NO06G02010, NO06G02010 (gene) Nannochloropsis oceanica

Overview
NameNO06G02010
Unique NameNO06G02010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2673
Alignment locationchr6:593951..596623 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein phosphatase 2C family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:593951..596623 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO:0006470protein dephosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036457PPM-type_dom_sf
IPR015655PP2C
IPR001932PPM-type_phosphatase_dom
Homology
[Close]
BLAST of NO06G02010 vs. NCBI_GenBank
Match: GAY00302.1 (Hypothetical protein PINS_008170 [Pythium insidiosum])

HSP 1 Score: 174.9 bits (442), Expect = 1.100e-39
Identity = 117/305 (38.36%), Postives = 166/305 (54.43%), Query Frame = 0 
Query:  586 PVSFYGVFDGHCGPVAAELAAAHLHRMVGARKKKFVGGWEERK---KLTEEECVARAKRALEDSFADMEALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEGRVEATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSRSFGDPTFKRYYSADAPSLMLRRHVSGTGMQEEEVNAGPPLPLPPEGFEPLVSPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVVAEVFEQHNTLGNAEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGF 888
            P S   V+DGH GP+AAE A+     ++      F+     R    +L ++E + + +  L D+FA ++  +L+  M E +R DGST +  ++   +LFVANLGD R V    T +G VE  R+SVDHKPD++EE KR+ +AGG+V FSGCWRVAH  IP+RLAVSRS GD   K                                 LP     PLVS VP++    ++  D  LV A+DG+WD +SD +AI +V E FE++   G  E   T   ++ AA  ++  AL+K + DN T +V+GF
Sbjct:  305 PASLLAVYDGHNGPLAAEYASHRFRELLS--DNAFLRELCRRPPYYRLRDDE-IEKVQAVLRDAFAAVDDEVLELTMSENKR-DGSTVLLGLMIAGKLFVANLGDSRGVWG--TVDGEVE--RISVDHKPDLDEETKRIEEAGGKVIFSGCWRVAHDEIPLRLAVSRSLGDHPLK-------------------------------ANLPVTCSAPLVSVVPDIQVLDISGVDDVLVFATDGLWDRLSDEDAIEIVRERFEEYQRSGVVEP--TVSKMQFAANALVETALAKRSMDNITAMVIGF 568
[Close]
BLAST of NO06G02010 vs. NCBI_GenBank
Match: ETI31855.1 (hypothetical protein F443_21258 [Phytophthora parasitica P1569] >ETK72196.1 hypothetical protein L915_20674 [Phytophthora parasitica] >ETL25649.1 hypothetical protein L916_20536 [Phytophthora parasitica] >ETL78862.1 hypothetical protein L917_20410 [Phytophthora parasitica] >ETM32142.1 hypothetical protein L914_20415 [Phytophthora parasitica] >ETO60571.1 hypothetical protein F444_21275 [Phytophthora parasitica P1976] >ETP01645.1 hypothetical protein F441_21143 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 164.9 bits (416), Expect = 1.200e-36
Identity = 115/310 (37.10%), Postives = 162/310 (52.26%), Query Frame = 0 
Query:  588 SFYGVFDGHCGPVAAELAAAHLHRMVGARKKKF-VGGWEERKKLTEEECVARAKRALEDSFADMEALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEGRV-------EATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSRSFGDPTFKRYYSADAPSLMLRRHVSGTGMQEEEVNAGPPLPLPPEGFEPLVSPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVV-AEVFEQH-NTLGNAEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGF 888
