NO06G02020, NO06G02020 (gene) Nannochloropsis oceanica

Overview
NameNO06G02020
Unique NameNO06G02020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length544
Alignment locationchr6:597745..598288 +

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Properties
Property NameValue
DescriptionAcyl-CoA N-acyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:597745..598288 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016181Acyl_CoA_acyltransferase
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO06G02020 vs. NCBI_GenBank
Match: EWM26218.1 (Acyl-CoA N-acyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 221.1 bits (562), Expect = 2.200e-54
Identity = 99/117 (84.62%), Postives = 111/117 (94.87%), Query Frame = 0
Query:    1 MEVRRRYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVTNDISCVPDLLVWGGIGTRMDMPVEDYLRRWRSVIVTRGEEFMAAR 118
            M+VRRRYWKQL+GS +FPYGCGLLLGAAAMR+AY+KGC KAELLAINDDEKSH+LLLGFYRTAGFV VKEVTND+ CVPDLLVWGG+GTRMDMPVE+YLRRWR+VIV+RGEEF+  R
Sbjct:  122 MQVRRRYWKQLDGSNRFPYGCGLLLGAAAMRYAYDKGCSKAELLAINDDEKSHRLLLGFYRTAGFVSVKEVTNDLRCVPDLLVWGGVGTRMDMPVEEYLRRWRTVIVSRGEEFLNRR 238          
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_005830543.1 (hypothetical protein GUITHDRAFT_110369 [Guillardia theta CCMP2712] >EKX43563.1 hypothetical protein GUITHDRAFT_110369 [Guillardia theta CCMP2712])

HSP 1 Score: 109.4 bits (272), Expect = 9.200e-21
Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 0
Query:   19 YGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVTNDISCVPDLLVWGGIGTRMDMPVEDYLRRWRSVIVTRGE 112
            YG  LLLGA A R+AYE+GC++AELLAI D+E+ H++L   YR  GF  VK+VT+DI+CV D ++WGGIGT M+  VE+ LR+    I   GE
Sbjct:  155 YGLSLLLGAYAGRYAYEQGCRRAELLAIKDNERQHKILERHYRRLGFRAVKDVTDDITCVGDRMIWGGIGTLMEASVEEMLRKHADEIRRMGE 247          
BLAST of NO06G02020 vs. NCBI_GenBank
Match: GAQ83448.1 (hypothetical protein KFL_001480170 [Klebsormidium nitens])

HSP 1 Score: 106.3 bits (264), Expect = 7.800e-20
Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = 0
Query:   23 LLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVTNDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103
            L+LG A +RH Y++GCKKAELLAIND +  H+ L+ +YR  GF  V EVT  +S +P +LVWGG+GTRMD  +E  LR+W
Sbjct:  124 LILGGAMLRHGYDRGCKKAELLAINDTDVFHRKLVNYYRRIGFTKVHEVTGGLSDIPHMLVWGGLGTRMDADIETILRKW 203          
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_022896163.1 (uncharacterized protein LOC111410167 [Olea europaea var. sylvestris])

HSP 1 Score: 100.9 bits (250), Expect = 3.300e-18
Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 0
Query:    6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103
            R  ++  G +K  +G GL +GA A+RH Y+ GCKK ELLAIND +  H  L+ FY+  GF VV EVT + +  +  +LVWGG+GTRMD  VED + +W
Sbjct:  130 RLQRETLGMEKSIFGIGLFIGAVAIRHGYDSGCKKTELLAINDTDLYHLKLVRFYKRIGFSVVHEVTGSSLGDLWHMLVWGGVGTRMDANVEDLMIKW 227          
BLAST of NO06G02020 vs. NCBI_GenBank
Match: PNT20393.1 (hypothetical protein POPTR_009G088200v3 [Populus trichocarpa])

HSP 1 Score: 100.1 bits (248), Expect = 5.600e-18
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103
            R  ++  G +K  +G GL +GA A+R+ Y+ GCK AELLAIND +  H  L+ FY   GF  V EVT + I  +P +LVWGGIGTRMD  VE+ L +W
Sbjct:  166 RLRRETLGMEKSIFGIGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFKAVYEVTGSTIGDLPHMLVWGGIGTRMDADVEELLIKW 263          
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_011001969.1 (PREDICTED: uncharacterized protein LOC105109073 [Populus euphratica] >XP_011001976.1 PREDICTED: uncharacterized protein LOC105109073 [Populus euphratica])

HSP 1 Score: 100.1 bits (248), Expect = 5.600e-18
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103
            R  ++  G +K  +G GL +GA A+R+ Y+ GCK AELLAIND +  H  L+ FY   GF  V EVT + I  +P +LVWGGIGTRMD  +E+ L +W
Sbjct:  128 RLRRETLGMEKSIFGIGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFKAVYEVTGSTIGDLPHMLVWGGIGTRMDADIEELLLKW 225          
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_002313913.2 (uncharacterized protein LOC7478739 [Populus trichocarpa])

