NO06G02020, NO06G02020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02020 vs. NCBI_GenBank
Match: EWM26218.1 (Acyl-CoA N-acyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 221.1 bits (562), Expect = 2.200e-54 Identity = 99/117 (84.62%), Postives = 111/117 (94.87%), Query Frame = 0 Query: 1 MEVRRRYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVTNDISCVPDLLVWGGIGTRMDMPVEDYLRRWRSVIVTRGEEFMAAR 118 M+VRRRYWKQL+GS +FPYGCGLLLGAAAMR+AY+KGC KAELLAINDDEKSH+LLLGFYRTAGFV VKEVTND+ CVPDLLVWGG+GTRMDMPVE+YLRRWR+VIV+RGEEF+ R Sbjct: 122 MQVRRRYWKQLDGSNRFPYGCGLLLGAAAMRYAYDKGCSKAELLAINDDEKSHRLLLGFYRTAGFVSVKEVTNDLRCVPDLLVWGGVGTRMDMPVEEYLRRWRTVIVSRGEEFLNRR 238
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_005830543.1 (hypothetical protein GUITHDRAFT_110369 [Guillardia theta CCMP2712] >EKX43563.1 hypothetical protein GUITHDRAFT_110369 [Guillardia theta CCMP2712]) HSP 1 Score: 109.4 bits (272), Expect = 9.200e-21 Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 0 Query: 19 YGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVTNDISCVPDLLVWGGIGTRMDMPVEDYLRRWRSVIVTRGE 112 YG LLLGA A R+AYE+GC++AELLAI D+E+ H++L YR GF VK+VT+DI+CV D ++WGGIGT M+ VE+ LR+ I GE Sbjct: 155 YGLSLLLGAYAGRYAYEQGCRRAELLAIKDNERQHKILERHYRRLGFRAVKDVTDDITCVGDRMIWGGIGTLMEASVEEMLRKHADEIRRMGE 247
BLAST of NO06G02020 vs. NCBI_GenBank
Match: GAQ83448.1 (hypothetical protein KFL_001480170 [Klebsormidium nitens]) HSP 1 Score: 106.3 bits (264), Expect = 7.800e-20 Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = 0 Query: 23 LLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVTNDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103 L+LG A +RH Y++GCKKAELLAIND + H+ L+ +YR GF V EVT +S +P +LVWGG+GTRMD +E LR+W Sbjct: 124 LILGGAMLRHGYDRGCKKAELLAINDTDVFHRKLVNYYRRIGFTKVHEVTGGLSDIPHMLVWGGLGTRMDADIETILRKW 203
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_022896163.1 (uncharacterized protein LOC111410167 [Olea europaea var. sylvestris]) HSP 1 Score: 100.9 bits (250), Expect = 3.300e-18 Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 0 Query: 6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103 R ++ G +K +G GL +GA A+RH Y+ GCKK ELLAIND + H L+ FY+ GF VV EVT + + + +LVWGG+GTRMD VED + +W Sbjct: 130 RLQRETLGMEKSIFGIGLFIGAVAIRHGYDSGCKKTELLAINDTDLYHLKLVRFYKRIGFSVVHEVTGSSLGDLWHMLVWGGVGTRMDANVEDLMIKW 227
BLAST of NO06G02020 vs. NCBI_GenBank
Match: PNT20393.1 (hypothetical protein POPTR_009G088200v3 [Populus trichocarpa]) HSP 1 Score: 100.1 bits (248), Expect = 5.600e-18 Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0 Query: 6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103 R ++ G +K +G GL +GA A+R+ Y+ GCK AELLAIND + H L+ FY GF V EVT + I +P +LVWGGIGTRMD VE+ L +W Sbjct: 166 RLRRETLGMEKSIFGIGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFKAVYEVTGSTIGDLPHMLVWGGIGTRMDADVEELLIKW 263
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_011001969.1 (PREDICTED: uncharacterized protein LOC105109073 [Populus euphratica] >XP_011001976.1 PREDICTED: uncharacterized protein LOC105109073 [Populus euphratica]) HSP 1 Score: 100.1 bits (248), Expect = 5.600e-18 Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0 Query: 6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103 R ++ G +K +G GL +GA A+R+ Y+ GCK AELLAIND + H L+ FY GF V EVT + I +P +LVWGGIGTRMD +E+ L +W Sbjct: 128 RLRRETLGMEKSIFGIGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFKAVYEVTGSTIGDLPHMLVWGGIGTRMDADIEELLLKW 225
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_002313913.2 (uncharacterized protein LOC7478739 [Populus trichocarpa]) HSP 1 Score: 100.1 bits (248), Expect = 5.600e-18 Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0 Query: 6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103 R ++ G +K +G GL +GA A+R+ Y+ GCK AELLAIND + H L+ FY GF V EVT + I +P +LVWGGIGTRMD VE+ L +W Sbjct: 128 RLRRETLGMEKSIFGIGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFKAVYEVTGSTIGDLPHMLVWGGIGTRMDADVEELLIKW 225
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_011013784.1 (PREDICTED: uncharacterized protein LOC105117727 [Populus euphratica]) HSP 1 Score: 99.8 bits (247), Expect = 7.300e-18 Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0 Query: 6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103 R ++ G +K +G GL +GA A+R+ Y+ GCK AELLAIND + H L+ FY GF V EVT + I +P +LVWGGIGTRMD +E+ L +W Sbjct: 128 RLRRETLGMEKSIFGIGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFEAVYEVTGSTIGDLPHMLVWGGIGTRMDADIEELLIKW 225
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_022763514.1 (DNA polymerase kappa isoform X3 [Durio zibethinus]) HSP 1 Score: 99.8 bits (247), Expect = 7.300e-18 Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 0 Query: 6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRWRS 105 R ++ G ++ +G GL +GA A+R+ Y+ GCK AELLAIND + H L+ FY+ GF V EVT + I +P +L+WGGIGTRMD VE+ L +W S Sbjct: 641 RLKRETLGMERSIFGIGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYKRIGFKAVHEVTGSTIGDMPHMLIWGGIGTRMDASVEELLVKWCS 740
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_022763513.1 (DNA polymerase kappa isoform X2 [Durio zibethinus]) HSP 1 Score: 99.8 bits (247), Expect = 7.300e-18 Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 0 Query: 6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRWRS 105 R ++ G ++ +G GL +GA A+R+ Y+ GCK AELLAIND + H L+ FY+ GF V EVT + I +P +L+WGGIGTRMD VE+ L +W S Sbjct: 740 RLKRETLGMERSIFGIGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYKRIGFKAVHEVTGSTIGDMPHMLIWGGIGTRMDASVEELLVKWCS 839 The following BLAST results are available for this feature:
BLAST of NO06G02020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02020 ID=NO06G02020|Name=NO06G02020|organism=Nannochloropsis oceanica|type=gene|length=544bpback to top protein sequence of NO06G02020.1 >NO06G02020.1-protein ID=NO06G02020.1-protein|Name=NO06G02020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=140bpback to top Synonyms
Publications
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