            S   V+DGH G  A+E A      ++G  +    +    +  +LTE++ V + +  L D+FA ++A IL+  +   +R DGST +  ++ G +LFVANLGD RAVLA                A RLSVDHKPD++EE +RV +AGG+V FSGCWRVAH  IP+RLA+SRS GD   K                                 LP     PLVS VP+V    +     +LV ASDG+WD +SD +A  +V A+V E H +    +    T+ A++ AA  ++  AL K + DN T +V+ F
Sbjct:  222 SLLAVYDGHNGAYASEYARRRFRDLLGESEDLMEISRHSQHSELTEDD-VEKVRELLVDAFATIDAEILQRTVILNKR-DGSTVLLGLLVGGKLFVANLGDSRAVLAQAXXXXXXXXXXXXPSAVRLSVDHKPDLKEETERVEEAGGKVIFSGCWRVAHDQIPLRLAISRSLGDHPLK-------------------------------TNLPASCSAPLVSVVPDVRVLNVEAAGEYLVFASDGLWDRLSDDDAAKIVRAKVAEFHWSEEPTSSEDVTKEALQFAANALVEAALLKRSMDNITAMVISF 498
[Close]
BLAST of NO06G02010 vs. NCBI_GenBank
Match: ETI31856.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETK72197.1 hypothetical protein, variant [Phytophthora parasitica] >ETL25650.1 hypothetical protein, variant [Phytophthora parasitica] >ETL78863.1 hypothetical protein, variant [Phytophthora parasitica] >ETM32143.1 hypothetical protein, variant [Phytophthora parasitica] >ETO60572.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP01646.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1])

HSP 1 Score: 164.9 bits (416), Expect = 1.200e-36
Identity = 115/310 (37.10%), Postives = 162/310 (52.26%), Query Frame = 0 
Query:  588 SFYGVFDGHCGPVAAELAAAHLHRMVGARKKKF-VGGWEERKKLTEEECVARAKRALEDSFADMEALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEGRV-------EATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSRSFGDPTFKRYYSADAPSLMLRRHVSGTGMQEEEVNAGPPLPLPPEGFEPLVSPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVV-AEVFEQH-NTLGNAEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGF 888
            S   V+DGH G  A+E A      ++G  +    +    +  +LTE++ V + +  L D+FA ++A IL+  +   +R DGST +  ++ G +LFVANLGD RAVLA                A RLSVDHKPD++EE +RV +AGG+V FSGCWRVAH  IP+RLA+SRS GD   K                                 LP     PLVS VP+V    +     +LV ASDG+WD +SD +A  +V A+V E H +    +    T+ A++ AA  ++  AL K + DN T +V+ F
Sbjct:  221 SLLAVYDGHNGAYASEYARRRFRDLLGESEDLMEISRHSQHSELTEDD-VEKVRELLVDAFATIDAEILQRTVILNKR-DGSTVLLGLLVGGKLFVANLGDSRAVLAQAXXXXXXXXXXXXPSAVRLSVDHKPDLKEETERVEEAGGKVIFSGCWRVAHDQIPLRLAISRSLGDHPLK-------------------------------TNLPASCSAPLVSVVPDVRVLNVEAAGEYLVFASDGLWDRLSDDDAAKIVRAKVAEFHWSEEPTSSEDVTKEALQFAANALVEAALLKRSMDNITAMVISF 497
[Close]
BLAST of NO06G02010 vs. NCBI_GenBank
Match: XP_008914924.1 (hypothetical protein PPTG_18640 [Phytophthora parasitica INRA-310] >ETM99832.1 hypothetical protein PPTG_18640 [Phytophthora parasitica INRA-310] >KUF78608.1 phosphatase 1L protein [Phytophthora nicotianae])

HSP 1 Score: 164.5 bits (415), Expect = 1.500e-36
Identity = 115/310 (37.10%), Postives = 162/310 (52.26%), Query Frame = 0 