HSP 1 Score: 100.1 bits (248), Expect = 5.600e-18
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103
            R  ++  G +K  +G GL +GA A+R+ Y+ GCK AELLAIND +  H  L+ FY   GF  V EVT + I  +P +LVWGGIGTRMD  VE+ L +W
Sbjct:  128 RLRRETLGMEKSIFGIGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFKAVYEVTGSTIGDLPHMLVWGGIGTRMDADVEELLIKW 225          
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_011013784.1 (PREDICTED: uncharacterized protein LOC105117727 [Populus euphratica])

HSP 1 Score: 99.8 bits (247), Expect = 7.300e-18
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRW 103
            R  ++  G +K  +G GL +GA A+R+ Y+ GCK AELLAIND +  H  L+ FY   GF  V EVT + I  +P +LVWGGIGTRMD  +E+ L +W
Sbjct:  128 RLRRETLGMEKSIFGIGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFEAVYEVTGSTIGDLPHMLVWGGIGTRMDADIEELLIKW 225          
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_022763514.1 (DNA polymerase kappa isoform X3 [Durio zibethinus])

HSP 1 Score: 99.8 bits (247), Expect = 7.300e-18
Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRWRS 105
            R  ++  G ++  +G GL +GA A+R+ Y+ GCK AELLAIND +  H  L+ FY+  GF  V EVT + I  +P +L+WGGIGTRMD  VE+ L +W S
Sbjct:  641 RLKRETLGMERSIFGIGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYKRIGFKAVHEVTGSTIGDMPHMLIWGGIGTRMDASVEELLVKWCS 740          
BLAST of NO06G02020 vs. NCBI_GenBank
Match: XP_022763513.1 (DNA polymerase kappa isoform X2 [Durio zibethinus])

HSP 1 Score: 99.8 bits (247), Expect = 7.300e-18
Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    6 RYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDEKSHQLLLGFYRTAGFVVVKEVT-NDISCVPDLLVWGGIGTRMDMPVEDYLRRWRS 105
            R  ++  G ++  +G GL +GA A+R+ Y+ GCK AELLAIND +  H  L+ FY+  GF  V EVT + I  +P +L+WGGIGTRMD  VE+ L +W S
Sbjct:  740 RLKRETLGMERSIFGIGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYKRIGFKAVHEVTGSTIGDMPHMLIWGGIGTRMDASVEELLVKWCS 839          
The following BLAST results are available for this feature:
BLAST of NO06G02020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26218.12.200e-5484.62Acyl-CoA N-acyltransferase [Nannochloropsis gadita... [more]
XP_005830543.19.200e-2154.84hypothetical protein GUITHDRAFT_110369 [Guillardia... [more]
GAQ83448.17.800e-2056.25hypothetical protein KFL_001480170 [Klebsormidium ... [more]
XP_022896163.13.300e-1848.98uncharacterized protein LOC111410167 [Olea europae... [more]
PNT20393.15.600e-1850.00hypothetical protein POPTR_009G088200v3 [Populus t... [more]
XP_011001969.15.600e-1848.98PREDICTED: uncharacterized protein LOC105109073 [P... [more]
XP_002313913.25.600e-1850.00uncharacterized protein LOC7478739 [Populus tricho... [more]
XP_011013784.17.300e-1848.98PREDICTED: uncharacterized protein LOC105117727 [P... [more]
XP_022763514.17.300e-1848.00DNA polymerase kappa isoform X3 [Durio zibethinus][more]
XP_022763513.17.300e-1848.00DNA polymerase kappa isoform X2 [Durio zibethinus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000259NSK000259Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02020.1NO06G02020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597213gene_6512Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100025g26gene4305Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02020.1NO06G02020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02020 ID=NO06G02020|Name=NO06G02020|organism=Nannochloropsis oceanica|type=gene|length=544bp
ATGGAGgtaacgagggagagaggttagcgaagggttgagaaatgcgagag
tcgtgtatccattctgggggtatgccagaagagtatgcttcttcgactta
tttactacctcattccatccccaccattagGTTCGCCGCCGGTACTGGAA
ACAACTCGAAGGCAGCAAAAAATTTCCCTATGGATGCGGGCTCCTCCTAG
GTGCGGCCGCCATGCGTCACGCCTATGAGAAAGGCTGCAAGAAAGCAGAG
CTTTTGGCCATCAATGACGACGAGAAAAGCCATCAGTTATTGTTAGGGTT
TTATCGGACTGCTGGGTTTGTGGTCGTGAAGGAGGTGACGAACGATATCA
GTTGTGTGCCCGATTTGTTGGTTTGGGGTGGAATAGGCACACGGATGGAT
ATGCCCGTTGAAGATTACTTGAGAAGATGGCGGAGCGTGATTGTGACAAG
AGGGGAGGAGTTTATGGCTGCGAGGAGTTGTAGTACTAGCAGCAGCAGCA
GCAGCAGTGGTAATAGGGAGAAGGAAAAGCGAGAGGCAACGTGA
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protein sequence of NO06G02020.1

>NO06G02020.1-protein ID=NO06G02020.1-protein|Name=NO06G02020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=140bp
MEVRRRYWKQLEGSKKFPYGCGLLLGAAAMRHAYEKGCKKAELLAINDDE
KSHQLLLGFYRTAGFVVVKEVTNDISCVPDLLVWGGIGTRMDMPVEDYLR
RWRSVIVTRGEEFMAARSCSTSSSSSSSGNREKEKREAT*
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Synonyms
Publications