPAVKWMELRKKGVIGEREKYEQYGETNRGIIIPQVPFGNTKYDEGERFDLRLPYVDEGYVD-ESASLGNTLK----RLFGFGKESKPTTL 202 A Q+ +E+++ R K +E N RR ++ +E+ NL ++ A M +G ++ +Q G + GI++P +PFG KYDEGERFDLR PY D G+VD E + LK ++ F +S+PT L Sbjct: 19 AAQRTRELIQKR----KSGVLIKEANDRRRKVAETLQERKNLRAAEKEALARGEMPETLQGWKPYEKEIDQKG-ISGGIVVPLLPFGIKKYDEGERFDLRSPYSDAGWVDPEEQDAWSGLKKIGTKILNFSGKSEPTEL 152 The following BLAST results are available for this feature:
BLAST of NO06G02030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02030 ID=NO06G02030|Name=NO06G02030|organism=Nannochloropsis oceanica|type=gene|length=1076bpback to top protein sequence of NO06G02030.1 >NO06G02030.1-protein ID=NO06G02030.1-protein|Name=NO06G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=228bpback to top Synonyms
Publications
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