Query:  588 SFYGVFDGHCGPVAAELAAAHLHRMVGARKKKF-VGGWEERKKLTEEECVARAKRALEDSFADMEALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEGRV-------EATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSRSFGDPTFKRYYSADAPSLMLRRHVSGTGMQEEEVNAGPPLPLPPEGFEPLVSPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVV-AEVFEQH-NTLGNAEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGF 888
            S   V+DGH G  A+E A      ++G  +    +    +  +LTE++ V + +  L D+FA ++A IL+  +   +R DGST +  ++ G +LFVANLGD RAVLA                A RLSVDHKPD++EE +RV +AGG+V FSGCWRVAH  IP+RLA+SRS GD   K                                 LP     PLVS VP+V    +     +LV ASDG+WD +SD +A  +V A+V E H +    +    T+ A++ AA  ++  AL K + DN T +V+ F
Sbjct:  220 SLLAVYDGHNGAYASEYARRRFRDLLGESEDLMEISRRSQHSELTEDD-VEKVRELLVDAFATIDAEILQRTVILNKR-DGSTVLLGLLVGGKLFVANLGDSRAVLAQAXXXXXXXXXXXXPSAVRLSVDHKPDLKEETERVEEAGGKVIFSGCWRVAHDQIPLRLAISRSLGDHPLK-------------------------------TNLPASCSAPLVSVVPDVRVLNVEAAGEYLVFASDGLWDRLSDDDAAKIVRAKVAEFHWSEEPTSSEDVTKEALQFAANALVEAALLKRSMDNITAMVISF 496
[Close]
BLAST of NO06G02010 vs. NCBI_GenBank
Match: XP_008914923.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETM99833.1 hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 164.5 bits (415), Expect = 1.500e-36
Identity = 115/310 (37.10%), Postives = 162/310 (52.26%), Query Frame = 0 
Query:  588 SFYGVFDGHCGPVAAELAAAHLHRMVGARKKKF-VGGWEERKKLTEEECVARAKRALEDSFADMEALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEGRV-------EATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSRSFGDPTFKRYYSADAPSLMLRRHVSGTGMQEEEVNAGPPLPLPPEGFEPLVSPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVV-AEVFEQH-NTLGNAEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGF 888
            S   V+DGH G  A+E A      ++G  +    +    +  +LTE++ V + +  L D+FA ++A IL+  +   +R DGST +  ++ G +LFVANLGD RAVLA                A RLSVDHKPD++EE +RV +AGG+V FSGCWRVAH  IP+RLA+SRS GD   K                                 LP     PLVS VP+V    +     +LV ASDG+WD +SD +A  +V A+V E H +    +    T+ A++ AA  ++  AL K + DN T +V+ F
Sbjct:  219 SLLAVYDGHNGAYASEYARRRFRDLLGESEDLMEISRRSQHSELTEDD-VEKVRELLVDAFATIDAEILQRTVILNKR-DGSTVLLGLLVGGKLFVANLGDSRAVLAQAXXXXXXXXXXXXPSAVRLSVDHKPDLKEETERVEEAGGKVIFSGCWRVAHDQIPLRLAISRSLGDHPLK-------------------------------TNLPASCSAPLVSVVPDVRVLNVEAAGEYLVFASDGLWDRLSDDDAAKIVRAKVAEFHWSEEPTSSEDVTKEALQFAANALVEAALLKRSMDNITAMVISF 495
[Close]
BLAST of NO06G02010 vs. NCBI_GenBank
Match: ETP29826.1 (hypothetical protein F442_21089 [Phytophthora parasitica P10297])

HSP 1 Score: 164.5 bits (415), Expect = 1.500e-36
Identity = 115/310 (37.10%), Postives = 162/310 (52.26%), Query Frame = 0 
Query:  588 SFYGVFDGHCGPVAAELAAAHLHRMVGARKKKF-VGGWEERKKLTEEECVARAKRALEDSFADMEALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEGRV-------EATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSRSFGDPTFKRYYSADAPSLMLRRHVSGTGMQEEEVNAGPPLPLPPEGFEPLVSPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVV-AEVFEQH-NTLGNAEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGF 888
            S   V+DGH G  A+E A      ++G  +    +    +  +LTE++ V + +  L D+FA ++A IL+  +   +R DGST +  ++ G +LFVANLGD RAVLA                A RLSVDHKPD++EE +RV +AGG+V FSGCWRVAH  IP+RLA+SRS GD   K                                 LP     PLVS VP+V    +     +LV ASDG+WD +SD +A  +V A+V E H +    +    T+ A++ AA  ++  AL K + DN T +V+ F
Sbjct:  222 SLLAVYDGHNGAYASEYARRRFRDLLGESEDLMEISRRSQHSELTEDD-VEKVRELLVDAFATIDAEILQRTVILNKR-DGSTVLLGLLVGGKLFVANLGDSRAVLAQAXXXXXXXXXXXXPSAVRLSVDHKPDLKEETERVEEAGGKVIFSGCWRVAHDQIPLRLAISRSLGDHPLK-------------------------------TNLPASCSAPLVSVVPDVRVLNVEAAGEYLVFASDGLWDRLSDDDAAKIVRAKVAEFHWSEEPTSSEDVTKEALQFAANALVEAALLKRSMDNITAMVISF 498
[Close]
BLAST of NO06G02010 vs. NCBI_GenBank
Match: ETP29827.1 (hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 164.5 bits (415), Expect = 1.500e-36
Identity = 115/310 (37.10%), Postives = 162/310 (52.26%), Query Frame = 0 
Query:  588 SFYGVFDGHCGPVAAELAAAHLHRMVGARKKKF-VGGWEERKKLTEEECVARAKRALEDSFADMEALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEGRV-------EATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSRSFGDPTFKRYYSADAPSLMLRRHVSGTGMQEEEVNAGPPLPLPPEGFEPLVSPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVV-AEVFEQH-NTLGNAEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGF 888
            S   V+DGH G  A+E A      ++G  +    +    +  +LTE++ V + +  L D+FA ++A IL+  +   +R DGST +  ++ G +LFVANLGD RAVLA                A RLSVDHKPD++EE +RV +AGG+V FSGCWRVAH  IP+RLA+SRS GD   K                                 LP     PLVS VP+V    +     +LV ASDG+WD +SD +A  +V A+V E H +    +    T+ A++ AA  ++  AL K + DN T +V+ F
Sbjct:  221 SLLAVYDGHNGAYASEYARRRFRDLLGESEDLMEISRRSQHSELTEDD-VEKVRELLVDAFATIDAEILQRTVILNKR-DGSTVLLGLLVGGKLFVANLGDSRAVLAQAXXXXXXXXXXXXPSAVRLSVDHKPDLKEETERVEEAGGKVIFSGCWRVAHDQIPLRLAISRSLGDHPLK-------------------------------TNLPASCSAPLVSVVPDVRVLNVEAAGEYLVFASDGLWDRLSDDDAAKIVRAKVAEFHWSEEPTSSEDVTKEALQFAANALVEAALLKRSMDNITAMVISF 497
[Close]
BLAST of NO06G02010 vs. NCBI_GenBank
Match: KUF94710.1 (TIMELESS-interacting protein [Phytophthora nicotianae])

HSP 1 Score: 164.5 bits (415), Expect = 1.500e-36
Identity = 115/310 (37.10%), Postives = 162/310 (52.26%), Query Frame = 0 
Query:  588 SFYGVFDGHCGPVAAELAAAHLHRMVGARKKKF-VGGWEERKKLTEEECVARAKRALEDSFADMEALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEGRV-------EATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSRSFGDPTFKRYYSADAPSLMLRRHVSGTGMQEEEVNAGPPLPLPPEGFEPLVSPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVV-AEVFEQH-NTLGNAEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGF 888
            S   V+DGH G  A+E A      ++G  +    +    +  +LTE++ V + +  L D+FA ++A IL+  +   +R DGST +  ++ G +LFVANLGD RAVLA                A RLSVDHKPD++EE +RV +AGG+V FSGCWRVAH  IP+RLA+SRS GD   K                                 LP     PLVS VP+V    +     +LV ASDG+WD +SD +A  +V A+V E H +    +    T+ A++ AA  ++  AL K + DN T +V+ F
Sbjct:  216 SLLAVYDGHNGAYASEYARRRFRDLLGESEDLMEISRRSQHSELTEDD-VEKVRELLVDAFATIDAEILQRTVILNKR-DGSTVLLGLLVGGKLFVANLGDSRAVLAQAXXXXXXXXXXXXPSAVRLSVDHKPDLKEETERVEEAGGKVIFSGCWRVAHDQIPLRLAISRSLGDHPLK-------------------------------TNLPASCSAPLVSVVPDVRVLNVEAAGEYLVFASDGLWDRLSDDDAAKIVRAKVAEFHWSEEPTSSEDVTKEALQFAANALVEAALLKRSMDNITAMVISF 492
[Close]
BLAST of NO06G02010 vs. NCBI_GenBank
Match: POM78061.1 (Protein phosphatase 2C [Phytophthora palmivora var. palmivora])

HSP 1 Score: 164.1 bits (414), Expect = 2.000e-36
Identity = 116/313 (37.06%), Postives = 163/313 (52.08%), Query Frame = 0 
Query:  588 SFYGVFDGHCGPVAAELAAAHLHRMVGARKKKF-VGGWEERKKLTEEECVARAKRALEDSFADMEALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEGRV----------EATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSRSFGDPTFKRYYSADAPSLMLRRHVSGTGMQEEEVNAGPPLPLPPEGFEPLVSPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVV-AEVFE-QHNTLGNAEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGF 888
            S   V+DGH G  A+E A      ++G  +    +    +  +LT+++ V + +  L D+FA ++A IL+  +   +R DGST +  ++ G +LFVANLGD R VLA       V           A RLSVDHKPD++EE +RV +AGG+V FSGCWRVAH  IP+RLA+SRS GD   K                               L LP     PLVS +P+V    +     FLVLASDG+WD +SD +A  +V A+V E Q +         T+ A++ AA  ++  AL K + DN T +V+ F
Sbjct:  224 SLLAVYDGHNGAYASEYARRRFKDLLGESEDLVEISRRAQHTELTDDD-VEKIRELLVDAFATVDAEILQRTVILNKR-DGSTVLLGLLVGGKLFVANLGDSRGVLAQTDESSEVSDGEDDEEVPSAVRLSVDHKPDLKEETERVEEAGGKVIFSGCWRVAHDQIPLRLAISRSLGDHPLK-------------------------------LNLPESCSAPLVSVIPDVRVLNVEAAGEFLVLASDGLWDRLSDDDAAKIVRAKVTEFQWSEEPTNSEDVTKEALQFAANALVEAALLKRSMDNITAMVISF 503
[Close]
BLAST of NO06G02010 vs. NCBI_GenBank
Match: POM73265.1 (Protein phosphatase 2C [Phytophthora palmivora var. palmivora])

HSP 1 Score: 162.5 bits (410), Expect = 5.900e-36
Identity = 118/314 (37.58%), Postives = 164/314 (52.23%), Query Frame = 0 
Query:  588 SFYGVFDGHCGPVAAELAAAHLHRMVGARKKKF-VGGWEERKKLTEEECVARAKRALEDSFADMEALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEGR-----------VEATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSRSFGDPTFKRYYSADAPSLMLRRHVSGTGMQEEEVNAGPPLPLPPEGFEPLVSPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVV-AEVFE-QHNTLGNAEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGF 888
            S   V+DGH G  A+E A      ++G  +    +    +  +LT+ + V + +  L D+FA ++A IL+  +   +R DGST +  ++ G +LFVANLGD R VLA QT E               A RLSVDHKPD++EE +RV +AGG+V FSGCWRVAH  IP+RLA+SRS GD   K                               L LP     PLVS +P+V    +     FLVLASDG+WD +SD +A  +V A+V E Q +         T+ A++ AA  ++  AL K + DN T +V+ F
Sbjct:  224 SLLAVYDGHNGAYASEYARRRFKDLLGESEDLVEISRRAQHTELTDND-VEKIRELLVDAFATVDAEILQRTVILNKR-DGSTVLLGLLVGGKLFVANLGDSRGVLA-QTDESSEXXXXXXDEEVPSAVRLSVDHKPDLKEETERVEEAGGKVIFSGCWRVAHDQIPLRLAISRSLGDHPLK-------------------------------LNLPESCSAPLVSVIPDVRVLNVEAAGEFLVLASDGLWDRLSDDDAAKIVRAKVTEFQWSEEPTNSEDVTKEALQFAANALVEAALLKRSMDNITAMVISF 503
The following BLAST results are available for this feature:
BLAST of NO06G02010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAY00302.11.100e-3938.36Hypothetical protein PINS_008170 [Pythium insidios... [more]
ETI31855.11.200e-3637.10hypothetical protein F443_21258 [Phytophthora para... [more]
ETI31856.11.200e-3637.10hypothetical protein, variant [Phytophthora parasi... [more]
XP_008914924.11.500e-3637.10hypothetical protein PPTG_18640 [Phytophthora para... [more]
XP_008914923.11.500e-3637.10hypothetical protein, variant [Phytophthora parasi... [more]
ETP29826.11.500e-3637.10hypothetical protein F442_21089 [Phytophthora para... [more]
ETP29827.11.500e-3637.10hypothetical protein, variant [Phytophthora parasi... [more]
KUF94710.11.500e-3637.10TIMELESS-interacting protein [Phytophthora nicotia... [more]
POM78061.12.000e-3637.06Protein phosphatase 2C [Phytophthora palmivora var... [more]
POM73265.15.900e-3637.58Protein phosphatase 2C [Phytophthora palmivora var... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02010.1NO06G02010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672422gene_6510Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02010.1NO06G02010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02010 ID=NO06G02010|Name=NO06G02010|organism=Nannochloropsis oceanica|type=gene|length=2673bp
ATGCAAGCGGCCAGAAGTGAGGGGCAAAGTTATCAGCAGCAGGCCCACCA
CATCTCCTCCTTCCATTCCCACCACCACTATCACCACCCACAGGATTGCT
CTAGAAACGATCACGCAACAGCGAGGAGAAGCGCGCAGGCACCTGGCGAT
ATGCCTCTGGAAGGGAGGGCCTACTCCCCAACCCCCAAAGAAGAGGACAG
GGAGGGAGGGAGGAGAGAGGGAGGGGAATATGGAAGGAAGCAACGAGGTC
GCAGCCCCAAACGTAGAGGTAGTCTTAGTGACCAGCACCGGTCGCCGTAC
TACCACGATAGGAAGGAGGGGAGGAAGGAAGAGGAGGAGAGGAAGAGGGA
GGGAGTGGGGGAGTGTCGGGGGGTAAGCTTCGAGGAGCACCAGCGGCAGC
AGCAGCAGCAGCAAAAGAAGAAAGAGGAGGAGGATGACCACCGACATCAT
TATTCCACTTCTTTAAGAGTAGTGGTTATGGTAGAGGAACAGCAGCAGCA
GCGCGAGCAGCAGCGGCGGCGTTGCAGCAATCACCATCAGCAGCAGCAGC
AGCAGCAGTGCCAGCAGCATCCGAACAACCTTTGCGACAAGGAAAAGCCG
CATTTCGATTACCACCATCACCACCACAATCATCATCATCATAATCAACA
GCAACGGCGAGAGCAGCAGCAGAAGTATTCTCGAAACCATCATCGAGGGC
GGGAGCGTGGAGAAAGGGAGGAGAGGGAAGGGGAGAGGATAGAAAGAGAG
GATAGTTGTGGTAAAGGAAAAGAAAAAGGAGAAGGAGGAGCAGACGGAGG
AGAAGGAAGAAATAGGGAACGAAGAGAAGAAAGACATACCAGGAATAGAA
GGAAGAAGGATAAACAAAAGAGAAGGAAGGCGAGGAAGAAGGAGAAAGAG
GAGAACGGGCATCATGTGGAGAAGAAGCACAGTCACAGTGAGAGGCAGGT
CACTTCATCACCTGCTACCGTCGTTGCTGCGGCTGCTACGCCTGGAAATA
AAAAAGAGAAGAAGATACAGGAAACGGACTCGTCCCCGAGCAGGTTCAAA
TGGGCCATGAAAGAGGTAGGCAAGCCCCACGAGCACGAGCACACAAAAAG
TCAAAAGATAGGTGACGGCAAGAAAAAGAAACGGAGCATCTTACTCAGTT
TCGGAGAAGAAATTGCCGATGAAGAGGTAGGAGCAGTGCAAAAGAAGGCG
AACCTTGACAGGGTGACAGCACAGCGAATGAAAACGGAACGCATCGAAGC
CATGCGTCTTTCGGGTAACGCTGCCGCCGCTGCTGCTGCAGCTGCTGCTG
CTCCTCCTCCTCCTCCTCGGCCTTCCGAAGTTGCTTCCATCCGGTCAGCC
AAAATGTCAGCGACTAGGACATCCACACCTTCTGGCACCTCCTCGTCTTT
CTCTTCCTCTTCCGTCTCCTCCCTCCGACTCATTGACCAAGACATGGATG
TCGTGTCTGGCGCTCAAGCCCCCTCGTCCACCATTGCAACCACCACTGCT
TCCTCCATCCATTTTTCCGCGTTCTCCTCCTCCAAACCCCCCTTATTGAT
GAAAGATGAGATGCGTCCTGCTCAAGCTCCGGTGTGTATAGCCCGAGCAG
CATCAACTCGAGGACCGAAAGCCGACATGGAGGACACGCACGTCATCGTC
GCCGCTCTAAAAAGGAGCGGTGATAGCAGCACTGTTCTCGATCCAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGCGGAATAGACGATGATG
CAGTCCCTGTGTCTTTCTATGGTGTGTTTGACGGCCATTGTGGACCCGTG
GCAGCCGAGCTTGCCGCTGCCCACCTTCACCGAATGGTAGGCGCACGAAA
AAAGAAATTTGTGGGTGGGTGGGAGGAAAGGAAGAAACTGACAGAGGAGG
AGTGTGTGGCACGAGCAAAGAGGGCTCTGGAGGACTCGTTCGCAGACATG
GAGGCGTTGATTTTGAAGGCCTTAATGGAGGAGGGGAGGAGGCAGGACGG
GTCCACGGCTATAGCTGCAGTTGTCGCTGGAGAGAGATTATTCGTGGCTA
ATCTGGGGGATTGTCGAGCAGTGCTTGCGACGCAGACACCCGAGGGGAGG
GTGGAAGCGACGAGGCTGTCAGTTGATCATAAGCCGGACGTGGAGGAAGA
AAAAAAGAGGGTTGGGAAGGCGGGGGGGAGAGTGGAGTTTTCGGGTTGTT
GGCGTGTGGCCCATTCGTCGATCCCCATGCGTTTGGCTGTGTCACGTAGT
TTTGGTGATCCTACATTCAAACGTTATTATAGTGCGGACGCGCCGTCACT
GATGCTGAGGAGGCATGTTAGTGGGACGGGGATGCAGGAGGAGGAGGTTA
ACGCAGGCCCCCCCTTGCCGTTGCCGCCTGAAGGATTTGAGCCTTTAGTA
TCGCCAGTACCGGAGGTAACGTACCACCGCCTGACGAGAGATGATCTGTT
TTTGGTGTTGGCTTCCGATGGTGTGTGGGATATGATGAGTGATTCTGAAG
CGATTCTTGTGGTTGCGGAAGTGTTTGAACAGCACAACACCCTCGGAAAC
GCTGAGGCGCCCTTTACGGAATTCGCGGTGAAAAAAGCGGCGGAGAGAGT
GATTGGTTTGGCGTTGAGTAAGGGAGCTTATGATAACTGTACGGTGTTGG
TCGTAGGTTTTCAGGTTCAATAA
back to top

protein sequence of NO06G02010.1

>NO06G02010.1-protein ID=NO06G02010.1-protein|Name=NO06G02010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=891bp
MQAARSEGQSYQQQAHHISSFHSHHHYHHPQDCSRNDHATARRSAQAPGD
MPLEGRAYSPTPKEEDREGGRREGGEYGRKQRGRSPKRRGSLSDQHRSPY
YHDRKEGRKEEEERKREGVGECRGVSFEEHQRQQQQQQKKKEEEDDHRHH
YSTSLRVVVMVEEQQQQREQQRRRCSNHHQQQQQQQCQQHPNNLCDKEKP
HFDYHHHHHNHHHHNQQQRREQQQKYSRNHHRGRERGEREEREGERIERE
DSCGKGKEKGEGGADGGEGRNRERREERHTRNRRKKDKQKRRKARKKEKE
ENGHHVEKKHSHSERQVTSSPATVVAAAATPGNKKEKKIQETDSSPSRFK
WAMKEVGKPHEHEHTKSQKIGDGKKKKRSILLSFGEEIADEEVGAVQKKA
NLDRVTAQRMKTERIEAMRLSGNAAAAAAAAAAAPPPPPRPSEVASIRSA
KMSATRTSTPSGTSSSFSSSSVSSLRLIDQDMDVVSGAQAPSSTIATTTA
SSIHFSAFSSSKPPLLMKDEMRPAQAPVCIARAASTRGPKADMEDTHVIV
AALKRSGDSSTVLDPGGGGGGGGGGGGGGIDDDAVPVSFYGVFDGHCGPV
AAELAAAHLHRMVGARKKKFVGGWEERKKLTEEECVARAKRALEDSFADM
EALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEGR
VEATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSRS
FGDPTFKRYYSADAPSLMLRRHVSGTGMQEEEVNAGPPLPLPPEGFEPLV
SPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVVAEVFEQHNTLGN
AEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGFQVQ*
back to top
Synonyms
Publications